******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXII:781450-781869 1.0000 100 chrX:157438-157538 1.0000 100 chrXIII:296759-298424 1.0000 100 chrIV:1150642-1151155 1.0000 100 chrXII:370643-370906 1.0000 100 chrXII:5426-5944 1.0000 100 chrIV:437517-438004 1.0000 100 chrVII:798517-798947 1.0000 100 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100 chrXIII:195881-196428 1.0000 100 chrIV:626442-626872 1.0000 100 chrV:13390-13514 1.0000 100 chrXIII:5285-5822 1.0000 100 chrXV:1025725-1026042 1.0000 100 chrXI:458364-458929 1.0000 100 chrXII:150034-150464 1.0000 100 chrV:434335-434821 1.0000 100 chrXIV:6485-6889 1.0000 100 chrXII:587405-587835 1.0000 100 chrXVI:856706-857103 1.0000 100 chrII:405644-406188 1.0000 100 chrXII:48694-49103 1.0000 100 chrX:415826-415926 1.0000 100 chrXI:308009-308403 1.0000 100 chrXI:426853-427283 1.0000 100 chrXII:818425-818819 1.0000 100 chrIII:140853-141283 1.0000 100 chrVIII:148945-149293 1.0000 100 chrVII:609489-609773 1.0000 100 chrVII:422881-423349 1.0000 100 chrXV:36183-36613 1.0000 100 chrVII:932281-932711 1.0000 100 chrXII:922104-922554 1.0000 100 chrIV:356469-356899 1.0000 100 chrX:523831-523931 1.0000 100 chrII:169323-169593 1.0000 100 chrIV:1302066-1302334 1.0000 100 chrX:390879-390979 1.0000 100 chrIV:358093-358432 1.0000 100 chrVII:799932-800362 1.0000 100 chrVII:401399-401811 1.0000 100 chrX:424329-424429 1.0000 100 chrXV:901551-901981 1.0000 100 chrIV:1326601-1327031 1.0000 100 chrV:99909-100378 1.0000 100 chrVII:438580-438911 1.0000 100 chrXII:687623-688156 1.0000 100 chrVII:788317-788763 1.0000 100 chrXV:332896-333326 1.0000 100 chrV:435629-436045 1.0000 100 chrXIII:123637-124067 1.0000 100 chrXV:620254-620489 1.0000 100 chrXIV:169809-169919 1.0000 100 chrVII:561414-561983 1.0000 100 chrVI:157732-158208 1.0000 100 chrIV:1524618-1524897 1.0000 100 chrXIII:650793-651104 1.0000 100 chrVI:149426-149856 1.0000 100 chrII:88943-89373 1.0000 100 chrXII:931024-931454 1.0000 100 chrX:212336-212436 1.0000 100 chrXI:158206-158606 1.0000 100 chrXII:1038740-1038925 1.0000 100 chrX:354049-354149 1.0000 100 chrIV:1450895-1451245 1.0000 100 chrXII:522160-522442 1.0000 100 chrXI:302667-303228 1.0000 100 chrXIV:241391-241734 1.0000 100 chrVII:727684-728064 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 579 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 57900 N= 579 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.309 C 0.191 G 0.191 T 0.309 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background): A 0.321 C 0.179 G 0.179 T 0.321 ******************************************************************************** ******************************************************************************** MOTIF GGCCVAGTKGKTWARGSSNHM MEME-1 width = 21 sites = 117 llr = 1851 E-value = 2.4e-359 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCCVAGTKGKTWARGSSNHM MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1:::391:::::4741::333 pos.-specific C :1783:::2::2::1:44234 probability G 99213:9:4a61:24866211 matrix T ::1111:a4:485:11::332 bits 2.5 * 2.2 * 2.0 * * * 1.7 ** * * Relative 1.5 ** * ** * *** Entropy 1.2 **** *** ** *** (22.8 bits) 1.0 **** *** ** *** 0.7 **** ******* * *** 0.5 **** ********* *** 0.2 ****************** * 0.0 --------------------- Multilevel GGCCCAGTGGGTTAAGGGAAC consensus A T T AGG CCTTA sequence G CC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCVAGTKGKTWARGSSNHM MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXVI:819297-819776 + 51 1.63e-11 ATGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXIV:602144-602484 + 56 1.63e-11 ATGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrIX:210468-210928 + 25 1.63e-11 CTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrVII:738883-739327 + 75 1.63e-11 TAGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCT chrV:443039-443501 - 27 1.63e-11 TTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrV:551131-551545 - 42 1.63e-11 CAGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrIX:183268-183710 - 46 1.63e-11 CTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXII:734625-735027 + 34 1.63e-11 TTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrIV:667791-668282 - 66 1.63e-11 TTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXVI:880104-880573 - 53 1.63e-11 ATGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXII:1051888-1052358 - 43 1.63e-11 ATGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXIV:560451-561017 - 53 8.74e-11 GGGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXV:353844-354306 - 60 8.74e-11 CTGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrIX:174832-175332 + 7 8.74e-11 TTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXV:113560-114011 + 75 8.74e-11 TAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTA chrIX:325530-326058 + 12 8.74e-11 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrVIII:115980-116390 - 16 8.74e-11 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXVI:689346-689848 + 26 8.74e-11 TGGGCACTAT GGCCGAGTGGTTAAGGCGACA GACTTGAAAT chrIV:434002-434587 - 64 8.74e-11 AAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrX:58974-59074 - 20 8.74e-11 AAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrII:266157-266689 + 13 8.74e-11 CTGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrX:617706-617806 + 53 1.08e-10 ATGGGAGTTT GGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrXII:592370-592834 - 39 1.08e-10 ATGGGAGTTT GGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrXII:731867-732298 + 66 1.08e-10 ATGGGAGTTT GGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrVII:561414-561983 - 67 2.35e-10 TTGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrX:523831-523931 - 47 2.35e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrIV:980822-981277 - 28 2.35e-10 GAGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrXIII:259025-259477 - 10 2.35e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAA chrI:182386-182828 - 18 2.35e-10 TTGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrV:86411-86827 + 43 2.35e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrVIII:132861-133386 - 6 2.35e-10 GTGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTA chrXII:167775-168248 - 36 2.35e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrIV:1305433-1305866 + 39 2.35e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrIV:437517-438004 + 70 2.35e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrVI:191289-191850 - 66 5.59e-10 CTGTCCCAGT GGCCGAGTGGTTAAGGCGATG CCCTGCTATT chrIV:1150642-1151155 - 65 5.59e-10 CAGTCCCAGT GGCCGAGTGGTTAAGGCGATG CCTGCTATTT chrX:424329-424429 - 11 1.22e-09 ATGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrXI:83978-84403 + 76 1.22e-09 ATGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGAC chrXII:962835-963304 - 8 1.22e-09 ACGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTA chrII:9353-9823 + 53 1.22e-09 GTGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrIV:519539-519953 + 55 1.22e-09 ACGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrVI:137262-137766 - 67 1.63e-09 CTGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXVI:810446-810899 + 62 1.63e-09 GCGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXV:228112-228553 + 57 1.63e-09 TAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrVII:730929-731436 + 13 1.63e-09 AAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXII:975839-976261 - 28 1.63e-09 AAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXIV:632393-632864 + 29 1.63e-09 GTGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXIV:102519-102953 + 38 1.63e-09 AAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrIII:127536-127901 + 56 1.63e-09 ATGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrVII:422881-423349 + 35 7.11e-09 GTGGTTGTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrXII:628158-628678 + 23 7.11e-09 GTGGTTGTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrVII:857248-857680 - 49 7.11e-09 GTGGTTGTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrIV:1461551-1462087 - 32 7.11e-09 GTGGTTGTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrXV:854004-854448 - 55 1.30e-08 CAGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrVII:794201-794636 + 57 1.30e-08 GCGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrXII:214720-215171 - 32 1.30e-08 TAGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrV:311874-312293 - 34 1.30e-08 CTGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrXVI:856706-857103 + 56 1.83e-08 TCGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrXI:219689-220127 + 45 1.83e-08 TAGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrVI:204779-205184 - 37 1.83e-08 TCGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrIV:410188-410564 + 61 1.83e-08 TTGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrXII:687623-688156 - 65 5.80e-08 TAGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXI:308009-308403 - 33 5.80e-08 GTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrVII:823255-823695 + 65 5.80e-08 GTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXV:663579-664126 - 55 5.80e-08 GTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrVII:73641-74124 - 42 5.80e-08 GTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrX:378154-378254 + 43 5.80e-08 TAGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrVIII:85166-85602 - 9 5.80e-08 TTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAAC chrXIII:420336-420882 - 74 5.80e-08 TTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrV:438498-438941 + 39 5.80e-08 TAGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXI:379482-379987 + 4 5.80e-08 CGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrVII:412133-412603 - 21 5.80e-08 CTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXV:438416-438967 + 10 1.03e-07 ATCCTTGTT AGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrVII:115279-115759 + 27 1.03e-07 CATCCTTGTT AGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrV:492175-492613 - 52 2.27e-07 TATTCCTCGT GGCCCAATGGTCACGGCGTCT GGCTACGAAC chrXIII:183749-184154 - 47 2.27e-07 AATAAAGATC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrIV:83338-83767 + 46 2.27e-07 AGTTCACTTA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrX:233699-233799 + 33 2.27e-07 TGTTCCTCGT GGCCCAATGGTCACGGCGTCT GGCTACGAAC chrVII:845435-845898 + 33 2.27e-07 TAAATAACAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXI:490741-491186 + 63 2.27e-07 TGTTCCTCGT GGCCCAATGGTCACGGCGTCT GGCTACGAAC chrVI:162012-162416 + 64 2.27e-07 AAGAAAACAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXV:281910-282394 + 62 2.27e-07 ACATGAAAGC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrIII:142588-142995 - 10 2.27e-07 AAGATTACTA GCGCAAGTGGTTTAGTGGTAA AATCCAACG chrXVI:572020-572534 + 42 2.27e-07 ACAATACTTC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrIV:992604-993029 + 66 2.27e-07 ACAATTGTGA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXVI:860180-860591 + 44 2.27e-07 TAAATAACAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrVII:930777-931264 - 33 2.27e-07 TAATCAGTAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrV:435629-436045 - 9 2.67e-07 GAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTA chrVII:876161-876692 + 26 2.67e-07 TAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrVII:122015-122526 + 57 2.67e-07 TAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrIX:300077-300548 - 10 2.67e-07 TAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAA chrV:135174-135711 - 77 2.67e-07 GTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrIV:1201502-1202007 + 54 2.67e-07 TAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrXI:202787-203282 + 23 2.67e-07 AAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrXVI:581870-582360 + 5 2.67e-07 TGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrVI:157732-158208 - 59 3.98e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrVIII:237687-238184 - 26 3.98e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrXVI:559985-560517 - 60 3.98e-07 GAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrXVI:622355-622841 - 55 3.98e-07 ATGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrVIII:358288-358797 - 49 3.98e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrII:36205-36593 + 57 3.98e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrXIII:195881-196428 - 46 5.80e-07 AAGTTCACAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXV:464220-464700 + 40 5.80e-07 AAGTTAACAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXII:92307-92839 + 25 5.80e-07 AAGTTAATAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXIV:546894-547355 + 20 5.80e-07 CGAAATAATC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrVI:101150-101640 + 31 5.80e-07 ACAATAATTC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXIII:837695-838192 + 43 8.31e-07 GACTCTCGGT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrVI:210442-210900 - 58 8.31e-07 GACTCTCGGT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrXIII:168567-169091 + 24 8.31e-07 CACTCTCGGT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrIII:123419-123821 - 58 8.31e-07 TTTCAAAGGA GGGCGTGTGGTCTAGAGGTAT GATTCTCGCT chrX:542753-542853 - 55 8.31e-07 TACTCTCGGT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrXV:287997-288393 + 55 8.31e-07 TTCTCTCGGT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrXIV:631701-632139 - 27 8.31e-07 AACTTCTACC GGGCGTGTGGTCTAGAGGTAT GATTCTCGCT chrXII:369804-369929 + 50 9.54e-07 GTTCTTTGGG GCTTCAGTGGTCAATGGGCAC CAGGTGGTGT chrII:326573-327099 - 51 2.47e-06 CGGGTCCAAT GGTCCAGTGGTTCAAGACGTC GCCTTTACAC chrIV:884170-884606 + 31 4.54e-06 ATGCTCGTGT AGCTCAGTGGTTAGAGCTTCG TGCTTATAGC chrVII:27-194 - 13 6.16e-06 GGGTAATGGA GGGTAAGTTGTGAGAAGGTTG ATCTGGGTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCVAGTKGKTWARGSSNHM MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:819297-819776 1.6e-11 50_[+1]_29 chrXIV:602144-602484 1.6e-11 55_[+1]_24 chrIX:210468-210928 1.6e-11 24_[+1]_55 chrVII:738883-739327 1.6e-11 74_[+1]_5 chrV:443039-443501 1.6e-11 26_[-1]_53 chrV:551131-551545 1.6e-11 41_[-1]_38 chrIX:183268-183710 1.6e-11 45_[-1]_34 chrXII:734625-735027 1.6e-11 33_[+1]_46 chrIV:667791-668282 1.6e-11 65_[-1]_14 chrXVI:880104-880573 1.6e-11 52_[-1]_27 chrXII:1051888-1052358 1.6e-11 42_[-1]_37 chrXIV:560451-561017 8.7e-11 52_[-1]_27 chrXV:353844-354306 8.7e-11 59_[-1]_20 chrIX:174832-175332 8.7e-11 6_[+1]_73 chrXV:113560-114011 8.7e-11 74_[+1]_5 chrIX:325530-326058 8.7e-11 11_[+1]_68 chrVIII:115980-116390 8.7e-11 15_[-1]_64 chrXVI:689346-689848 8.7e-11 25_[+1]_54 chrIV:434002-434587 8.7e-11 63_[-1]_16 chrX:58974-59074 8.7e-11 19_[-1]_60 chrII:266157-266689 8.7e-11 12_[+1]_67 chrX:617706-617806 1.1e-10 52_[+1]_27 chrXII:592370-592834 1.1e-10 38_[-1]_41 chrXII:731867-732298 1.1e-10 65_[+1]_14 chrVII:561414-561983 2.4e-10 66_[-1]_13 chrX:523831-523931 2.4e-10 46_[-1]_33 chrIV:980822-981277 2.4e-10 27_[-1]_52 chrXIII:259025-259477 2.4e-10 9_[-1]_70 chrI:182386-182828 2.4e-10 17_[-1]_62 chrV:86411-86827 2.4e-10 42_[+1]_37 chrVIII:132861-133386 2.4e-10 5_[-1]_74 chrXII:167775-168248 2.4e-10 35_[-1]_44 chrIV:1305433-1305866 2.4e-10 38_[+1]_41 chrIV:437517-438004 2.4e-10 69_[+1]_10 chrVI:191289-191850 5.6e-10 65_[-1]_14 chrIV:1150642-1151155 5.6e-10 64_[-1]_15 chrX:424329-424429 1.2e-09 10_[-1]_69 chrXI:83978-84403 1.2e-09 75_[+1]_4 chrXII:962835-963304 1.2e-09 7_[-1]_72 chrII:9353-9823 1.2e-09 52_[+1]_27 chrIV:519539-519953 1.2e-09 54_[+1]_25 chrVI:137262-137766 1.6e-09 66_[-1]_13 chrXVI:810446-810899 1.6e-09 61_[+1]_18 chrXV:228112-228553 1.6e-09 56_[+1]_23 chrVII:730929-731436 1.6e-09 12_[+1]_67 chrXII:975839-976261 1.6e-09 27_[-1]_52 chrXIV:632393-632864 1.6e-09 28_[+1]_51 chrXIV:102519-102953 1.6e-09 37_[+1]_42 chrIII:127536-127901 1.6e-09 55_[+1]_24 chrVII:422881-423349 7.1e-09 34_[+1]_45 chrXII:628158-628678 7.1e-09 22_[+1]_57 chrVII:857248-857680 7.1e-09 48_[-1]_31 chrIV:1461551-1462087 7.1e-09 31_[-1]_48 chrXV:854004-854448 1.3e-08 54_[-1]_25 chrVII:794201-794636 1.3e-08 56_[+1]_23 chrXII:214720-215171 1.3e-08 31_[-1]_48 chrV:311874-312293 1.3e-08 33_[-1]_46 chrXVI:856706-857103 1.8e-08 55_[+1]_24 chrXI:219689-220127 1.8e-08 44_[+1]_35 chrVI:204779-205184 1.8e-08 36_[-1]_43 chrIV:410188-410564 1.8e-08 60_[+1]_19 chrXII:687623-688156 5.8e-08 64_[-1]_15 chrXI:308009-308403 5.8e-08 32_[-1]_47 chrVII:823255-823695 5.8e-08 64_[+1]_15 chrXV:663579-664126 5.8e-08 54_[-1]_25 chrVII:73641-74124 5.8e-08 41_[-1]_38 chrX:378154-378254 5.8e-08 42_[+1]_37 chrVIII:85166-85602 5.8e-08 8_[-1]_71 chrXIII:420336-420882 5.8e-08 73_[-1]_6 chrV:438498-438941 5.8e-08 38_[+1]_41 chrXI:379482-379987 5.8e-08 3_[+1]_76 chrVII:412133-412603 5.8e-08 20_[-1]_59 chrXV:438416-438967 1e-07 9_[+1]_70 chrVII:115279-115759 1e-07 26_[+1]_53 chrV:492175-492613 2.3e-07 51_[-1]_28 chrXIII:183749-184154 2.3e-07 46_[-1]_33 chrIV:83338-83767 2.3e-07 45_[+1]_34 chrX:233699-233799 2.3e-07 32_[+1]_47 chrVII:845435-845898 2.3e-07 32_[+1]_47 chrXI:490741-491186 2.3e-07 62_[+1]_17 chrVI:162012-162416 2.3e-07 63_[+1]_16 chrXV:281910-282394 2.3e-07 61_[+1]_18 chrIII:142588-142995 2.3e-07 9_[-1]_70 chrXVI:572020-572534 2.3e-07 41_[+1]_38 chrIV:992604-993029 2.3e-07 65_[+1]_14 chrXVI:860180-860591 2.3e-07 43_[+1]_36 chrVII:930777-931264 2.3e-07 32_[-1]_47 chrV:435629-436045 2.7e-07 8_[-1]_71 chrVII:876161-876692 2.7e-07 25_[+1]_54 chrVII:122015-122526 2.7e-07 56_[+1]_23 chrIX:300077-300548 2.7e-07 9_[-1]_70 chrV:135174-135711 2.7e-07 76_[-1]_3 chrIV:1201502-1202007 2.7e-07 53_[+1]_26 chrXI:202787-203282 2.7e-07 22_[+1]_57 chrXVI:581870-582360 2.7e-07 4_[+1]_75 chrVI:157732-158208 4e-07 58_[-1]_21 chrVIII:237687-238184 4e-07 25_[-1]_54 chrXVI:559985-560517 4e-07 59_[-1]_20 chrXVI:622355-622841 4e-07 54_[-1]_25 chrVIII:358288-358797 4e-07 48_[-1]_31 chrII:36205-36593 4e-07 56_[+1]_23 chrXIII:195881-196428 5.8e-07 45_[-1]_34 chrXV:464220-464700 5.8e-07 39_[+1]_40 chrXII:92307-92839 5.8e-07 24_[+1]_55 chrXIV:546894-547355 5.8e-07 19_[+1]_60 chrVI:101150-101640 5.8e-07 30_[+1]_49 chrXIII:837695-838192 8.3e-07 42_[+1]_37 chrVI:210442-210900 8.3e-07 57_[-1]_22 chrXIII:168567-169091 8.3e-07 23_[+1]_56 chrIII:123419-123821 8.3e-07 57_[-1]_22 chrX:542753-542853 8.3e-07 54_[-1]_25 chrXV:287997-288393 8.3e-07 54_[+1]_25 chrXIV:631701-632139 8.3e-07 26_[-1]_53 chrXII:369804-369929 9.5e-07 49_[+1]_30 chrII:326573-327099 2.5e-06 50_[-1]_29 chrIV:884170-884606 4.5e-06 30_[+1]_49 chrVII:27-194 6.2e-06 12_[-1]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCVAGTKGKTWARGSSNHM MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCCVAGTKGKTWARGSSNHM width=21 seqs=117 chrXVI:819297-819776 ( 51) GGCCCAGTTGGTTAAGGCACC 1 chrXIV:602144-602484 ( 56) GGCCCAGTTGGTTAAGGCACC 1 chrIX:210468-210928 ( 25) GGCCCAGTTGGTTAAGGCACC 1 chrVII:738883-739327 ( 75) GGCCCAGTTGGTTAAGGCACC 1 chrV:443039-443501 ( 27) GGCCCAGTTGGTTAAGGCACC 1 chrV:551131-551545 ( 42) GGCCCAGTTGGTTAAGGCACC 1 chrIX:183268-183710 ( 46) GGCCCAGTTGGTTAAGGCACC 1 chrXII:734625-735027 ( 34) GGCCCAGTTGGTTAAGGCACC 1 chrIV:667791-668282 ( 66) GGCCCAGTTGGTTAAGGCACC 1 chrXVI:880104-880573 ( 53) GGCCCAGTTGGTTAAGGCACC 1 chrXII:1051888-1052358 ( 43) GGCCCAGTTGGTTAAGGCACC 1 chrXIV:560451-561017 ( 53) GGCCAAGTTGGTAAGGCGCCA 1 chrXV:353844-354306 ( 60) GGCCAAGTTGGTAAGGCGCCA 1 chrIX:174832-175332 ( 7) GGCCAAGTTGGTAAGGCGCCA 1 chrXV:113560-114011 ( 75) GGCCAAGTTGGTAAGGCGCCA 1 chrIX:325530-326058 ( 12) GGCCAAGTTGGTAAGGCGCCA 1 chrVIII:115980-116390 ( 16) GGCCAAGTTGGTAAGGCGCCA 1 chrXVI:689346-689848 ( 26) GGCCGAGTGGTTAAGGCGACA 1 chrIV:434002-434587 ( 64) GGCCAAGTTGGTAAGGCGCCA 1 chrX:58974-59074 ( 20) GGCCAAGTTGGTAAGGCGCCA 1 chrII:266157-266689 ( 13) GGCCAAGTTGGTAAGGCGCCA 1 chrX:617706-617806 ( 53) GGCCGAGTGGTTTAAGGCGTC 1 chrXII:592370-592834 ( 39) GGCCGAGTGGTTTAAGGCGTC 1 chrXII:731867-732298 ( 66) GGCCGAGTGGTTTAAGGCGTC 1 chrVII:561414-561983 ( 67) GGCCGAGTGGTTAAGGCGAAA 1 chrX:523831-523931 ( 47) GGCCGAGTGGTTAAGGCGAAA 1 chrIV:980822-981277 ( 28) GGCCGAGTGGTTAAGGCGAAA 1 chrXIII:259025-259477 ( 10) GGCCGAGTGGTTAAGGCGAAA 1 chrI:182386-182828 ( 18) GGCCGAGTGGTTAAGGCGAAA 1 chrV:86411-86827 ( 43) GGCCGAGTGGTTAAGGCGAAA 1 chrVIII:132861-133386 ( 6) GGCCGAGTGGTTAAGGCGAAA 1 chrXII:167775-168248 ( 36) GGCCGAGTGGTTAAGGCGAAA 1 chrIV:1305433-1305866 ( 39) GGCCGAGTGGTTAAGGCGAAA 1 chrIV:437517-438004 ( 70) GGCCGAGTGGTTAAGGCGAAA 1 chrVI:191289-191850 ( 66) GGCCGAGTGGTTAAGGCGATG 1 chrIV:1150642-1151155 ( 65) GGCCGAGTGGTTAAGGCGATG 1 chrX:424329-424429 ( 11) GGCCGAGTGGTCTAAGGCGGC 1 chrXI:83978-84403 ( 76) GGCCGAGTGGTCTAAGGCGGC 1 chrXII:962835-963304 ( 8) GGCCGAGTGGTCTAAGGCGGC 1 chrII:9353-9823 ( 53) GGCCGAGTGGTCTAAGGCGGC 1 chrIV:519539-519953 ( 55) GGCCGAGTGGTCTAAGGCGGC 1 chrVI:137262-137766 ( 67) GGCCAAGTTGGTTAAGGCGTG 1 chrXVI:810446-810899 ( 62) GGCCAAGTTGGTTAAGGCGTG 1 chrXV:228112-228553 ( 57) GGCCAAGTTGGTTAAGGCGTG 1 chrVII:730929-731436 ( 13) GGCCAAGTTGGTTAAGGCGTG 1 chrXII:975839-976261 ( 28) GGCCAAGTTGGTTAAGGCGTG 1 chrXIV:632393-632864 ( 29) GGCCAAGTTGGTTAAGGCGTG 1 chrXIV:102519-102953 ( 38) GGCCAAGTTGGTTAAGGCGTG 1 chrIII:127536-127901 ( 56) GGCCAAGTTGGTTAAGGCGTG 1 chrVII:422881-423349 ( 35) GGCCGAGCGGTCTAAGGCGCC 1 chrXII:628158-628678 ( 23) GGCCGAGCGGTCTAAGGCGCC 1 chrVII:857248-857680 ( 49) GGCCGAGCGGTCTAAGGCGCC 1 chrIV:1461551-1462087 ( 32) GGCCGAGCGGTCTAAGGCGCC 1 chrXV:854004-854448 ( 55) GGCGCAGTTGGTAGCGCGCTT 1 chrVII:794201-794636 ( 57) GGCGCAGTTGGTAGCGCGCTT 1 chrXII:214720-215171 ( 32) GGCGCAGTTGGTAGCGCGCTT 1 chrV:311874-312293 ( 34) GGCGCAGTTGGTAGCGCGCTT 1 chrXVI:856706-857103 ( 56) GGCGTAGTCGGTAGCGCGCTC 1 chrXI:219689-220127 ( 45) GGCGTAGTCGGTAGCGCGCTC 1 chrVI:204779-205184 ( 37) GGCGTAGTCGGTAGCGCGCTC 1 chrIV:410188-410564 ( 61) GGCGTAGTCGGTAGCGCGCTC 1 chrXII:687623-688156 ( 65) GGTCTAGTCGGTTATGGCATC 1 chrXI:308009-308403 ( 33) GGTCTAGTCGGTTATGGCATC 1 chrVII:823255-823695 ( 65) GGTCTAGTCGGTTATGGCATC 1 chrXV:663579-664126 ( 55) GGTCTAGTCGGTTATGGCATC 1 chrVII:73641-74124 ( 42) GGTCTAGTCGGTTATGGCATC 1 chrX:378154-378254 ( 43) GGTCTAGTCGGTTATGGCATC 1 chrVIII:85166-85602 ( 9) GGTCTAGTCGGTTATGGCATC 1 chrXIII:420336-420882 ( 74) GGTCTAGTCGGTTATGGCATC 1 chrV:438498-438941 ( 39) GGTCTAGTCGGTTATGGCATC 1 chrXI:379482-379987 ( 4) GGTCTAGTCGGTTATGGCATC 1 chrVII:412133-412603 ( 21) GGTCTAGTCGGTTATGGCATC 1 chrXV:438416-438967 ( 10) AGCTCAGTTGGTAGAGCGTTC 1 chrVII:115279-115759 ( 27) AGCTCAGTTGGTAGAGCGTTC 1 chrV:492175-492613 ( 52) GGCCCAATGGTCACGGCGTCT 1 chrXIII:183749-184154 ( 47) GCGCAAGTGGTTTAGTGGTAA 1 chrIV:83338-83767 ( 46) GCGCAAGTGGTTTAGTGGTAA 1 chrX:233699-233799 ( 33) GGCCCAATGGTCACGGCGTCT 1 chrVII:845435-845898 ( 33) GCGCAAGTGGTTTAGTGGTAA 1 chrXI:490741-491186 ( 63) GGCCCAATGGTCACGGCGTCT 1 chrVI:162012-162416 ( 64) GCGCAAGTGGTTTAGTGGTAA 1 chrXV:281910-282394 ( 62) GCGCAAGTGGTTTAGTGGTAA 1 chrIII:142588-142995 ( 10) GCGCAAGTGGTTTAGTGGTAA 1 chrXVI:572020-572534 ( 42) GCGCAAGTGGTTTAGTGGTAA 1 chrIV:992604-993029 ( 66) GCGCAAGTGGTTTAGTGGTAA 1 chrXVI:860180-860591 ( 44) GCGCAAGTGGTTTAGTGGTAA 1 chrVII:930777-931264 ( 33) GCGCAAGTGGTTTAGTGGTAA 1 chrV:435629-436045 ( 9) GGCGCAATCGGTAGCGCGTAT 1 chrVII:876161-876692 ( 26) GGCGCAATCGGTAGCGCGTAT 1 chrVII:122015-122526 ( 57) GGCGCAATCGGTAGCGCGTAT 1 chrIX:300077-300548 ( 10) GGCGCAATCGGTAGCGCGTAT 1 chrV:135174-135711 ( 77) GGCGCAATCGGTAGCGCGTAT 1 chrIV:1201502-1202007 ( 54) GGCGCAATCGGTAGCGCGTAT 1 chrXI:202787-203282 ( 23) GGCGCAATCGGTAGCGCGTAT 1 chrXVI:581870-582360 ( 5) GGCGCAATCGGTAGCGCGTAT 1 chrVI:157732-158208 ( 59) AGCTCAGTTGGGAGAGCGCCA 1 chrVIII:237687-238184 ( 26) AGCTCAGTTGGGAGAGCGCCA 1 chrXVI:559985-560517 ( 60) AGCTCAGTTGGGAGAGCGCCA 1 chrXVI:622355-622841 ( 55) AGCTCAGTTGGGAGAGCGCCA 1 chrVIII:358288-358797 ( 49) AGCTCAGTTGGGAGAGCGCCA 1 chrII:36205-36593 ( 57) AGCTCAGTTGGGAGAGCGCCA 1 chrXIII:195881-196428 ( 46) GGGCGTGTGGTCTAGTGGTAT 1 chrXV:464220-464700 ( 40) GGGCGTGTGGTCTAGTGGTAT 1 chrXII:92307-92839 ( 25) GGGCGTGTGGTCTAGTGGTAT 1 chrXIV:546894-547355 ( 20) GGGCGTGTGGTCTAGTGGTAT 1 chrVI:101150-101640 ( 31) GGGCGTGTGGTCTAGTGGTAT 1 chrXIII:837695-838192 ( 43) AGCCAAGTTGGTTTAAGGCGC 1 chrVI:210442-210900 ( 58) AGCCAAGTTGGTTTAAGGCGC 1 chrXIII:168567-169091 ( 24) AGCCAAGTTGGTTTAAGGCGC 1 chrIII:123419-123821 ( 58) GGGCGTGTGGTCTAGAGGTAT 1 chrX:542753-542853 ( 55) AGCCAAGTTGGTTTAAGGCGC 1 chrXV:287997-288393 ( 55) AGCCAAGTTGGTTTAAGGCGC 1 chrXIV:631701-632139 ( 27) GGGCGTGTGGTCTAGAGGTAT 1 chrXII:369804-369929 ( 50) GCTTCAGTGGTCAATGGGCAC 1 chrII:326573-327099 ( 51) GGTCCAGTGGTTCAAGACGTC 1 chrIV:884170-884606 ( 31) AGCTCAGTGGTTAGAGCTTCG 1 chrVII:27-194 ( 13) GGGTAAGTTGTGAGAAGGTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCVAGTKGKTWARGSSNHM MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 46320 bayes= 9.88311 E= 2.4e-359 -142 -1351 230 -1351 -1351 -93 234 -1351 -1351 204 -22 -153 -1351 210 -39 -177 -19 82 61 -132 155 -1351 -1351 -242 -177 -1351 234 -1351 -1351 -239 -1351 159 -1351 14 120 29 -1351 -1351 248 -1351 -1351 -1351 170 38 -1351 -6 -158 126 47 -438 -1351 77 114 -280 31 -291 32 -39 101 -165 -223 -1351 217 -132 -523 126 166 -1351 -1351 104 180 -523 -10 47 1 -23 -6 74 -106 -6 -6 117 -80 -77 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCVAGTKGKTWARGSSNHM MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 117 E= 2.4e-359 0.119658 0.000000 0.880342 0.000000 0.000000 0.094017 0.905983 0.000000 0.000000 0.735043 0.153846 0.111111 0.000000 0.769231 0.136752 0.094017 0.282051 0.316239 0.273504 0.128205 0.940171 0.000000 0.000000 0.059829 0.094017 0.000000 0.905983 0.000000 0.000000 0.034188 0.000000 0.965812 0.000000 0.196581 0.410256 0.393162 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.581197 0.418803 0.000000 0.170940 0.059829 0.769231 0.444444 0.008547 0.000000 0.547009 0.709402 0.025641 0.222222 0.042735 0.401709 0.136752 0.358974 0.102564 0.068376 0.000000 0.803419 0.128205 0.008547 0.427350 0.564103 0.000000 0.000000 0.367521 0.623932 0.008547 0.299145 0.247863 0.179487 0.273504 0.307692 0.299145 0.085470 0.307692 0.307692 0.401709 0.102564 0.188034 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCVAGTKGKTWARGSSNHM MEME-1 regular expression -------------------------------------------------------------------------------- GGCC[CAG]AGT[GT]G[GT]T[TA][AG][AG]G[GC][GC][ATC][ATC][CA] -------------------------------------------------------------------------------- Time 330.45 secs. ******************************************************************************** ******************************************************************************** MOTIF CYCHCDMBSGGRDTCGAACCSVKGAYC MEME-2 width = 27 sites = 73 llr = 1447 E-value = 1.9e-299 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYCHCDMBSGGRDTCGAACCSVKGAYC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 2:12244::3:54:::aa::13:27:: pos.-specific C 64645:433:::1:7:::a8642::57 probability G 2121232467a53::a::::3248::1 matrix T 152313:3::::2a3::::2114:252 bits 2.5 * * * 2.2 * * * 2.0 * * * 1.7 * * **** Relative 1.5 * ****** * Entropy 1.2 ** ******* * (28.6 bits) 1.0 **** ******** * ** 0.7 * ****** ******** ***** 0.5 *** * ****** ************** 0.2 ************ ************** 0.0 --------------------------- Multilevel CTCCCAAGGGGAATCGAACCCCGGACC consensus CTT GCTCA GG T TGATATT sequence A T C T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCHCDMBSGGRDTCGAACCSVKGAYC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrVII:876161-876692 - 62 3.48e-12 AAAAAGAAAG CCCTGTAGGGGGCTCGAACCCCTAACC TTATGATTAA chrV:135174-135711 + 35 3.48e-12 AAAAAGAAAG CCCTGTAGGGGGCTCGAACCCCTAACC TTATGATTAA chrXI:202787-203282 - 59 3.48e-12 AAAAAGAAAG CCCTGTAGGGGGCTCGAACCCCTAACC TTATGATTAA chrXVI:581870-582360 - 41 3.48e-12 AAAAAGAAAG CCCTGTAGGGGGCTCGAACCCCTAACC TTATGATTAA chrII:405644-406188 - 55 4.06e-12 AAACAAAGCA CTCACGATGGGGGTCGAACCCATAATC TTCTGATTAG chrXIII:131587-132096 + 36 4.06e-12 AAACAAAGCA CTCACGATGGGGGTCGAACCCATAATC TTCTGATTAG chrVII:828486-828990 + 37 4.06e-12 AAAAAAAGCA CTCACGATGGGGGTCGAACCCATAATC TTCTGATTAG chrIX:210468-210928 - 62 4.06e-12 AAAAAATATG GTCTCTAGCGGGATCGAACCGCTGATC CCCGCGTTAT chrVII:405269-405765 - 46 4.06e-12 AAAAAAAGCA CTCACGATGGGGGTCGAACCCATAATC TTCTGATTAG chrII:197255-197915 - 4 4.06e-12 CAAAAAAATG GTCTCTAGCGGGATCGAACCGCTGATC CCC chrVII:736128-736604 - 67 4.06e-12 AACAACA CTCACGATGGGGGTCGAACCCATAATC TTCTGATTAG chrIX:183268-183710 + 3 4.06e-12 TG GTCTCTAGCGGGATCGAACCGCTGATC CCCGCGTTAT chrXII:734625-735027 - 71 4.06e-12 ATG GTCTCTAGCGGGATCGAACCGCTGATC CCCGCGTTAT chrIV:667791-668282 + 23 4.06e-12 AATAAAAATG GTCTCTAGCGGGATCGAACCGCTGATC CCCGCGTTAT chrXVI:880104-880573 + 10 4.06e-12 AAAGAAATG GTCTCTAGCGGGATCGAACCGCTGATC CCCGCGTTAT chrV:138443-138993 - 41 4.06e-12 AAAAAAAACA CTCACGATGGGGGTCGAACCCATAATC TTCTGATTAG chrIV:568652-569207 - 46 4.06e-12 AAACAAAGCA CTCACGATGGGGGTCGAACCCATAATC TTCTGATTAG chrIII:123419-123821 + 9 1.72e-11 CAATGTGG GGCGAGCCGGGACTCGAACCCGGGACC TCCCGCACCC chrXI:140754-141322 + 32 2.94e-11 AATGAAAACT CCGATACGGGGAGTCGAACCCCGGTCT CCACGGTGAA chrXVI:209951-210490 + 24 2.94e-11 AAAGAAAACT CCGATACGGGGAGTCGAACCCCGGTCT CCACGGTGAA chrII:644985-645419 - 58 2.94e-11 AAAAATAACT CCGATACGGGGAGTCGAACCCCGGTCT CCACGGTGAA chrVII:328341-328968 - 22 2.94e-11 ACAAAAAACT CCGATACGGGGAGTCGAACCCCGGTCT CCACGGTGAA chrX:115755-115855 + 14 2.94e-11 AAAAAATACT CCGATACGGGGAGTCGAACCCCGGTCT CCACGGTGAA chrV:354698-355340 - 8 2.94e-11 AAAAAGTACT CCGATACGGGGAGTCGAACCCCGGTCT CCACGGT chrVII:541592-542176 - 59 2.94e-11 AAAGAACACT CCGATACGGGGAGTCGAACCCCGGTCT CCACGGTGAA chrV:487153-487591 + 11 2.94e-11 AACGAATACT CCGATACGGGGAGTCGAACCCCGGTCT CCACGGTGAA chrXI:46568-47000 + 3 3.82e-11 TG CCCTCTGTGGGAATTGAACCCACGATC CCCGCATTAC chrXI:578774-579280 - 55 9.12e-11 GTAAAGAACT CCTCATAGGGGGCTCGAACCCCTGACA TTTCGGTATC chrX:531603-531703 - 37 9.12e-11 AAAGAAACTG CGCAAGCCCGGAATCGAACCGGGGGCC CAACGATGGC chrXVI:768972-769506 + 20 9.12e-11 GTAAAGAACT CCTCATAGGGGGCTCGAACCCCTGACA TTTCGGTATC chrXV:438416-438967 - 69 9.12e-11 GAACT CCTCATAGGGGGCTCGAACCCCTGACA TTTCGGTATC chrIV:1075298-1075730 + 10 1.30e-10 AAACAAATG TTCCAACCGAGGATCGAACTCGGGACC TTTGCCGTGT chrIX:324093-324565 + 26 2.30e-10 AAAAAAATCT CCGCGACGGGGAATTGAACCCCGATCT GGCACGCGAC chrXIII:463337-463925 - 16 2.30e-10 AAAAAAATCT CCGCGACGGGGAATTGAACCCCGATCT GGCACGCGAC chrIV:488502-489081 + 58 2.30e-10 AAAGATTCTG ATCCAACCGAGGTTCGAACTCGGGATC TTCGCCGTGT chrII:326573-327099 + 8 2.30e-10 GAGTTTG ATCCAACCGAGGTTCGAACTCGGGATC TTCGCCGTGT chrX:541304-541404 - 64 2.30e-10 AAAAAAATCT CCGCGACGGGGAATTGAACCCCGATCT GGCACGCGAC chrXIV:560451-561017 + 11 2.57e-10 AAAAATTATG CTTCCAATCGGATTTGAACCGATGATC TCCACATTAC chrXV:353844-354306 + 18 2.57e-10 ACAAAAAATG CTTCCAATCGGATTTGAACCGATGATC TCCACATTAC chrIX:174832-175332 - 43 2.57e-10 AAAAAAATTG CTTCCAATCGGATTTGAACCGATGATC TCCACATTAC chrIX:325530-326058 - 48 2.57e-10 AAAAAAATTG CTTCCAATCGGATTTGAACCGATGATC TCCACATTAC chrIV:434002-434587 + 22 2.57e-10 TAAAAATATG CTTCCAATCGGATTTGAACCGATGATC TCCACATTAC chrII:266157-266689 - 49 2.57e-10 CAAAAAAATG CTTCCAATCGGATTTGAACCGATGATC TCCACATTAC chrXIV:104611-105181 - 3 2.57e-10 AAATAATATG CTTCCAATCGGATTTGAACCGATGATC TC chrI:166043-166635 - 22 3.97e-10 AAAAAATTTG GACGCAACCGGAATCGAACCGATGACC TCTTCCTTGC chrXV:854004-854448 + 13 3.97e-10 TTAAAAATTG GACGCAACCGGAATCGAACCGATGACC TCTTCCTTGC chrIV:1175610-1176179 - 29 4.41e-10 GGCAAAAATG CTCCAGGGGAGGTTCGAACTCTCGACC TTCAGATTAT chrXV:976206-976773 - 26 4.41e-10 AAAAATATTG CTCCAGGGGAGGTTCGAACTCTCGACC TTCAGATTAT chrX:422684-422784 - 58 4.41e-10 AGAAAATGTG CTCCAGGGGAGGTTCGAACTCTCGACC TTCAGATTAT chrXIII:572672-573177 + 11 4.41e-10 AAAAAATGTG CTCCAGGGGAGGTTCGAACTCTCGACC TTCAGATTAT chrV:250088-250546 - 62 7.39e-10 AATAAAAAAG GTCCTACCCGGATTCGAACCGGGGTTG TCCGGATCAA chrVI:137262-137766 + 24 9.96e-10 TAAAAAAACG ACCCCAGTGAGGGTTGAACTCACGATC TTGCGATTAA chrVII:730929-731436 - 50 9.96e-10 GCAAAAAACG ACCCCAGTGAGGGTTGAACTCACGATC TTGCGATTAA chrXIV:632393-632864 - 66 9.96e-10 AAAAAACG ACCCCAGTGAGGGTTGAACTCACGATC TTGCGATTAA chrVIII:388628-389215 + 24 1.76e-09 ATTATAATGG GGCGAGCTGGGAATTGAACCCAGGGCC TCTCGCATGC chrXIV:567893-568458 - 64 1.76e-09 AATATAAAGG GGCGAGCTGGGAATTGAACCCAGGGCC TCTCGCATGC chrV:130862-131368 + 19 1.94e-09 AAAAAAATAG GTCTTACCCGGATTCGAACCGGGGTTG TTCGGATCAA chrXII:687623-688156 + 22 2.78e-09 ATAAAAAATG ATTTCGCCCAGGATCGAACTGGGGACG TTCTGCGTGT chrXIV:96048-96507 + 16 2.78e-09 AAAAAATTTG AGCGGTACGAGAATCGAACCCGTGTCC CCACCTTGGA chrXV:663579-664126 + 12 2.78e-09 CTTAAAAACG ATTTCGCCCAGGATCGAACTGGGGACG TTCTGCGTGT chrXIII:420336-420882 + 31 2.78e-09 GATAAAAATG ATTTCGCCCAGGATCGAACTGGGGACG TTCTGCGTGT chrXI:379482-379987 - 41 2.78e-09 AAATTAATTG ATTTCGCCCAGGATCGAACTGGGGACG TTCTGCGTGT chrX:233699-233799 - 69 3.61e-09 ATTCT TCCCCGCCAGGACTCGAACCTGGAATC TCCTGGTTCG chrX:354049-354149 - 44 4.67e-09 TAAAAAAATC TCCCGGGGGCGAGTCGAACGCCCGATC TCAAGATTTC chrIV:946104-946646 - 47 4.67e-09 TAAAAAAATC TCCCGGGGGCGAGTCGAACGCCCGATC TCAAGATTTC chrV:492175-492613 + 10 1.22e-08 AATAATCCT TCCCCGCCAGGACTTGAACCTGGAATC TTCTGGTTCG chrXVI:744082-744564 - 54 3.53e-08 AAAAATTTTG CCACCTGTCAGAATTGAACTAACGACC TTTGCATTAC chrIV:1095134-1095649 + 31 5.55e-08 AATAAAAATG CGAACTCTGTGGATCGAACACAGGACC TCCAGATATC chrV:434335-434821 + 15 7.10e-08 AAAGAAAATG CCATCTCCTAGAATCGAACCAGGGTTT CATCGGCCAC chrXIII:362878-363335 - 51 7.10e-08 AAAGAAAATG CCATCTCCTAGAATCGAACCAGGGTTT CATCGGCCAC chrVII:110410-110906 + 19 7.10e-08 AAAAAAATTG CCATCTCCTAGAATCGAACCAGGGTTT CATCGGCCAC chrXIV:725875-726425 - 39 1.85e-07 GTTGGACGGT TGTCCGCGCGAGTTCGAACCTCGCATC CTTCAGTATT chrXVI:55855-56522 + 33 4.88e-07 AAATTAATTG AAACGGACAGGAATTGAACCTGCAACC CTTCGATTGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCHCDMBSGGRDTCGAACCSVKGAYC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:876161-876692 3.5e-12 61_[-2]_12 chrV:135174-135711 3.5e-12 34_[+2]_39 chrXI:202787-203282 3.5e-12 58_[-2]_15 chrXVI:581870-582360 3.5e-12 40_[-2]_33 chrII:405644-406188 4.1e-12 54_[-2]_19 chrXIII:131587-132096 4.1e-12 35_[+2]_38 chrVII:828486-828990 4.1e-12 36_[+2]_37 chrIX:210468-210928 4.1e-12 61_[-2]_12 chrVII:405269-405765 4.1e-12 45_[-2]_28 chrII:197255-197915 4.1e-12 3_[-2]_70 chrVII:736128-736604 4.1e-12 66_[-2]_7 chrIX:183268-183710 4.1e-12 2_[+2]_71 chrXII:734625-735027 4.1e-12 70_[-2]_3 chrIV:667791-668282 4.1e-12 22_[+2]_51 chrXVI:880104-880573 4.1e-12 9_[+2]_64 chrV:138443-138993 4.1e-12 40_[-2]_33 chrIV:568652-569207 4.1e-12 45_[-2]_28 chrIII:123419-123821 1.7e-11 8_[+2]_65 chrXI:140754-141322 2.9e-11 31_[+2]_42 chrXVI:209951-210490 2.9e-11 23_[+2]_50 chrII:644985-645419 2.9e-11 57_[-2]_16 chrVII:328341-328968 2.9e-11 21_[-2]_52 chrX:115755-115855 2.9e-11 13_[+2]_60 chrV:354698-355340 2.9e-11 7_[-2]_66 chrVII:541592-542176 2.9e-11 58_[-2]_15 chrV:487153-487591 2.9e-11 10_[+2]_63 chrXI:46568-47000 3.8e-11 2_[+2]_71 chrXI:578774-579280 9.1e-11 54_[-2]_19 chrX:531603-531703 9.1e-11 36_[-2]_37 chrXVI:768972-769506 9.1e-11 19_[+2]_54 chrXV:438416-438967 9.1e-11 68_[-2]_5 chrIV:1075298-1075730 1.3e-10 9_[+2]_64 chrIX:324093-324565 2.3e-10 25_[+2]_48 chrXIII:463337-463925 2.3e-10 15_[-2]_58 chrIV:488502-489081 2.3e-10 57_[+2]_16 chrII:326573-327099 2.3e-10 7_[+2]_66 chrX:541304-541404 2.3e-10 63_[-2]_10 chrXIV:560451-561017 2.6e-10 10_[+2]_63 chrXV:353844-354306 2.6e-10 17_[+2]_56 chrIX:174832-175332 2.6e-10 42_[-2]_31 chrIX:325530-326058 2.6e-10 47_[-2]_26 chrIV:434002-434587 2.6e-10 21_[+2]_52 chrII:266157-266689 2.6e-10 48_[-2]_25 chrXIV:104611-105181 2.6e-10 2_[-2]_71 chrI:166043-166635 4e-10 21_[-2]_52 chrXV:854004-854448 4e-10 12_[+2]_61 chrIV:1175610-1176179 4.4e-10 28_[-2]_45 chrXV:976206-976773 4.4e-10 25_[-2]_48 chrX:422684-422784 4.4e-10 57_[-2]_16 chrXIII:572672-573177 4.4e-10 10_[+2]_63 chrV:250088-250546 7.4e-10 61_[-2]_12 chrVI:137262-137766 1e-09 23_[+2]_50 chrVII:730929-731436 1e-09 49_[-2]_24 chrXIV:632393-632864 1e-09 65_[-2]_8 chrVIII:388628-389215 1.8e-09 23_[+2]_50 chrXIV:567893-568458 1.8e-09 63_[-2]_10 chrV:130862-131368 1.9e-09 18_[+2]_55 chrXII:687623-688156 2.8e-09 21_[+2]_52 chrXIV:96048-96507 2.8e-09 15_[+2]_58 chrXV:663579-664126 2.8e-09 11_[+2]_62 chrXIII:420336-420882 2.8e-09 30_[+2]_43 chrXI:379482-379987 2.8e-09 40_[-2]_33 chrX:233699-233799 3.6e-09 68_[-2]_5 chrX:354049-354149 4.7e-09 43_[-2]_30 chrIV:946104-946646 4.7e-09 46_[-2]_27 chrV:492175-492613 1.2e-08 9_[+2]_64 chrXVI:744082-744564 3.5e-08 53_[-2]_20 chrIV:1095134-1095649 5.6e-08 30_[+2]_43 chrV:434335-434821 7.1e-08 14_[+2]_59 chrXIII:362878-363335 7.1e-08 50_[-2]_23 chrVII:110410-110906 7.1e-08 18_[+2]_55 chrXIV:725875-726425 1.9e-07 38_[-2]_35 chrXVI:55855-56522 4.9e-07 32_[+2]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCHCDMBSGGRDTCGAACCSVKGAYC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYCHCDMBSGGRDTCGAACCSVKGAYC width=27 seqs=73 chrVII:876161-876692 ( 62) CCCTGTAGGGGGCTCGAACCCCTAACC 1 chrV:135174-135711 ( 35) CCCTGTAGGGGGCTCGAACCCCTAACC 1 chrXI:202787-203282 ( 59) CCCTGTAGGGGGCTCGAACCCCTAACC 1 chrXVI:581870-582360 ( 41) CCCTGTAGGGGGCTCGAACCCCTAACC 1 chrII:405644-406188 ( 55) CTCACGATGGGGGTCGAACCCATAATC 1 chrXIII:131587-132096 ( 36) CTCACGATGGGGGTCGAACCCATAATC 1 chrVII:828486-828990 ( 37) CTCACGATGGGGGTCGAACCCATAATC 1 chrIX:210468-210928 ( 62) GTCTCTAGCGGGATCGAACCGCTGATC 1 chrVII:405269-405765 ( 46) CTCACGATGGGGGTCGAACCCATAATC 1 chrII:197255-197915 ( 4) GTCTCTAGCGGGATCGAACCGCTGATC 1 chrVII:736128-736604 ( 67) CTCACGATGGGGGTCGAACCCATAATC 1 chrIX:183268-183710 ( 3) GTCTCTAGCGGGATCGAACCGCTGATC 1 chrXII:734625-735027 ( 71) GTCTCTAGCGGGATCGAACCGCTGATC 1 chrIV:667791-668282 ( 23) GTCTCTAGCGGGATCGAACCGCTGATC 1 chrXVI:880104-880573 ( 10) GTCTCTAGCGGGATCGAACCGCTGATC 1 chrV:138443-138993 ( 41) CTCACGATGGGGGTCGAACCCATAATC 1 chrIV:568652-569207 ( 46) CTCACGATGGGGGTCGAACCCATAATC 1 chrIII:123419-123821 ( 9) GGCGAGCCGGGACTCGAACCCGGGACC 1 chrXI:140754-141322 ( 32) CCGATACGGGGAGTCGAACCCCGGTCT 1 chrXVI:209951-210490 ( 24) CCGATACGGGGAGTCGAACCCCGGTCT 1 chrII:644985-645419 ( 58) CCGATACGGGGAGTCGAACCCCGGTCT 1 chrVII:328341-328968 ( 22) CCGATACGGGGAGTCGAACCCCGGTCT 1 chrX:115755-115855 ( 14) CCGATACGGGGAGTCGAACCCCGGTCT 1 chrV:354698-355340 ( 8) CCGATACGGGGAGTCGAACCCCGGTCT 1 chrVII:541592-542176 ( 59) CCGATACGGGGAGTCGAACCCCGGTCT 1 chrV:487153-487591 ( 11) CCGATACGGGGAGTCGAACCCCGGTCT 1 chrXI:46568-47000 ( 3) CCCTCTGTGGGAATTGAACCCACGATC 1 chrXI:578774-579280 ( 55) CCTCATAGGGGGCTCGAACCCCTGACA 1 chrX:531603-531703 ( 37) CGCAAGCCCGGAATCGAACCGGGGGCC 1 chrXVI:768972-769506 ( 20) CCTCATAGGGGGCTCGAACCCCTGACA 1 chrXV:438416-438967 ( 69) CCTCATAGGGGGCTCGAACCCCTGACA 1 chrIV:1075298-1075730 ( 10) TTCCAACCGAGGATCGAACTCGGGACC 1 chrIX:324093-324565 ( 26) CCGCGACGGGGAATTGAACCCCGATCT 1 chrXIII:463337-463925 ( 16) CCGCGACGGGGAATTGAACCCCGATCT 1 chrIV:488502-489081 ( 58) ATCCAACCGAGGTTCGAACTCGGGATC 1 chrII:326573-327099 ( 8) ATCCAACCGAGGTTCGAACTCGGGATC 1 chrX:541304-541404 ( 64) CCGCGACGGGGAATTGAACCCCGATCT 1 chrXIV:560451-561017 ( 11) CTTCCAATCGGATTTGAACCGATGATC 1 chrXV:353844-354306 ( 18) CTTCCAATCGGATTTGAACCGATGATC 1 chrIX:174832-175332 ( 43) CTTCCAATCGGATTTGAACCGATGATC 1 chrIX:325530-326058 ( 48) CTTCCAATCGGATTTGAACCGATGATC 1 chrIV:434002-434587 ( 22) CTTCCAATCGGATTTGAACCGATGATC 1 chrII:266157-266689 ( 49) CTTCCAATCGGATTTGAACCGATGATC 1 chrXIV:104611-105181 ( 3) CTTCCAATCGGATTTGAACCGATGATC 1 chrI:166043-166635 ( 22) GACGCAACCGGAATCGAACCGATGACC 1 chrXV:854004-854448 ( 13) GACGCAACCGGAATCGAACCGATGACC 1 chrIV:1175610-1176179 ( 29) CTCCAGGGGAGGTTCGAACTCTCGACC 1 chrXV:976206-976773 ( 26) CTCCAGGGGAGGTTCGAACTCTCGACC 1 chrX:422684-422784 ( 58) CTCCAGGGGAGGTTCGAACTCTCGACC 1 chrXIII:572672-573177 ( 11) CTCCAGGGGAGGTTCGAACTCTCGACC 1 chrV:250088-250546 ( 62) GTCCTACCCGGATTCGAACCGGGGTTG 1 chrVI:137262-137766 ( 24) ACCCCAGTGAGGGTTGAACTCACGATC 1 chrVII:730929-731436 ( 50) ACCCCAGTGAGGGTTGAACTCACGATC 1 chrXIV:632393-632864 ( 66) ACCCCAGTGAGGGTTGAACTCACGATC 1 chrVIII:388628-389215 ( 24) GGCGAGCTGGGAATTGAACCCAGGGCC 1 chrXIV:567893-568458 ( 64) GGCGAGCTGGGAATTGAACCCAGGGCC 1 chrV:130862-131368 ( 19) GTCTTACCCGGATTCGAACCGGGGTTG 1 chrXII:687623-688156 ( 22) ATTTCGCCCAGGATCGAACTGGGGACG 1 chrXIV:96048-96507 ( 16) AGCGGTACGAGAATCGAACCCGTGTCC 1 chrXV:663579-664126 ( 12) ATTTCGCCCAGGATCGAACTGGGGACG 1 chrXIII:420336-420882 ( 31) ATTTCGCCCAGGATCGAACTGGGGACG 1 chrXI:379482-379987 ( 41) ATTTCGCCCAGGATCGAACTGGGGACG 1 chrX:233699-233799 ( 69) TCCCCGCCAGGACTCGAACCTGGAATC 1 chrX:354049-354149 ( 44) TCCCGGGGGCGAGTCGAACGCCCGATC 1 chrIV:946104-946646 ( 47) TCCCGGGGGCGAGTCGAACGCCCGATC 1 chrV:492175-492613 ( 10) TCCCCGCCAGGACTTGAACCTGGAATC 1 chrXVI:744082-744564 ( 54) CCACCTGTCAGAATTGAACTAACGACC 1 chrIV:1095134-1095649 ( 31) CGAACTCTGTGGATCGAACACAGGACC 1 chrV:434335-434821 ( 15) CCATCTCCTAGAATCGAACCAGGGTTT 1 chrXIII:362878-363335 ( 51) CCATCTCCTAGAATCGAACCAGGGTTT 1 chrVII:110410-110906 ( 19) CCATCTCCTAGAATCGAACCAGGGTTT 1 chrXIV:725875-726425 ( 39) TGTCCGCGCGAGTTCGAACCTCGCATC 1 chrXVI:55855-56522 ( 33) AAACGGACAGGAATTGAACCTGCAACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCHCDMBSGGRDTCGAACCSVKGAYC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 42846 bayes= 10.9938 E= 1.9e-299 -109 172 -1 -197 -297 120 -90 49 -197 165 -25 -64 -46 125 -112 -30 -74 154 -25 -123 26 -1283 94 -23 40 125 -25 -1283 -1283 62 125 -9 -297 88 172 -297 -30 -271 197 -455 -455 -1283 246 -1283 66 -1283 146 -1283 20 -38 62 -55 -1283 -1283 -1283 164 -1283 205 -1283 -30 -1283 -1283 248 -1283 164 -1283 -1283 -1283 164 -1283 -1283 -1283 -1283 248 -1283 -1283 -455 207 -271 -64 -255 172 75 -255 3 105 46 -255 -1283 -12 125 36 -46 -370 207 -1283 118 -1283 -212 -46 -1283 150 -1283 62 -297 194 -112 -74 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCHCDMBSGGRDTCGAACCSVKGAYC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 73 E= 1.9e-299 0.150685 0.589041 0.178082 0.082192 0.041096 0.410959 0.095890 0.452055 0.082192 0.561644 0.150685 0.205479 0.232877 0.424658 0.082192 0.260274 0.191781 0.520548 0.150685 0.136986 0.383562 0.000000 0.342466 0.273973 0.424658 0.424658 0.150685 0.000000 0.000000 0.273973 0.424658 0.301370 0.041096 0.328767 0.589041 0.041096 0.260274 0.027397 0.698630 0.013699 0.013699 0.000000 0.986301 0.000000 0.506849 0.000000 0.493151 0.000000 0.369863 0.136986 0.273973 0.219178 0.000000 0.000000 0.000000 1.000000 0.000000 0.739726 0.000000 0.260274 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.013699 0.753425 0.027397 0.205479 0.054795 0.589041 0.301370 0.054795 0.328767 0.369863 0.246575 0.054795 0.000000 0.164384 0.424658 0.410959 0.232877 0.013699 0.753425 0.000000 0.726027 0.000000 0.041096 0.232877 0.000000 0.506849 0.000000 0.493151 0.041096 0.684932 0.082192 0.191781 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCHCDMBSGGRDTCGAACCSVKGAYC MEME-2 regular expression -------------------------------------------------------------------------------- C[TC][CT][CTA]C[AGT][AC][GTC][GC][GA]G[AG][AGT]T[CT]GAAC[CT][CG][CAG][GT][GA][AT][CT]C -------------------------------------------------------------------------------- Time 622.67 secs. ******************************************************************************** ******************************************************************************** MOTIF ACAYCCRTACAYY MEME-3 width = 13 sites = 143 llr = 1606 E-value = 2.1e-196 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACAYCCRTACAYY MEME-3 Description -------------------------------------------------------------------------------- Simplified A 619:::5:8:9:1 pos.-specific C 19:7a9:2:a145 probability G 2:::::4:2:::: matrix T 1::3:1:7:::63 bits 2.5 * 2.2 * * 2.0 * * 1.7 * ** * Relative 1.5 * ** * Entropy 1.2 ***** ** (16.2 bits) 1.0 ***** **** 0.7 *********** 0.5 ************* 0.2 ************* 0.0 ------------- Multilevel ACACCCATACATC consensus T GCG CT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAYCCRTACAYY MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------- chrX:690467-690567 + 83 3.59e-09 GGTCATCAAC ACACCCGTACACC ACCAT chrIV:221953-222328 - 45 3.59e-09 GACGGTTACC ACACCCGTACACC CTTATCTCAT chrVIII:382916-383363 - 12 3.40e-08 AACATCCGAT ACACCCATACATC ATGAAAATAA chrXIV:6485-6889 + 3 6.20e-08 CC ACACCCACACACC CACACCACAC chrXIII:5285-5822 + 72 6.20e-08 CCCACACACC ACACCCACACACC CTAACACAAT chrIII:30-568 + 36 6.20e-08 CACCCACACC ACACCCACACACC ACACCCACAC chrV:6141-6584 + 37 6.20e-08 ACCCACACCC ACACCCACACACC ATGCTCACCT chrIV:48-324 + 1 6.20e-08 . ACACCCACACACC ACACACTACC chrVI:4428-4987 + 62 6.20e-08 CCACACACCC ACACCCACACACC ACACCCACAC chrVIII:562232-562635 - 83 6.20e-08 CACCC ACACCCACACACC ACACCCACAC chrXI:666418-666812 - 47 6.20e-08 CACCCACACC ACACCCACACACC CACAACCCTA chrXII:11018-11545 + 38 6.20e-08 CACACACACC ACACCCACACACC ACACCCACAC chrXII:1064844-1065364 - 39 6.20e-08 CACACCCACC ACACCCACACACC ACACACACAC chrXII:5426-5944 + 31 6.20e-08 TATATACACC ACACCCACACACC ACACCCACAC chrX:157438-157538 - 11 6.20e-08 CAATGTGTTT ACACCCGTACACT TTATACATCC chrXIII:650793-651104 + 83 1.07e-07 AGACTGTTTT ACACCCGTACATT TCACA chrVII:10103-10533 + 61 1.28e-07 TTTAAACAGT GCACCCGTGCATC ATACCTCATG chrIV:229450-229795 + 82 1.28e-07 CTTACACAAA ACATCCGTACATC AGAAGG chrXII:932067-932513 - 27 1.28e-07 ATACATCCGT ACATCCGTACATC CGTACATCTG chrXI:431319-431669 + 50 1.43e-07 CAGCGCAAAT ACACCCATACACT ATTTTTACAT chrXIII:145886-146286 + 48 1.75e-07 GCATTTTTGT ACATCCATACACC ATACACCATA chrII:89654-89953 - 48 1.75e-07 TTGTGACTTT ACATCCATACACC CTCTTTAACA chrIV:1355716-1356022 - 20 2.13e-07 GGTTAAAATT ACACCCATACATT TATAGTATTT chrVIII:125917-126312 + 38 2.13e-07 AGACGTTAAT GCATCCGTACACC TACATCTTTA chrI:81909-82272 - 70 2.13e-07 AACTGTTGGT ACATCCGTGCACC TCCGCTAGAT chrIV:1062896-1063088 - 15 2.80e-07 AAAATAAATA GCACCCACACATC GCATGATGGC chrX:703268-703368 - 48 2.80e-07 ACGCGTGGAA GCACCCATGCATC CACTATTTAT chrVII:555313-555702 + 53 2.80e-07 CATCCCTTTT ACACCCGTGCATT AAAGGTGTTT chrXII:710675-710863 + 14 2.80e-07 AGCAGGAATC ACACCCACGCATC TCATTTTGCG chrV:13390-13514 + 31 3.11e-07 TAAGGAAATG ACACCCATACCTC TCAGAAATCC chrXIII:731997-732417 + 49 3.11e-07 AAGACATAAT ACATCCGCACATC GCGCATGTGT chrXII:922104-922554 + 66 3.48e-07 TTTGAAATTG ACACCCGTACATA TTCCAATTCT chrXV:79756-80122 - 59 3.48e-07 CTCCATGTAA ACACCCGTACATA TTAAATAAGT chrVI:64906-65359 - 85 3.48e-07 TCA ACACCCGTACATA TTCAGAGATA chrXIV:783836-784185 - 77 3.48e-07 CACACACACC ACACCCACACACT ACCCTAACAC chrVII:149117-149548 - 36 3.93e-07 TGTGCTTACA GCATCCATACACC CACCCATACA chrIII:163447-163879 - 34 3.93e-07 TTAAATTACC GCACCCACGCACC CAACCGCGGC chrV:396176-396572 + 55 3.93e-07 CCTGTTGTAT ACATCCGTACACT TTTGTGAACC chrII:181352-181636 + 51 4.59e-07 CCTTTACAAA GCACCCATACATT ACATTGAATA chrII:415503-415869 - 47 4.59e-07 TTCCTTTTTT ACACCCATGCATT TTGTCATCCA chrIV:411271-411641 + 29 4.59e-07 AACAAATCAA ACACCCACACCCC GGGCACCCAA chrXV:94475-94846 + 25 4.59e-07 AATAGAATTA ACACCCATGCATT ATTGTCTTCG chrXII:650979-651259 + 71 4.59e-07 AATTATCTCA ACACCCACACATT TCTCATGGTA chrV:305704-306212 + 77 4.59e-07 TCGGGACTGT ACACCCACACATT TACAAGCCCA chrIV:539025-539174 + 56 4.59e-07 ATGAATTATC ACACCCACACCCC TCATTCAATC chrIX:68186-68527 + 44 5.58e-07 TGAGTTTATT ACATCCGTACATT ACTAAGATGT chrXIII:225326-225737 + 64 5.58e-07 TCCGTGCATT ACATCCGTACATT CTATTTTTTA chrII:592899-593291 - 40 5.58e-07 CTCTTTTCTT GCATCCATACATC TTTGAACTCC chrXVI:378654-379029 - 49 5.58e-07 TTCAGAGAAA ACATCCGTACATT CGAGTTCTCA chrXVI:76353-76728 - 53 7.59e-07 GACTGTATTT TCACCCGTACATC CACGGATGTG chrIV:1300931-1301343 + 22 7.59e-07 TTTCCTTCAA ACATCCGTGCACT GTGGATGTTT chrVII:726416-726779 + 40 7.59e-07 AATTAACTGT ACACCCATACCCT ATATACACCC chrIV:358093-358432 - 37 8.87e-07 GGTGTACACA CCACCCATACATT ATCTGACAAG chrV:85124-85458 + 59 8.87e-07 GTGATATCAT CCACCCATACCCC TCGATGTATT chrII:477010-477451 + 54 8.87e-07 CATTCATGTT GCACCCACACATT TATACACCCA chrIX:254239-254549 - 14 8.87e-07 GCGAGCTTCC GCACCCACACATT CTAATTGCCG chrIV:835753-836209 + 20 8.87e-07 AACGGCGCGC ACACCCACGCCCC GCAACCGCAC chrXII:522160-522442 + 52 1.02e-06 TATTAACTAA ACATCCGTACACA AAAGGTTTTC chrXV:1028626-1029179 - 55 1.02e-06 TTACCATTGT GCATCCGTACATT TGATTTGTTT chrXVI:731913-732335 + 30 1.02e-06 CATCGTCAGT ACACCCATACCTT TAGGATGGTT chrII:44990-45347 + 52 1.02e-06 AGACAATCAT GCATCCGTACATT CTATGTATGT chrX:607831-607931 + 52 1.02e-06 TGCCAACCCT CCATCCATACATC CTTTTTAACC chrIV:130578-130979 - 21 1.02e-06 ACATATACAA ACATCCGCACATT TTATAGCTTT chrV:53531-53966 + 21 1.14e-06 TCTTTGTTTG ACACCCACACATA TTTGGTGTTC chrXII:282498-282873 + 22 1.14e-06 GTGCTTTTTT ACACCTGTACATC TTTTCCCTCC chrII:605710-606120 + 51 1.14e-06 TGACAGTTTT ACACCTGTACATC TTCACCATCA chrXII:241585-242006 + 62 1.27e-06 TTCCCTTTTT ACATCCGTACATA TAAAATGTAA chrVII:254092-254552 - 75 1.27e-06 ATTTGAGGTT GCACCCGTGCATA TTGAAAGATG chrV:110502-110815 + 70 1.27e-06 TGTGACAAAC ACACCCAGACACC TCAATAGACA chrXIII:754417-754807 - 10 1.27e-06 AACATAAAAT ACCCCCATACATC CAGAATAGC chrVIII:505817-506211 - 37 1.56e-06 AGACAATTAT GCATCCATACATT TCACCCAGAC chrVIII:148945-149293 - 13 1.74e-06 CCATACATTT TCACCCATGCACC ATTGGATTAT chrV:140460-140878 - 56 1.74e-06 GACGCACAAA GCACCCATACCTT TTACAATGCC chrIV:341257-341632 - 49 1.74e-06 GTCTACTTTT CCATCCGTACATT TTAACACCCA chrXII:1028186-1028575 + 68 1.74e-06 AGACAAAATA TCACCCATGCACC AAAATGTATG chrVII:534757-535268 - 42 1.74e-06 TTTTATATAT GCATCCGTGCATT TGTGTAACCC chrXII:781450-781869 - 47 1.74e-06 TAGAGAAAAT GCATCCGTGCATT TTCATAAACC chrX:75324-75424 - 37 1.94e-06 ATTCCTCTAT ACATCCACACCTC ACTATTTGAA chrXVI:406191-406559 + 46 1.94e-06 ATGAAGTTTA ACATCCGTACCTT TCCACCTCCA chrV:423094-423472 + 39 1.94e-06 CTGCATATTT ACCTCCGTACACC TTCTACACCC chrIV:321664-321965 + 35 1.94e-06 TCATACCTTT ACCTCCGTACACC AATCTTTATT chrVII:788317-788763 - 39 2.14e-06 ATTCCTTACA ACATCCGTGCATA CTCTAAACCC chrVI:221743-222093 - 52 2.14e-06 AAGACTTTTT TCACCCGTACATT TTTAACACCC chrXIV:444456-444794 - 46 2.14e-06 TCTACGGTCT CCATCCGTACCTC TTTAAATCCG chrXII:796407-796892 - 35 2.14e-06 TCTATCTTTT GCATCCGTGCCTC CTGGATAATA chrXVI:188614-188942 + 62 2.33e-06 GTGACTTTTA AAACCCATGCATC GGTTACTATG chrXV:167958-168463 - 28 2.33e-06 GCGGCTTTAA ACACCCGTGCCTA TATTTAAGTT chrVII:438580-438911 - 63 2.60e-06 AAAGACCTTA CCATCCATACATT TTGGAACGTT chrXV:1025725-1026042 + 43 2.60e-06 CATATGCTGA ACACCCATTCATC ACGTGTAATT chrVII:310467-310920 + 43 2.60e-06 AACCAATGTA ACATCTGTACACC AGGGACCCAC chrII:60798-61289 - 80 2.60e-06 CTACATTA ACATCTGTACACC CCCAACTGCT chrIX:257363-257740 + 32 2.60e-06 GTATGTGACG ACATCTGTACACC GCAAAGTTGT chrXV:1004039-1004400 - 78 2.60e-06 AAAAAAAAAA ACACCCTTGCACC CATAACATAC chrXV:216237-216675 + 53 3.20e-06 GAACATCCGA GCACCCGCGCCTT CCTCAACCCA chrIV:1401244-1401596 + 63 3.20e-06 CAATCATTTT CCACCCACACATA TATTACCCTT chrXV:968121-968409 - 54 3.53e-06 CGAGCAGCGC ACGCCCACGCACC CCACGCTTTT chrXI:618807-619222 - 47 3.53e-06 AATACTATTT CCATCCGTGCCTC TAATAGATTT chrXII:897692-898034 + 48 3.53e-06 GAATTCTACA ACACCTGTACCTC CAAAAAACCC chrXIV:499313-499619 - 17 3.91e-06 CTTGGAAACA ACACCAGTGCACC ACATGAGTTT chrXVI:281553-281907 + 86 3.91e-06 TTACCTCTTT ACACCCTTACACT TC chrIV:217136-217553 + 20 3.91e-06 GCCCTGCTTT GAACCCGTACATT TTATTCTATA chrX:391881-391981 + 62 4.78e-06 CACACGCCCC ACACCCAGACCTC CCTGCGAGCG chrXI:313263-313687 + 71 5.23e-06 GTTTTTGGTT ACATCTGCACATC TGGTTGAATA chrIV:1450895-1451245 - 63 5.77e-06 TTAGACATTA ACACCTGTACATA TTTGTATTTT chrIX:316109-316595 + 50 5.77e-06 TTTCAGACTA GAACCCATACATT ATTTTACAAA chrXV:505113-505506 + 35 5.77e-06 CATTCATTTC AAACCCATACACA ATGAACCTTA chrVII:648932-649410 - 13 5.77e-06 CGTACAACGA GAACCCATACATT ACTTTTTTTA chrXIII:124329-124741 - 28 6.37e-06 GACTGCTATT AAATCCGTACATT ATTAAAATGT chrIX:99636-100030 - 27 7.02e-06 ACACCATGTA ACACCAGTACATT TATTCATGAA chrII:604120-604502 + 40 7.68e-06 GTACATTTAC ACATCTGTACATT TTTCATATTC chrVIII:296884-297224 + 53 7.68e-06 ACAATTTCGT CCACCAGTACATC ACAGCATGCT chrXIV:63106-63583 - 24 9.17e-06 ATACTACTTT ACATCCGAACATT TTAGCAACCC chrXII:48694-49103 - 55 1.01e-05 ATCCCAATGA AGATCCGTACATC TTAGACACCC chrX:651224-651324 + 59 1.42e-05 TTATACAACA ACACCCATATACC CATAATTATT chrII:332290-332748 + 56 1.42e-05 TTTCCTTGCT GCACCCATACAAT TCTAAACCCA chrIV:579045-579395 + 36 1.42e-05 AAGCCTTTTA CCACCCATAAACC ATAAAGTAGA chrXI:158206-158606 + 44 1.55e-05 TCATTTATTT CAACCCGTGCACA CTGGAAATAA chrXV:253803-254119 - 67 1.70e-05 AAAACTTTTT TAATCCGTACACC GCGCGTATAA chrXV:866553-866946 - 57 1.70e-05 AACCGGTGTA ACACCCATACAAA CCCAGAATGC chrXVI:520167-520534 + 64 1.83e-05 CCTGAGTGTT CCACCCAGGCCTC GCCGGAGGAA chrIII:178321-178719 + 20 1.96e-05 GATGTTTATT AAGTCCGTACACC GCACGTAAGT chrIV:308012-308382 + 77 2.12e-05 ATTTCCTGTT ACATCCTTACATA TATGCAGGCA chrXII:370643-370906 - 62 2.12e-05 CGCACTTCGC CCACCCATGAACC ACACGGTTAG chrXV:81132-81562 - 10 2.30e-05 AGGCACAGGA AACCCCGTGCACT CTGCCACTA chrIV:117112-117586 + 71 2.30e-05 TATTAATCTC AGACCCATACATA TCTACACCCA chrXVI:280772-281320 + 83 2.50e-05 CCATTTGTAC CCACCCATGAATC CCTAT chrXIV:241391-241734 + 51 2.68e-05 CCAACATCCA GCACCTAAACACC ATCAATACAC chrXIII:551362-551797 + 74 2.88e-05 TATTACTTAA ACATCAGTACATA TTGGCACCCA chrXV:978814-979131 - 16 3.09e-05 CGGTGTCGTA GAACCCATTCATC CTTGTGTATA chrXII:1018977-1019388 - 11 3.61e-05 GGAAACGTTG AAACCCAAACATT AATATATTTT chrX:90064-90164 + 45 3.61e-05 TTTTCAATTT GCACCTGGACATT CTCACCCATA chrXV:281910-282394 - 31 3.86e-05 GTTATCCTGA GCATCCACTCCTC TATTTAAGCG chrV:354698-355340 - 60 4.14e-05 GGTGGCTCCT AACCCCATACATA CACTGTATGA chrXII:587405-587835 + 44 4.42e-05 ATGTGTATAT ACGTCTATGCACC TACCTACTTA chrXIV:169809-169919 - 5 4.75e-05 GTTAGGCAAG ACACCTATACATG GTTA chrII:167890-168206 + 54 4.75e-05 GACATATTTT TCACCAGTACCTC TTGGAAAACG chrIV:490924-491287 + 76 5.45e-05 CTATTTTATT ACACCCAATCATT CAGGAAAAAA chrII:165110-165398 + 53 6.24e-05 ATTACGAATC TAGCCCATACACC GCGTTAGAGC chrVII:479247-479977 - 73 6.69e-05 TTAGCTTCAC ACACACACACACA CCGAAGCTGG chrVIII:103881-104280 + 27 8.16e-05 AGACGGTTTT CAGCCCACACATT TTTTGTTATT chrXI:108679-109088 + 70 9.30e-05 AAGACTATTA TCATCCAAACACA TTACAACATC chrIII:124126-124556 + 38 1.12e-04 ATTACATTAT CAATCCTTACACT TCAGCTTCCT chrII:232513-232943 - 57 1.19e-04 AGTGTTTTAA GACTCCGTGCATA CTCTTTAATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAYCCRTACAYY MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:690467-690567 3.6e-09 82_[+3]_5 chrIV:221953-222328 3.6e-09 44_[-3]_43 chrVIII:382916-383363 3.4e-08 11_[-3]_76 chrXIV:6485-6889 6.2e-08 2_[+3]_85 chrXIII:5285-5822 6.2e-08 71_[+3]_16 chrIII:30-568 6.2e-08 35_[+3]_52 chrV:6141-6584 6.2e-08 36_[+3]_51 chrIV:48-324 6.2e-08 [+3]_87 chrVI:4428-4987 6.2e-08 61_[+3]_26 chrVIII:562232-562635 6.2e-08 82_[-3]_5 chrXI:666418-666812 6.2e-08 46_[-3]_41 chrXII:11018-11545 6.2e-08 37_[+3]_50 chrXII:1064844-1065364 6.2e-08 38_[-3]_49 chrXII:5426-5944 6.2e-08 30_[+3]_57 chrX:157438-157538 6.2e-08 10_[-3]_77 chrXIII:650793-651104 1.1e-07 82_[+3]_5 chrVII:10103-10533 1.3e-07 60_[+3]_27 chrIV:229450-229795 1.3e-07 81_[+3]_6 chrXII:932067-932513 1.3e-07 26_[-3]_61 chrXI:431319-431669 1.4e-07 49_[+3]_38 chrXIII:145886-146286 1.7e-07 47_[+3]_40 chrII:89654-89953 1.7e-07 47_[-3]_40 chrIV:1355716-1356022 2.1e-07 19_[-3]_68 chrVIII:125917-126312 2.1e-07 37_[+3]_50 chrI:81909-82272 2.1e-07 69_[-3]_18 chrIV:1062896-1063088 2.8e-07 14_[-3]_73 chrX:703268-703368 2.8e-07 47_[-3]_40 chrVII:555313-555702 2.8e-07 52_[+3]_35 chrXII:710675-710863 2.8e-07 13_[+3]_74 chrV:13390-13514 3.1e-07 30_[+3]_57 chrXIII:731997-732417 3.1e-07 48_[+3]_39 chrXII:922104-922554 3.5e-07 65_[+3]_22 chrXV:79756-80122 3.5e-07 58_[-3]_29 chrVI:64906-65359 3.5e-07 84_[-3]_3 chrXIV:783836-784185 3.5e-07 76_[-3]_11 chrVII:149117-149548 3.9e-07 35_[-3]_52 chrIII:163447-163879 3.9e-07 33_[-3]_54 chrV:396176-396572 3.9e-07 54_[+3]_33 chrII:181352-181636 4.6e-07 50_[+3]_37 chrII:415503-415869 4.6e-07 46_[-3]_41 chrIV:411271-411641 4.6e-07 28_[+3]_59 chrXV:94475-94846 4.6e-07 24_[+3]_63 chrXII:650979-651259 4.6e-07 70_[+3]_17 chrV:305704-306212 4.6e-07 76_[+3]_11 chrIV:539025-539174 4.6e-07 55_[+3]_32 chrIX:68186-68527 5.6e-07 43_[+3]_44 chrXIII:225326-225737 5.6e-07 63_[+3]_24 chrII:592899-593291 5.6e-07 39_[-3]_48 chrXVI:378654-379029 5.6e-07 48_[-3]_39 chrXVI:76353-76728 7.6e-07 52_[-3]_35 chrIV:1300931-1301343 7.6e-07 21_[+3]_66 chrVII:726416-726779 7.6e-07 39_[+3]_48 chrIV:358093-358432 8.9e-07 36_[-3]_51 chrV:85124-85458 8.9e-07 58_[+3]_29 chrII:477010-477451 8.9e-07 53_[+3]_34 chrIX:254239-254549 8.9e-07 13_[-3]_74 chrIV:835753-836209 8.9e-07 19_[+3]_68 chrXII:522160-522442 1e-06 51_[+3]_36 chrXV:1028626-1029179 1e-06 54_[-3]_33 chrXVI:731913-732335 1e-06 29_[+3]_58 chrII:44990-45347 1e-06 51_[+3]_36 chrX:607831-607931 1e-06 51_[+3]_36 chrIV:130578-130979 1e-06 20_[-3]_67 chrV:53531-53966 1.1e-06 20_[+3]_67 chrXII:282498-282873 1.1e-06 21_[+3]_66 chrII:605710-606120 1.1e-06 50_[+3]_37 chrXII:241585-242006 1.3e-06 61_[+3]_26 chrVII:254092-254552 1.3e-06 74_[-3]_13 chrV:110502-110815 1.3e-06 69_[+3]_18 chrXIII:754417-754807 1.3e-06 9_[-3]_78 chrVIII:505817-506211 1.6e-06 36_[-3]_51 chrVIII:148945-149293 1.7e-06 12_[-3]_75 chrV:140460-140878 1.7e-06 55_[-3]_32 chrIV:341257-341632 1.7e-06 48_[-3]_39 chrXII:1028186-1028575 1.7e-06 67_[+3]_20 chrVII:534757-535268 1.7e-06 41_[-3]_46 chrXII:781450-781869 1.7e-06 46_[-3]_41 chrX:75324-75424 1.9e-06 36_[-3]_51 chrXVI:406191-406559 1.9e-06 45_[+3]_42 chrV:423094-423472 1.9e-06 38_[+3]_49 chrIV:321664-321965 1.9e-06 34_[+3]_53 chrVII:788317-788763 2.1e-06 38_[-3]_49 chrVI:221743-222093 2.1e-06 51_[-3]_36 chrXIV:444456-444794 2.1e-06 45_[-3]_42 chrXII:796407-796892 2.1e-06 34_[-3]_53 chrXVI:188614-188942 2.3e-06 61_[+3]_26 chrXV:167958-168463 2.3e-06 27_[-3]_60 chrVII:438580-438911 2.6e-06 62_[-3]_25 chrXV:1025725-1026042 2.6e-06 42_[+3]_45 chrVII:310467-310920 2.6e-06 42_[+3]_45 chrII:60798-61289 2.6e-06 79_[-3]_8 chrIX:257363-257740 2.6e-06 31_[+3]_56 chrXV:1004039-1004400 2.6e-06 77_[-3]_10 chrXV:216237-216675 3.2e-06 52_[+3]_35 chrIV:1401244-1401596 3.2e-06 62_[+3]_25 chrXV:968121-968409 3.5e-06 53_[-3]_34 chrXI:618807-619222 3.5e-06 46_[-3]_41 chrXII:897692-898034 3.5e-06 47_[+3]_40 chrXIV:499313-499619 3.9e-06 16_[-3]_71 chrXVI:281553-281907 3.9e-06 85_[+3]_2 chrIV:217136-217553 3.9e-06 19_[+3]_68 chrX:391881-391981 4.8e-06 61_[+3]_26 chrXI:313263-313687 5.2e-06 70_[+3]_17 chrIV:1450895-1451245 5.8e-06 62_[-3]_25 chrIX:316109-316595 5.8e-06 49_[+3]_38 chrXV:505113-505506 5.8e-06 34_[+3]_53 chrVII:648932-649410 5.8e-06 12_[-3]_75 chrXIII:124329-124741 6.4e-06 27_[-3]_60 chrIX:99636-100030 7e-06 26_[-3]_61 chrII:604120-604502 7.7e-06 39_[+3]_48 chrVIII:296884-297224 7.7e-06 52_[+3]_35 chrXIV:63106-63583 9.2e-06 23_[-3]_64 chrXII:48694-49103 1e-05 54_[-3]_33 chrX:651224-651324 1.4e-05 58_[+3]_29 chrII:332290-332748 1.4e-05 55_[+3]_32 chrIV:579045-579395 1.4e-05 35_[+3]_52 chrXI:158206-158606 1.6e-05 43_[+3]_44 chrXV:253803-254119 1.7e-05 66_[-3]_21 chrXV:866553-866946 1.7e-05 56_[-3]_31 chrXVI:520167-520534 1.8e-05 63_[+3]_24 chrIII:178321-178719 2e-05 19_[+3]_68 chrIV:308012-308382 2.1e-05 76_[+3]_11 chrXII:370643-370906 2.1e-05 61_[-3]_26 chrXV:81132-81562 2.3e-05 9_[-3]_78 chrIV:117112-117586 2.3e-05 70_[+3]_17 chrXVI:280772-281320 2.5e-05 82_[+3]_5 chrXIV:241391-241734 2.7e-05 50_[+3]_37 chrXIII:551362-551797 2.9e-05 73_[+3]_14 chrXV:978814-979131 3.1e-05 15_[-3]_72 chrXII:1018977-1019388 3.6e-05 10_[-3]_77 chrX:90064-90164 3.6e-05 44_[+3]_43 chrXV:281910-282394 3.9e-05 30_[-3]_57 chrV:354698-355340 4.1e-05 59_[-3]_28 chrXII:587405-587835 4.4e-05 43_[+3]_44 chrXIV:169809-169919 4.8e-05 4_[-3]_83 chrII:167890-168206 4.8e-05 53_[+3]_34 chrIV:490924-491287 5.5e-05 75_[+3]_12 chrII:165110-165398 6.2e-05 52_[+3]_35 chrVII:479247-479977 6.7e-05 72_[-3]_15 chrVIII:103881-104280 8.2e-05 26_[+3]_61 chrXI:108679-109088 9.3e-05 69_[+3]_18 chrIII:124126-124556 0.00011 37_[+3]_50 chrII:232513-232943 0.00012 56_[-3]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAYCCRTACAYY MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACAYCCRTACAYY width=13 seqs=143 chrX:690467-690567 ( 83) ACACCCGTACACC 1 chrIV:221953-222328 ( 45) ACACCCGTACACC 1 chrVIII:382916-383363 ( 12) ACACCCATACATC 1 chrXIV:6485-6889 ( 3) ACACCCACACACC 1 chrXIII:5285-5822 ( 72) ACACCCACACACC 1 chrIII:30-568 ( 36) ACACCCACACACC 1 chrV:6141-6584 ( 37) ACACCCACACACC 1 chrIV:48-324 ( 1) ACACCCACACACC 1 chrVI:4428-4987 ( 62) ACACCCACACACC 1 chrVIII:562232-562635 ( 83) ACACCCACACACC 1 chrXI:666418-666812 ( 47) ACACCCACACACC 1 chrXII:11018-11545 ( 38) ACACCCACACACC 1 chrXII:1064844-1065364 ( 39) ACACCCACACACC 1 chrXII:5426-5944 ( 31) ACACCCACACACC 1 chrX:157438-157538 ( 11) ACACCCGTACACT 1 chrXIII:650793-651104 ( 83) ACACCCGTACATT 1 chrVII:10103-10533 ( 61) GCACCCGTGCATC 1 chrIV:229450-229795 ( 82) ACATCCGTACATC 1 chrXII:932067-932513 ( 27) ACATCCGTACATC 1 chrXI:431319-431669 ( 50) ACACCCATACACT 1 chrXIII:145886-146286 ( 48) ACATCCATACACC 1 chrII:89654-89953 ( 48) ACATCCATACACC 1 chrIV:1355716-1356022 ( 20) ACACCCATACATT 1 chrVIII:125917-126312 ( 38) GCATCCGTACACC 1 chrI:81909-82272 ( 70) ACATCCGTGCACC 1 chrIV:1062896-1063088 ( 15) GCACCCACACATC 1 chrX:703268-703368 ( 48) GCACCCATGCATC 1 chrVII:555313-555702 ( 53) ACACCCGTGCATT 1 chrXII:710675-710863 ( 14) ACACCCACGCATC 1 chrV:13390-13514 ( 31) ACACCCATACCTC 1 chrXIII:731997-732417 ( 49) ACATCCGCACATC 1 chrXII:922104-922554 ( 66) ACACCCGTACATA 1 chrXV:79756-80122 ( 59) ACACCCGTACATA 1 chrVI:64906-65359 ( 85) ACACCCGTACATA 1 chrXIV:783836-784185 ( 77) ACACCCACACACT 1 chrVII:149117-149548 ( 36) GCATCCATACACC 1 chrIII:163447-163879 ( 34) GCACCCACGCACC 1 chrV:396176-396572 ( 55) ACATCCGTACACT 1 chrII:181352-181636 ( 51) GCACCCATACATT 1 chrII:415503-415869 ( 47) ACACCCATGCATT 1 chrIV:411271-411641 ( 29) ACACCCACACCCC 1 chrXV:94475-94846 ( 25) ACACCCATGCATT 1 chrXII:650979-651259 ( 71) ACACCCACACATT 1 chrV:305704-306212 ( 77) ACACCCACACATT 1 chrIV:539025-539174 ( 56) ACACCCACACCCC 1 chrIX:68186-68527 ( 44) ACATCCGTACATT 1 chrXIII:225326-225737 ( 64) ACATCCGTACATT 1 chrII:592899-593291 ( 40) GCATCCATACATC 1 chrXVI:378654-379029 ( 49) ACATCCGTACATT 1 chrXVI:76353-76728 ( 53) TCACCCGTACATC 1 chrIV:1300931-1301343 ( 22) ACATCCGTGCACT 1 chrVII:726416-726779 ( 40) ACACCCATACCCT 1 chrIV:358093-358432 ( 37) CCACCCATACATT 1 chrV:85124-85458 ( 59) CCACCCATACCCC 1 chrII:477010-477451 ( 54) GCACCCACACATT 1 chrIX:254239-254549 ( 14) GCACCCACACATT 1 chrIV:835753-836209 ( 20) ACACCCACGCCCC 1 chrXII:522160-522442 ( 52) ACATCCGTACACA 1 chrXV:1028626-1029179 ( 55) GCATCCGTACATT 1 chrXVI:731913-732335 ( 30) ACACCCATACCTT 1 chrII:44990-45347 ( 52) GCATCCGTACATT 1 chrX:607831-607931 ( 52) CCATCCATACATC 1 chrIV:130578-130979 ( 21) ACATCCGCACATT 1 chrV:53531-53966 ( 21) ACACCCACACATA 1 chrXII:282498-282873 ( 22) ACACCTGTACATC 1 chrII:605710-606120 ( 51) ACACCTGTACATC 1 chrXII:241585-242006 ( 62) ACATCCGTACATA 1 chrVII:254092-254552 ( 75) GCACCCGTGCATA 1 chrV:110502-110815 ( 70) ACACCCAGACACC 1 chrXIII:754417-754807 ( 10) ACCCCCATACATC 1 chrVIII:505817-506211 ( 37) GCATCCATACATT 1 chrVIII:148945-149293 ( 13) TCACCCATGCACC 1 chrV:140460-140878 ( 56) GCACCCATACCTT 1 chrIV:341257-341632 ( 49) CCATCCGTACATT 1 chrXII:1028186-1028575 ( 68) TCACCCATGCACC 1 chrVII:534757-535268 ( 42) GCATCCGTGCATT 1 chrXII:781450-781869 ( 47) GCATCCGTGCATT 1 chrX:75324-75424 ( 37) ACATCCACACCTC 1 chrXVI:406191-406559 ( 46) ACATCCGTACCTT 1 chrV:423094-423472 ( 39) ACCTCCGTACACC 1 chrIV:321664-321965 ( 35) ACCTCCGTACACC 1 chrVII:788317-788763 ( 39) ACATCCGTGCATA 1 chrVI:221743-222093 ( 52) TCACCCGTACATT 1 chrXIV:444456-444794 ( 46) CCATCCGTACCTC 1 chrXII:796407-796892 ( 35) GCATCCGTGCCTC 1 chrXVI:188614-188942 ( 62) AAACCCATGCATC 1 chrXV:167958-168463 ( 28) ACACCCGTGCCTA 1 chrVII:438580-438911 ( 63) CCATCCATACATT 1 chrXV:1025725-1026042 ( 43) ACACCCATTCATC 1 chrVII:310467-310920 ( 43) ACATCTGTACACC 1 chrII:60798-61289 ( 80) ACATCTGTACACC 1 chrIX:257363-257740 ( 32) ACATCTGTACACC 1 chrXV:1004039-1004400 ( 78) ACACCCTTGCACC 1 chrXV:216237-216675 ( 53) GCACCCGCGCCTT 1 chrIV:1401244-1401596 ( 63) CCACCCACACATA 1 chrXV:968121-968409 ( 54) ACGCCCACGCACC 1 chrXI:618807-619222 ( 47) CCATCCGTGCCTC 1 chrXII:897692-898034 ( 48) ACACCTGTACCTC 1 chrXIV:499313-499619 ( 17) ACACCAGTGCACC 1 chrXVI:281553-281907 ( 86) ACACCCTTACACT 1 chrIV:217136-217553 ( 20) GAACCCGTACATT 1 chrX:391881-391981 ( 62) ACACCCAGACCTC 1 chrXI:313263-313687 ( 71) ACATCTGCACATC 1 chrIV:1450895-1451245 ( 63) ACACCTGTACATA 1 chrIX:316109-316595 ( 50) GAACCCATACATT 1 chrXV:505113-505506 ( 35) AAACCCATACACA 1 chrVII:648932-649410 ( 13) GAACCCATACATT 1 chrXIII:124329-124741 ( 28) AAATCCGTACATT 1 chrIX:99636-100030 ( 27) ACACCAGTACATT 1 chrII:604120-604502 ( 40) ACATCTGTACATT 1 chrVIII:296884-297224 ( 53) CCACCAGTACATC 1 chrXIV:63106-63583 ( 24) ACATCCGAACATT 1 chrXII:48694-49103 ( 55) AGATCCGTACATC 1 chrX:651224-651324 ( 59) ACACCCATATACC 1 chrII:332290-332748 ( 56) GCACCCATACAAT 1 chrIV:579045-579395 ( 36) CCACCCATAAACC 1 chrXI:158206-158606 ( 44) CAACCCGTGCACA 1 chrXV:253803-254119 ( 67) TAATCCGTACACC 1 chrXV:866553-866946 ( 57) ACACCCATACAAA 1 chrXVI:520167-520534 ( 64) CCACCCAGGCCTC 1 chrIII:178321-178719 ( 20) AAGTCCGTACACC 1 chrIV:308012-308382 ( 77) ACATCCTTACATA 1 chrXII:370643-370906 ( 62) CCACCCATGAACC 1 chrXV:81132-81562 ( 10) AACCCCGTGCACT 1 chrIV:117112-117586 ( 71) AGACCCATACATA 1 chrXVI:280772-281320 ( 83) CCACCCATGAATC 1 chrXIV:241391-241734 ( 51) GCACCTAAACACC 1 chrXIII:551362-551797 ( 74) ACATCAGTACATA 1 chrXV:978814-979131 ( 16) GAACCCATTCATC 1 chrXII:1018977-1019388 ( 11) AAACCCAAACATT 1 chrX:90064-90164 ( 45) GCACCTGGACATT 1 chrXV:281910-282394 ( 31) GCATCCACTCCTC 1 chrV:354698-355340 ( 60) AACCCCATACATA 1 chrXII:587405-587835 ( 44) ACGTCTATGCACC 1 chrXIV:169809-169919 ( 5) ACACCTATACATG 1 chrII:167890-168206 ( 54) TCACCAGTACCTC 1 chrIV:490924-491287 ( 76) ACACCCAATCATT 1 chrII:165110-165398 ( 53) TAGCCCATACACC 1 chrVII:479247-479977 ( 73) ACACACACACACA 1 chrVIII:103881-104280 ( 27) CAGCCCACACATT 1 chrXI:108679-109088 ( 70) TCATCCAAACACA 1 chrIII:124126-124556 ( 38) CAATCCTTACACT 1 chrII:232513-232943 ( 57) GACTCCGTGCATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAYCCRTACAYY MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 13 n= 50952 bayes= 8.59971 E= 2.1e-196 99 -68 13 -252 -143 228 -368 -1380 152 -209 -235 -1380 -1380 186 -1380 12 -552 247 -1380 -1380 -320 229 -1380 -182 73 -1380 130 -352 -320 37 -268 114 123 -1380 28 -352 -394 244 -1380 -552 142 -35 -1380 -1380 -452 113 -1380 89 -113 151 -467 6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAYCCRTACAYY MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 13 nsites= 143 E= 2.1e-196 0.636364 0.111888 0.195804 0.055944 0.118881 0.867133 0.013986 0.000000 0.923077 0.041958 0.034965 0.000000 0.000000 0.650350 0.000000 0.349650 0.006993 0.993007 0.000000 0.000000 0.034965 0.874126 0.000000 0.090909 0.531469 0.000000 0.440559 0.027972 0.034965 0.230769 0.027972 0.706294 0.755245 0.000000 0.216783 0.027972 0.020979 0.972028 0.000000 0.006993 0.860140 0.139860 0.000000 0.000000 0.013986 0.391608 0.000000 0.594406 0.146853 0.510490 0.006993 0.335664 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAYCCRTACAYY MEME-3 regular expression -------------------------------------------------------------------------------- ACA[CT]CC[AG][TC][AG]CA[TC][CT] -------------------------------------------------------------------------------- Time 904.31 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:781450-781869 6.38e-03 28_[-3(7.63e-05)]_5_[-3(1.74e-06)]_\ 41 chrX:157438-157538 4.08e-04 10_[-3(6.20e-08)]_77 chrXIII:296759-298424 3.95e-01 100 chrIV:1150642-1151155 1.22e-06 64_[-1(5.59e-10)]_15 chrXII:370643-370906 4.42e-04 61_[-3(2.12e-05)]_26 chrXII:5426-5944 3.64e-05 30_[+3(6.20e-08)]_17_[+3(8.87e-07)]_\ 4_[+3(3.48e-07)]_10 chrIV:437517-438004 7.60e-07 69_[+1(2.35e-10)]_10 chrVII:798517-798947 7.19e-01 100 chrXV:867842-868144 7.24e-01 100 chrXIV:725875-726425 4.39e-04 38_[-2(1.85e-07)]_35 chrVII:930777-931264 9.37e-04 32_[-1(2.27e-07)]_47 chrVII:346168-346462 9.76e-01 100 chrVII:110410-110906 2.31e-04 18_[+2(7.10e-08)]_55 chrIX:99636-100030 2.40e-02 26_[-3(7.02e-06)]_61 chrXV:36396-36826 8.49e-01 100 chrXVI:378654-379029 2.51e-03 23_[-3(5.77e-06)]_12_[-3(5.58e-07)]_\ 39 chrXV:842463-842792 5.14e-01 100 chrV:311874-312293 1.08e-05 33_[-1(1.30e-08)]_46 chrXV:337413-337843 8.23e-01 100 chrI:180939-181492 1.63e-01 100 chrIII:177188-177578 1.43e-01 100 chrXII:1064844-1065364 4.11e-05 5_[-3(6.20e-08)]_5_[-3(2.12e-05)]_2_\ [-3(6.20e-08)]_13_[-3(2.87e-06)]_5_[-3(2.87e-06)]_5 chrVII:534757-535268 5.71e-04 24_[-3(8.71e-05)]_4_[-3(1.74e-06)]_\ 46 chrXIV:585848-586488 9.99e-01 100 chrIV:966025-966455 9.17e-01 100 chrIII:127536-127901 1.17e-05 55_[+1(1.63e-09)]_24 chrXII:373474-373904 5.02e-01 100 chrIX:438783-439363 5.24e-02 100 chrIV:1305433-1305866 1.45e-06 38_[+1(2.35e-10)]_41 chrIV:1114202-1114632 4.97e-01 100 chrIV:1354623-1354875 9.86e-01 100 chrIV:568652-569207 1.70e-08 45_[-2(4.06e-12)]_28 chrXIV:89495-89741 4.10e-01 100 chrIV:835753-836209 1.12e-04 19_[+3(8.87e-07)]_68 chrV:138443-138993 9.42e-09 40_[-2(4.06e-12)]_33 chrIV:1116858-1117020 7.48e-01 100 chrXIII:754417-754807 6.05e-03 9_[-3(1.27e-06)]_78 chrXV:80455-80885 8.07e-01 100 chrX:538340-538440 4.10e-01 100 chrXV:977986-978229 9.28e-01 100 chrIV:519539-519953 2.40e-07 54_[+1(1.22e-09)]_25 chrXII:1051888-1052358 2.23e-07 42_[-1(1.63e-11)]_37 chrXIV:104611-105181 1.90e-07 2_[-2(2.57e-10)]_71 chrX:517649-517749 5.13e-01 100 chrII:238016-238151 6.10e-01 100 chrVII:482224-482566 7.23e-02 100 chrXIII:501042-501472 8.20e-01 100 chrVIII:150234-150664 7.11e-01 100 chrVI:101150-101640 3.67e-04 30_[+1(5.80e-07)]_49 chrII:236983-237195 1.92e-01 100 chrXII:930860-931094 4.83e-01 100 chrIV:1401244-1401596 8.70e-03 47_[+3(5.45e-05)]_2_[+3(3.20e-06)]_\ 25 chrVIII:382323-382813 9.07e-01 100 chrIV:539025-539174 1.97e-05 55_[+3(4.59e-07)]_32 chrXIV:631701-632139 2.11e-04 26_[-1(8.31e-07)]_53 chrV:110502-110815 5.19e-03 69_[+3(1.27e-06)]_18 chrII:9353-9823 7.01e-07 52_[+1(1.22e-09)]_27 chrVII:115279-115759 1.33e-04 26_[+1(1.03e-07)]_53 chrVIII:83207-83637 8.02e-01 100 chrXVI:880104-880573 7.06e-16 9_[+2(4.06e-12)]_16_[-1(1.63e-11)]_\ 27 chrXII:713021-713570 7.65e-01 100 chrXIII:923404-923845 3.67e-01 100 chrIII:816-1330 2.68e-01 100 chrXII:796928-797400 8.50e-01 100 chrXIV:546894-547355 2.19e-04 19_[+1(5.80e-07)]_60 chrVII:878597-879030 2.67e-01 100 chrXII:897692-898034 2.15e-02 47_[+3(3.53e-06)]_40 chrVII:495-1081 3.10e-01 100 chrXV:180141-180571 5.98e-01 100 chrVII:783868-784131 9.32e-01 100 chrIV:410188-410564 9.29e-05 60_[+1(1.83e-08)]_19 chrXV:1004039-1004400 5.94e-03 77_[-3(2.60e-06)]_10 chrXIII:761850-762265 7.97e-01 100 chrVII:533874-534144 9.19e-01 100 chrVIII:505817-506211 3.98e-03 23_[-3(2.68e-05)]_[-3(1.56e-06)]_51 chrVII:412133-412603 1.05e-04 20_[-1(5.80e-08)]_59 chrVII:255253-255426 9.52e-01 100 chrII:36205-36593 4.10e-04 56_[+1(3.98e-07)]_23 chrXIV:174289-174511 1.00e+00 100 chrX:374184-374284 3.91e-01 100 chrXV:619546-619976 9.84e-01 100 chrVII:648932-649410 1.61e-02 12_[-3(5.77e-06)]_2_[-3(7.02e-06)]_\ 60 chrII:592899-593291 2.56e-05 22_[-3(2.68e-05)]_4_[-3(5.58e-07)]_\ 48 chrV:487153-487591 2.35e-07 10_[+2(2.94e-11)]_63 chrXVI:173053-173669 7.26e-01 100 chrIII:126549-126979 8.26e-01 100 chrV:397583-397902 3.99e-01 100 chrXIV:624519-624949 8.62e-01 100 chrIV:667791-668282 1.30e-15 22_[+2(4.06e-12)]_16_[-1(1.63e-11)]_\ 14 chrXII:962835-963304 3.59e-07 7_[-1(1.22e-09)]_72 chrXIV:500365-500791 6.91e-01 100 chrXVI:577323-577753 8.85e-01 100 chrXV:779697-780384 9.05e-01 100 chrV:139698-140069 3.58e-01 100 chrVII:779384-779877 1.33e-02 100 chrXII:588972-589402 2.31e-01 100 chrV:102277-102510 3.62e-01 100 chrXVI:304148-304578 4.82e-01 100 chrI:81909-82272 3.11e-04 46_[+3(3.61e-05)]_10_[-3(2.13e-07)]_\ 18 chrVII:541592-542176 2.35e-07 58_[-2(2.94e-11)]_15 chrV:303109-303376 9.05e-01 100 chrXII:1038813-1039243 2.37e-03 [+2(3.81e-05)]_73 chrXV:866553-866946 3.88e-02 38_[+3(1.96e-05)]_5_[-3(1.70e-05)]_\ 31 chrIII:30572-30829 2.37e-01 100 chrXII:11018-11545 4.09e-05 8_[+3(8.87e-07)]_1_[+3(8.87e-07)]_2_\ [+3(6.20e-08)]_[+3(2.87e-06)]_4_[+3(6.20e-08)]_1_[+3(6.20e-08)]_6 chrXV:167958-168463 1.54e-03 27_[-3(2.33e-06)]_6_[+3(7.02e-06)]_\ 41 chrXII:710194-710624 6.97e-01 100 chrXII:855977-856368 7.61e-01 100 chrVIII:300005-300435 8.18e-01 100 chrXV:900154-900362 5.54e-01 100 chrXII:167775-168248 2.62e-06 35_[-1(2.35e-10)]_44 chrXII:92307-92839 1.79e-04 24_[+1(5.80e-07)]_55 chrIV:1461551-1462087 4.60e-05 31_[-1(7.11e-09)]_48 chrXI:379482-379987 5.72e-10 3_[+1(5.80e-08)]_16_[-2(2.78e-09)]_\ 33 chrXII:731867-732298 4.89e-07 65_[+1(1.08e-10)]_14 chrIV:1355232-1355340 5.22e-01 100 chrI:143065-143553 5.78e-01 100 chrXIII:572672-573177 6.96e-07 10_[+2(4.41e-10)]_63 chrIV:443904-444334 9.01e-01 100 chrIX:257363-257740 2.86e-03 3_[+3(3.86e-05)]_15_[+3(2.60e-06)]_\ 56 chrVI:64116-64323 9.45e-01 100 chrXV:287997-288393 2.21e-03 54_[+1(8.31e-07)]_25 chrVII:10350-10780 4.08e-01 100 chrVIII:296884-297224 3.49e-03 52_[+3(7.68e-06)]_35 chrXII:214720-215171 5.60e-05 31_[-1(1.30e-08)]_48 chrIV:1101561-1101991 8.67e-01 100 chrX:418730-418830 8.66e-01 100 chrVII:366081-366707 8.07e-01 100 chrIV:1095134-1095649 1.35e-05 30_[+2(5.55e-08)]_43 chrXI:431319-431669 1.02e-03 49_[+3(1.43e-07)]_38 chrXII:710675-710863 1.45e-03 13_[+3(2.80e-07)]_74 chrX:139200-139300 7.17e-01 100 chrXI:108679-109088 1.19e-03 69_[+3(9.30e-05)]_5_[+3(5.58e-07)] chrIII:292629-292990 7.08e-01 100 chrIV:440654-441084 7.43e-01 100 chrVIII:132861-133386 1.07e-06 5_[-1(2.35e-10)]_74 chrIX:254239-254549 8.37e-04 13_[-3(8.87e-07)]_74 chrXI:666418-666812 2.58e-05 46_[-3(6.20e-08)]_15_[-3(2.87e-06)]_\ 13 chrIV:117112-117586 1.21e-02 70_[+3(2.30e-05)]_3_[+3(3.61e-05)]_\ 1 chrIV:645005-645415 2.16e-02 35_[-1(7.51e-05)]_44 chrXVI:280772-281320 3.71e-02 82_[+3(2.50e-05)]_5 chrV:354698-355340 1.95e-09 7_[-2(2.94e-11)]_25_[-3(4.14e-05)]_\ 28 chrXII:734625-735027 1.30e-15 33_[+1(1.63e-11)]_16_[-2(4.06e-12)]_\ 3 chrXVI:860180-860591 8.30e-04 43_[+1(2.27e-07)]_36 chrVI:204779-205184 2.26e-06 36_[-1(1.83e-08)]_8_[-2(6.43e-05)]_\ 8 chrIV:579045-579395 2.81e-02 35_[+3(1.42e-05)]_7_[+3(9.30e-05)]_\ 32 chrXII:932067-932513 7.14e-04 18_[-3(1.28e-07)]_3_[-3(1.28e-07)]_\ 12_[-3(1.02e-06)]_28 chrXVI:775632-776031 4.38e-01 100 chrII:604120-604502 9.60e-03 23_[+3(3.86e-05)]_3_[+3(7.68e-06)]_\ 48 chrII:266157-266689 3.17e-13 12_[+1(8.74e-11)]_15_[-2(2.57e-10)]_\ 25 chrXV:562-1052 2.68e-01 100 chrVIII:125917-126312 1.92e-03 37_[+3(2.13e-07)]_1_[+3(7.63e-05)]_\ 36 chrVII:857248-857680 4.60e-05 48_[-1(7.11e-09)]_31 chrX:58974-59074 2.28e-06 19_[-1(8.74e-11)]_60 chrIX:27-297 7.32e-01 100 chrV:130862-131368 1.70e-07 18_[+2(1.94e-09)]_14_[-1(7.51e-05)]_\ 20 chrVII:555313-555702 6.48e-04 52_[+3(2.80e-07)]_3_[-3(1.55e-05)]_\ 19 chrIV:309406-309763 3.98e-01 100 chrIX:183268-183710 1.20e-15 2_[+2(4.06e-12)]_16_[-1(1.63e-11)]_\ 34 chrXII:592370-592834 2.10e-07 38_[-1(1.08e-10)]_41 chrVIII:358288-358797 2.88e-04 9_[-1(4.49e-05)]_18_[-1(3.98e-07)]_\ 31 chrIV:130011-130425 6.16e-01 100 chrVII:480205-480679 6.87e-01 100 chrXVI:622355-622841 6.61e-05 15_[-1(4.49e-05)]_18_[-1(3.98e-07)]_\ 25 chrV:551131-551545 2.94e-08 41_[-1(1.63e-11)]_38 chrII:89654-89953 1.05e-03 27_[-3(3.91e-06)]_7_[-3(1.75e-07)]_\ 40 chrXV:438416-438967 1.01e-11 9_[+1(1.03e-07)]_38_[-2(9.12e-11)]_\ 5 chrII:167890-168206 1.48e-02 36_[+3(4.75e-05)]_4_[+3(4.75e-05)]_\ 34 chrVII:726416-726779 2.58e-03 39_[+3(7.59e-07)]_4_[+3(7.59e-07)]_\ 31 chrX:349079-349179 7.64e-01 100 chrXV:966048-966478 8.96e-01 100 chrX:115755-115855 2.35e-07 13_[+2(2.94e-11)]_60 chrXIII:739744-740174 6.58e-01 100 chrIV:321664-321965 4.84e-03 34_[+3(1.94e-06)]_13_[+3(9.17e-06)]_\ 27 chrVIII:127625-127756 7.94e-01 100 chrXVI:559985-560517 1.74e-04 20_[-1(4.49e-05)]_18_[-1(3.98e-07)]_\ 20 chrX:90064-90164 5.73e-02 44_[+3(3.61e-05)]_1_[+3(3.86e-05)]_\ 29 chrXV:678747-679191 2.74e-02 100 chrX:515151-515251 7.95e-01 100 chrVIII:466738-467235 9.79e-01 100 chrX:541304-541404 4.31e-07 63_[-2(2.30e-10)]_10 chrV:305704-306212 2.46e-03 76_[+3(4.59e-07)]_11 chrXII:1028186-1028575 8.34e-03 67_[+3(1.74e-06)]_2_[-3(6.69e-05)]_\ 5 chrXIV:88875-89592 4.38e-01 100 chrXIII:504673-505239 1.77e-01 100 chrIV:130578-130979 1.71e-03 20_[-3(1.02e-06)]_67 chrXV:900727-900970 9.21e-01 100 chrII:168639-168795 5.51e-01 100 chrV:438498-438941 2.01e-04 38_[+1(5.80e-08)]_41 chrXV:1027949-1028250 6.16e-01 100 chrVII:794201-794636 7.91e-05 56_[+1(1.30e-08)]_23 chrIV:509298-509530 7.22e-01 100 chrIV:1355716-1356022 1.55e-03 19_[-3(2.13e-07)]_11_[-3(8.87e-07)]_\ 44 chrXIV:783836-784185 9.99e-04 76_[-3(3.48e-07)]_11 chrV:443039-443501 2.70e-07 26_[-1(1.63e-11)]_53 chrXI:549019-549449 6.12e-01 100 chrIII:315570-315855 8.62e-01 100 chrX:703268-703368 1.05e-03 47_[-3(2.80e-07)]_40 chrXII:363187-363358 5.46e-01 100 chrXIV:567893-568458 1.10e-07 63_[-2(1.76e-09)]_10 chrXVI:768972-769506 7.66e-08 19_[+2(9.12e-11)]_54 chrVII:738883-739327 1.11e-07 74_[+1(1.63e-11)]_5 chrIV:229450-229795 2.93e-04 57_[+3(7.02e-06)]_11_[+3(1.28e-07)]_\ 6 chrVIII:5271-5701 2.53e-01 100 chrXII:638564-638994 7.10e-01 100 chrIV:340345-340639 9.99e-01 100 chrV:407846-408276 1.86e-01 100 chrIV:992604-993029 1.56e-03 65_[+1(2.27e-07)]_14 chrIV:1021677-1022015 7.30e-01 100 chrIV:434002-434587 2.56e-13 21_[+2(2.57e-10)]_15_[-1(8.74e-11)]_\ 16 chrXV:619758-620188 1.13e-01 100 chrV:86411-86827 3.61e-06 42_[+1(2.35e-10)]_37 chrII:326573-327099 6.53e-10 7_[+2(2.30e-10)]_16_[-1(2.47e-06)]_\ 29 chrII:60798-61289 8.70e-04 79_[-3(2.60e-06)]_8 chrV:396176-396572 2.54e-03 54_[+3(3.93e-07)]_5_[+3(5.10e-05)]_\ 15 chrXIII:650968-651398 1.56e-01 100 chrIII:169359-169789 5.46e-01 100 chrIV:217136-217553 1.64e-03 19_[+3(3.91e-06)]_68 chrIX:256645-257075 5.98e-01 100 chrXIII:124329-124741 2.36e-02 9_[+3(9.17e-06)]_5_[-3(6.37e-06)]_\ 60 chrIV:221953-222328 1.12e-05 20_[-3(8.71e-05)]_11_[-3(3.59e-09)]_\ 43 chrV:250088-250546 3.35e-08 26_[+1(7.51e-05)]_14_[-2(7.39e-10)]_\ 12 chrVIII:388628-389215 1.10e-07 23_[+2(1.76e-09)]_50 chrXIV:102519-102953 6.83e-06 37_[+1(1.63e-09)]_42 chrVI:64906-65359 5.90e-04 61_[-3(1.55e-05)]_10_[-3(3.48e-07)]_\ 3 chrXVI:689346-689848 4.66e-08 25_[+1(8.74e-11)]_54 chrV:407628-408058 1.07e-01 100 chrV:430988-431582 4.08e-03 1_[+2(3.81e-05)]_72 chrXII:796407-796892 1.60e-03 7_[-3(8.71e-05)]_14_[-3(2.14e-06)]_\ 53 chrVIII:562232-562635 3.56e-05 82_[-3(6.20e-08)]_5 chrX:422684-422784 8.49e-07 57_[-2(4.41e-10)]_16 chrII:332290-332748 4.10e-02 55_[+3(1.42e-05)]_32 chrXVI:572020-572534 3.89e-04 41_[+1(2.27e-07)]_38 chrXII:369270-369798 8.98e-01 100 chrXI:504-1035 3.77e-01 100 chrI:29-230 7.81e-02 100 chrV:61027-62169 5.80e-01 100 chrX:702597-702697 5.40e-01 100 chrXIII:420336-420882 6.94e-10 30_[+2(2.78e-09)]_16_[-1(5.80e-08)]_\ 6 chrIII:292843-293273 3.09e-01 100 chrIII:178321-178719 8.75e-03 1_[-3(7.68e-06)]_5_[+3(1.96e-05)]_\ 68 chrV:316757-317187 3.84e-01 100 chrXV:79756-80122 1.21e-03 58_[-3(3.48e-07)]_29 chrI:182386-182828 2.23e-06 17_[-1(2.35e-10)]_62 chrV:362835-363265 9.82e-01 100 chrXII:233381-233542 1.53e-01 100 chrXVI:55855-56522 4.48e-04 32_[+2(4.88e-07)]_41 chrII:350604-350994 2.80e-01 100 chrIV:579332-579594 6.76e-01 100 chrIV:802550-803025 1.59e-02 36_[-1(7.51e-05)]_43 chrXV:976206-976773 4.90e-06 25_[-2(4.41e-10)]_48 chrIV:118474-118714 9.05e-01 100 chrXIII:259025-259477 2.47e-06 9_[-1(2.35e-10)]_70 chrXVI:581870-582360 2.03e-12 4_[+1(2.67e-07)]_15_[-2(3.48e-12)]_\ 33 chrV:423094-423472 9.16e-03 38_[+3(1.94e-06)]_49 chrXI:432267-432697 1.40e-02 51_[+1(1.85e-05)]_28 chrVII:736128-736604 1.74e-08 66_[-2(4.06e-12)]_7 chrXIV:632393-632864 1.16e-11 28_[+1(1.63e-09)]_16_[-2(9.96e-10)]_\ 8 chrVIII:115980-116390 3.33e-07 15_[-1(8.74e-11)]_64 chrVII:799731-800161 6.37e-01 100 chrXII:27-299 6.28e-01 100 chrX:531603-531703 4.08e-08 2_[+1(8.30e-05)]_13_[-2(9.12e-11)]_\ 37 chrII:197255-197915 6.85e-09 3_[-2(4.06e-12)]_70 chrXI:218122-218552 1.73e-02 40_[+2(3.81e-05)]_33 chrX:608821-608921 9.00e-02 100 chrXI:83978-84403 5.63e-07 75_[+1(1.22e-09)]_4 chrVII:405269-405765 1.66e-08 45_[-2(4.06e-12)]_28 chrXI:313263-313687 7.27e-03 70_[+3(5.23e-06)]_17 chrXI:578774-579280 7.66e-08 54_[-2(9.12e-11)]_19 chrIV:1300931-1301343 3.15e-03 21_[+3(7.59e-07)]_3_[-3(3.86e-05)]_\ 50 chrXVI:575146-575576 5.57e-01 100 chrVIII:85166-85602 2.39e-05 8_[-1(5.80e-08)]_71 chrVII:10103-10533 7.67e-04 60_[+3(1.28e-07)]_27 chrXV:505113-505506 1.28e-03 34_[+3(5.77e-06)]_12_[+3(1.01e-05)]_\ 28 chrXI:618807-619222 1.14e-03 18_[+3(4.42e-05)]_15_[-3(3.53e-06)]_\ 41 chrXV:110811-111267 1.88e-01 100 chrI:142247-142653 2.43e-01 100 chrXIII:731997-732417 1.71e-03 48_[+3(3.11e-07)]_3_[-3(1.01e-05)]_\ 23 chrXVI:76353-76728 8.85e-04 52_[-3(7.59e-07)]_35 chrVII:254092-254552 2.69e-03 55_[+3(2.33e-06)]_6_[-3(1.27e-06)]_\ 13 chrIII:142588-142995 1.32e-03 9_[-1(2.27e-07)]_70 chrV:363677-363980 5.77e-01 100 chrXI:46568-47000 7.52e-08 2_[+2(3.82e-11)]_71 chrIII:124126-124556 9.92e-02 100 chrXII:650979-651259 9.04e-04 70_[+3(4.59e-07)]_17 chrII:477010-477451 5.01e-03 34_[+3(5.77e-06)]_6_[+3(8.87e-07)]_\ 34 chrX:542753-542853 1.10e-03 54_[-1(8.31e-07)]_25 chrIV:341257-341632 6.55e-04 48_[-3(1.74e-06)]_39 chrXV:854004-854448 6.05e-12 12_[+2(3.97e-10)]_15_[-1(1.30e-08)]_\ 25 chrXV:1070941-1071371 7.36e-01 100 chrXV:94475-94846 2.40e-03 24_[+3(4.59e-07)]_63 chrXVI:580211-580641 9.81e-01 100 chrXIII:362878-363335 2.31e-04 50_[-2(7.10e-08)]_23 chrIV:322972-323421 9.06e-01 100 chrXVI:188614-188942 4.90e-04 61_[+3(2.33e-06)]_26 chrXII:975839-976261 1.51e-05 27_[-1(1.63e-09)]_52 chrXVI:282174-282604 9.59e-01 100 chrXIII:91613-91856 5.17e-02 100 chrII:605710-606120 3.65e-03 50_[+3(1.14e-06)]_37 chrXII:793715-794156 4.20e-02 100 chrXII:152138-152568 7.80e-01 100 chrXV:968121-968409 1.51e-03 53_[-3(3.53e-06)]_34 chrXII:1064305-1064546 9.84e-01 100 chrVII:328341-328968 2.35e-07 21_[-2(2.94e-11)]_52 chrXV:867244-867674 2.05e-01 100 chrVIII:555899-556130 3.41e-01 100 chrVIII:109685-110115 6.35e-01 100 chrXVI:942144-942574 9.95e-02 100 chrXVI:407508-407837 9.22e-01 100 chrXII:489263-489574 1.17e-02 30_[+1(1.51e-05)]_49 chrX:378154-378254 1.36e-04 42_[+1(5.80e-08)]_37 chrV:112478-112908 1.45e-01 100 chrX:450994-451094 2.63e-01 100 chrII:414018-414240 2.39e-01 100 chrVI:4428-4987 3.88e-05 32_[+3(8.87e-07)]_2_[+3(6.20e-08)]_\ 1_[+3(6.20e-08)]_11_[+3(6.20e-08)]_2 chrXV:281910-282394 1.28e-05 30_[-3(3.86e-05)]_18_[+1(2.27e-07)]_\ 18 chrXII:232675-233105 5.42e-02 65_[-1(7.26e-05)]_14 chrIV:490924-491287 1.18e-01 75_[+3(5.45e-05)]_12 chrVII:27-194 2.10e-04 12_[-1(6.16e-06)]_38_[+2(8.97e-05)]_\ 2 chrIV:48-324 1.92e-05 [+3(6.20e-08)]_87 chrIV:1075298-1075730 7.74e-08 9_[+2(1.30e-10)]_64 chrX:617706-617806 7.31e-08 52_[+1(1.08e-10)]_27 chrVII:148605-148853 8.62e-01 100 chrII:256689-256915 5.49e-01 100 chrXI:219689-220127 7.96e-05 44_[+1(1.83e-08)]_35 chrI:166043-166635 3.17e-06 21_[-2(3.97e-10)]_52 chrIV:980822-981277 1.72e-06 27_[-1(2.35e-10)]_52 chrVII:440444-441244 8.42e-02 100 chrXVI:435671-436222 3.19e-01 100 chrXI:202787-203282 2.03e-12 22_[+1(2.67e-07)]_15_[-2(3.48e-12)]_\ 15 chrIX:210468-210928 1.30e-15 24_[+1(1.63e-11)]_16_[-2(4.06e-12)]_\ 12 chrII:232513-232943 2.74e-02 100 chrXIV:444456-444794 8.49e-03 29_[-3(6.37e-06)]_3_[-3(2.14e-06)]_\ 42 chrII:235058-235363 4.86e-01 100 chrII:644985-645419 2.35e-07 57_[-2(2.94e-11)]_16 chrXIV:282066-282496 8.44e-01 100 chrIII:11037-11483 1.46e-01 26_[-3(6.69e-05)]_61 chrXVI:184978-185408 4.86e-01 100 chrVII:278345-278775 5.47e-01 100 chrXII:1018977-1019388 6.06e-02 10_[-3(3.61e-05)]_77 chrXV:36-290 1.17e-02 70_[-1(3.51e-05)]_9 chrVI:162012-162416 7.79e-04 63_[+1(2.27e-07)]_16 chrVII:870491-870921 7.69e-01 100 chrXIII:225326-225737 2.10e-03 50_[+3(1.02e-06)]_[+3(5.58e-07)]_24 chrIV:1201502-1202007 4.45e-04 53_[+1(2.67e-07)]_26 chrXII:673692-674246 9.88e-01 100 chrXI:138820-139250 9.93e-01 100 chrXII:241585-242006 1.57e-03 61_[+3(1.27e-06)]_8_[+3(5.77e-06)]_\ 5 chrIII:169088-169198 4.67e-01 100 chrX:227806-227906 5.88e-01 100 chrVI:64234-64664 8.73e-01 100 chrXIV:626154-626584 5.55e-01 100 chrIII:123419-123821 1.94e-11 8_[+2(1.72e-11)]_22_[-1(8.31e-07)]_\ 22 chrVII:828486-828990 1.66e-08 36_[+2(4.06e-12)]_37 chrX:417564-417664 4.79e-01 100 chrV:135174-135711 2.03e-12 34_[+2(3.48e-12)]_15_[-1(2.67e-07)]_\ 3 chrXIII:131587-132096 1.70e-08 35_[+2(4.06e-12)]_38 chrXV:901491-901710 2.26e-01 100 chrIII:163447-163879 4.36e-04 33_[-3(3.93e-07)]_17_[-3(3.34e-05)]_\ 24 chrIX:325530-326058 3.17e-13 11_[+1(8.74e-11)]_15_[-2(2.57e-10)]_\ 26 chrXIII:551362-551797 7.93e-02 13_[-3(4.75e-05)]_47_[+3(2.88e-05)]_\ 14 chrVIII:103881-104280 4.15e-02 26_[+3(8.16e-05)]_61 chrII:230418-230848 8.26e-01 100 chrV:140460-140878 2.39e-03 55_[-3(1.74e-06)]_32 chrXVI:406191-406559 5.95e-03 45_[+3(1.94e-06)]_3_[+3(6.69e-05)]_\ 26 chrIV:946104-946646 2.50e-05 46_[-2(4.67e-09)]_27 chrX:701764-701864 8.73e-01 100 chrXVI:744082-744564 2.31e-05 53_[-2(3.53e-08)]_20 chrIV:411271-411641 1.12e-04 28_[+3(4.59e-07)]_15_[+3(3.61e-05)]_\ 31 chrIV:1061166-1061596 3.26e-01 100 chrIX:316109-316595 2.34e-02 49_[+3(5.77e-06)]_38 chrX:73375-73475 5.62e-01 100 chrV:6141-6584 2.74e-04 36_[+3(6.20e-08)]_51 chrVII:700476-701281 4.18e-01 100 chrIV:1359272-1359803 5.35e-01 100 chrX:651224-651324 9.16e-03 58_[+3(1.42e-05)]_12_[+3(4.14e-05)]_\ 4 chrXV:253803-254119 1.08e-02 35_[+3(5.10e-05)]_18_[-3(1.70e-05)]_\ 21 chrXI:413891-414321 5.61e-01 100 chrXII:282498-282873 5.05e-03 21_[+3(1.14e-06)]_4_[+3(1.42e-05)]_\ 49 chrIV:488502-489081 3.69e-06 57_[+2(2.30e-10)]_16 chrVII:73641-74124 2.01e-04 41_[-1(5.80e-08)]_38 chrIV:492241-492555 9.98e-01 100 chrV:314040-314470 6.74e-01 100 chrX:204490-204590 1.72e-01 100 chrVII:557396-557557 8.56e-01 100 chrII:415503-415869 1.11e-03 30_[-3(5.45e-05)]_3_[-3(4.59e-07)]_\ 41 chrX:607831-607931 6.29e-03 51_[+3(1.02e-06)]_5_[+3(4.14e-05)]_\ 18 chrVII:730929-731436 1.16e-11 12_[+1(1.63e-09)]_16_[-2(9.96e-10)]_\ 24 chrVI:191289-191850 1.22e-06 65_[-1(5.59e-10)]_14 chrX:74561-74661 9.85e-01 100 chrXV:663579-664126 6.94e-10 11_[+2(2.78e-09)]_16_[-1(5.80e-08)]_\ 25 chrVII:823255-823695 8.18e-05 64_[+1(5.80e-08)]_15 chrXV:228112-228553 1.51e-05 56_[+1(1.63e-09)]_23 chrVIII:382916-383363 6.38e-06 11_[-3(3.40e-08)]_4_[-3(3.91e-06)]_\ 59 chrXII:628158-628678 4.40e-05 22_[+1(7.11e-09)]_57 chrVII:149117-149548 3.32e-03 35_[-3(3.93e-07)]_52 chrVIII:147713-148143 1.10e-01 11_[-1(7.26e-05)]_68 chrII:181352-181636 6.15e-04 50_[+3(4.59e-07)]_37 chrXV:780351-780855 1.36e-01 100 chrXIII:290555-291025 8.95e-01 100 chrXIV:553082-553190 7.86e-01 100 chrII:44990-45347 2.01e-03 51_[+3(1.02e-06)]_5_[-3(1.01e-05)]_\ 18 chrV:408949-409121 5.81e-01 100 chrXI:490741-491186 1.16e-03 62_[+1(2.27e-07)]_17 chrXIV:229708-230142 6.04e-01 100 chrXIII:168567-169091 1.10e-03 23_[+1(8.31e-07)]_56 chrXIII:888745-889048 9.92e-01 100 chrVII:553908-554338 1.84e-01 100 chrXII:369804-369929 2.36e-04 49_[+1(9.54e-07)]_30 chrXIV:166957-167387 9.02e-01 100 chrXII:149808-150238 5.12e-01 100 chrII:165110-165398 2.32e-02 52_[+3(6.24e-05)]_35 chrVI:210442-210900 1.10e-03 57_[-1(8.31e-07)]_22 chrXVI:153967-154397 6.43e-01 100 chrXVI:281553-281907 1.29e-02 69_[+3(1.42e-05)]_3_[+3(3.91e-06)]_\ 2 chrXIV:552717-553147 4.32e-01 100 chrIV:1175610-1176179 8.11e-06 28_[-2(4.41e-10)]_45 chrV:306454-306884 3.37e-01 100 chrXI:309281-309711 6.06e-01 100 chrXIV:499313-499619 4.16e-04 16_[-3(3.91e-06)]_71 chrX:139890-139990 7.31e-01 100 chrVII:557064-557494 3.62e-01 100 chrII:393418-393527 7.96e-01 100 chrXVI:733186-733316 6.76e-01 100 chrXV:113560-114011 2.09e-06 74_[+1(8.74e-11)]_5 chrXV:571722-572209 3.91e-01 100 chrIII:14309-14792 3.44e-01 100 chrXIV:442823-443345 1.77e-01 100 chrXII:709937-710367 9.17e-01 100 chrXII:1029757-1029977 9.12e-02 100 chrX:75324-75424 6.56e-03 36_[-3(1.94e-06)]_29_[-3(2.60e-06)]_\ 9 chrXV:464220-464700 1.79e-04 39_[+1(5.80e-07)]_40 chrXIII:61257-61687 1.00e+00 100 chrV:85124-85458 9.86e-04 29_[+3(1.11e-05)]_16_[+3(8.87e-07)]_\ 29 chrXI:28-273 1.82e-02 45_[-1(1.03e-05)]_34 chrVII:882464-882938 3.71e-01 100 chrIV:1062896-1063088 2.33e-03 14_[-3(2.80e-07)]_73 chrX:697998-698098 3.11e-01 100 chrXV:709976-710395 5.77e-01 100 chrX:514919-515019 5.94e-01 100 chrXIII:463337-463925 1.34e-06 15_[-2(2.30e-10)]_58 chrVII:845435-845898 9.03e-04 32_[+1(2.27e-07)]_47 chrXI:159204-159472 8.19e-01 100 chrIV:322289-322719 7.69e-01 100 chrXIV:63106-63583 1.06e-02 23_[-3(9.17e-06)]_64 chrIV:1065188-1065618 9.30e-01 100 chrII:414879-414996 8.65e-01 100 chrXIV:602144-602484 2.08e-07 55_[+1(1.63e-11)]_24 chrXII:448512-448963 1.14e-01 5_[-1(7.51e-05)]_74 chrXIV:96048-96507 2.19e-07 15_[+2(2.78e-09)]_58 chrXV:92922-93440 3.02e-01 100 chrXVI:338721-339110 3.81e-01 100 chrXVI:731913-732335 1.35e-03 29_[+3(1.02e-06)]_58 chrXV:978814-979131 7.54e-03 15_[-3(3.09e-05)]_72 chrX:391881-391981 3.31e-03 61_[+3(4.78e-06)]_26 chrIX:300077-300548 1.97e-03 9_[-1(2.67e-07)]_70 chrVII:311146-311633 7.32e-01 100 chrX:233699-233799 3.42e-09 32_[+1(2.27e-07)]_15_[-2(3.61e-09)]_\ 5 chrXIII:145886-146286 2.31e-05 47_[+3(1.75e-07)]_17_[+3(9.17e-06)]_\ 10 chrVII:310467-310920 8.15e-03 42_[+3(2.60e-06)]_2_[+3(2.88e-05)]_\ 30 chrXV:253077-253507 4.69e-01 100 chrIV:1354826-1355256 1.00e+00 100 chrVII:122015-122526 2.04e-03 56_[+1(2.67e-07)]_23 chrXII:11804-12057 7.91e-01 100 chrXVI:404817-405521 6.35e-02 100 chrXII:366049-366540 7.68e-01 100 chrXII:794165-795170 5.23e-01 100 chrV:53531-53966 2.33e-03 20_[+3(1.14e-06)]_3_[-3(3.20e-06)]_\ 51 chrIX:68186-68527 4.63e-03 43_[+3(5.58e-07)]_44 chrXV:216237-216675 3.79e-03 52_[+3(3.20e-06)]_3_[+3(3.86e-05)]_\ 19 chrXII:899309-899583 1.87e-01 100 chrXVI:306187-306617 3.53e-01 100 chrX:421980-422080 6.28e-02 100 chrXV:624118-624466 8.97e-01 100 chrII:88085-88564 9.81e-01 100 chrXVI:209951-210490 2.35e-07 23_[+2(2.94e-11)]_50 chrXVI:810446-810899 5.54e-06 61_[+1(1.63e-09)]_18 chrIII:30-568 3.79e-05 1_[+3(9.89e-05)]_[+3(8.87e-07)]_8_\ [+3(6.20e-08)]_[+3(6.20e-08)]_1_[+3(8.87e-07)]_2_[+3(1.70e-05)]_10 chrII:256249-256679 5.35e-01 100 chrXVI:520167-520534 9.02e-04 32_[-3(9.30e-05)]_18_[+3(1.83e-05)]_\ 24 chrVIII:62551-62971 3.73e-01 100 chrVII:826893-827323 5.89e-01 100 chrXIV:21904-22334 8.19e-01 100 chrVI:221743-222093 1.80e-03 51_[-3(2.14e-06)]_36 chrIX:174832-175332 3.17e-13 6_[+1(8.74e-11)]_15_[-2(2.57e-10)]_\ 31 chrXV:337614-338044 8.99e-01 100 chrIV:83338-83767 1.51e-04 45_[+1(2.27e-07)]_34 chrIV:491720-491912 8.85e-01 100 chrIV:1525310-1525694 7.70e-01 100 chrXI:284379-284751 5.66e-02 100 chrXV:353844-354306 3.04e-13 17_[+2(2.57e-10)]_15_[-1(8.74e-11)]_\ 20 chrXIII:837695-838192 2.21e-03 42_[+1(8.31e-07)]_37 chrXV:1028626-1029179 6.00e-03 54_[-3(1.02e-06)]_33 chrVI:137262-137766 1.16e-11 23_[+2(9.96e-10)]_16_[-1(1.63e-09)]_\ 13 chrIV:439641-440071 8.26e-01 100 chrVII:311880-312192 3.05e-01 100 chrXI:140754-141322 2.35e-07 31_[+2(2.94e-11)]_42 chrIX:324093-324565 4.31e-07 25_[+2(2.30e-10)]_48 chrVIII:237687-238184 2.88e-04 25_[-1(3.98e-07)]_54 chrIII:168157-168563 2.16e-02 33_[-1(7.51e-05)]_46 chrXIII:183749-184154 5.21e-04 46_[-1(2.27e-07)]_33 chrXIII:379169-379597 1.64e-01 100 chrXVI:819297-819776 4.12e-07 50_[+1(1.63e-11)]_29 chrIV:218384-218692 3.99e-01 100 chrX:690467-690567 1.38e-05 82_[+3(3.59e-09)]_5 chrVII:479247-479977 2.28e-02 70_[-3(2.12e-05)]_17 chrV:13465-13895 1.35e-01 100 chrIX:197381-197766 9.06e-01 100 chrIV:308012-308382 4.95e-02 56_[+3(6.69e-05)]_7_[+3(2.12e-05)]_\ 11 chrVII:876161-876692 2.03e-12 25_[+1(2.67e-07)]_15_[-2(3.48e-12)]_\ 12 chrXV:81132-81562 2.56e-03 9_[-3(2.30e-05)]_78 chrXIV:560451-561017 3.17e-13 10_[+2(2.57e-10)]_15_[-1(8.74e-11)]_\ 27 chrXII:199239-199617 4.50e-01 100 chrXII:638463-638722 2.79e-01 100 chrX:156916-157016 8.01e-01 100 chrV:207118-207634 2.31e-04 73_[-2(7.10e-08)] chrV:424744-425174 1.18e-01 100 chrV:492175-492613 1.11e-08 9_[+2(1.22e-08)]_15_[-1(2.27e-07)]_\ 28 chrIV:884170-884606 6.08e-03 30_[+1(4.54e-06)]_49 chrXIII:195881-196428 1.79e-04 45_[-1(5.80e-07)]_34 chrIV:626442-626872 4.31e-01 100 chrV:13390-13514 1.22e-03 30_[+3(3.11e-07)]_57 chrXIII:5285-5822 3.86e-05 39_[+3(6.20e-08)]_6_[+3(6.20e-08)]_\ [+3(6.20e-08)]_16 chrXV:1025725-1026042 6.14e-03 42_[+3(2.60e-06)]_45 chrXI:458364-458929 1.77e-01 100 chrXII:150034-150464 4.90e-01 100 chrV:434335-434821 2.31e-04 14_[+2(7.10e-08)]_59 chrXIV:6485-6889 1.81e-05 2_[+3(6.20e-08)]_12_[+3(6.20e-08)]_\ 1_[+3(2.87e-06)]_46 chrXII:587405-587835 1.35e-01 43_[+3(4.42e-05)]_44 chrXVI:856706-857103 6.13e-06 55_[+1(1.83e-08)]_24 chrII:405644-406188 1.70e-08 54_[-2(4.06e-12)]_19 chrXII:48694-49103 2.66e-02 54_[-3(1.01e-05)]_33 chrX:415826-415926 1.16e-01 17_[-2(5.42e-05)]_56 chrXI:308009-308403 2.75e-04 32_[-1(5.80e-08)]_47 chrXI:426853-427283 9.76e-01 100 chrXII:818425-818819 1.31e-01 100 chrIII:140853-141283 2.56e-01 100 chrVIII:148945-149293 8.92e-04 12_[-3(1.74e-06)]_75 chrVII:609489-609773 1.21e-01 50_[-3(8.71e-05)]_37 chrVII:422881-423349 8.73e-06 34_[+1(7.11e-09)]_45 chrXV:36183-36613 4.20e-01 100 chrVII:932281-932711 8.56e-01 100 chrXII:922104-922554 7.48e-05 39_[+3(7.02e-06)]_13_[+3(3.48e-07)]_\ 22 chrIV:356469-356899 1.33e-01 100 chrX:523831-523931 1.53e-06 46_[-1(2.35e-10)]_33 chrII:169323-169593 9.96e-01 100 chrIV:1302066-1302334 8.68e-01 100 chrX:390879-390979 8.49e-07 [+2(4.41e-10)]_73 chrIV:358093-358432 4.99e-03 36_[-3(8.87e-07)]_51 chrVII:799932-800362 8.05e-01 100 chrVII:401399-401811 6.22e-01 100 chrX:424329-424429 2.32e-06 10_[-1(1.22e-09)]_69 chrXV:901551-901981 6.11e-01 100 chrIV:1326601-1327031 9.78e-01 100 chrV:99909-100378 1.32e-01 100 chrVII:438580-438911 1.36e-02 39_[-3(4.33e-06)]_10_[-3(2.60e-06)]_\ 25 chrXII:687623-688156 6.94e-10 21_[+2(2.78e-09)]_16_[-1(5.80e-08)]_\ 15 chrVII:788317-788763 6.27e-03 38_[-3(2.14e-06)]_49 chrXV:332896-333326 4.90e-01 100 chrV:435629-436045 4.99e-04 8_[-1(2.67e-07)]_71 chrXIII:123637-124067 7.89e-01 100 chrXV:620254-620489 5.38e-01 100 chrXIV:169809-169919 1.29e-01 4_[-3(4.75e-05)]_83 chrVII:561414-561983 1.10e-07 66_[-1(2.35e-10)]_13 chrVI:157732-158208 5.06e-04 19_[-1(4.49e-05)]_18_[-1(3.98e-07)]_\ 21 chrIV:1524618-1524897 9.11e-01 100 chrXIII:650793-651104 2.42e-04 82_[+3(1.07e-07)]_5 chrVI:149426-149856 9.23e-01 100 chrII:88943-89373 8.85e-01 100 chrXII:931024-931454 7.51e-02 100 chrX:212336-212436 9.72e-01 100 chrXI:158206-158606 4.22e-02 43_[+3(1.55e-05)]_8_[+3(7.63e-05)]_\ 23 chrXII:1038740-1038925 7.91e-01 100 chrX:354049-354149 4.26e-05 43_[-2(4.67e-09)]_30 chrIV:1450895-1451245 1.78e-02 62_[-3(5.77e-06)]_25 chrXII:522160-522442 8.12e-03 26_[+3(7.68e-06)]_12_[+3(1.02e-06)]_\ 36 chrXI:302667-303228 2.83e-01 100 chrXIV:241391-241734 2.70e-02 50_[+3(2.68e-05)]_37 chrVII:727684-728064 9.82e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************