******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR8/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:477062-477438 1.0000 100 chrIX:336186-336628 1.0000 100 chrVII:533785-534165 1.0000 100 chrXIII:372312-372701 1.0000 100 chrVIII:411206-411515 1.0000 100 chrXIII:551360-551799 1.0000 100 chrII:326620-327101 1.0000 100 chrX:349240-349340 1.0000 100 chrXV:409655-410035 1.0000 100 chrXI:140767-141300 1.0000 100 chrXVI:775644-776019 1.0000 100 chrXVI:404583-404824 1.0000 100 chrVIII:562283-562620 1.0000 100 chrIV:221969-222331 1.0000 100 chrIX:79606-79986 1.0000 100 chrI:166050-166608 1.0000 100 chrVIII:353374-353551 1.0000 100 chrIV:359370-359878 1.0000 100 chrVII:482695-483000 1.0000 100 chrV:354715-355275 1.0000 100 chrXVI:405145-405477 1.0000 100 chrXVI:302643-302982 1.0000 100 chrIV:1359367-1359792 1.0000 100 chrIII:30583-30811 1.0000 100 chrXII:811018-811398 1.0000 100 chrV:438503-438911 1.0000 100 chrXV:623215-623595 1.0000 100 chrIII:177221-177503 1.0000 100 chrXI:74442-74841 1.0000 100 chrIV:830278-830658 1.0000 100 chrV:214704-215084 1.0000 100 chrXIII:183759-184136 1.0000 100 chrXIII:632777-633157 1.0000 100 chrVIII:556678-557205 1.0000 100 chrV:138446-138963 1.0000 100 chrIV:117857-118237 1.0000 100 chrXIV:96047-96488 1.0000 100 chrXIII:752976-753356 1.0000 100 chrXIII:195922-196395 1.0000 100 chrXII:638481-638758 1.0000 100 chrXIV:330799-331112 1.0000 100 chrXIII:552892-553190 1.0000 100 chrXV:340112-340586 1.0000 100 chrXV:113622-114009 1.0000 100 chrIV:356584-356964 1.0000 100 chrXVI:795769-795930 1.0000 100 chrV:301579-301959 1.0000 100 chrXV:161725-162105 1.0000 100 chrIX:300076-300519 1.0000 100 chrXV:1004932-1005312 1.0000 100 chrXV:573-1026 1.0000 100 chrVII:845457-845881 1.0000 100 chrII:60080-60460 1.0000 100 chrII:6543-6718 1.0000 100 chrV:130926-131349 1.0000 100 chrVII:149114-149520 1.0000 100 chrVII:228536-228808 1.0000 100 chrVII:774128-774621 1.0000 100 chrXV:179582-179962 1.0000 100 chrXII:448511-448941 1.0000 100 chrIV:1062878-1063074 1.0000 100 chrXII:202762-202885 1.0000 100 chrX:139353-139453 1.0000 100 chrVIII:361749-362044 1.0000 100 chrX:115756-115856 1.0000 100 chrVII:823280-823680 1.0000 100 chrXIV:726019-726399 1.0000 100 chrV:269193-269573 1.0000 100 chrIV:1270382-1270762 1.0000 100 chrXIII:146744-147124 1.0000 100 chrXIV:229866-230073 1.0000 100 chrXII:875234-875637 1.0000 100 chrXII:369300-369644 1.0000 100 chrIX:439108-439328 1.0000 100 chrXII:930885-931004 1.0000 100 chrVI:64898-65358 1.0000 100 chrX:233743-233843 1.0000 100 chrIX:231295-231459 1.0000 100 chrIV:358101-358428 1.0000 100 chrVII:346225-346426 1.0000 100 chrXIII:754415-754793 1.0000 100 chrIV:471200-471580 1.0000 100 chrIII:178309-178685 1.0000 100 chrX:121752-121852 1.0000 100 chrXVI:794482-794803 1.0000 100 chrIV:118510-118707 1.0000 100 chrV:267965-268345 1.0000 100 chrXIII:504692-505226 1.0000 100 chrXI:55560-55940 1.0000 100 chrIII:30-530 1.0000 100 chrXII:214761-215165 1.0000 100 chrX:531624-531724 1.0000 100 chrXIII:226747-227127 1.0000 100 chrXV:161119-161403 1.0000 100 chrV:52452-52662 1.0000 100 chrV:225410-225741 1.0000 100 chrX:440797-440897 1.0000 100 chrXII:1019008-1019391 1.0000 100 chrXII:1040926-1041306 1.0000 100 chrXVI:281559-281921 1.0000 100 chrVII:730942-731417 1.0000 100 chrXI:766-1012 1.0000 100 chrXIII:784328-784708 1.0000 100 chrXI:340511-340891 1.0000 100 chrXII:838082-838293 1.0000 100 chrXII:5470-5885 1.0000 100 chrXIII:586491-586879 1.0000 100 chrVIII:80358-80738 1.0000 100 chrXVI:173026-173269 1.0000 100 chrIII:305583-305963 1.0000 100 chrVII:25429-25565 1.0000 100 chrII:226861-227381 1.0000 100 chrII:197300-197880 1.0000 100 chrXI:202825-203190 1.0000 100 chrX:157454-157554 1.0000 100 chrX:353404-353504 1.0000 100 chrIV:1239787-1240167 1.0000 100 chrXII:932075-932511 1.0000 100 chrXV:744048-744428 1.0000 100 chrXVI:572067-572532 1.0000 100 chrVII:229830-230210 1.0000 100 chrXI:162296-162743 1.0000 100 chrX:415840-415940 1.0000 100 chrIV:321667-321975 1.0000 100 chrX:541315-541415 1.0000 100 chrXII:242352-242732 1.0000 100 chrVII:364018-364398 1.0000 100 chrXI:618785-619215 1.0000 100 chrVII:1000333-1000577 1.0000 100 chrM:61056-61409 1.0000 100 chrXV:960168-960548 1.0000 100 chrVIII:452615-452831 1.0000 100 chrV:6167-6554 1.0000 100 chrIV:428434-428549 1.0000 100 chrXII:441302-441682 1.0000 100 chrXVI:744081-744557 1.0000 100 chrXVI:731934-732322 1.0000 100 chrIV:323024-323288 1.0000 100 chrVII:311188-311566 1.0000 100 chrV:443132-443511 1.0000 100 chrXVI:718594-718897 1.0000 100 chrXVI:577252-577632 1.0000 100 chrVII:919953-920210 1.0000 100 chrXI:426874-427254 1.0000 100 chrVIII:134102-134547 1.0000 100 chrVI:221733-222083 1.0000 100 chrX:391885-391985 1.0000 100 chrVI:226532-226930 1.0000 100 chrVII:365018-365149 1.0000 100 chrV:85146-85428 1.0000 100 chrI:73284-73664 1.0000 100 chrIV:309381-309761 1.0000 100 chrIV:217163-217573 1.0000 100 chrX:424367-424467 1.0000 100 chrXIII:131570-132081 1.0000 100 chrII:9373-9791 1.0000 100 chrX:156778-156878 1.0000 100 chrXVI:406202-406579 1.0000 100 chrXIII:352086-352441 1.0000 100 chrIII:315844-315997 1.0000 100 chrX:197177-197277 1.0000 100 chrIV:1300943-1301331 1.0000 100 chrXVI:188617-188930 1.0000 100 chrX:139987-140087 1.0000 100 chrIV:45988-46134 1.0000 100 chrXV:92914-93388 1.0000 100 chrIX:99629-100034 1.0000 100 chrXVI:767139-767519 1.0000 100 chrXII:522155-522446 1.0000 100 chrXII:1029740-1030120 1.0000 100 chrVII:788318-788751 1.0000 100 chrXI:309399-309779 1.0000 100 chrVII:422914-423342 1.0000 100 chrIV:579814-580001 1.0000 100 chrXI:67769-68029 1.0000 100 chrXVI:184949-185329 1.0000 100 chrXIV:499308-499621 1.0000 100 chrXI:29-227 1.0000 100 chrXI:614096-614476 1.0000 100 chrVII:25505-25885 1.0000 100 chrIII:168171-168546 1.0000 100 chrXVI:856724-857071 1.0000 100 chrX:617722-617822 1.0000 100 chrXII:590614-590994 1.0000 100 chrXII:710632-710845 1.0000 100 chrXII:796404-796881 1.0000 100 chrI:29-213 1.0000 100 chrX:675827-675927 1.0000 100 chrXII:780907-781182 1.0000 100 chrVII:738893-739312 1.0000 100 chrXV:624286-624471 1.0000 100 chrX:703291-703391 1.0000 100 chrV:408839-409219 1.0000 100 chrII:60760-61285 1.0000 100 chrVII:783853-784233 1.0000 100 chrVII:930794-931237 1.0000 100 chrXVI:860191-860573 1.0000 100 chrXII:796965-797376 1.0000 100 chrIX:294024-294404 1.0000 100 chrXV:110831-111261 1.0000 100 chrX:390905-391005 1.0000 100 chrXVI:433929-434309 1.0000 100 chrXVI:581886-582388 1.0000 100 chrII:504547-504706 1.0000 100 chrVIII:74929-75419 1.0000 100 chrIX:27-235 1.0000 100 chrVI:101179-101609 1.0000 100 chrII:165974-166354 1.0000 100 chrVII:545583-545963 1.0000 100 chrV:52165-52362 1.0000 100 chrXII:897670-898031 1.0000 100 chrXV:93839-94034 1.0000 100 chrVI:222979-223359 1.0000 100 chrXI:114806-115186 1.0000 100 chrVIII:237705-238143 1.0000 100 chrX:76021-76121 1.0000 100 chrIV:1489222-1489577 1.0000 100 chrVIII:382450-382565 1.0000 100 chrIV:1354606-1354775 1.0000 100 chrM:6776-6950 1.0000 100 chrXII:11066-11509 1.0000 100 chrXV:464219-464683 1.0000 100 chrXV:1004009-1004403 1.0000 100 chrX:139636-139736 1.0000 100 chrII:405650-406159 1.0000 100 chrIV:492356-492543 1.0000 100 chrVIII:475540-475950 1.0000 100 chrVII:255266-255646 1.0000 100 chrXIV:6468-6847 1.0000 100 chrXVI:781329-781709 1.0000 100 chrX:607833-607933 1.0000 100 chrXIII:5315-5762 1.0000 100 chrIV:341255-341637 1.0000 100 chrVIII:388753-389208 1.0000 100 chrII:234984-235364 1.0000 100 chrII:266198-266681 1.0000 100 chrXV:87611-87715 1.0000 100 chrXI:218214-218594 1.0000 100 chrV:321968-322297 1.0000 100 chrXV:445829-446112 1.0000 100 chrVII:185523-185960 1.0000 100 chrIX:325548-325998 1.0000 100 chrXV:421778-422158 1.0000 100 chrVII:736162-736583 1.0000 100 chrXV:978097-978477 1.0000 100 chrXV:709994-710392 1.0000 100 chrV:300819-301199 1.0000 100 chrXV:446735-447019 1.0000 100 chrIII:992-1313 1.0000 100 chrIII:11063-11451 1.0000 100 chrXIII:888705-888934 1.0000 100 chrXIII:225350-225725 1.0000 100 chrXV:1027998-1028183 1.0000 100 chrVI:191325-191816 1.0000 100 chrIV:1152837-1153217 1.0000 100 chrIV:425627-426007 1.0000 100 chrVII:319598-320053 1.0000 100 chrI:742-970 1.0000 100 chrIV:652708-653088 1.0000 100 chrI:180960-181481 1.0000 100 chrXV:506390-506770 1.0000 100 chrXV:678820-679190 1.0000 100 chrXVI:520177-520525 1.0000 100 chrXIII:747740-748148 1.0000 100 chrVIII:125903-126306 1.0000 100 chrXII:640039-640134 1.0000 95 chrX:121535-121635 1.0000 100 chrIV:332216-332596 1.0000 100 chrXVI:866474-866671 1.0000 100 chrXV:1070973-1071069 1.0000 96 chrXII:241604-242008 1.0000 100 chrIV:52-301 1.0000 100 chrVIII:126563-126943 1.0000 100 chrIV:519551-519954 1.0000 100 chrVII:328368-328940 1.0000 100 chrXVI:745396-745776 1.0000 100 chrXV:970914-971294 1.0000 100 chrXIII:500901-501072 1.0000 100 chrII:46400-46522 1.0000 100 chrVIII:463700-464080 1.0000 100 chrVII:609593-609698 1.0000 100 chrIV:667788-668260 1.0000 100 chrXII:794209-795114 1.0000 100 chrIV:490924-491280 1.0000 100 chrX:523889-523989 1.0000 100 chrXV:780418-780805 1.0000 100 chrII:604134-604500 1.0000 100 chrIII:292625-292962 1.0000 100 chrXV:438439-438934 1.0000 100 chrXVI:435665-436181 1.0000 100 chrM:59522-59795 1.0000 100 chrVI:95472-95811 1.0000 100 chrII:350621-350970 1.0000 100 chrIX:254250-254543 1.0000 100 chrXI:108710-109082 1.0000 100 chrVIII:466769-467214 1.0000 100 chrXIV:166954-167334 1.0000 100 chrII:592892-593280 1.0000 100 chrXII:838580-838960 1.0000 100 chrII:415490-415888 1.0000 100 chrV:363702-364082 1.0000 100 chrIV:1175641-1176152 1.0000 100 chrIX:324077-324553 1.0000 100 chrXV:424387-424674 1.0000 100 chrXIV:102518-102935 1.0000 100 chrXIII:650805-651143 1.0000 100 chrVI:64133-64513 1.0000 100 chrXVI:338742-339074 1.0000 100 chrX:349040-349140 1.0000 100 chrXIII:808062-808524 1.0000 100 chrIV:1152638-1153018 1.0000 100 chrIII:16202-16582 1.0000 100 chrX:355148-355248 1.0000 100 chrXI:617767-617928 1.0000 100 chrIV:1278719-1278911 1.0000 100 chrXII:628171-628670 1.0000 100 chrVII:10191-10416 1.0000 100 chrXIII:426126-426506 1.0000 100 chrV:397594-397974 1.0000 100 chrII:44977-45336 1.0000 100 chrXIV:585906-586237 1.0000 100 chrII:414845-415225 1.0000 100 chrVI:134065-134445 1.0000 100 chrVI:167264-167699 1.0000 100 chrV:441807-442621 1.0000 100 chrIII:191598-191978 1.0000 100 chrVII:805154-805534 1.0000 100 chrII:613919-614299 1.0000 100 chrXIV:560509-560975 1.0000 100 chrXIV:230516-230896 1.0000 100 chrIX:257369-257731 1.0000 100 chrII:347422-347890 1.0000 100 chrXII:731875-732283 1.0000 100 chrIV:619743-620217 1.0000 100 chrXVI:304130-304272 1.0000 100 chrXV:882625-883005 1.0000 100 chrIV:980839-981261 1.0000 100 chrIV:229479-229813 1.0000 100 chrVI:83975-84162 1.0000 100 chrXII:592372-592845 1.0000 100 chrVIII:381646-382026 1.0000 100 chrVII:534740-535251 1.0000 100 chrIV:946136-946582 1.0000 100 chrIV:339083-339463 1.0000 100 chrXII:637300-637680 1.0000 100 chrXV:274495-274936 1.0000 100 chrXV:300862-301379 1.0000 100 chrVII:278342-278722 1.0000 100 chrII:181330-181625 1.0000 100 chrVII:700496-701260 1.0000 100 chrII:544576-544765 1.0000 100 chrVII:876199-876683 1.0000 100 chrXIV:722947-723327 1.0000 100 chrVII:479441-479679 1.0000 100 chrVII:883584-883964 1.0000 100 chrXII:1051910-1052334 1.0000 100 chrXII:369486-369866 1.0000 100 chrVI:210462-210894 1.0000 100 chrVIII:382918-383369 1.0000 100 chrXII:953066-953446 1.0000 100 chrX:451103-451203 1.0000 100 chrI:72509-72889 1.0000 100 chrXI:551350-551545 1.0000 100 chrV:288278-288741 1.0000 100 chrXII:953274-953654 1.0000 100 chrV:434399-434791 1.0000 100 chrIX:248639-249000 1.0000 100 chrIII:127535-127899 1.0000 100 chrVII:479646-479854 1.0000 100 chrXII:366041-366483 1.0000 100 chrVIII:115971-116367 1.0000 100 chrVII:857275-857650 1.0000 100 chrIV:340364-340606 1.0000 100 chrXV:281961-282381 1.0000 100 chrXII:498498-498972 1.0000 100 chrVIII:505162-505542 1.0000 100 chrVI:4674-4971 1.0000 100 chrVII:26-177 1.0000 100 chrXV:159424-159804 1.0000 100 chrVIII:132859-133332 1.0000 100 chrIX:210486-210890 1.0000 100 chrXII:650991-651257 1.0000 100 chrVII:110435-110895 1.0000 100 chrXIV:587921-588301 1.0000 100 chrV:322487-322723 1.0000 100 chrXII:922129-922555 1.0000 100 chrIII:14524-14753 1.0000 100 chrIII:123415-123808 1.0000 100 chrXVI:172828-173091 1.0000 100 chrIV:1095161-1095647 1.0000 100 chrXIV:374701-375079 1.0000 100 chrVIII:463902-464282 1.0000 100 chrVI:162021-162421 1.0000 100 chrIV:1352342-1352756 1.0000 100 chrIV:83372-83736 1.0000 100 chrXV:160338-160718 1.0000 100 chrXV:253798-254114 1.0000 100 chrXII:374176-374703 1.0000 100 chrIV:1525328-1525650 1.0000 100 chrXV:159710-160090 1.0000 100 chrIX:317893-318273 1.0000 100 chrXVI:210011-210488 1.0000 100 chrXIII:145887-146281 1.0000 100 chrXII:426955-427410 1.0000 100 chrIV:130579-130981 1.0000 100 chrX:354046-354146 1.0000 100 chrII:395136-395289 1.0000 100 chrV:250118-250550 1.0000 100 chrIV:410210-410565 1.0000 100 chrXV:571729-572191 1.0000 100 chrVII:291670-291854 1.0000 100 chrXII:370665-370881 1.0000 100 chrVIII:34677-35057 1.0000 100 chrVIII:505805-506198 1.0000 100 chrIV:1021673-1022053 1.0000 100 chrVIII:103893-104271 1.0000 100 chrV:140431-140867 1.0000 100 chrVIII:511918-512298 1.0000 100 chrVII:227759-228139 1.0000 100 chrXV:663586-664074 1.0000 100 chrXV:353873-354290 1.0000 100 chrIV:411281-411621 1.0000 100 chrV:207143-207599 1.0000 100 chrII:88125-88476 1.0000 100 chrV:469268-469664 1.0000 100 chrXIV:575297-575628 1.0000 100 chrX:374204-374304 1.0000 100 chrV:61555-62157 1.0000 100 chrII:413961-414341 1.0000 100 chrVIII:35406-35786 1.0000 100 chrXV:77926-78306 1.0000 100 chrXII:499372-499585 1.0000 100 chrVII:727761-728062 1.0000 100 chrXVI:821636-821792 1.0000 100 chrIV:392470-392850 1.0000 100 chrXII:589078-589248 1.0000 100 chrVIII:556112-556492 1.0000 100 chrXV:977896-978276 1.0000 100 chrXIII:259011-259459 1.0000 100 chrVII:541631-542159 1.0000 100 chrII:89028-89408 1.0000 100 chrV:145626-146006 1.0000 100 chrVII:534040-534420 1.0000 100 chrXI:326868-327248 1.0000 100 chrV:430990-431581 1.0000 100 chrIV:453568-453948 1.0000 100 chrVII:311950-312178 1.0000 100 chrXIII:887577-887957 1.0000 100 chrIV:456558-456938 1.0000 100 chrXVI:378667-379000 1.0000 100 chrXVI:76339-76714 1.0000 100 chrVIII:85204-85546 1.0000 100 chrVII:67231-67593 1.0000 100 chrIV:1201524-1202023 1.0000 100 chrXII:805480-805771 1.0000 100 chrIV:1449851-1450231 1.0000 100 chrXI:159136-159516 1.0000 100 chrVII:794226-794626 1.0000 100 chrVII:779399-779858 1.0000 100 chrI:182404-182786 1.0000 100 chrIV:1240755-1241135 1.0000 100 chrVII:806808-807188 1.0000 100 chrX:378167-378267 1.0000 100 chrI:229434-229709 1.0000 100 chrXVI:575109-575489 1.0000 100 chrIV:42441-42583 1.0000 100 chrXV:323085-323465 1.0000 100 chrVI:157755-158204 1.0000 100 chrXIII:761887-762226 1.0000 100 chrVII:287206-287654 1.0000 100 chrVIII:555910-556290 1.0000 100 chrV:270367-270696 1.0000 100 chrI:142139-142519 1.0000 100 chrIII:295299-295744 1.0000 100 chrVIII:115392-115772 1.0000 100 chrIX:197409-197760 1.0000 100 chrXI:379500-379939 1.0000 100 chrXV:551941-552321 1.0000 100 chrXVI:377992-378372 1.0000 100 chrXV:505096-505493 1.0000 100 chrXII:48682-49111 1.0000 100 chrV:99940-100372 1.0000 100 chrXIII:379133-379588 1.0000 100 chrXIV:169646-170026 1.0000 100 chrXIV:25162-25542 1.0000 100 chrXV:678076-678226 1.0000 100 chrIV:125389-125578 1.0000 100 chrXVI:622312-622820 1.0000 100 chrIV:802547-803007 1.0000 100 chrX:74746-74846 1.0000 100 chrV:305729-306192 1.0000 100 chrM:59686-60066 1.0000 100 chrXII:856105-856485 1.0000 100 chrV:551145-551543 1.0000 100 chrXVI:278817-279197 1.0000 100 chrXIV:546916-547378 1.0000 100 chrXI:283208-283588 1.0000 100 chrIV:1401239-1401603 1.0000 100 chrXV:976179-976685 1.0000 100 chrXVI:340491-340871 1.0000 100 chrII:644990-645418 1.0000 100 chrXI:326516-326638 1.0000 100 chrXII:687646-688135 1.0000 100 chrI:92533-92913 1.0000 100 chrXIII:463360-463919 1.0000 100 chrXV:250832-251212 1.0000 100 chrVII:545508-545647 1.0000 100 chrIX:174846-175343 1.0000 100 chrIV:355526-355695 1.0000 100 chrXII:637087-637467 1.0000 100 chrIV:520752-521137 1.0000 100 chrVIII:80158-80538 1.0000 100 chrXV:867615-867995 1.0000 100 chrXII:818435-818786 1.0000 100 chrIII:147881-148261 1.0000 100 chrI:81919-82269 1.0000 100 chrXIII:224053-224386 1.0000 100 chrVII:555316-555684 1.0000 100 chrM:60584-60932 1.0000 100 chrXVI:699946-700389 1.0000 100 chrVII:557695-557903 1.0000 100 chrVII:73706-74117 1.0000 100 chrXV:832514-832662 1.0000 100 chrXVI:560018-560502 1.0000 100 chrVII:401368-401776 1.0000 100 chrI:138953-139382 1.0000 100 chrXV:1004704-1005084 1.0000 100 chrIV:992591-993005 1.0000 100 chrXIII:500059-500167 1.0000 100 chrXI:158213-158642 1.0000 100 chrVII:882506-882846 1.0000 100 chrIV:539009-539198 1.0000 100 chrVII:706957-707357 1.0000 100 chrI:72310-72690 1.0000 100 chrX:75317-75417 1.0000 100 chrV:135195-135717 1.0000 100 chrXIII:267924-268255 1.0000 100 chrII:332295-332760 1.0000 100 chrIV:1075305-1075718 1.0000 100 chrXI:46669-46990 1.0000 100 chrXV:968094-968390 1.0000 100 chrIX:370210-370651 1.0000 100 chrXII:964750-965130 1.0000 100 chrII:557555-557677 1.0000 100 chrXVI:201181-201561 1.0000 100 chrII:36217-36579 1.0000 100 chrIV:1259656-1259864 1.0000 100 chrXIII:290583-291072 1.0000 100 chrVII:726424-726759 1.0000 100 chrXI:665938-666126 1.0000 100 chrVII:544398-544838 1.0000 100 chrVII:828507-828990 1.0000 100 chrXII:199285-199608 1.0000 100 chrXV:421977-422357 1.0000 100 chrXVI:55884-56502 1.0000 100 chrXII:793728-794138 1.0000 100 chrXV:900099-900479 1.0000 100 chrVII:481951-482135 1.0000 100 chrXI:84015-84406 1.0000 100 chrX:451308-451408 1.0000 100 chrXII:262787-263150 1.0000 100 chrXIII:712081-712308 1.0000 100 chrVII:227559-227939 1.0000 100 chrII:165084-165395 1.0000 100 chrX:535986-536086 1.0000 100 chrXI:26102-26482 1.0000 100 chrVI:180711-181209 1.0000 100 chrVIII:400956-401336 1.0000 100 chrVII:826943-827323 1.0000 100 chrVII:878616-879013 1.0000 100 chrXII:713078-713567 1.0000 100 chrXIII:91794-92071 1.0000 100 chrIII:162506-162727 1.0000 100 chrVII:483310-483690 1.0000 100 chrXII:781454-781846 1.0000 100 chrXIV:104627-105128 1.0000 100 chrVIII:386521-386901 1.0000 100 chrIV:1016985-1017492 1.0000 100 chrVII:122083-122465 1.0000 100 chrXIV:783885-784174 1.0000 100 chrXV:718340-718720 1.0000 100 chrXI:308002-308415 1.0000 100 chrXII:1064870-1065353 1.0000 100 chrVIII:148943-149293 1.0000 100 chrV:117937-118302 1.0000 100 chrIV:1256917-1257283 1.0000 100 chrIV:306732-306847 1.0000 100 chrIV:663-762 1.0000 99 chrIV:437529-437983 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR8/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR8/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR8/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 589 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58890 N= 589 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.311 C 0.189 G 0.189 T 0.311 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR8/background): A 0.321 C 0.179 G 0.179 T 0.321 ******************************************************************************** ******************************************************************************** MOTIF SGGRRTCGAACCSVKGWYCYY MEME-1 width = 21 sites = 94 llr = 1640 E-value = 4.5e-331 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGWYCYY MEME-1 Description -------------------------------------------------------------------------------- Simplified A 12:64:::aa::13:36:::1 pos.-specific C 3:::1:7:::a8641::6634 probability G 67a43::a::::33571:111 matrix T ::::2a3::::21:3:34264 bits 2.5 * * * 2.2 * * * 2.0 * * * 1.7 * * **** Relative 1.5 * ****** Entropy 1.2 ** ******* * * (25.2 bits) 1.0 **** ******* * * 0.7 **** ******** ** ** 0.5 **** *************** 0.2 ********************* 0.0 --------------------- Multilevel GGGAATCGAACCCCGGACCTC consensus CA GG T GGTATTTCT sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGWYCYY MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123415-123808 + 26 4.36e-13 GGGGCGAGCC GGGACTCGAACCCGGGACCTC CCGCACCCTA chrIV:1016985-1017492 + 29 1.25e-11 CTCCGAAGCG GGGAGTCGAACCCCGGTCTCC ACGGTGAGAA chrXIII:290583-291072 - 65 1.25e-11 CTCCGCTACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrIX:370210-370651 - 78 1.25e-11 CG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVII:401368-401776 + 15 1.25e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrII:644990-645418 - 54 1.25e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVII:541631-542159 - 46 1.25e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrXVI:210011-210488 + 3 1.25e-11 CG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVII:328368-328940 - 20 1.25e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrX:115756-115856 + 24 1.25e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrV:354715-355275 - 30 1.25e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrXI:140767-141300 + 45 1.25e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrV:551145-551543 + 1 5.50e-11 . CGGGATCGAACCGCTGATCCC CGCGTTATTA chrIX:210486-210890 - 70 5.50e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrXII:1051910-1052334 + 9 5.50e-11 GTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrIV:667788-668260 + 43 5.50e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrI:166050-166608 - 30 6.67e-11 TGGACGCAAC CGGAATCGAACCGATGACCTC TTCCTTGCAA chrV:135195-135717 + 29 1.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrIV:1201524-1202023 - 69 1.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVII:876199-876683 - 45 1.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVII:185523-185960 + 33 1.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrXVI:581886-582388 - 17 1.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVI:226532-226930 + 17 1.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVII:779399-779858 - 79 1.46e-10 C GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrXIV:96047-96488 + 34 1.46e-10 TGAGCGGTAC GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrXIV:546916-547378 - 69 3.09e-10 GGGGCGAGCT GGGAATTGAACCCAGGGCCTC TCGCATGCTT chrIV:1075305-1075718 + 21 5.41e-10 TGTTCCAACC GAGGATCGAACTCGGGACCTT TGCCGTGTGA chrVIII:475540-475950 + 21 5.41e-10 TGTTCCAACC GAGGATCGAACTCGGGACCTT TGCCGTGTGA chrVII:828507-828990 + 35 6.19e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrX:355148-355248 - 29 6.19e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrXIII:747740-748148 + 8 6.19e-10 TCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrVII:736162-736583 - 59 6.19e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrII:405650-406159 - 65 6.19e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrXIII:131570-132081 + 60 6.19e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrXI:162296-162743 + 28 6.19e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrV:138446-138963 - 53 6.19e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrVI:180711-181209 + 74 7.05e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATG chrXVI:572067-572532 - 60 7.05e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrX:531624-531724 - 22 7.05e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrVII:845457-845881 - 70 7.05e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrXIII:183759-184136 + 11 7.05e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrIV:802547-803007 + 14 1.70e-09 AGGTCCTACC CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrV:250118-250550 - 43 1.70e-09 AGGTCCTACC CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrXV:438439-438934 - 72 1.70e-09 CCTCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrIII:168171-168546 + 3 1.70e-09 CC CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrXII:875234-875637 - 56 1.70e-09 CTCCTCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrIV:359370-359878 - 68 1.70e-09 CTCCTCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrVII:774128-774621 - 67 1.91e-09 TGGACGAGTC CGGAATCGAACCGGAGACCTC TCCCATGCTA chrV:130926-131349 + 5 3.39e-09 TACC CGGATTCGAACCGGGGTTGTT CGGATCAAAA chrXIV:104627-105128 - 20 4.71e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrIX:174846-175343 - 29 4.71e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrIII:295299-295744 - 55 4.71e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrXV:353873-354290 + 20 4.71e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrXIV:560509-560975 + 11 4.71e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrIX:325548-325998 - 67 4.71e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrII:266198-266681 - 31 4.71e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrXV:113622-114009 - 79 4.71e-09 T CGGATTTGAACCGATGATCTC CACATTACTA chrXII:687646-688135 + 29 1.29e-08 TGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrXI:379500-379939 - 54 1.29e-08 TGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrX:378167-378267 - 79 1.29e-08 C CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrXV:663586-664074 + 42 1.29e-08 CGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrXIII:586491-586879 + 11 1.29e-08 TGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrX:354046-354146 - 44 1.71e-08 TCTCCCGGGG GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrVI:210462-210894 + 1 1.71e-08 . GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrIV:946136-946582 - 61 1.71e-08 TCTCCCGGGG GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrVI:167264-167699 - 64 1.71e-08 TCTCCCGGGG GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrXII:793728-794138 - 76 2.24e-08 GACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrVII:544398-544838 + 19 2.24e-08 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrXIII:463360-463919 - 6 2.24e-08 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGC chrX:374204-374304 + 6 2.24e-08 CGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrXII:426955-427410 - 41 2.24e-08 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrIX:324077-324553 + 48 2.24e-08 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrX:541315-541415 - 72 2.24e-08 CCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrIX:336186-336628 + 2 2.24e-08 G GGGAATTGAACCCCGATCTGG CACGCGACAA chrXIII:808062-808524 + 13 2.45e-08 AGGTCCCACC CGGATTCGAACTGGGGTTGTT CGGATCAGAA chrX:233743-233843 - 73 2.91e-08 CCCCGCC AGGACTCGAACCTGGAATCTC CTGGTTCGTA chrXVI:622312-622820 + 34 4.42e-08 TGCGAATTCT GTGGATCGAACACAGGACCTC CAGATAACTT chrIV:1095161-1095647 + 26 4.42e-08 TGCGAACTCT GTGGATCGAACACAGGACCTC CAGATATCTT chrVII:730942-731417 - 51 5.19e-08 CGACCCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrXI:74442-74841 - 76 5.19e-08 CAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrIV:1175641-1176152 - 25 1.10e-07 TGCTCCAGGG GAGGTTCGAACTCTCGACCTT CAGATTATGA chrX:390905-391005 + 3 1.10e-07 GG GAGGTTCGAACTCTCGACCTT CAGATTATGA chrXII:374176-374703 - 8 1.45e-07 CTTCCCCGCC AGGACTTGAACCTGGAATCTT CTGGTTC chrIV:619743-620217 + 49 1.45e-07 CTTCCCCGCC AGGACTTGAACCTGGAATCTT CTGGTTCGTA chrXV:340112-340586 + 10 1.45e-07 TTCCCCGCC AGGACTTGAACCTGGAATCTT CTGGTTCGTA chrXVI:55884-56502 + 36 1.66e-07 TGAAACGGAC AGGAATTGAACCTGCAACCCT TCGATTGCAA chrXIII:379133-379588 + 3 1.66e-07 AC AGGAATTGAACCTGCAACCCT TCGATTGCAA chrXVI:744081-744557 - 56 2.59e-07 TGCCACCTGT CAGAATTGAACTAACGACCTT TGCATTACAA chrV:207143-207599 - 77 3.91e-07 TCC TAGAATCGAACCAGGGTTTCA TCGGCCACAA chrVII:110435-110895 + 20 3.91e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCA TCGGCCACAA chrV:434399-434791 + 6 3.91e-07 TCTCC TAGAATCGAACCAGGGTTTCA TCGGCCACAA chrVII:319598-320053 - 47 3.91e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCA TCGGCCACAA chrVII:706957-707357 + 11 5.14e-07 AGCTCGCACT CAGGATCGAACTAAGGACCAA CAGATTTGCA chrXVI:435665-436181 + 30 5.14e-07 AGCTCGCACT CAGGATCGAACTAAGGACCAA CAGATTTGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGWYCYY MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123415-123808 4.4e-13 25_[+1]_54 chrIV:1016985-1017492 1.2e-11 28_[+1]_51 chrXIII:290583-291072 1.2e-11 64_[-1]_15 chrIX:370210-370651 1.2e-11 77_[-1]_2 chrVII:401368-401776 1.2e-11 14_[+1]_65 chrII:644990-645418 1.2e-11 53_[-1]_26 chrVII:541631-542159 1.2e-11 45_[-1]_34 chrXVI:210011-210488 1.2e-11 2_[+1]_77 chrVII:328368-328940 1.2e-11 19_[-1]_60 chrX:115756-115856 1.2e-11 23_[+1]_56 chrV:354715-355275 1.2e-11 29_[-1]_50 chrXI:140767-141300 1.2e-11 44_[+1]_35 chrV:551145-551543 5.5e-11 [+1]_79 chrIX:210486-210890 5.5e-11 69_[-1]_10 chrXII:1051910-1052334 5.5e-11 8_[+1]_71 chrIV:667788-668260 5.5e-11 42_[+1]_37 chrI:166050-166608 6.7e-11 29_[-1]_50 chrV:135195-135717 1.2e-10 28_[+1]_51 chrIV:1201524-1202023 1.2e-10 68_[-1]_11 chrVII:876199-876683 1.2e-10 44_[-1]_35 chrVII:185523-185960 1.2e-10 32_[+1]_47 chrXVI:581886-582388 1.2e-10 16_[-1]_63 chrVI:226532-226930 1.2e-10 16_[+1]_63 chrVII:779399-779858 1.5e-10 78_[-1]_1 chrXIV:96047-96488 1.5e-10 33_[+1]_46 chrXIV:546916-547378 3.1e-10 68_[-1]_11 chrIV:1075305-1075718 5.4e-10 20_[+1]_59 chrVIII:475540-475950 5.4e-10 20_[+1]_59 chrVII:828507-828990 6.2e-10 34_[+1]_45 chrX:355148-355248 6.2e-10 28_[-1]_51 chrXIII:747740-748148 6.2e-10 7_[+1]_72 chrVII:736162-736583 6.2e-10 58_[-1]_21 chrII:405650-406159 6.2e-10 64_[-1]_15 chrXIII:131570-132081 6.2e-10 59_[+1]_20 chrXI:162296-162743 6.2e-10 27_[+1]_52 chrV:138446-138963 6.2e-10 52_[-1]_27 chrVI:180711-181209 7e-10 73_[+1]_6 chrXVI:572067-572532 7e-10 59_[-1]_20 chrX:531624-531724 7e-10 21_[-1]_58 chrVII:845457-845881 7e-10 69_[-1]_10 chrXIII:183759-184136 7e-10 10_[+1]_69 chrIV:802547-803007 1.7e-09 13_[+1]_66 chrV:250118-250550 1.7e-09 42_[-1]_37 chrXV:438439-438934 1.7e-09 71_[-1]_8 chrIII:168171-168546 1.7e-09 2_[+1]_77 chrXII:875234-875637 1.7e-09 55_[-1]_24 chrIV:359370-359878 1.7e-09 67_[-1]_12 chrVII:774128-774621 1.9e-09 66_[-1]_13 chrV:130926-131349 3.4e-09 4_[+1]_75 chrXIV:104627-105128 4.7e-09 19_[-1]_60 chrIX:174846-175343 4.7e-09 28_[-1]_51 chrIII:295299-295744 4.7e-09 54_[-1]_25 chrXV:353873-354290 4.7e-09 19_[+1]_60 chrXIV:560509-560975 4.7e-09 10_[+1]_69 chrIX:325548-325998 4.7e-09 66_[-1]_13 chrII:266198-266681 4.7e-09 30_[-1]_49 chrXV:113622-114009 4.7e-09 78_[-1]_1 chrXII:687646-688135 1.3e-08 28_[+1]_51 chrXI:379500-379939 1.3e-08 53_[-1]_26 chrX:378167-378267 1.3e-08 78_[-1]_1 chrXV:663586-664074 1.3e-08 41_[+1]_38 chrXIII:586491-586879 1.3e-08 10_[+1]_69 chrX:354046-354146 1.7e-08 43_[-1]_36 chrVI:210462-210894 1.7e-08 [+1]_79 chrIV:946136-946582 1.7e-08 60_[-1]_19 chrVI:167264-167699 1.7e-08 63_[-1]_16 chrXII:793728-794138 2.2e-08 75_[-1]_4 chrVII:544398-544838 2.2e-08 18_[+1]_61 chrXIII:463360-463919 2.2e-08 5_[-1]_74 chrX:374204-374304 2.2e-08 5_[+1]_74 chrXII:426955-427410 2.2e-08 40_[-1]_39 chrIX:324077-324553 2.2e-08 47_[+1]_32 chrX:541315-541415 2.2e-08 71_[-1]_8 chrIX:336186-336628 2.2e-08 1_[+1]_78 chrXIII:808062-808524 2.4e-08 12_[+1]_67 chrX:233743-233843 2.9e-08 72_[-1]_7 chrXVI:622312-622820 4.4e-08 33_[+1]_46 chrIV:1095161-1095647 4.4e-08 25_[+1]_54 chrVII:730942-731417 5.2e-08 50_[-1]_29 chrXI:74442-74841 5.2e-08 75_[-1]_4 chrIV:1175641-1176152 1.1e-07 24_[-1]_55 chrX:390905-391005 1.1e-07 2_[+1]_77 chrXII:374176-374703 1.5e-07 7_[-1]_72 chrIV:619743-620217 1.5e-07 48_[+1]_31 chrXV:340112-340586 1.5e-07 9_[+1]_70 chrXVI:55884-56502 1.7e-07 35_[+1]_44 chrXIII:379133-379588 1.7e-07 2_[+1]_77 chrXVI:744081-744557 2.6e-07 55_[-1]_24 chrV:207143-207599 3.9e-07 76_[-1]_3 chrVII:110435-110895 3.9e-07 19_[+1]_60 chrV:434399-434791 3.9e-07 5_[+1]_74 chrVII:319598-320053 3.9e-07 46_[-1]_33 chrVII:706957-707357 5.1e-07 10_[+1]_69 chrXVI:435665-436181 5.1e-07 29_[+1]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGWYCYY MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGGRRTCGAACCSVKGWYCYY width=21 seqs=94 chrIII:123415-123808 ( 26) GGGACTCGAACCCGGGACCTC 1 chrIV:1016985-1017492 ( 29) GGGAGTCGAACCCCGGTCTCC 1 chrXIII:290583-291072 ( 65) GGGAGTCGAACCCCGGTCTCC 1 chrIX:370210-370651 ( 78) GGGAGTCGAACCCCGGTCTCC 1 chrVII:401368-401776 ( 15) GGGAGTCGAACCCCGGTCTCC 1 chrII:644990-645418 ( 54) GGGAGTCGAACCCCGGTCTCC 1 chrVII:541631-542159 ( 46) GGGAGTCGAACCCCGGTCTCC 1 chrXVI:210011-210488 ( 3) GGGAGTCGAACCCCGGTCTCC 1 chrVII:328368-328940 ( 20) GGGAGTCGAACCCCGGTCTCC 1 chrX:115756-115856 ( 24) GGGAGTCGAACCCCGGTCTCC 1 chrV:354715-355275 ( 30) GGGAGTCGAACCCCGGTCTCC 1 chrXI:140767-141300 ( 45) GGGAGTCGAACCCCGGTCTCC 1 chrV:551145-551543 ( 1) CGGGATCGAACCGCTGATCCC 1 chrIX:210486-210890 ( 70) CGGGATCGAACCGCTGATCCC 1 chrXII:1051910-1052334 ( 9) CGGGATCGAACCGCTGATCCC 1 chrIV:667788-668260 ( 43) CGGGATCGAACCGCTGATCCC 1 chrI:166050-166608 ( 30) CGGAATCGAACCGATGACCTC 1 chrV:135195-135717 ( 29) GGGGCTCGAACCCCTAACCTT 1 chrIV:1201524-1202023 ( 69) GGGGCTCGAACCCCTAACCTT 1 chrVII:876199-876683 ( 45) GGGGCTCGAACCCCTAACCTT 1 chrVII:185523-185960 ( 33) GGGGCTCGAACCCCTAACCTT 1 chrXVI:581886-582388 ( 17) GGGGCTCGAACCCCTAACCTT 1 chrVI:226532-226930 ( 17) GGGGCTCGAACCCCTAACCTT 1 chrVII:779399-779858 ( 79) GAGAATCGAACCCGTGTCCCC 1 chrXIV:96047-96488 ( 34) GAGAATCGAACCCGTGTCCCC 1 chrXIV:546916-547378 ( 69) GGGAATTGAACCCAGGGCCTC 1 chrIV:1075305-1075718 ( 21) GAGGATCGAACTCGGGACCTT 1 chrVIII:475540-475950 ( 21) GAGGATCGAACTCGGGACCTT 1 chrVII:828507-828990 ( 35) GGGGGTCGAACCCATAATCTT 1 chrX:355148-355248 ( 29) GGGGGTCGAACCCATAATCTT 1 chrXIII:747740-748148 ( 8) GGGGGTCGAACCCATAATCTT 1 chrVII:736162-736583 ( 59) GGGGGTCGAACCCATAATCTT 1 chrII:405650-406159 ( 65) GGGGGTCGAACCCATAATCTT 1 chrXIII:131570-132081 ( 60) GGGGGTCGAACCCATAATCTT 1 chrXI:162296-162743 ( 28) GGGGGTCGAACCCATAATCTT 1 chrV:138446-138963 ( 53) GGGGGTCGAACCCATAATCTT 1 chrVI:180711-181209 ( 74) CGGAATCGAACCGGGGGCCCA 1 chrXVI:572067-572532 ( 60) CGGAATCGAACCGGGGGCCCA 1 chrX:531624-531724 ( 22) CGGAATCGAACCGGGGGCCCA 1 chrVII:845457-845881 ( 70) CGGAATCGAACCGGGGGCCCA 1 chrXIII:183759-184136 ( 11) CGGAATCGAACCGGGGGCCCA 1 chrIV:802547-803007 ( 14) CGGATTCGAACCGGGGTTGTC 1 chrV:250118-250550 ( 43) CGGATTCGAACCGGGGTTGTC 1 chrXV:438439-438934 ( 72) GGGGCTCGAACCCCTGACATT 1 chrIII:168171-168546 ( 3) CGGATTCGAACCGGGGTTGTC 1 chrXII:875234-875637 ( 56) GGGGCTCGAACCCCTGACATT 1 chrIV:359370-359878 ( 68) GGGGCTCGAACCCCTGACATT 1 chrVII:774128-774621 ( 67) CGGAATCGAACCGGAGACCTC 1 chrV:130926-131349 ( 5) CGGATTCGAACCGGGGTTGTT 1 chrXIV:104627-105128 ( 20) CGGATTTGAACCGATGATCTC 1 chrIX:174846-175343 ( 29) CGGATTTGAACCGATGATCTC 1 chrIII:295299-295744 ( 55) CGGATTTGAACCGATGATCTC 1 chrXV:353873-354290 ( 20) CGGATTTGAACCGATGATCTC 1 chrXIV:560509-560975 ( 11) CGGATTTGAACCGATGATCTC 1 chrIX:325548-325998 ( 67) CGGATTTGAACCGATGATCTC 1 chrII:266198-266681 ( 31) CGGATTTGAACCGATGATCTC 1 chrXV:113622-114009 ( 79) CGGATTTGAACCGATGATCTC 1 chrXII:687646-688135 ( 29) CAGGATCGAACTGGGGACGTT 1 chrXI:379500-379939 ( 54) CAGGATCGAACTGGGGACGTT 1 chrX:378167-378267 ( 79) CAGGATCGAACTGGGGACGTT 1 chrXV:663586-664074 ( 42) CAGGATCGAACTGGGGACGTT 1 chrXIII:586491-586879 ( 11) CAGGATCGAACTGGGGACGTT 1 chrX:354046-354146 ( 44) GCGAGTCGAACGCCCGATCTC 1 chrVI:210462-210894 ( 1) GCGAGTCGAACGCCCGATCTC 1 chrIV:946136-946582 ( 61) GCGAGTCGAACGCCCGATCTC 1 chrVI:167264-167699 ( 64) GCGAGTCGAACGCCCGATCTC 1 chrXII:793728-794138 ( 76) GGGAATTGAACCCCGATCTGG 1 chrVII:544398-544838 ( 19) GGGAATTGAACCCCGATCTGG 1 chrXIII:463360-463919 ( 6) GGGAATTGAACCCCGATCTGG 1 chrX:374204-374304 ( 6) GGGAATTGAACCCCGATCTGG 1 chrXII:426955-427410 ( 41) GGGAATTGAACCCCGATCTGG 1 chrIX:324077-324553 ( 48) GGGAATTGAACCCCGATCTGG 1 chrX:541315-541415 ( 72) GGGAATTGAACCCCGATCTGG 1 chrIX:336186-336628 ( 2) GGGAATTGAACCCCGATCTGG 1 chrXIII:808062-808524 ( 13) CGGATTCGAACTGGGGTTGTT 1 chrX:233743-233843 ( 73) AGGACTCGAACCTGGAATCTC 1 chrXVI:622312-622820 ( 34) GTGGATCGAACACAGGACCTC 1 chrIV:1095161-1095647 ( 26) GTGGATCGAACACAGGACCTC 1 chrVII:730942-731417 ( 51) GAGGGTTGAACTCACGATCTT 1 chrXI:74442-74841 ( 76) GAGGGTTGAACTCACGATCTT 1 chrIV:1175641-1176152 ( 25) GAGGTTCGAACTCTCGACCTT 1 chrX:390905-391005 ( 3) GAGGTTCGAACTCTCGACCTT 1 chrXII:374176-374703 ( 8) AGGACTTGAACCTGGAATCTT 1 chrIV:619743-620217 ( 49) AGGACTTGAACCTGGAATCTT 1 chrXV:340112-340586 ( 10) AGGACTTGAACCTGGAATCTT 1 chrXVI:55884-56502 ( 36) AGGAATTGAACCTGCAACCCT 1 chrXIII:379133-379588 ( 3) AGGAATTGAACCTGCAACCCT 1 chrXVI:744081-744557 ( 56) CAGAATTGAACTAACGACCTT 1 chrV:207143-207599 ( 77) TAGAATCGAACCAGGGTTTCA 1 chrVII:110435-110895 ( 20) TAGAATCGAACCAGGGTTTCA 1 chrV:434399-434791 ( 6) TAGAATCGAACCAGGGTTTCA 1 chrVII:319598-320053 ( 47) TAGAATCGAACCAGGGTTTCA 1 chrVII:706957-707357 ( 11) CAGGATCGAACTAAGGACCAA 1 chrXVI:435665-436181 ( 30) CAGGATCGAACTAAGGACCAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGWYCYY MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47110 bayes= 9.39232 E= 4.5e-331 -233 92 163 -291 -59 -207 201 -391 -1320 -1320 248 -1320 94 -1320 109 -1320 41 -27 57 -101 -1320 -1320 -1320 164 -1320 203 -1320 -27 -1320 -1320 248 -1320 164 -1320 -1320 -1320 164 -1320 -1320 -1320 -1320 248 -1320 -1320 -391 211 -207 -101 -211 163 78 -233 -27 109 88 -391 -491 -62 157 9 -11 -1320 197 -1320 94 -1320 -149 -1 -1320 171 -1320 37 -333 178 -75 -39 -391 73 -107 89 -145 121 -107 26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGWYCYY MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 94 E= 4.5e-331 0.063830 0.340426 0.553191 0.042553 0.212766 0.042553 0.723404 0.021277 0.000000 0.000000 1.000000 0.000000 0.617021 0.000000 0.382979 0.000000 0.425532 0.148936 0.265957 0.159574 0.000000 0.000000 0.000000 1.000000 0.000000 0.734043 0.000000 0.265957 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.021277 0.776596 0.042553 0.159574 0.074468 0.553191 0.308511 0.063830 0.265957 0.382979 0.329787 0.021277 0.010638 0.117021 0.531915 0.340426 0.297872 0.000000 0.702128 0.000000 0.617021 0.000000 0.063830 0.319149 0.000000 0.585106 0.000000 0.414894 0.031915 0.617021 0.106383 0.244681 0.021277 0.297872 0.085106 0.595745 0.117021 0.414894 0.085106 0.382979 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGWYCYY MEME-1 regular expression -------------------------------------------------------------------------------- [GC][GA]G[AG][AG]T[CT]GAACC[CG][CGA][GT][GA][AT][CT][CT][TC][CT] -------------------------------------------------------------------------------- Time 339.11 secs. ******************************************************************************** ******************************************************************************** MOTIF SBYNYDTGGYSYAGTGGKTWRVGSSHH MEME-2 width = 27 sites = 111 llr = 1796 E-value = 1.4e-335 ******************************************************************************** -------------------------------------------------------------------------------- Motif SBYNYDTGGYSYAGTGGKTWRVGSSHH MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::1212:2:::1a2::::36541::33 pos.-specific C 43424::::653:::2:11:1215433 probability G 531324:8a:32:8:5a51:3373411 matrix T :44344a::424::a2:5631111134 bits 2.5 * * 2.2 * * 2.0 * * 1.7 * * ** * Relative 1.5 *** *** * Entropy 1.2 **** *** * (23.3 bits) 1.0 * **** *** * * 0.7 * ***** ****** *** 0.5 *** ****** ****** * *** 0.2 *** ********************* * 0.0 --------------------------- Multilevel GTCGTGTGGCCTAGTGGTTAAAGCCAT consensus CGTTCT A TGC C GATGG GGCC sequence C C A T C TA A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SBYNYDTGGYSYAGTGGKTWRVGSSHH MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrIV:410210-410565 + 43 3.32e-13 ACAAATATTG GGCGTGTGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrXVI:856724-857071 + 56 3.32e-13 ACAAGATTCG GGCGTGTGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrX:197177-197277 - 18 3.32e-13 ATAATATTAG GGCGTGTGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrVII:774128-774621 + 26 3.32e-13 CAATTAATTG GGCGTGTGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrVII:794226-794626 + 42 1.28e-11 ATAGATTGCG GGCACATGGCGCAGTTGGTAGCGCGCT TCCCTTGCAA chrXII:214761-215165 - 15 1.28e-11 CGCGTTTTAG GGCACATGGCGCAGTTGGTAGCGCGCT TCCCTTGCAA chrV:551145-551543 - 37 2.34e-11 CAGATTACAG GTCTCTTGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrIX:210486-210890 + 28 2.34e-11 GAAATATCTG GTCTCTTGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrXII:1051910-1052334 - 45 2.34e-11 CCTTTTCATG GTCTCTTGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrVII:738893-739312 + 71 2.34e-11 AAAAAAATAG GTCTCTTGGCCCAGTTGGTTAAGGCAC CGT chrIV:437529-437983 + 67 1.46e-10 CATTAGTAAG GCAACTTGGCCGAGTGGTTAAGGCGAA AGATTAG chrI:182404-182786 - 31 1.46e-10 TACAATTTTG GCAACTTGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrXIII:259011-259459 - 27 1.46e-10 AGTTAGTATG GCAACTTGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrVIII:132859-133332 - 35 1.46e-10 ATAATAAGTG GCAACTTGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrV:288278-288741 - 38 1.46e-10 ATAATGATAG GCACTATGGCCGAGTGGTTAAGGCGAC AGACTTGAAA chrIV:980839-981261 - 28 1.46e-10 GTAAATTGAG GCAACTTGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrX:523889-523989 - 35 1.46e-10 GAGATTAAAG GCAACTTGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrII:226861-227381 + 5 1.46e-10 CGAG GCAACTTGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrXII:592372-592845 - 34 3.87e-10 ACATACAATG GGAGTTTGGCCGAGTGGTTTAAGGCGT CAGATTTAGG chrXII:731875-732283 + 62 3.87e-10 ACATACAATG GGAGTTTGGCCGAGTGGTTTAAGGCGT CAGATTTAGG chrX:617722-617822 + 44 3.87e-10 ACAAACAATG GGAGTTTGGCCGAGTGGTTTAAGGCGT CAGATTTAGG chrIII:295299-295744 + 14 6.12e-10 TACAATTAAG CTTCTATGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrXV:353873-354290 - 55 6.12e-10 CGGTTTACTG CTTCTATGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrVIII:115971-116367 - 33 6.12e-10 ACTATTAGAG CTTCTATGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrXIV:560509-560975 - 46 6.12e-10 TAATAACGGG CTTCTATGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrIX:325548-325998 + 26 6.12e-10 AAAATACGAG CTTCTATGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrXV:113622-114009 + 38 6.12e-10 AGAGATTTAG CTTCTATGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrXV:274495-274936 + 9 1.10e-09 TAATCGTG TCCCAGTGGCCGAGTGGTTAAGGCGAT GCCCTGCTAT chrVI:191325-191816 - 66 1.10e-09 AGATTCTG TCCCAGTGGCCGAGTGGTTAAGGCGAT GCCCTGCTAT chrXI:308002-308415 - 32 1.92e-09 CAATTAAGTG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrVII:73706-74117 - 14 1.92e-09 CAATTAAGTG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrXII:687646-688135 - 65 1.92e-09 AAATAATAG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrXI:379500-379939 + 12 1.92e-09 AGATTAATAG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrX:378167-378267 + 37 1.92e-09 AAATTAATAG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrVIII:85204-85546 - 19 1.92e-09 TAAGAATTTG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrV:469268-469664 + 42 1.92e-09 GAAATAATTG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrXIII:586491-586879 - 47 1.92e-09 ACTTACTATG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrVII:823280-823680 + 53 1.92e-09 AATAAGAGTG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrV:438503-438911 + 44 1.92e-09 AACAAATTAG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrXIII:372312-372701 - 35 1.92e-09 ATAAAACCTG GTTTCGTGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrVII:122083-122465 + 46 3.71e-09 AACGAATTAG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrV:135195-135717 - 64 3.71e-09 AAGAAAAAAG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrIV:1201524-1202023 + 28 3.71e-09 AAATAAATAG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrIV:1352342-1352756 - 12 3.71e-09 AACGAAATAG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrVII:876199-876683 + 4 3.71e-09 TAG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrVII:185523-185960 - 68 3.71e-09 AAATAG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrVI:226532-226930 - 52 3.71e-09 GATTAAAATG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrXI:202825-203190 + 43 3.71e-09 CGTTTAAAAG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrIX:300076-300519 - 26 3.71e-09 AACGAAATAG CCTTGTTGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrI:138953-139382 + 36 8.77e-09 AATTAGTACG GGCGTGTGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrXV:300862-301379 + 28 8.77e-09 GAAAAGATCG GGCGTGTGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrVIII:388753-389208 - 38 8.77e-09 CAGATACATG GGCGTGTGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrXV:464219-464683 + 50 8.77e-09 AGTTAACAAG GGCGTGTGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrVI:101179-101609 + 33 8.77e-09 CAATAATTCG GGCGTGTGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrXIII:195922-196395 - 35 8.77e-09 AGTTCACAAG GGCGTGTGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrXV:438439-438934 + 8 1.24e-08 AACTCAT CCTTGTTAGCTCAGTTGGTAGAGCGTT CGGCTTTTAA chrIV:359370-359878 + 4 1.24e-08 CAT CCTTGTTAGCTCAGTTGGTAGAGCGTT CGGCTTTTAA chrVII:857275-857650 - 52 1.94e-08 CAAATAAGTG GTTGTTTGGCCGAGCGGTCTAAGGCGC CTGATTCAAG chrXII:628171-628670 + 14 1.94e-08 CAAATAAGTG GTTGTTTGGCCGAGCGGTCTAAGGCGC CTGATTCAAG chrVII:422914-423342 + 15 1.94e-08 CAGATAAGTG GTTGTTTGGCCGAGCGGTCTAAGGCGC CTGATTCAAG chrX:233743-233843 + 32 2.16e-08 ATATTCTTGT TCCTCGTGGCCCAATGGTCACGGCGTC TGGCTACGAA chrXV:340112-340586 - 45 2.16e-08 CAAGATCTGT TCCTCGTGGCCCAATGGTCACGGCGTC TGGCTACGAA chrXIV:374701-375079 + 30 2.97e-08 GAAAAATAAG CGGACTTAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrIV:83372-83736 + 45 4.05e-08 GTTCACTTAG CGCAAGTGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrVI:162021-162421 + 58 4.05e-08 AGAAAACAAG CGCAAGTGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrXV:281961-282381 + 44 4.05e-08 CATGAAAGCG CGCAAGTGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrXVI:860191-860573 + 48 4.05e-08 AAATAACAAG CGCAAGTGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrVII:930794-931237 - 31 4.05e-08 AATCAGTAAG CGCAAGTGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrXVI:572067-572532 + 21 4.05e-08 CAATACTTCG CGCAAGTGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrVII:845457-845881 + 31 4.05e-08 AAATAACAAG CGCAAGTGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrXIII:183759-184136 - 44 4.05e-08 ATAAAGATCG CGCAAGTGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrII:36217-36579 + 51 5.46e-08 TAGTTGTAAG CGGATTTAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrXVI:560018-560502 - 52 5.46e-08 AGAAATTGAG CGGATTTAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrVI:157755-158204 - 51 5.46e-08 TAAATAGAAG CGGATTTAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrVIII:237705-238143 - 38 5.46e-08 AAATAGTAAG CGGATTTAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrXIII:352086-352441 + 68 5.46e-08 TGAATATAAG CGGATTTAGCTCAGTTGGGAGAGCGCC AGACTG chrIII:127535-127899 + 50 6.62e-08 AGATAAAATG ACTCCATGGCCAAGTTGGTTAAGGCGT GCGACTGTTA chrXIV:102518-102935 + 41 6.62e-08 ATATTATAAG ACTCCATGGCCAAGTTGGTTAAGGCGT GCGACTGTTA chrVII:730942-731417 + 9 6.62e-08 TCAAAAAG ACTCCATGGCCAAGTTGGTTAAGGCGT GCGACTGTTA chrXI:74442-74841 + 34 6.62e-08 TAGCAATTAG ACTCCATGGCCAAGTTGGTTAAGGCGT GCGACTGTTA chrXI:84015-84406 + 49 1.06e-07 AATTTGTATG GAGGGTTGGCCGAGTGGTCTAAGGCGG CAGACTTAAG chrIV:519551-519954 + 42 1.06e-07 TGATTTTACG GAGGGTTGGCCGAGTGGTCTAAGGCGG CAGACTTAAG chrII:9373-9791 + 52 1.06e-07 AAAATTCGTG GAGGGTTGGCCGAGTGGTCTAAGGCGG CAGACTTAAG chrXIV:726019-726399 - 31 1.06e-07 TAAATCTTTG GAGGGTTGGCCGAGTGGTCTAAGGCGG CAGACTTAAG chrVII:828507-828990 - 69 1.16e-07 AGTAG CTCGCGTGGCGTAATGGCAACGCGTCT GACTTCTAAT chrXIII:747740-748148 - 42 1.16e-07 ATATGACTAG CTCGCGTGGCGTAATGGCAACGCGTCT GACTTCTAAT chrVII:736162-736583 + 19 1.16e-07 ATTTCAATAG CTCGCGTGGCGTAATGGCAACGCGTCT GACTTCTAAT chrII:405650-406159 + 25 1.16e-07 CAAATAGTAG CTCGCGTGGCGTAATGGCAACGCGTCT GACTTCTAAT chrXI:162296-162743 - 62 1.16e-07 CAAATATTAG CTCGCGTGGCGTAATGGCAACGCGTCT GACTTCTAAT chrV:138446-138963 + 13 1.16e-07 ATAAATAATG CTCGCGTGGCGTAATGGCAACGCGTCT GACTTCTAAT chrVII:779399-779858 + 39 1.38e-07 GTTAACCCCG GGCGGTTAGTGTAGTGGTTATCATCCC ACCCTTCCAA chrXV:110831-111261 - 10 1.38e-07 AATTAACCCG GGCGGTTAGTGTAGTGGTTATCATCCC ACCCTTCCA chrXIV:96047-96488 - 68 1.38e-07 CACATG GGCGGTTAGTGTAGTGGTTATCATCCC ACCCTTCCAA chrXV:976179-976685 + 40 2.30e-07 ATTTTGTGCG CTTCAGTAGCTCAGTAGGAAGAGCGTC AGTCTCATAA chrX:390905-391005 - 38 2.30e-07 AGAAATAGTG CTTCAGTAGCTCAGTAGGAAGAGCGTC AGTCTCATAA chrVII:706957-707357 - 45 2.94e-07 GAAAATCAAG CTCGTATGGCGCAGTGGTAGCGCAGCA GATTGCAAAT chrXVI:435665-436181 - 64 2.94e-07 ACAACAAAAG CTCGTATGGCGCAGTGGTAGCGCAGCA GATTGCAAAT chrXVI:775644-776019 - 28 2.94e-07 AATTCAAAAG CTCGTATGGCGCAGTGGTAGCGCAGCA GATTGCAAAT chrII:326620-327101 - 28 3.44e-07 CGAGTTCCGG GTCCAATGGTCCAGTGGTTCAAGACGT CGCCTTTACA chrIV:802547-803007 - 48 4.68e-07 TGAATTGTCG GTCCTATAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrV:250118-250550 + 3 4.68e-07 TG GTCCTATAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrIII:123415-123808 - 60 4.68e-07 TTCAAAGGAG GGCGTGTGGTCTAGAGGTATGATTCTC GCTTAGGGTG chrXIII:808062-808524 - 47 4.68e-07 GAAGAAAAAG GTCCTATAGTGTAGTGGTTATCACTTT CGGTTCTGAT chrIII:168171-168546 - 37 4.68e-07 AGAAGTCCTG GTCCTATAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrVIII:134102-134547 + 48 4.68e-07 GTAAGTTCCG GTCCTATAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrXII:448511-448941 - 18 4.68e-07 AGAAGTTCCG GTCCTATAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrIV:1256917-1257283 - 2 1.02e-06 ATCTTCTTAG CGAAAGTGGTTCAGTGGTTAGAATTCA T chrV:130926-131349 - 39 1.02e-06 TAATTAAGAG GTTTTATAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrVIII:466769-467214 + 50 1.50e-06 GTATTTTTAG CCTCCTTAGCTTAGTGGTAGAGCGTTG CACTTGTAAT chrXVI:744081-744557 + 16 1.50e-06 AGTGTAAAAG CCTCCTTAGCTTAGTGGTAGAGCGTTG CACTTGTAAT chrXII:818435-818786 + 50 3.05e-06 ATTTATTATG CTCCTCTAGTGCAATGGTTAGCATGCA TTCTTCCGGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SBYNYDTGGYSYAGTGGKTWRVGSSHH MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:410210-410565 3.3e-13 42_[+2]_31 chrXVI:856724-857071 3.3e-13 55_[+2]_18 chrX:197177-197277 3.3e-13 17_[-2]_56 chrVII:774128-774621 3.3e-13 25_[+2]_48 chrVII:794226-794626 1.3e-11 41_[+2]_32 chrXII:214761-215165 1.3e-11 14_[-2]_59 chrV:551145-551543 2.3e-11 36_[-2]_37 chrIX:210486-210890 2.3e-11 27_[+2]_46 chrXII:1051910-1052334 2.3e-11 44_[-2]_29 chrVII:738893-739312 2.3e-11 70_[+2]_3 chrIV:437529-437983 1.5e-10 66_[+2]_7 chrI:182404-182786 1.5e-10 30_[-2]_43 chrXIII:259011-259459 1.5e-10 26_[-2]_47 chrVIII:132859-133332 1.5e-10 34_[-2]_39 chrV:288278-288741 1.5e-10 37_[-2]_36 chrIV:980839-981261 1.5e-10 27_[-2]_46 chrX:523889-523989 1.5e-10 34_[-2]_39 chrII:226861-227381 1.5e-10 4_[+2]_69 chrXII:592372-592845 3.9e-10 33_[-2]_40 chrXII:731875-732283 3.9e-10 61_[+2]_12 chrX:617722-617822 3.9e-10 43_[+2]_30 chrIII:295299-295744 6.1e-10 13_[+2]_60 chrXV:353873-354290 6.1e-10 54_[-2]_19 chrVIII:115971-116367 6.1e-10 32_[-2]_41 chrXIV:560509-560975 6.1e-10 45_[-2]_28 chrIX:325548-325998 6.1e-10 25_[+2]_48 chrXV:113622-114009 6.1e-10 37_[+2]_36 chrXV:274495-274936 1.1e-09 8_[+2]_65 chrVI:191325-191816 1.1e-09 65_[-2]_8 chrXI:308002-308415 1.9e-09 31_[-2]_42 chrVII:73706-74117 1.9e-09 13_[-2]_60 chrXII:687646-688135 1.9e-09 64_[-2]_9 chrXI:379500-379939 1.9e-09 11_[+2]_62 chrX:378167-378267 1.9e-09 36_[+2]_37 chrVIII:85204-85546 1.9e-09 18_[-2]_55 chrV:469268-469664 1.9e-09 41_[+2]_32 chrXIII:586491-586879 1.9e-09 46_[-2]_27 chrVII:823280-823680 1.9e-09 52_[+2]_21 chrV:438503-438911 1.9e-09 43_[+2]_30 chrXIII:372312-372701 1.9e-09 34_[-2]_39 chrVII:122083-122465 3.7e-09 45_[+2]_28 chrV:135195-135717 3.7e-09 63_[-2]_10 chrIV:1201524-1202023 3.7e-09 27_[+2]_46 chrIV:1352342-1352756 3.7e-09 11_[-2]_62 chrVII:876199-876683 3.7e-09 3_[+2]_70 chrVII:185523-185960 3.7e-09 67_[-2]_6 chrVI:226532-226930 3.7e-09 51_[-2]_22 chrXI:202825-203190 3.7e-09 42_[+2]_31 chrIX:300076-300519 3.7e-09 25_[-2]_48 chrI:138953-139382 8.8e-09 35_[+2]_38 chrXV:300862-301379 8.8e-09 27_[+2]_46 chrVIII:388753-389208 8.8e-09 37_[-2]_36 chrXV:464219-464683 8.8e-09 49_[+2]_24 chrVI:101179-101609 8.8e-09 32_[+2]_41 chrXIII:195922-196395 8.8e-09 34_[-2]_39 chrXV:438439-438934 1.2e-08 7_[+2]_66 chrIV:359370-359878 1.2e-08 3_[+2]_70 chrVII:857275-857650 1.9e-08 51_[-2]_22 chrXII:628171-628670 1.9e-08 13_[+2]_60 chrVII:422914-423342 1.9e-08 14_[+2]_59 chrX:233743-233843 2.2e-08 31_[+2]_42 chrXV:340112-340586 2.2e-08 44_[-2]_29 chrXIV:374701-375079 3e-08 29_[+2]_44 chrIV:83372-83736 4e-08 44_[+2]_29 chrVI:162021-162421 4e-08 57_[+2]_16 chrXV:281961-282381 4e-08 43_[+2]_30 chrXVI:860191-860573 4e-08 47_[+2]_26 chrVII:930794-931237 4e-08 30_[-2]_43 chrXVI:572067-572532 4e-08 20_[+2]_53 chrVII:845457-845881 4e-08 30_[+2]_43 chrXIII:183759-184136 4e-08 43_[-2]_30 chrII:36217-36579 5.5e-08 50_[+2]_23 chrXVI:560018-560502 5.5e-08 51_[-2]_22 chrVI:157755-158204 5.5e-08 50_[-2]_23 chrVIII:237705-238143 5.5e-08 37_[-2]_36 chrXIII:352086-352441 5.5e-08 67_[+2]_6 chrIII:127535-127899 6.6e-08 49_[+2]_24 chrXIV:102518-102935 6.6e-08 40_[+2]_33 chrVII:730942-731417 6.6e-08 8_[+2]_65 chrXI:74442-74841 6.6e-08 33_[+2]_40 chrXI:84015-84406 1.1e-07 48_[+2]_25 chrIV:519551-519954 1.1e-07 41_[+2]_32 chrII:9373-9791 1.1e-07 51_[+2]_22 chrXIV:726019-726399 1.1e-07 30_[-2]_43 chrVII:828507-828990 1.2e-07 68_[-2]_5 chrXIII:747740-748148 1.2e-07 41_[-2]_32 chrVII:736162-736583 1.2e-07 18_[+2]_55 chrII:405650-406159 1.2e-07 24_[+2]_49 chrXI:162296-162743 1.2e-07 61_[-2]_12 chrV:138446-138963 1.2e-07 12_[+2]_61 chrVII:779399-779858 1.4e-07 38_[+2]_35 chrXV:110831-111261 1.4e-07 9_[-2]_64 chrXIV:96047-96488 1.4e-07 67_[-2]_6 chrXV:976179-976685 2.3e-07 39_[+2]_34 chrX:390905-391005 2.3e-07 37_[-2]_36 chrVII:706957-707357 2.9e-07 44_[-2]_29 chrXVI:435665-436181 2.9e-07 63_[-2]_10 chrXVI:775644-776019 2.9e-07 27_[-2]_46 chrII:326620-327101 3.4e-07 27_[-2]_46 chrIV:802547-803007 4.7e-07 47_[-2]_26 chrV:250118-250550 4.7e-07 2_[+2]_71 chrIII:123415-123808 4.7e-07 59_[-2]_14 chrXIII:808062-808524 4.7e-07 46_[-2]_27 chrIII:168171-168546 4.7e-07 36_[-2]_37 chrVIII:134102-134547 4.7e-07 47_[+2]_26 chrXII:448511-448941 4.7e-07 17_[-2]_56 chrIV:1256917-1257283 1e-06 1_[-2]_72 chrV:130926-131349 1e-06 38_[-2]_35 chrVIII:466769-467214 1.5e-06 49_[+2]_24 chrXVI:744081-744557 1.5e-06 15_[+2]_58 chrXII:818435-818786 3.1e-06 49_[+2]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SBYNYDTGGYSYAGTGGKTWRVGSSHH MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SBYNYDTGGYSYAGTGGKTWRVGSSHH width=27 seqs=111 chrIV:410210-410565 ( 43) GGCGTGTGGCGTAGTCGGTAGCGCGCT 1 chrXVI:856724-857071 ( 56) GGCGTGTGGCGTAGTCGGTAGCGCGCT 1 chrX:197177-197277 ( 18) GGCGTGTGGCGTAGTCGGTAGCGCGCT 1 chrVII:774128-774621 ( 26) GGCGTGTGGCGTAGTCGGTAGCGCGCT 1 chrVII:794226-794626 ( 42) GGCACATGGCGCAGTTGGTAGCGCGCT 1 chrXII:214761-215165 ( 15) GGCACATGGCGCAGTTGGTAGCGCGCT 1 chrV:551145-551543 ( 37) GTCTCTTGGCCCAGTTGGTTAAGGCAC 1 chrIX:210486-210890 ( 28) GTCTCTTGGCCCAGTTGGTTAAGGCAC 1 chrXII:1051910-1052334 ( 45) GTCTCTTGGCCCAGTTGGTTAAGGCAC 1 chrVII:738893-739312 ( 71) GTCTCTTGGCCCAGTTGGTTAAGGCAC 1 chrIV:437529-437983 ( 67) GCAACTTGGCCGAGTGGTTAAGGCGAA 1 chrI:182404-182786 ( 31) GCAACTTGGCCGAGTGGTTAAGGCGAA 1 chrXIII:259011-259459 ( 27) GCAACTTGGCCGAGTGGTTAAGGCGAA 1 chrVIII:132859-133332 ( 35) GCAACTTGGCCGAGTGGTTAAGGCGAA 1 chrV:288278-288741 ( 38) GCACTATGGCCGAGTGGTTAAGGCGAC 1 chrIV:980839-981261 ( 28) GCAACTTGGCCGAGTGGTTAAGGCGAA 1 chrX:523889-523989 ( 35) GCAACTTGGCCGAGTGGTTAAGGCGAA 1 chrII:226861-227381 ( 5) GCAACTTGGCCGAGTGGTTAAGGCGAA 1 chrXII:592372-592845 ( 34) GGAGTTTGGCCGAGTGGTTTAAGGCGT 1 chrXII:731875-732283 ( 62) GGAGTTTGGCCGAGTGGTTTAAGGCGT 1 chrX:617722-617822 ( 44) GGAGTTTGGCCGAGTGGTTTAAGGCGT 1 chrIII:295299-295744 ( 14) CTTCTATGGCCAAGTTGGTAAGGCGCC 1 chrXV:353873-354290 ( 55) CTTCTATGGCCAAGTTGGTAAGGCGCC 1 chrVIII:115971-116367 ( 33) CTTCTATGGCCAAGTTGGTAAGGCGCC 1 chrXIV:560509-560975 ( 46) CTTCTATGGCCAAGTTGGTAAGGCGCC 1 chrIX:325548-325998 ( 26) CTTCTATGGCCAAGTTGGTAAGGCGCC 1 chrXV:113622-114009 ( 38) CTTCTATGGCCAAGTTGGTAAGGCGCC 1 chrXV:274495-274936 ( 9) TCCCAGTGGCCGAGTGGTTAAGGCGAT 1 chrVI:191325-191816 ( 66) TCCCAGTGGCCGAGTGGTTAAGGCGAT 1 chrXI:308002-308415 ( 32) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrVII:73706-74117 ( 14) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrXII:687646-688135 ( 65) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrXI:379500-379939 ( 12) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrX:378167-378267 ( 37) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrVIII:85204-85546 ( 19) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrV:469268-469664 ( 42) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrXIII:586491-586879 ( 47) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrVII:823280-823680 ( 53) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrV:438503-438911 ( 44) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrXIII:372312-372701 ( 35) GTTTCGTGGTCTAGTCGGTTATGGCAT 1 chrVII:122083-122465 ( 46) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrV:135195-135717 ( 64) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrIV:1201524-1202023 ( 28) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrIV:1352342-1352756 ( 12) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrVII:876199-876683 ( 4) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrVII:185523-185960 ( 68) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrVI:226532-226930 ( 52) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrXI:202825-203190 ( 43) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrIX:300076-300519 ( 26) CCTTGTTGGCGCAATCGGTAGCGCGTA 1 chrI:138953-139382 ( 36) GGCGTGTGGTCTAGTGGTATGATTCTC 1 chrXV:300862-301379 ( 28) GGCGTGTGGTCTAGTGGTATGATTCTC 1 chrVIII:388753-389208 ( 38) GGCGTGTGGTCTAGTGGTATGATTCTC 1 chrXV:464219-464683 ( 50) GGCGTGTGGTCTAGTGGTATGATTCTC 1 chrVI:101179-101609 ( 33) GGCGTGTGGTCTAGTGGTATGATTCTC 1 chrXIII:195922-196395 ( 35) GGCGTGTGGTCTAGTGGTATGATTCTC 1 chrXV:438439-438934 ( 8) CCTTGTTAGCTCAGTTGGTAGAGCGTT 1 chrIV:359370-359878 ( 4) CCTTGTTAGCTCAGTTGGTAGAGCGTT 1 chrVII:857275-857650 ( 52) GTTGTTTGGCCGAGCGGTCTAAGGCGC 1 chrXII:628171-628670 ( 14) GTTGTTTGGCCGAGCGGTCTAAGGCGC 1 chrVII:422914-423342 ( 15) GTTGTTTGGCCGAGCGGTCTAAGGCGC 1 chrX:233743-233843 ( 32) TCCTCGTGGCCCAATGGTCACGGCGTC 1 chrXV:340112-340586 ( 45) TCCTCGTGGCCCAATGGTCACGGCGTC 1 chrXIV:374701-375079 ( 30) CGGACTTAGCTCAGTTGGGAGAGCGCC 1 chrIV:83372-83736 ( 45) CGCAAGTGGTTTAGTGGTAAAATCCAA 1 chrVI:162021-162421 ( 58) CGCAAGTGGTTTAGTGGTAAAATCCAA 1 chrXV:281961-282381 ( 44) CGCAAGTGGTTTAGTGGTAAAATCCAA 1 chrXVI:860191-860573 ( 48) CGCAAGTGGTTTAGTGGTAAAATCCAA 1 chrVII:930794-931237 ( 31) CGCAAGTGGTTTAGTGGTAAAATCCAA 1 chrXVI:572067-572532 ( 21) CGCAAGTGGTTTAGTGGTAAAATCCAA 1 chrVII:845457-845881 ( 31) CGCAAGTGGTTTAGTGGTAAAATCCAA 1 chrXIII:183759-184136 ( 44) CGCAAGTGGTTTAGTGGTAAAATCCAA 1 chrII:36217-36579 ( 51) CGGATTTAGCTCAGTTGGGAGAGCGCC 1 chrXVI:560018-560502 ( 52) CGGATTTAGCTCAGTTGGGAGAGCGCC 1 chrVI:157755-158204 ( 51) CGGATTTAGCTCAGTTGGGAGAGCGCC 1 chrVIII:237705-238143 ( 38) CGGATTTAGCTCAGTTGGGAGAGCGCC 1 chrXIII:352086-352441 ( 68) CGGATTTAGCTCAGTTGGGAGAGCGCC 1 chrIII:127535-127899 ( 50) ACTCCATGGCCAAGTTGGTTAAGGCGT 1 chrXIV:102518-102935 ( 41) ACTCCATGGCCAAGTTGGTTAAGGCGT 1 chrVII:730942-731417 ( 9) ACTCCATGGCCAAGTTGGTTAAGGCGT 1 chrXI:74442-74841 ( 34) ACTCCATGGCCAAGTTGGTTAAGGCGT 1 chrXI:84015-84406 ( 49) GAGGGTTGGCCGAGTGGTCTAAGGCGG 1 chrIV:519551-519954 ( 42) GAGGGTTGGCCGAGTGGTCTAAGGCGG 1 chrII:9373-9791 ( 52) GAGGGTTGGCCGAGTGGTCTAAGGCGG 1 chrXIV:726019-726399 ( 31) GAGGGTTGGCCGAGTGGTCTAAGGCGG 1 chrVII:828507-828990 ( 69) CTCGCGTGGCGTAATGGCAACGCGTCT 1 chrXIII:747740-748148 ( 42) CTCGCGTGGCGTAATGGCAACGCGTCT 1 chrVII:736162-736583 ( 19) CTCGCGTGGCGTAATGGCAACGCGTCT 1 chrII:405650-406159 ( 25) CTCGCGTGGCGTAATGGCAACGCGTCT 1 chrXI:162296-162743 ( 62) CTCGCGTGGCGTAATGGCAACGCGTCT 1 chrV:138446-138963 ( 13) CTCGCGTGGCGTAATGGCAACGCGTCT 1 chrVII:779399-779858 ( 39) GGCGGTTAGTGTAGTGGTTATCATCCC 1 chrXV:110831-111261 ( 10) GGCGGTTAGTGTAGTGGTTATCATCCC 1 chrXIV:96047-96488 ( 68) GGCGGTTAGTGTAGTGGTTATCATCCC 1 chrXV:976179-976685 ( 40) CTTCAGTAGCTCAGTAGGAAGAGCGTC 1 chrX:390905-391005 ( 38) CTTCAGTAGCTCAGTAGGAAGAGCGTC 1 chrVII:706957-707357 ( 45) CTCGTATGGCGCAGTGGTAGCGCAGCA 1 chrXVI:435665-436181 ( 64) CTCGTATGGCGCAGTGGTAGCGCAGCA 1 chrXVI:775644-776019 ( 28) CTCGTATGGCGCAGTGGTAGCGCAGCA 1 chrII:326620-327101 ( 28) GTCCAATGGTCCAGTGGTTCAAGACGT 1 chrIV:802547-803007 ( 48) GTCCTATAGTGTAGTGGTTATCACTTT 1 chrV:250118-250550 ( 3) GTCCTATAGTGTAGTGGTTATCACTTT 1 chrIII:123415-123808 ( 60) GGCGTGTGGTCTAGAGGTATGATTCTC 1 chrXIII:808062-808524 ( 47) GTCCTATAGTGTAGTGGTTATCACTTT 1 chrIII:168171-168546 ( 37) GTCCTATAGTGTAGTGGTTATCACTTT 1 chrVIII:134102-134547 ( 48) GTCCTATAGTGTAGTGGTTATCACTTT 1 chrXII:448511-448941 ( 18) GTCCTATAGTGTAGTGGTTATCACTTT 1 chrIV:1256917-1257283 ( 2) CGAAAGTGGTTCAGTGGTTAGAATTCA 1 chrV:130926-131349 ( 39) GTTTTATAGTGTAGTGGTTATCACTTT 1 chrVIII:466769-467214 ( 50) CCTCCTTAGCTTAGTGGTAGAGCGTTG 1 chrXVI:744081-744557 ( 16) CCTCCTTAGCTTAGTGGTAGAGCGTTG 1 chrXII:818435-818786 ( 50) CTCCTCTAGTGCAATGGTTAGCATGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SBYNYDTGGYSYAGTGGKTWRVGSSHH MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 43576 bayes= 10.5724 E= 1.4e-335 -315 121 152 -315 -315 54 77 31 -157 130 -99 17 -57 33 73 -30 -135 97 -14 17 -57 -431 111 27 -1344 -1344 -1344 164 -63 -1344 214 -1344 -1344 -1344 248 -1344 -1344 185 -1344 13 -1344 147 81 -76 -183 73 1 43 164 -1344 -1344 -1344 -98 -1344 222 -1344 -515 -273 -1344 159 -415 27 162 -57 -1344 -1344 248 -1344 -1344 -173 133 63 -35 -114 -173 93 95 -431 -199 2 65 -86 77 -183 34 39 54 -169 -157 -86 187 -125 -315 154 89 -157 -1344 127 124 -115 -11 69 -41 -20 -30 77 -173 24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SBYNYDTGGYSYAGTGGKTWRVGSSHH MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 111 E= 1.4e-335 0.036036 0.414414 0.513514 0.036036 0.036036 0.261261 0.306306 0.396396 0.108108 0.441441 0.090090 0.360360 0.216216 0.225225 0.297297 0.261261 0.126126 0.351351 0.162162 0.360360 0.216216 0.009009 0.387387 0.387387 0.000000 0.000000 0.000000 1.000000 0.207207 0.000000 0.792793 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.648649 0.000000 0.351351 0.000000 0.495495 0.315315 0.189189 0.090090 0.297297 0.180180 0.432432 1.000000 0.000000 0.000000 0.000000 0.162162 0.000000 0.837838 0.000000 0.009009 0.027027 0.000000 0.963964 0.018018 0.216216 0.549550 0.216216 0.000000 0.000000 1.000000 0.000000 0.000000 0.054054 0.450450 0.495495 0.252252 0.081081 0.054054 0.612613 0.621622 0.009009 0.045045 0.324324 0.504505 0.099099 0.306306 0.090090 0.405405 0.234234 0.261261 0.099099 0.108108 0.099099 0.657658 0.135135 0.036036 0.522523 0.333333 0.108108 0.000000 0.432432 0.423423 0.144144 0.297297 0.288288 0.135135 0.279279 0.261261 0.306306 0.054054 0.378378 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SBYNYDTGGYSYAGTGGKTWRVGSSHH MEME-2 regular expression -------------------------------------------------------------------------------- [GC][TGC][CT][GTCA][TC][GTA]T[GA]G[CT][CG][TC]AGT[GCT]G[TG][TA][AT][AG][AGC]G[CG][CG][ACT][TCA] -------------------------------------------------------------------------------- Time 648.45 secs. ******************************************************************************** ******************************************************************************** MOTIF RWRRTGTAYGGRTGTDDDD MEME-3 width = 19 sites = 127 llr = 1543 E-value = 7.3e-200 ******************************************************************************** -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGTDDDD MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3436:::7:::4:::4434 pos.-specific C 12::::2:4:::::2:111 probability G 41541a:3:9a6:812323 matrix T 231:9:8:6:::a173242 bits 2.5 * 2.2 * * 2.0 * ** 1.7 * ** * Relative 1.5 * ** * Entropy 1.2 ** ***** (17.5 bits) 1.0 **** ***** 0.7 ************ 0.5 ************* 0.2 * ************** * 0.0 ------------------- Multilevel GAGATGTATGGGTGTAATA consensus ATAG CGC A CTGAG sequence GTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGTDDDD MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------- chrXII:1064870-1065353 + 30 3.69e-10 GTGTGTGTGT GTGGTGTGTGGGTGTGGTG GGTGTGGTGT chrXII:11066-11509 - 28 3.69e-10 GGGTGTGGGT GTGGTGTGTGGGTGTGGTG TGTGTGGGTG chrXII:5470-5885 - 35 3.69e-10 TGGTGTGGGT GTGGTGTGTGGGTGTGGTG TATATATATG chrIII:30-530 - 51 3.69e-10 GTGTGTGGGT GTGGTGTGTGGGTGTGGTG TGGGTGTGTG chrIV:221969-222331 + 33 2.90e-09 AAATGAGATA AGGGTGTACGGGTGTGGTA ACCGTCGTGA chrVI:4674-4971 - 22 3.85e-09 GGGTGTGGGT GTGGTGTGTGGGTGTGGGT GTGGTGGGTG chrIV:52-301 - 7 3.85e-09 GGGGTAGTGT GTGGTGTGTGGGTGTGGGT GTGGTG chrXIII:5315-5762 - 51 3.85e-09 GGGTGTGGGT GTGGTGTGTGGGTGTGGGT GTATATATAT chrXIV:6468-6847 - 16 3.85e-09 GTGTGTGGGT GTGGTGTGTGGGTGTGGGT GTGGGTATAT chrVIII:562283-562620 + 63 3.85e-09 AAGTGTGGGT GTGGTGTGTGGGTGTGGGT GTGTGTGTGG chrXIV:783885-784174 + 56 6.56e-09 TAGTGTTAGG GTAGTGTGTGGGTGTGGTG TGTGTGGGTG chrXIII:650805-651143 - 53 6.56e-09 AAAAAACTGT GAAATGTACGGGTGTAAAA CAGTCTAAAA chrXII:650991-651257 - 62 2.14e-08 GCTACCATGA GAAATGTGTGGGTGTTGAG ATAATTGTTG chrXV:970914-971294 - 23 2.14e-08 GTTTTCTTCT GATGTGTGTGGGTGTGGTG GTAAGACATT chrV:6167-6554 - 35 2.14e-08 GAAGGTGAGC ATGGTGTGTGGGTGTGGGT GTGGGTGAAG chrV:214704-215084 - 25 2.14e-08 ACAGGCCGCT GCGGTGTGCGGGTGCTAAA TTAGAGAAAG chrIV:539009-539198 - 48 2.65e-08 AGGATTGAAT GAGGGGTGTGGGTGTGATA ATTCATGTAC chrXI:614096-614476 - 63 2.65e-08 CCTTCACCTT GTGGTGTGCGGGTGTTGCA GTCATTAATG chrXII:710632-710845 - 41 3.24e-08 AACGCAAAAT GAGATGCGTGGGTGTGATT CCTGCTTGTT chrIV:1525328-1525650 + 2 3.94e-08 T GGTGTGTGTGGGTGTGGTG TGGTGTGTAT chrVIII:382918-383369 + 6 8.11e-08 TTTTC ATGATGTATGGGTGTATCG GATGTTCGGA chrXVI:866474-866671 + 64 8.11e-08 TCACAGAGGT TTGGTGTATGGGTGTATTT CCGTTCGACG chrIV:1062878-1063074 + 29 8.11e-08 CTGCCATCAT GCGATGTGTGGGTGCTATT TATTTTCAAT chrXVI:404583-404824 - 49 8.11e-08 TTTTTTTAGA ATGATGCATGGGTGTGCAG CCTTTTTTAG chrII:592892-593280 + 47 9.60e-08 ATGGAGTTCA AAGATGTATGGATGCAAGA AAAGAGGTTA chrXIII:145887-146281 - 46 1.13e-07 TGTATGGTGT ATGGTGTATGGATGTACAA AAATGCTGTC chrII:181330-181625 - 64 1.13e-07 TGTATTCAAT GTAATGTATGGGTGCTTTG TAAAGGGTGT chrVII:10191-10416 - 72 1.13e-07 TGCATGAGGT ATGATGCACGGGTGCACTG TTTAAAAAAA chrXV:1070973-1071069 + 35 1.13e-07 TGCATGAGGT ATGATGCACGGGTGCACTG TTAAAAAAAA chrII:415490-415888 + 42 1.32e-07 TCTGGATGAC AAAATGCATGGGTGTAAAA AAGGAAATGA chrVIII:556678-557205 + 54 1.32e-07 TGTGTGTGTG GGTGTGTGTGGGTGTGGGT GTGGGTGTGG chrXIII:225350-225725 - 54 1.78e-07 AATAAAAAAT AGAATGTACGGATGTAATG CACGGATGTT chrXII:932075-932511 + 14 1.78e-07 TTTTTGTGTA CAGATGTACGGATGTACGG ATGTACGGAT chrXIII:224053-224386 + 19 2.06e-07 AAATTTCAAA AAAATGTATGGATGTAAAA TTCAGTAGTG chrIX:254250-254543 + 10 2.06e-07 GCGGCAATT AGAATGTGTGGGTGCGGAA GCTCGCCGCT chrVI:95472-95811 + 43 2.06e-07 TATACGCAGT CCGGTGTGTGGGTGCATGA CTGATTGGTC chrV:305729-306192 - 71 2.37e-07 TGTGGGCTTG TAAATGTGTGGGTGTACAG TCCCGATATT chrVIII:125903-126306 - 44 2.37e-07 TGTAAAGATG TAGGTGTACGGATGCATTA ACGTCTTTCG chrV:85146-85428 - 59 2.37e-07 GGAATACATC GAGGGGTATGGGTGGATGA TATCACTGCA chrXV:960168-960548 - 34 2.37e-07 GATTCCGATG AGGGTGTATGGGTGGTTTG AAAAAAATTT chrI:81919-82269 + 64 2.72e-07 TCATCTAGCG GAGGTGCACGGATGTACCA ACAGTTTTAG chrVIII:505805-506198 + 48 2.72e-07 ATGTCTGGGT GAAATGTATGGATGCATAA TTGTCTCGAA chrX:607833-607933 - 48 2.72e-07 TGGGTTAAAA AGGATGTATGGATGGAGGG TTGGCATAAA chrVII:555316-555684 - 56 3.10e-07 CCAAACACCT TTAATGCACGGGTGTAAAA GGGATGTACT chrXVI:281559-281921 - 72 3.10e-07 GTAATCAAAG GAAGTGTAAGGGTGTAAAG AGGTAAGGAT chrXVI:794482-794803 - 59 3.10e-07 CGATAATATA AATATGTATGGGTGTTTGG AGATGTTCGG chrIV:1359367-1359792 - 63 3.10e-07 GCATGGGTGC GTAATGTACGGATGTTTAA TGTCTTTTTA chrX:75317-75417 + 44 3.53e-07 TTTTCAAATA GTGAGGTGTGGATGTATAG AGGAATTACA chrIV:125389-125578 + 43 3.53e-07 ATAATTTGGT GCGGTGTATGGGTTCAAGT TCCCAAAAAA chrVII:149114-149520 + 49 3.53e-07 TATGTATGGG TGGGTGTATGGATGCTGTA AGCACAGTCT chrXVI:378667-379000 + 30 4.01e-07 AAAAATAGTT GAAATGTATGGGTTCAATG AGAACTCGAA chrIV:229479-229813 - 54 4.01e-07 TATAATCCTT CTGATGTACGGATGTTTTG TGTAAGATAT chrIV:358101-358428 + 33 4.01e-07 TCCTTGTCAG ATAATGTATGGGTGGTGTG TACACCAAGG chrVII:726424-726759 - 42 4.53e-07 ATGGGTGTAT ATAGGGTATGGGTGTACAG TTAATTTCAG chrXI:108710-109082 - 71 4.53e-07 TGGAGCCAAC TAAATGTACGGATGTTGTA ATGTGTTTGG chrXV:678820-679190 + 53 5.11e-07 ATGGGTCCAC AATATGTACGGATGTATGG TCCCAAAAGA chrXII:262787-263150 - 43 5.75e-07 CAAATTAACA TAAATGTATGGATGTATTA TTAAATGTAC chrX:391885-391985 - 60 5.75e-07 CCCGCTCGCA GGGAGGTCTGGGTGTGGGG CGTGTGCGAC chrVII:291670-291854 - 80 7.22e-07 GT GTGGTGTGTGGGTTCTTTA ACATGTGATG chrII:44977-45336 - 60 7.22e-07 AAACATACAT AGAATGTACGGATGCATGA TTGTCTCAGC chrXVI:406202-406579 - 27 7.22e-07 TTTGGAGGTG GAAAGGTACGGATGTTAAA CTTCATAAAA chrXVI:731934-732322 - 22 7.22e-07 CCAACCATCC TAAAGGTATGGGTGTACTG ACGATGCGAT chrXIII:500901-501072 - 36 8.06e-07 TAGCCTTATG ACTATGTACGGATGTTAGG CCGTCTTCGT chrXII:241604-242008 - 47 8.06e-07 GTTTACATTT TATATGTACGGATGTAAAA AGGGAAATAT chrIV:341255-341637 + 45 8.98e-07 ACTGGGTGTT AAAATGTACGGATGGAAAA GTAGACTCGA chrII:477062-477438 - 30 8.98e-07 TCTGGGTGTA TAAATGTGTGGGTGCAACA TGAATGTACG chrIV:411281-411621 - 30 9.99e-07 CTTTGGGTGC CCGGGGTGTGGGTGTTTGA TTTGTTTCTG chrXV:92914-93388 + 9 9.99e-07 GAACGTCA CATGTGTACGGATGTAGTT GTGTCACGGT chrV:140431-140867 + 74 1.11e-06 TCGGCATTGT AAAAGGTATGGGTGCTTTG TGCGTCCA chrXVI:172828-173091 - 19 1.11e-06 AATAATTTCA GAAATGTACGGATTTAGTT GCCAGTTCCT chrVI:221733-222083 + 60 1.11e-06 TTGGGTGTTA AAAATGTACGGGTGAAAAA AGTCTTATTT chrXV:161119-161403 + 33 1.11e-06 TATAGGAATC CCGATGTATGGGTTTGGTT GCCAGAAAAG chrIV:130579-130981 + 17 1.23e-06 AGAAAGCTAT AAAATGTGCGGATGTTTGT ATATGTCAAA chrX:675827-675927 - 42 1.23e-06 GTGCTTCGTA GTGGTGTGAGGATGTTATA AAGCGCCAAA chrIV:1300943-1301331 - 18 1.23e-06 CCAAACATCC ACAGTGCACGGATGTTTGA AGGAAAATTG chrXII:922129-922555 - 49 1.36e-06 CGAGAATTGG AATATGTACGGGTGTCAAT TTCAAACGTG chrVIII:148943-149293 + 12 1.65e-06 TTATAATCCA ATGGTGCATGGGTGAAAAT GTATGGGCTA chrIV:1401239-1401603 - 58 1.65e-06 AAAAGGGTAA TATATGTGTGGGTGGAAAA TGATTGGGTG chrXV:505096-505493 - 46 1.65e-06 GATAAGGTTC ATTGTGTATGGGTTTGAAA TGAATGACGG chrXVI:76339-76714 + 65 1.65e-06 AACACATCCG TGGATGTACGGGTGAAAAT ACAGTCAAAA chrXII:796404-796881 + 40 1.65e-06 GTTATTATCC AGGAGGCACGGATGCAAAA GATAGAAGAC chrVII:788318-788751 + 43 1.65e-06 TTGGGTTTAG AGTATGCACGGATGTTGTA AGGAATATTG chrXII:522155-522446 - 49 1.65e-06 TGGAAAACCT TTTGTGTACGGATGTTTAG TTAATAATAA chrXII:781454-781846 + 54 1.82e-06 TGGGTTTATG AAAATGCACGGATGCATTT TCTCTAGATG chrXI:551350-551545 - 31 1.82e-06 TTCAATTTTC AAAATGTACGGATTTAAAA GTACAGGAAG chrXIV:330799-331112 - 41 1.82e-06 GGTTTTACTT TAGATGTAAGGATGTAAGA TCTCTGAATG chrXII:805480-805771 - 44 2.00e-06 ATCAAAATGT GAAATGTTCGGATGTTAAG CAGGCAAATA chrVIII:353374-353551 + 54 2.00e-06 CTTCTCAGTC GCAATGCTTGGGTGTACGG TGTTTGAATA chrXIII:552892-553190 - 78 2.20e-06 CTAT GAGATGTATGGGTCTCATG AATAACGGCC chrXVI:302643-302982 - 63 2.20e-06 TGGGTGTTTT AGGATGTCTGGATGTACAA GTTAGCTGTC chrXII:202762-202885 - 36 2.41e-06 CTTTTTTTGA TAAATGTACGGATTTAAAG CTGTCGAATA chrIV:1259656-1259864 + 22 2.64e-06 TTTCATCATG GAGGTGCATGGGTTTCCTT CTGGTATGAT chrXVI:188617-188930 - 63 2.64e-06 ACCATAGTAA CCGATGCATGGGTTTTAAA AGTCACGTGC chrIV:321667-321975 - 24 2.89e-06 AAAATAAAGA TTGGTGTACGGAGGTAAAG GTATGAAAAT chrIV:392470-392850 + 48 3.45e-06 CATTATCATC ACTATGCATGGGTGTCATT ATTATTAACA chrXIV:499308-499621 + 17 3.45e-06 GTAAACTCAT GTGGTGCACTGGTGTTGTT TCCAAGACTG chrVII:534740-535251 + 57 3.77e-06 ATGGGTTACA CAAATGCACGGATGCATAT ATAAAATATA chrXV:968094-968390 + 75 4.10e-06 TCAAAAGCGT GGGGTGCGTGGGCGTGCGC TGCTCGA chrIII:178309-178685 - 39 4.10e-06 GTACTTACGT GCGGTGTACGGACTTAATA AACATCTGTA chrXIII:754415-754793 + 16 4.10e-06 AACGCTATTC TGGATGTATGGGGGTATTT TATGTTTGGG chrXV:253798-254114 + 70 4.47e-06 ATTTATACGC GCGGTGTACGGATTAAAAA AGTTTTGTAC chrXVI:575109-575489 - 47 4.86e-06 CATTCCTGTT CTTGTGTGTGGGTGCTTCA GGCAAAGAAA chrXI:114806-115186 - 52 5.28e-06 ATTTATGAAC TCTGGGTATGGGTGCTAAT TTTCGTTAGA chrX:703291-703391 + 38 5.74e-06 AAATAAATAG TGGATGCATGGGTGCTTCC ACGCGTCTCT chrVII:1000333-1000577 - 49 6.22e-06 TCCAAATATG CAGGTGTTTGGGTGCTATC CTAGTGGAAG chrXI:618785-619215 + 59 6.22e-06 ACAAATCTAT TAGAGGCACGGATGGAAAT AGTATTTAAA chrII:332295-332760 - 44 6.74e-06 TTTGGGTTTA GAATTGTATGGGTGCAGCA AGGAAATATT chrVII:228536-228808 - 3 7.89e-06 CTGTTTTCCA GAAATGTTTGGGTTTATTT TT chrXVI:699946-700389 - 13 9.20e-06 GGGATTGGGT GTGATGTAAGGATTCGCGG TCCTCGAAAA chrXII:370665-370881 + 61 9.20e-06 GACTAACCGT GTGGTTCATGGGTGGGCGA AGTGCGCAAC chrXI:67769-68029 - 60 9.20e-06 AAAATTTGAT GCGGTGCACGGATTTCAGC ACGGGTTTCA chrXII:897670-898031 - 57 9.93e-06 ATGGGTTTTT TGGAGGTACAGGTGTTGTA GAATTCTGTC chrVIII:74929-75419 - 25 9.93e-06 ACGGATGTAG AAAATGTACAGGTGTGAAC TTGCAGGTAA chrXII:48682-49111 + 55 1.07e-05 AAGGGTGTCT AAGATGTACGGATCTTCAT TGGGATGGAA chrII:604134-604500 - 30 1.07e-05 GCGAATATGA AAAATGTACAGATGTGTAA ATGTACGGAT chrXVI:520177-520525 - 59 1.15e-05 TTTTCCTCCG GCGAGGCCTGGGTGGAACA CTCAGGCAGG chrXI:158213-158642 - 19 1.24e-05 ATTTATTTCC AGTGTGCACGGGTTGAAAT AAATGAATAC chrIX:248639-249000 + 7 1.54e-05 TACACC GCGAGTCGTGGGTGCATTG TAGTTTATTA chrIX:257369-257731 - 29 1.54e-05 TCACAACTTT GCGGTGTACAGATGTCGTC ACATACCGTG chrIX:99629-100034 + 27 1.76e-05 GTTTCATGAA TAAATGTACTGGTGTTACA TGGTGTACCG chrXIII:426126-426506 - 22 1.89e-05 TAAACTAAAA TCAAGGTATGGCTGTAGAA AATGATACCA chrVI:64898-65358 + 64 1.89e-05 ACTTTTTTGT ATAATTTATGGGTGTTATC TCTGAATATG chrII:165084-165395 - 64 2.16e-05 GTGCTCTAAC GCGGTGTATGGGCTAGATT CGTAATAGGG chrVIII:103893-104271 - 21 2.31e-05 AAAATAACAA AAAATGTGTGGGCTGAAAA CCGTCTTTAA chrVII:919953-920210 - 55 2.80e-05 AGTTTTTTTC TTTATGTCTGGGTTTTTTA ATATGTTTGG chrXIII:551360-551799 - 70 2.80e-05 TATGGGTGCC AATATGTACTGATGTTTAA GTAATACGGT chrVII:609593-609698 + 35 3.38e-05 TCTGGCATCT CTAATGTTAGGATGTGAAG TTTAAGTACT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGTDDDD MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:1064870-1065353 3.7e-10 29_[+3]_52 chrXII:11066-11509 3.7e-10 27_[-3]_54 chrXII:5470-5885 3.7e-10 34_[-3]_47 chrIII:30-530 3.7e-10 50_[-3]_31 chrIV:221969-222331 2.9e-09 32_[+3]_49 chrVI:4674-4971 3.8e-09 21_[-3]_60 chrIV:52-301 3.8e-09 6_[-3]_75 chrXIII:5315-5762 3.8e-09 50_[-3]_31 chrXIV:6468-6847 3.8e-09 15_[-3]_66 chrVIII:562283-562620 3.8e-09 62_[+3]_19 chrXIV:783885-784174 6.6e-09 55_[+3]_26 chrXIII:650805-651143 6.6e-09 52_[-3]_29 chrXII:650991-651257 2.1e-08 61_[-3]_20 chrXV:970914-971294 2.1e-08 22_[-3]_59 chrV:6167-6554 2.1e-08 34_[-3]_47 chrV:214704-215084 2.1e-08 24_[-3]_57 chrIV:539009-539198 2.7e-08 47_[-3]_34 chrXI:614096-614476 2.7e-08 62_[-3]_19 chrXII:710632-710845 3.2e-08 40_[-3]_41 chrIV:1525328-1525650 3.9e-08 1_[+3]_80 chrVIII:382918-383369 8.1e-08 5_[+3]_76 chrXVI:866474-866671 8.1e-08 63_[+3]_18 chrIV:1062878-1063074 8.1e-08 28_[+3]_53 chrXVI:404583-404824 8.1e-08 48_[-3]_33 chrII:592892-593280 9.6e-08 46_[+3]_35 chrXIII:145887-146281 1.1e-07 45_[-3]_36 chrII:181330-181625 1.1e-07 63_[-3]_18 chrVII:10191-10416 1.1e-07 71_[-3]_10 chrXV:1070973-1071069 1.1e-07 34_[+3]_43 chrII:415490-415888 1.3e-07 41_[+3]_40 chrVIII:556678-557205 1.3e-07 53_[+3]_28 chrXIII:225350-225725 1.8e-07 53_[-3]_28 chrXII:932075-932511 1.8e-07 13_[+3]_68 chrXIII:224053-224386 2.1e-07 18_[+3]_63 chrIX:254250-254543 2.1e-07 9_[+3]_72 chrVI:95472-95811 2.1e-07 42_[+3]_39 chrV:305729-306192 2.4e-07 70_[-3]_11 chrVIII:125903-126306 2.4e-07 43_[-3]_38 chrV:85146-85428 2.4e-07 58_[-3]_23 chrXV:960168-960548 2.4e-07 33_[-3]_48 chrI:81919-82269 2.7e-07 63_[+3]_18 chrVIII:505805-506198 2.7e-07 47_[+3]_34 chrX:607833-607933 2.7e-07 47_[-3]_34 chrVII:555316-555684 3.1e-07 55_[-3]_26 chrXVI:281559-281921 3.1e-07 71_[-3]_10 chrXVI:794482-794803 3.1e-07 58_[-3]_23 chrIV:1359367-1359792 3.1e-07 62_[-3]_19 chrX:75317-75417 3.5e-07 43_[+3]_38 chrIV:125389-125578 3.5e-07 42_[+3]_39 chrVII:149114-149520 3.5e-07 48_[+3]_33 chrXVI:378667-379000 4e-07 29_[+3]_52 chrIV:229479-229813 4e-07 53_[-3]_28 chrIV:358101-358428 4e-07 32_[+3]_49 chrVII:726424-726759 4.5e-07 41_[-3]_40 chrXI:108710-109082 4.5e-07 70_[-3]_11 chrXV:678820-679190 5.1e-07 52_[+3]_29 chrXII:262787-263150 5.7e-07 42_[-3]_39 chrX:391885-391985 5.7e-07 59_[-3]_22 chrVII:291670-291854 7.2e-07 79_[-3]_2 chrII:44977-45336 7.2e-07 59_[-3]_22 chrXVI:406202-406579 7.2e-07 26_[-3]_55 chrXVI:731934-732322 7.2e-07 21_[-3]_60 chrXIII:500901-501072 8.1e-07 35_[-3]_46 chrXII:241604-242008 8.1e-07 46_[-3]_35 chrIV:341255-341637 9e-07 44_[+3]_37 chrII:477062-477438 9e-07 29_[-3]_52 chrIV:411281-411621 1e-06 29_[-3]_52 chrXV:92914-93388 1e-06 8_[+3]_73 chrV:140431-140867 1.1e-06 73_[+3]_8 chrXVI:172828-173091 1.1e-06 18_[-3]_63 chrVI:221733-222083 1.1e-06 59_[+3]_22 chrXV:161119-161403 1.1e-06 32_[+3]_49 chrIV:130579-130981 1.2e-06 16_[+3]_65 chrX:675827-675927 1.2e-06 41_[-3]_40 chrIV:1300943-1301331 1.2e-06 17_[-3]_64 chrXII:922129-922555 1.4e-06 48_[-3]_33 chrVIII:148943-149293 1.7e-06 11_[+3]_70 chrIV:1401239-1401603 1.7e-06 57_[-3]_24 chrXV:505096-505493 1.7e-06 45_[-3]_36 chrXVI:76339-76714 1.7e-06 64_[+3]_17 chrXII:796404-796881 1.7e-06 39_[+3]_42 chrVII:788318-788751 1.7e-06 42_[+3]_39 chrXII:522155-522446 1.7e-06 48_[-3]_33 chrXII:781454-781846 1.8e-06 53_[+3]_28 chrXI:551350-551545 1.8e-06 30_[-3]_51 chrXIV:330799-331112 1.8e-06 40_[-3]_41 chrXII:805480-805771 2e-06 43_[-3]_38 chrVIII:353374-353551 2e-06 53_[+3]_28 chrXIII:552892-553190 2.2e-06 77_[-3]_4 chrXVI:302643-302982 2.2e-06 62_[-3]_19 chrXII:202762-202885 2.4e-06 35_[-3]_46 chrIV:1259656-1259864 2.6e-06 21_[+3]_60 chrXVI:188617-188930 2.6e-06 62_[-3]_19 chrIV:321667-321975 2.9e-06 23_[-3]_58 chrIV:392470-392850 3.5e-06 47_[+3]_34 chrXIV:499308-499621 3.5e-06 16_[+3]_65 chrVII:534740-535251 3.8e-06 56_[+3]_25 chrXV:968094-968390 4.1e-06 74_[+3]_7 chrIII:178309-178685 4.1e-06 38_[-3]_43 chrXIII:754415-754793 4.1e-06 15_[+3]_66 chrXV:253798-254114 4.5e-06 69_[+3]_12 chrXVI:575109-575489 4.9e-06 46_[-3]_35 chrXI:114806-115186 5.3e-06 51_[-3]_30 chrX:703291-703391 5.7e-06 37_[+3]_44 chrVII:1000333-1000577 6.2e-06 48_[-3]_33 chrXI:618785-619215 6.2e-06 58_[+3]_23 chrII:332295-332760 6.7e-06 43_[-3]_38 chrVII:228536-228808 7.9e-06 2_[-3]_79 chrXVI:699946-700389 9.2e-06 12_[-3]_69 chrXII:370665-370881 9.2e-06 60_[+3]_21 chrXI:67769-68029 9.2e-06 59_[-3]_22 chrXII:897670-898031 9.9e-06 56_[-3]_25 chrVIII:74929-75419 9.9e-06 24_[-3]_57 chrXII:48682-49111 1.1e-05 54_[+3]_27 chrII:604134-604500 1.1e-05 29_[-3]_52 chrXVI:520177-520525 1.2e-05 58_[-3]_23 chrXI:158213-158642 1.2e-05 18_[-3]_63 chrIX:248639-249000 1.5e-05 6_[+3]_75 chrIX:257369-257731 1.5e-05 28_[-3]_53 chrIX:99629-100034 1.8e-05 26_[+3]_55 chrXIII:426126-426506 1.9e-05 21_[-3]_60 chrVI:64898-65358 1.9e-05 63_[+3]_18 chrII:165084-165395 2.2e-05 63_[-3]_18 chrVIII:103893-104271 2.3e-05 20_[-3]_61 chrVII:919953-920210 2.8e-05 54_[-3]_27 chrXIII:551360-551799 2.8e-05 69_[-3]_12 chrVII:609593-609698 3.4e-05 34_[+3]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGTDDDD MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RWRRTGTAYGGRTGTDDDD width=19 seqs=127 chrXII:1064870-1065353 ( 30) GTGGTGTGTGGGTGTGGTG 1 chrXII:11066-11509 ( 28) GTGGTGTGTGGGTGTGGTG 1 chrXII:5470-5885 ( 35) GTGGTGTGTGGGTGTGGTG 1 chrIII:30-530 ( 51) GTGGTGTGTGGGTGTGGTG 1 chrIV:221969-222331 ( 33) AGGGTGTACGGGTGTGGTA 1 chrVI:4674-4971 ( 22) GTGGTGTGTGGGTGTGGGT 1 chrIV:52-301 ( 7) GTGGTGTGTGGGTGTGGGT 1 chrXIII:5315-5762 ( 51) GTGGTGTGTGGGTGTGGGT 1 chrXIV:6468-6847 ( 16) GTGGTGTGTGGGTGTGGGT 1 chrVIII:562283-562620 ( 63) GTGGTGTGTGGGTGTGGGT 1 chrXIV:783885-784174 ( 56) GTAGTGTGTGGGTGTGGTG 1 chrXIII:650805-651143 ( 53) GAAATGTACGGGTGTAAAA 1 chrXII:650991-651257 ( 62) GAAATGTGTGGGTGTTGAG 1 chrXV:970914-971294 ( 23) GATGTGTGTGGGTGTGGTG 1 chrV:6167-6554 ( 35) ATGGTGTGTGGGTGTGGGT 1 chrV:214704-215084 ( 25) GCGGTGTGCGGGTGCTAAA 1 chrIV:539009-539198 ( 48) GAGGGGTGTGGGTGTGATA 1 chrXI:614096-614476 ( 63) GTGGTGTGCGGGTGTTGCA 1 chrXII:710632-710845 ( 41) GAGATGCGTGGGTGTGATT 1 chrIV:1525328-1525650 ( 2) GGTGTGTGTGGGTGTGGTG 1 chrVIII:382918-383369 ( 6) ATGATGTATGGGTGTATCG 1 chrXVI:866474-866671 ( 64) TTGGTGTATGGGTGTATTT 1 chrIV:1062878-1063074 ( 29) GCGATGTGTGGGTGCTATT 1 chrXVI:404583-404824 ( 49) ATGATGCATGGGTGTGCAG 1 chrII:592892-593280 ( 47) AAGATGTATGGATGCAAGA 1 chrXIII:145887-146281 ( 46) ATGGTGTATGGATGTACAA 1 chrII:181330-181625 ( 64) GTAATGTATGGGTGCTTTG 1 chrVII:10191-10416 ( 72) ATGATGCACGGGTGCACTG 1 chrXV:1070973-1071069 ( 35) ATGATGCACGGGTGCACTG 1 chrII:415490-415888 ( 42) AAAATGCATGGGTGTAAAA 1 chrVIII:556678-557205 ( 54) GGTGTGTGTGGGTGTGGGT 1 chrXIII:225350-225725 ( 54) AGAATGTACGGATGTAATG 1 chrXII:932075-932511 ( 14) CAGATGTACGGATGTACGG 1 chrXIII:224053-224386 ( 19) AAAATGTATGGATGTAAAA 1 chrIX:254250-254543 ( 10) AGAATGTGTGGGTGCGGAA 1 chrVI:95472-95811 ( 43) CCGGTGTGTGGGTGCATGA 1 chrV:305729-306192 ( 71) TAAATGTGTGGGTGTACAG 1 chrVIII:125903-126306 ( 44) TAGGTGTACGGATGCATTA 1 chrV:85146-85428 ( 59) GAGGGGTATGGGTGGATGA 1 chrXV:960168-960548 ( 34) AGGGTGTATGGGTGGTTTG 1 chrI:81919-82269 ( 64) GAGGTGCACGGATGTACCA 1 chrVIII:505805-506198 ( 48) GAAATGTATGGATGCATAA 1 chrX:607833-607933 ( 48) AGGATGTATGGATGGAGGG 1 chrVII:555316-555684 ( 56) TTAATGCACGGGTGTAAAA 1 chrXVI:281559-281921 ( 72) GAAGTGTAAGGGTGTAAAG 1 chrXVI:794482-794803 ( 59) AATATGTATGGGTGTTTGG 1 chrIV:1359367-1359792 ( 63) GTAATGTACGGATGTTTAA 1 chrX:75317-75417 ( 44) GTGAGGTGTGGATGTATAG 1 chrIV:125389-125578 ( 43) GCGGTGTATGGGTTCAAGT 1 chrVII:149114-149520 ( 49) TGGGTGTATGGATGCTGTA 1 chrXVI:378667-379000 ( 30) GAAATGTATGGGTTCAATG 1 chrIV:229479-229813 ( 54) CTGATGTACGGATGTTTTG 1 chrIV:358101-358428 ( 33) ATAATGTATGGGTGGTGTG 1 chrVII:726424-726759 ( 42) ATAGGGTATGGGTGTACAG 1 chrXI:108710-109082 ( 71) TAAATGTACGGATGTTGTA 1 chrXV:678820-679190 ( 53) AATATGTACGGATGTATGG 1 chrXII:262787-263150 ( 43) TAAATGTATGGATGTATTA 1 chrX:391885-391985 ( 60) GGGAGGTCTGGGTGTGGGG 1 chrVII:291670-291854 ( 80) GTGGTGTGTGGGTTCTTTA 1 chrII:44977-45336 ( 60) AGAATGTACGGATGCATGA 1 chrXVI:406202-406579 ( 27) GAAAGGTACGGATGTTAAA 1 chrXVI:731934-732322 ( 22) TAAAGGTATGGGTGTACTG 1 chrXIII:500901-501072 ( 36) ACTATGTACGGATGTTAGG 1 chrXII:241604-242008 ( 47) TATATGTACGGATGTAAAA 1 chrIV:341255-341637 ( 45) AAAATGTACGGATGGAAAA 1 chrII:477062-477438 ( 30) TAAATGTGTGGGTGCAACA 1 chrIV:411281-411621 ( 30) CCGGGGTGTGGGTGTTTGA 1 chrXV:92914-93388 ( 9) CATGTGTACGGATGTAGTT 1 chrV:140431-140867 ( 74) AAAAGGTATGGGTGCTTTG 1 chrXVI:172828-173091 ( 19) GAAATGTACGGATTTAGTT 1 chrVI:221733-222083 ( 60) AAAATGTACGGGTGAAAAA 1 chrXV:161119-161403 ( 33) CCGATGTATGGGTTTGGTT 1 chrIV:130579-130981 ( 17) AAAATGTGCGGATGTTTGT 1 chrX:675827-675927 ( 42) GTGGTGTGAGGATGTTATA 1 chrIV:1300943-1301331 ( 18) ACAGTGCACGGATGTTTGA 1 chrXII:922129-922555 ( 49) AATATGTACGGGTGTCAAT 1 chrVIII:148943-149293 ( 12) ATGGTGCATGGGTGAAAAT 1 chrIV:1401239-1401603 ( 58) TATATGTGTGGGTGGAAAA 1 chrXV:505096-505493 ( 46) ATTGTGTATGGGTTTGAAA 1 chrXVI:76339-76714 ( 65) TGGATGTACGGGTGAAAAT 1 chrXII:796404-796881 ( 40) AGGAGGCACGGATGCAAAA 1 chrVII:788318-788751 ( 43) AGTATGCACGGATGTTGTA 1 chrXII:522155-522446 ( 49) TTTGTGTACGGATGTTTAG 1 chrXII:781454-781846 ( 54) AAAATGCACGGATGCATTT 1 chrXI:551350-551545 ( 31) AAAATGTACGGATTTAAAA 1 chrXIV:330799-331112 ( 41) TAGATGTAAGGATGTAAGA 1 chrXII:805480-805771 ( 44) GAAATGTTCGGATGTTAAG 1 chrVIII:353374-353551 ( 54) GCAATGCTTGGGTGTACGG 1 chrXIII:552892-553190 ( 78) GAGATGTATGGGTCTCATG 1 chrXVI:302643-302982 ( 63) AGGATGTCTGGATGTACAA 1 chrXII:202762-202885 ( 36) TAAATGTACGGATTTAAAG 1 chrIV:1259656-1259864 ( 22) GAGGTGCATGGGTTTCCTT 1 chrXVI:188617-188930 ( 63) CCGATGCATGGGTTTTAAA 1 chrIV:321667-321975 ( 24) TTGGTGTACGGAGGTAAAG 1 chrIV:392470-392850 ( 48) ACTATGCATGGGTGTCATT 1 chrXIV:499308-499621 ( 17) GTGGTGCACTGGTGTTGTT 1 chrVII:534740-535251 ( 57) CAAATGCACGGATGCATAT 1 chrXV:968094-968390 ( 75) GGGGTGCGTGGGCGTGCGC 1 chrIII:178309-178685 ( 39) GCGGTGTACGGACTTAATA 1 chrXIII:754415-754793 ( 16) TGGATGTATGGGGGTATTT 1 chrXV:253798-254114 ( 70) GCGGTGTACGGATTAAAAA 1 chrXVI:575109-575489 ( 47) CTTGTGTGTGGGTGCTTCA 1 chrXI:114806-115186 ( 52) TCTGGGTATGGGTGCTAAT 1 chrX:703291-703391 ( 38) TGGATGCATGGGTGCTTCC 1 chrVII:1000333-1000577 ( 49) CAGGTGTTTGGGTGCTATC 1 chrXI:618785-619215 ( 59) TAGAGGCACGGATGGAAAT 1 chrII:332295-332760 ( 44) GAATTGTATGGGTGCAGCA 1 chrVII:228536-228808 ( 3) GAAATGTTTGGGTTTATTT 1 chrXVI:699946-700389 ( 13) GTGATGTAAGGATTCGCGG 1 chrXII:370665-370881 ( 61) GTGGTTCATGGGTGGGCGA 1 chrXI:67769-68029 ( 60) GCGGTGCACGGATTTCAGC 1 chrXII:897670-898031 ( 57) TGGAGGTACAGGTGTTGTA 1 chrVIII:74929-75419 ( 25) AAAATGTACAGGTGTGAAC 1 chrXII:48682-49111 ( 55) AAGATGTACGGATCTTCAT 1 chrII:604134-604500 ( 30) AAAATGTACAGATGTGTAA 1 chrXVI:520177-520525 ( 59) GCGAGGCCTGGGTGGAACA 1 chrXI:158213-158642 ( 19) AGTGTGCACGGGTTGAAAT 1 chrIX:248639-249000 ( 7) GCGAGTCGTGGGTGCATTG 1 chrIX:257369-257731 ( 29) GCGGTGTACAGATGTCGTC 1 chrIX:99629-100034 ( 27) TAAATGTACTGGTGTTACA 1 chrXIII:426126-426506 ( 22) TCAAGGTATGGCTGTAGAA 1 chrVI:64898-65358 ( 64) ATAATTTATGGGTGTTATC 1 chrII:165084-165395 ( 64) GCGGTGTATGGGCTAGATT 1 chrVIII:103893-104271 ( 21) AAAATGTGTGGGCTGAAAA 1 chrVII:919953-920210 ( 55) TTTATGTCTGGGTTTTTTA 1 chrXIII:551360-551799 ( 70) AATATGTACTGATGTTTAA 1 chrVII:609593-609698 ( 35) CTAATGTTAGGATGTGAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGTDDDD MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 19 n= 48288 bayes= 9.29781 E= 7.3e-200 1 -105 116 -76 30 -19 -26 -10 8 -1363 151 -110 88 -1363 116 -534 -1363 -1363 -51 145 -1363 -1363 244 -376 -1363 19 -1363 131 104 -251 58 -303 -303 111 -1363 84 -335 -1363 240 -376 -1363 -1363 248 -1363 21 -451 179 -1363 -1363 -251 -351 157 -1363 -351 222 -110 -303 25 -105 104 48 -192 35 -22 24 -51 49 -39 11 -134 25 21 32 -170 78 -44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGTDDDD MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 19 nsites= 127 E= 7.3e-200 0.322835 0.086614 0.401575 0.188976 0.393701 0.157480 0.149606 0.299213 0.338583 0.000000 0.511811 0.149606 0.590551 0.000000 0.401575 0.007874 0.000000 0.000000 0.125984 0.874016 0.000000 0.000000 0.976378 0.023622 0.000000 0.204724 0.000000 0.795276 0.661417 0.031496 0.267717 0.039370 0.039370 0.385827 0.000000 0.574803 0.031496 0.000000 0.944882 0.023622 0.000000 0.000000 1.000000 0.000000 0.370079 0.007874 0.622047 0.000000 0.000000 0.031496 0.015748 0.952756 0.000000 0.015748 0.834646 0.149606 0.039370 0.212598 0.086614 0.661417 0.448819 0.047244 0.228346 0.275591 0.377953 0.125984 0.251969 0.244094 0.346457 0.070866 0.212598 0.370079 0.401575 0.055118 0.307087 0.236220 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGTDDDD MEME-3 regular expression -------------------------------------------------------------------------------- [GA][AT][GA][AG]TG[TC][AG][TC]GG[GA]TG[TC][ATG][AGT][TAG][AGT] -------------------------------------------------------------------------------- Time 937.96 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:477062-477438 3.28e-03 10_[-3(1.07e-05)]_[-3(8.98e-07)]_52 chrIX:336186-336628 4.96e-07 1_[+1(2.24e-08)]_13_[-2(1.49e-05)]_\ 38 chrVII:533785-534165 8.14e-01 100 chrXIII:372312-372701 7.27e-06 34_[-2(1.92e-09)]_39 chrVIII:411206-411515 4.61e-01 100 chrXIII:551360-551799 6.48e-02 11_[+3(2.46e-05)]_39_[-3(2.80e-05)]_\ 12 chrII:326620-327101 2.05e-05 27_[-2(3.44e-07)]_46 chrX:349240-349340 9.09e-01 100 chrXV:409655-410035 9.38e-01 100 chrXI:140767-141300 1.73e-07 44_[+1(1.25e-11)]_35 chrXVI:775644-776019 1.21e-03 27_[-2(2.94e-07)]_46 chrXVI:404583-404824 7.21e-04 48_[-3(8.11e-08)]_33 chrVIII:562283-562620 4.46e-05 62_[+3(3.85e-09)]_19 chrIV:221969-222331 3.55e-06 8_[+3(3.18e-05)]_5_[+3(2.90e-09)]_\ 49 chrIX:79606-79986 4.87e-01 100 chrI:166050-166608 8.84e-07 29_[-1(6.67e-11)]_50 chrVIII:353374-353551 1.92e-03 53_[+3(2.00e-06)]_28 chrIV:359370-359878 8.67e-12 3_[+2(1.24e-08)]_37_[-1(1.70e-09)]_\ 12 chrVII:482695-483000 9.99e-01 100 chrV:354715-355275 2.17e-09 29_[-1(1.25e-11)]_31_[+3(2.63e-05)] chrXVI:405145-405477 5.52e-01 100 chrXVI:302643-302982 5.79e-03 62_[-3(2.20e-06)]_19 chrIV:1359367-1359792 1.96e-03 62_[-3(3.10e-07)]_19 chrIII:30583-30811 2.46e-01 100 chrXII:811018-811398 4.28e-01 100 chrV:438503-438911 3.97e-06 43_[+2(1.92e-09)]_30 chrXV:623215-623595 9.59e-01 100 chrIII:177221-177503 3.98e-01 100 chrXI:74442-74841 9.29e-09 33_[+2(6.62e-08)]_15_[-1(5.19e-08)]_\ 4 chrIV:830278-830658 9.50e-01 100 chrV:214704-215084 1.02e-04 24_[-3(2.14e-08)]_57 chrXIII:183759-184136 2.42e-10 10_[+1(7.05e-10)]_12_[-2(4.05e-08)]_\ 30 chrXIII:632777-633157 1.41e-01 100 chrVIII:556678-557205 5.99e-04 2_[+3(1.23e-06)]_8_[+3(3.10e-07)]_5_\ [+3(1.32e-07)]_28 chrV:138446-138963 1.65e-10 12_[+2(1.16e-07)]_13_[-1(6.19e-10)]_\ 27 chrIV:117857-118237 6.00e-01 100 chrXIV:96047-96488 3.71e-11 33_[+1(1.46e-10)]_13_[-2(1.38e-07)]_\ 6 chrXIII:752976-753356 7.87e-01 100 chrXIII:195922-196395 1.84e-05 34_[-2(8.77e-09)]_39 chrXII:638481-638758 2.94e-01 100 chrXIV:330799-331112 2.61e-03 40_[-3(1.82e-06)]_41 chrXIII:552892-553190 1.03e-03 77_[-3(2.20e-06)]_4 chrXV:340112-340586 7.83e-09 9_[+1(1.45e-07)]_14_[-2(2.16e-08)]_\ 29 chrXV:113622-114009 2.00e-11 37_[+2(6.12e-10)]_14_[-1(4.71e-09)]_\ 1 chrIV:356584-356964 2.82e-01 100 chrXVI:795769-795930 6.12e-01 100 chrV:301579-301959 7.23e-01 100 chrXV:161725-162105 5.96e-02 100 chrIX:300076-300519 1.77e-05 25_[-2(3.71e-09)]_48 chrXV:1004932-1005312 5.71e-01 100 chrXV:573-1026 3.08e-01 100 chrVII:845457-845881 2.24e-10 30_[+2(4.05e-08)]_12_[-1(7.05e-10)]_\ 10 chrII:60080-60460 8.85e-01 100 chrII:6543-6718 7.61e-01 100 chrV:130926-131349 3.07e-09 4_[+1(3.39e-09)]_13_[-2(1.02e-06)]_\ 35 chrVII:149114-149520 2.95e-03 48_[+3(3.53e-07)]_33 chrVII:228536-228808 2.89e-02 2_[-3(7.89e-06)]_79 chrVII:774128-774621 8.36e-15 25_[+2(3.32e-13)]_14_[-1(1.91e-09)]_\ 13 chrXV:179582-179962 7.21e-01 100 chrXII:448511-448941 1.02e-03 17_[-2(4.68e-07)]_56 chrIV:1062878-1063074 4.10e-04 28_[+3(8.11e-08)]_53 chrXII:202762-202885 1.46e-02 35_[-3(2.41e-06)]_46 chrX:139353-139453 1.58e-01 100 chrVIII:361749-362044 9.45e-01 100 chrX:115756-115856 2.03e-08 23_[+1(1.25e-11)]_56 chrVII:823280-823680 3.99e-06 52_[+2(1.92e-09)]_21 chrXIV:726019-726399 5.44e-05 30_[-2(1.06e-07)]_43 chrV:269193-269573 9.99e-01 100 chrIV:1270382-1270762 5.10e-01 100 chrXIII:146744-147124 6.94e-01 100 chrXIV:229866-230073 7.64e-01 100 chrXII:875234-875637 6.37e-07 55_[-1(1.70e-09)]_24 chrXII:369300-369644 9.18e-01 100 chrIX:439108-439328 5.27e-01 100 chrXII:930885-931004 2.82e-01 100 chrVI:64898-65358 1.81e-02 63_[+3(1.89e-05)]_18 chrX:233743-233843 1.78e-09 31_[+2(2.16e-08)]_14_[-1(2.91e-08)]_\ 7 chrIX:231295-231459 7.86e-01 100 chrIV:358101-358428 2.50e-03 32_[+3(4.01e-07)]_49 chrVII:346225-346426 4.73e-01 100 chrXIII:754415-754793 9.38e-03 15_[+3(4.10e-06)]_66 chrIV:471200-471580 7.85e-01 100 chrIII:178309-178685 1.56e-02 38_[-3(4.10e-06)]_43 chrX:121752-121852 9.91e-01 100 chrXVI:794482-794803 1.81e-03 58_[-3(3.10e-07)]_23 chrIV:118510-118707 8.73e-01 100 chrV:267965-268345 8.29e-01 100 chrXIII:504692-505226 6.78e-02 100 chrXI:55560-55940 9.39e-01 100 chrIII:30-530 2.09e-06 1_[-3(3.69e-10)]_9_[-3(3.94e-08)]_2_\ [-3(3.69e-10)]_8_[-3(1.32e-07)]_4 chrXII:214761-215165 4.60e-08 14_[-2(1.28e-11)]_59 chrX:531624-531724 8.24e-06 21_[-1(7.05e-10)]_58 chrXIII:226747-227127 8.92e-01 100 chrXV:161119-161403 1.66e-03 32_[+3(1.11e-06)]_22_[-3(2.98e-05)]_\ 8 chrV:52452-52662 1.00e+00 100 chrV:225410-225741 7.26e-01 100 chrX:440797-440897 6.95e-01 100 chrXII:1019008-1019391 2.06e-01 100 chrXII:1040926-1041306 5.62e-01 100 chrXVI:281559-281921 4.08e-04 71_[-3(3.10e-07)]_10 chrVII:730942-731417 9.29e-09 8_[+2(6.62e-08)]_15_[-1(5.19e-08)]_\ 29 chrXI:766-1012 2.94e-01 100 chrXIII:784328-784708 7.62e-01 100 chrXI:340511-340891 5.47e-01 100 chrXII:838082-838293 1.43e-02 29_[-1(4.14e-05)]_50 chrXII:5470-5885 1.39e-06 34_[-3(3.69e-10)]_28_[-3(1.13e-07)] chrXIII:586491-586879 2.03e-10 10_[+1(1.29e-08)]_15_[-2(1.92e-09)]_\ 27 chrVIII:80358-80738 9.78e-01 100 chrXVI:173026-173269 4.71e-01 100 chrIII:305583-305963 4.69e-02 100 chrVII:25429-25565 7.40e-01 100 chrII:226861-227381 4.60e-08 4_[+2(1.46e-10)]_69 chrII:197300-197880 7.70e-01 100 chrXI:202825-203190 2.96e-06 42_[+2(3.71e-09)]_31 chrX:157454-157554 1.70e-01 100 chrX:353404-353504 6.42e-01 100 chrIV:1239787-1240167 6.44e-01 100 chrXII:932075-932511 1.13e-03 13_[+3(1.78e-07)]_22_[+3(3.53e-07)]_\ 27 chrXV:744048-744428 7.36e-01 100 chrXVI:572067-572532 2.42e-10 20_[+2(4.05e-08)]_12_[-1(7.05e-10)]_\ 20 chrVII:229830-230210 6.21e-01 100 chrXI:162296-162743 2.30e-10 27_[+1(6.19e-10)]_13_[-2(1.16e-07)]_\ 12 chrX:415840-415940 5.87e-03 2_[-2(2.41e-05)]_71 chrIV:321667-321975 1.03e-02 23_[-3(2.89e-06)]_7_[-3(1.15e-05)]_\ 32 chrX:541315-541415 4.96e-07 31_[+2(1.49e-05)]_13_[-1(2.24e-08)]_\ 8 chrXII:242352-242732 6.56e-01 100 chrVII:364018-364398 9.17e-01 100 chrXI:618785-619215 4.32e-04 28_[-3(5.13e-05)]_11_[+3(6.22e-06)]_\ 23 chrVII:1000333-1000577 5.39e-03 48_[-3(6.22e-06)]_33 chrM:61056-61409 9.39e-01 100 chrXV:960168-960548 8.22e-04 33_[-3(2.37e-07)]_48 chrVIII:452615-452831 8.92e-01 100 chrV:6167-6554 1.19e-04 34_[-3(2.14e-08)]_47 chrIV:428434-428549 3.51e-01 100 chrXII:441302-441682 9.08e-01 100 chrXVI:744081-744557 1.41e-07 15_[+2(1.50e-06)]_13_[-1(2.59e-07)]_\ 24 chrXVI:731934-732322 1.21e-03 21_[-3(7.22e-07)]_60 chrIV:323024-323288 7.21e-01 100 chrVII:311188-311566 9.18e-01 100 chrV:443132-443511 4.38e-01 100 chrXVI:718594-718897 2.30e-01 100 chrXVI:577252-577632 9.93e-01 100 chrVII:919953-920210 7.35e-02 54_[-3(2.80e-05)]_27 chrXI:426874-427254 9.65e-01 100 chrVIII:134102-134547 1.60e-04 47_[+2(4.68e-07)]_26 chrVI:221733-222083 1.42e-03 59_[+3(1.11e-06)]_22 chrX:391885-391985 1.30e-03 59_[-3(5.75e-07)]_22 chrVI:226532-226930 5.84e-13 16_[+1(1.24e-10)]_14_[-2(3.71e-09)]_\ 22 chrVII:365018-365149 6.65e-01 100 chrV:85146-85428 1.70e-04 29_[-3(6.22e-06)]_10_[-3(2.37e-07)]_\ 23 chrI:73284-73664 9.68e-01 100 chrIV:309381-309761 8.48e-01 100 chrIV:217163-217573 9.26e-02 47_[+1(9.35e-05)]_32 chrX:424367-424467 8.38e-01 100 chrXIII:131570-132081 4.95e-06 59_[+1(6.19e-10)]_20 chrII:9373-9791 6.88e-06 51_[+2(1.06e-07)]_22 chrX:156778-156878 7.55e-01 100 chrXVI:406202-406579 4.06e-04 26_[-3(7.22e-07)]_55 chrXIII:352086-352441 1.30e-04 67_[+2(5.46e-08)]_6 chrIII:315844-315997 7.17e-01 100 chrX:197177-197277 2.53e-09 17_[-2(3.32e-13)]_56 chrIV:1300943-1301331 2.07e-03 17_[-3(1.23e-06)]_64 chrXVI:188617-188930 1.08e-05 13_[+2(2.25e-05)]_22_[-3(2.64e-06)]_\ 19 chrX:139987-140087 9.21e-01 100 chrIV:45988-46134 3.53e-01 100 chrXV:92914-93388 1.81e-03 8_[+3(9.99e-07)]_73 chrIX:99629-100034 1.18e-02 26_[+3(1.76e-05)]_55 chrXVI:767139-767519 7.82e-01 100 chrXII:522155-522446 1.04e-02 23_[-3(1.76e-05)]_6_[-3(1.65e-06)]_\ 33 chrXII:1029740-1030120 2.03e-01 3_[-1(9.10e-05)]_76 chrVII:788318-788751 4.99e-03 42_[+3(1.65e-06)]_39 chrXI:309399-309779 9.06e-01 100 chrVII:422914-423342 5.17e-05 14_[+2(1.94e-08)]_59 chrIV:579814-580001 1.88e-01 100 chrXI:67769-68029 1.70e-03 59_[-3(9.20e-06)]_22 chrXVI:184949-185329 2.56e-01 100 chrXIV:499308-499621 2.51e-04 16_[+3(3.45e-06)]_65 chrXI:29-227 5.78e-04 68_[-2(1.70e-06)]_5 chrXI:614096-614476 5.78e-05 62_[-3(2.65e-08)]_19 chrVII:25505-25885 3.35e-01 100 chrIII:168171-168546 7.17e-10 2_[+1(1.70e-09)]_13_[-2(4.68e-07)]_\ 37 chrXVI:856724-857071 6.35e-10 55_[+2(3.32e-13)]_18 chrX:617722-617822 1.61e-07 43_[+2(3.87e-10)]_30 chrXII:590614-590994 6.86e-01 100 chrXII:710632-710845 2.93e-04 40_[-3(3.24e-08)]_41 chrXII:796404-796881 6.44e-04 12_[+3(2.46e-05)]_8_[+3(1.65e-06)]_\ 42 chrI:29-213 5.00e-01 100 chrX:675827-675927 3.18e-03 41_[-3(1.23e-06)]_40 chrXII:780907-781182 9.05e-01 100 chrVII:738893-739312 1.37e-07 70_[+2(2.34e-11)]_3 chrXV:624286-624471 9.77e-01 100 chrX:703291-703391 1.30e-02 8_[+3(1.07e-05)]_10_[+3(5.74e-06)]_\ 44 chrV:408839-409219 4.05e-01 100 chrII:60760-61285 1.72e-01 100 chrVII:783853-784233 9.59e-01 100 chrVII:930794-931237 1.79e-04 30_[-2(4.05e-08)]_43 chrXVI:860191-860573 1.79e-04 47_[+2(4.05e-08)]_26 chrXII:796965-797376 2.78e-01 100 chrIX:294024-294404 4.02e-01 100 chrXV:110831-111261 7.73e-04 9_[-2(1.38e-07)]_64 chrX:390905-391005 7.89e-08 2_[+1(1.10e-07)]_14_[-2(2.30e-07)]_\ 36 chrXVI:433929-434309 8.28e-01 100 chrXVI:581886-582388 1.49e-07 16_[-1(1.24e-10)]_63 chrII:504547-504706 2.98e-01 100 chrVIII:74929-75419 1.52e-02 24_[-3(9.93e-06)]_57 chrIX:27-235 7.36e-01 100 chrVI:101179-101609 3.53e-05 32_[+2(8.77e-09)]_41 chrII:165974-166354 3.03e-01 100 chrVII:545583-545963 4.75e-01 100 chrV:52165-52362 6.81e-01 100 chrXII:897670-898031 2.77e-02 56_[-3(9.93e-06)]_25 chrXV:93839-94034 7.89e-01 100 chrVI:222979-223359 9.73e-01 100 chrXI:114806-115186 8.03e-03 51_[-3(5.28e-06)]_30 chrVIII:237705-238143 4.03e-04 37_[-2(5.46e-08)]_36 chrX:76021-76121 2.00e-01 100 chrIV:1489222-1489577 6.76e-01 100 chrVIII:382450-382565 9.05e-01 100 chrIV:1354606-1354775 9.34e-01 100 chrM:6776-6950 8.76e-01 100 chrXII:11066-11509 9.53e-07 27_[-3(3.69e-10)]_11_[-3(1.73e-08)]_\ 3_[-3(6.22e-06)]_2 chrXV:464219-464683 2.33e-05 49_[+2(8.77e-09)]_24 chrXV:1004009-1004403 3.49e-02 100 chrX:139636-139736 2.24e-01 100 chrII:405650-406159 2.30e-10 24_[+2(1.16e-07)]_13_[-1(6.19e-10)]_\ 15 chrIV:492356-492543 3.40e-01 100 chrVIII:475540-475950 3.99e-08 20_[+1(5.41e-10)]_14_[-2(1.54e-05)]_\ 18 chrVII:255266-255646 8.67e-01 100 chrXIV:6468-6847 9.91e-06 15_[-3(3.85e-09)]_19_[-3(6.83e-08)]_\ 28 chrXVI:781329-781709 9.90e-01 100 chrX:607833-607933 1.47e-03 47_[-3(2.72e-07)]_34 chrXIII:5315-5762 3.11e-05 50_[-3(3.85e-09)]_[-3(3.85e-09)]_12 chrIV:341255-341637 1.33e-03 44_[+3(8.98e-07)]_37 chrVIII:388753-389208 5.77e-06 37_[-2(8.77e-09)]_36 chrII:234984-235364 4.96e-01 100 chrII:266198-266681 3.36e-05 30_[-1(4.71e-09)]_49 chrXV:87611-87715 9.42e-01 100 chrXI:218214-218594 9.97e-01 100 chrV:321968-322297 6.78e-01 100 chrXV:445829-446112 7.21e-01 100 chrVII:185523-185960 5.84e-13 32_[+1(1.24e-10)]_14_[-2(3.71e-09)]_\ 6 chrIX:325548-325998 2.00e-11 25_[+2(6.12e-10)]_14_[-1(4.71e-09)]_\ 13 chrXV:421778-422158 4.40e-01 100 chrVII:736162-736583 2.30e-10 18_[+2(1.16e-07)]_13_[-1(6.19e-10)]_\ 21 chrXV:978097-978477 6.60e-01 100 chrXV:709994-710392 4.24e-02 58_[+2(1.87e-05)]_15 chrV:300819-301199 7.06e-01 100 chrXV:446735-447019 4.83e-01 100 chrIII:992-1313 3.27e-01 100 chrIII:11063-11451 3.80e-01 100 chrXIII:888705-888934 6.74e-01 100 chrXIII:225350-225725 3.45e-04 53_[-3(1.78e-07)]_28 chrXV:1027998-1028183 9.72e-01 100 chrVI:191325-191816 1.77e-07 65_[-2(1.10e-09)]_8 chrIV:1152837-1153217 3.49e-01 100 chrIV:425627-426007 3.68e-01 100 chrVII:319598-320053 3.72e-04 46_[-1(3.91e-07)]_33 chrI:742-970 5.28e-01 100 chrIV:652708-653088 4.79e-01 100 chrI:180960-181481 9.04e-02 100 chrXV:506390-506770 8.34e-01 100 chrXV:678820-679190 4.16e-04 52_[+3(5.11e-07)]_29 chrXVI:520177-520525 1.26e-02 58_[-3(1.15e-05)]_23 chrXIII:747740-748148 2.30e-10 7_[+1(6.19e-10)]_13_[-2(1.16e-07)]_\ 32 chrVIII:125903-126306 6.50e-04 43_[-3(2.37e-07)]_38 chrXII:640039-640134 9.16e-01 95 chrX:121535-121635 5.92e-01 100 chrIV:332216-332596 5.45e-01 100 chrXVI:866474-866671 8.32e-05 63_[+3(8.11e-08)]_18 chrXV:1070973-1071069 5.21e-04 34_[+3(1.13e-07)]_43 chrXII:241604-242008 3.01e-04 46_[-3(8.06e-07)]_2_[-3(7.29e-06)]_\ 14 chrIV:52-301 2.57e-06 6_[-3(3.85e-09)]_75 chrVIII:126563-126943 5.78e-01 100 chrIV:519551-519954 2.05e-05 41_[+2(1.06e-07)]_32 chrVII:328368-328940 8.78e-08 19_[-1(1.25e-11)]_60 chrXVI:745396-745776 9.24e-01 100 chrXV:970914-971294 4.52e-05 22_[-3(2.14e-08)]_59 chrXIII:500901-501072 1.33e-03 35_[-3(8.06e-07)]_46 chrII:46400-46522 8.29e-01 100 chrVIII:463700-464080 2.51e-01 100 chrVII:609593-609698 7.39e-02 34_[+3(3.38e-05)]_47 chrIV:667788-668260 4.87e-07 42_[+1(5.50e-11)]_37 chrXII:794209-795114 2.31e-01 100 chrIV:490924-491280 7.73e-02 100 chrX:523889-523989 1.12e-06 34_[-2(1.46e-10)]_39 chrXV:780418-780805 2.13e-01 100 chrII:604134-604500 3.60e-02 29_[-3(1.07e-05)]_52 chrIII:292625-292962 2.58e-01 100 chrXV:438439-438934 8.67e-12 7_[+2(1.24e-08)]_37_[-1(1.70e-09)]_\ 8 chrXVI:435665-436181 4.21e-07 29_[+1(5.14e-07)]_13_[-2(2.94e-07)]_\ 10 chrM:59522-59795 3.37e-01 100 chrVI:95472-95811 2.92e-05 42_[+3(2.06e-07)]_39 chrII:350621-350970 6.69e-01 100 chrIX:254250-254543 2.26e-04 9_[+3(2.06e-07)]_31_[+3(4.84e-05)]_\ 22 chrXI:108710-109082 9.89e-04 70_[-3(4.53e-07)]_11 chrVIII:466769-467214 1.52e-04 49_[+2(1.50e-06)]_24 chrXIV:166954-167334 9.58e-01 100 chrII:592892-593280 9.57e-05 46_[+3(9.60e-08)]_35 chrXII:838580-838960 3.42e-01 100 chrII:415490-415888 1.12e-04 41_[+3(1.32e-07)]_40 chrV:363702-364082 3.68e-01 100 chrIV:1175641-1176152 3.40e-04 24_[-1(1.10e-07)]_55 chrIX:324077-324553 6.27e-05 47_[+1(2.24e-08)]_32 chrXV:424387-424674 4.81e-01 100 chrXIV:102518-102935 2.27e-04 40_[+2(6.62e-08)]_33 chrXIII:650805-651143 4.29e-05 52_[-3(6.56e-09)]_29 chrVI:64133-64513 1.89e-01 100 chrXVI:338742-339074 1.05e-02 33_[-2(1.87e-05)]_40 chrX:349040-349140 2.78e-01 100 chrXIII:808062-808524 9.55e-09 12_[+1(2.45e-08)]_13_[-2(4.68e-07)]_\ 27 chrIV:1152638-1153018 9.32e-01 100 chrIII:16202-16582 1.70e-01 36_[-1(9.35e-05)]_43 chrX:355148-355248 1.88e-08 28_[-1(6.19e-10)]_21_[+2(1.49e-05)]_\ 3 chrXI:617767-617928 9.77e-01 100 chrIV:1278719-1278911 2.58e-01 100 chrXII:628171-628670 5.17e-05 13_[+2(1.94e-08)]_60 chrVII:10191-10416 1.18e-05 12_[-2(7.32e-05)]_32_[-3(1.13e-07)]_\ 10 chrXIII:426126-426506 3.73e-02 21_[-3(1.89e-05)]_60 chrV:397594-397974 4.56e-01 100 chrII:44977-45336 1.58e-03 59_[-3(7.22e-07)]_1_[+3(1.89e-05)]_\ 2 chrXIV:585906-586237 9.47e-01 100 chrII:414845-415225 6.91e-01 100 chrVI:134065-134445 4.82e-01 100 chrVI:167264-167699 1.13e-07 6_[+2(3.99e-06)]_30_[-1(1.71e-08)]_\ 16 chrV:441807-442621 7.89e-01 100 chrIII:191598-191978 9.99e-01 100 chrVII:805154-805534 5.14e-01 100 chrII:613919-614299 8.21e-01 100 chrXIV:560509-560975 2.00e-11 10_[+1(4.71e-09)]_14_[-2(6.12e-10)]_\ 28 chrXIV:230516-230896 8.25e-01 100 chrIX:257369-257731 3.11e-02 [-3(4.31e-05)]_9_[-3(1.54e-05)]_53 chrII:347422-347890 2.89e-02 56_[+1(6.07e-05)]_23 chrXII:731875-732283 5.51e-07 61_[+2(3.87e-10)]_12 chrIV:619743-620217 4.77e-04 48_[+1(1.45e-07)]_31 chrXVI:304130-304272 9.95e-01 100 chrXV:882625-883005 2.50e-01 100 chrIV:980839-981261 1.12e-06 27_[-2(1.46e-10)]_46 chrIV:229479-229813 1.02e-03 29_[-3(5.75e-07)]_5_[-3(4.01e-07)]_\ 28 chrVI:83975-84162 2.97e-01 100 chrXII:592372-592845 1.57e-07 33_[-2(3.87e-10)]_40 chrVIII:381646-382026 3.33e-01 100 chrVII:534740-535251 4.46e-03 56_[+3(3.77e-06)]_25 chrIV:946136-946582 1.13e-07 3_[+2(3.99e-06)]_30_[-1(1.71e-08)]_\ 19 chrIV:339083-339463 9.44e-01 100 chrXII:637300-637680 3.15e-01 100 chrXV:274495-274936 1.77e-07 8_[+2(1.10e-09)]_65 chrXV:300862-301379 3.20e-05 27_[+2(8.77e-09)]_46 chrVII:278342-278722 5.61e-01 100 chrII:181330-181625 1.15e-03 63_[-3(1.13e-07)]_18 chrVII:700496-701260 5.42e-01 100 chrII:544576-544765 3.67e-01 100 chrVII:876199-876683 5.84e-13 3_[+2(3.71e-09)]_14_[-1(1.24e-10)]_\ 35 chrXIV:722947-723327 4.75e-01 100 chrVII:479441-479679 7.02e-01 100 chrVII:883584-883964 4.76e-01 100 chrXII:1051910-1052334 1.76e-14 8_[+1(5.50e-11)]_15_[-2(2.34e-11)]_\ 29 chrXII:369486-369866 9.75e-01 100 chrVI:210462-210894 1.13e-07 [+1(1.71e-08)]_30_[-2(3.99e-06)]_22 chrVIII:382918-383369 5.85e-05 5_[+3(8.11e-08)]_76 chrXII:953066-953446 3.00e-01 100 chrX:451103-451203 5.09e-01 100 chrI:72509-72889 1.24e-01 100 chrXI:551350-551545 3.66e-04 30_[-3(1.82e-06)]_51 chrV:288278-288741 8.63e-07 37_[-2(1.46e-10)]_36 chrXII:953274-953654 4.55e-01 100 chrV:434399-434791 3.87e-04 5_[+1(3.91e-07)]_74 chrIX:248639-249000 3.67e-02 6_[+3(1.54e-05)]_75 chrIII:127535-127899 2.45e-04 49_[+2(6.62e-08)]_24 chrVII:479646-479854 9.88e-01 100 chrXII:366041-366483 2.85e-01 100 chrVIII:115971-116367 3.20e-06 32_[-2(6.12e-10)]_41 chrVII:857275-857650 5.17e-05 51_[-2(1.94e-08)]_22 chrIV:340364-340606 9.97e-01 100 chrXV:281961-282381 2.59e-05 43_[+2(4.05e-08)]_30 chrXII:498498-498972 2.18e-01 100 chrVIII:505162-505542 9.31e-01 100 chrVI:4674-4971 3.96e-06 21_[-3(3.85e-09)]_60 chrVII:26-177 1.84e-01 100 chrXV:159424-159804 4.63e-01 100 chrVIII:132859-133332 9.54e-07 34_[-2(1.46e-10)]_39 chrIX:210486-210890 1.89e-14 27_[+2(2.34e-11)]_15_[-1(5.50e-11)]_\ 10 chrXII:650991-651257 2.16e-04 61_[-3(2.14e-08)]_20 chrVII:110435-110895 3.64e-04 19_[+1(3.91e-07)]_60 chrXIV:587921-588301 6.09e-01 100 chrV:322487-322723 1.00e+00 100 chrXII:922129-922555 3.48e-03 22_[-3(3.77e-06)]_7_[-3(1.36e-06)]_\ 33 chrIII:14524-14753 1.27e-01 100 chrIII:123415-123808 1.23e-13 25_[+1(4.36e-13)]_13_[-2(4.68e-07)]_\ 14 chrXVI:172828-173091 7.76e-04 18_[-3(1.11e-06)]_63 chrIV:1095161-1095647 3.99e-05 25_[+1(4.42e-08)]_54 chrXIV:374701-375079 7.69e-05 29_[+2(2.97e-08)]_44 chrVIII:463902-464282 6.71e-01 100 chrVI:162021-162421 1.79e-04 57_[+2(4.05e-08)]_16 chrIV:1352342-1352756 2.43e-05 11_[-2(3.71e-09)]_62 chrIV:83372-83736 1.74e-04 44_[+2(4.05e-08)]_29 chrXV:160338-160718 5.67e-01 100 chrXV:253798-254114 8.08e-03 36_[-3(1.15e-05)]_14_[+3(4.47e-06)]_\ 12 chrXII:374176-374703 4.77e-04 7_[-1(1.45e-07)]_72 chrIV:1525328-1525650 1.15e-04 1_[+3(3.94e-08)]_80 chrXV:159710-160090 4.35e-01 100 chrIX:317893-318273 9.57e-01 100 chrXVI:210011-210488 2.03e-08 2_[+1(1.25e-11)]_77 chrXIII:145887-146281 1.12e-05 45_[-3(1.13e-07)]_11_[-3(7.29e-06)]_\ 6 chrXII:426955-427410 4.96e-07 [+2(1.49e-05)]_13_[-1(2.24e-08)]_39 chrIV:130579-130981 2.54e-03 16_[+3(1.23e-06)]_65 chrX:354046-354146 7.19e-05 43_[-1(1.71e-08)]_36 chrII:395136-395289 9.73e-01 100 chrV:250118-250550 7.17e-10 2_[+2(4.68e-07)]_13_[-1(1.70e-09)]_\ 37 chrIV:410210-410565 3.75e-09 42_[+2(3.32e-13)]_31 chrXV:571729-572191 1.44e-02 48_[+2(1.49e-05)]_25 chrVII:291670-291854 4.25e-03 79_[-3(7.22e-07)]_2 chrXII:370665-370881 1.42e-03 60_[+3(9.20e-06)]_21 chrVIII:34677-35057 4.90e-01 100 chrVIII:505805-506198 8.78e-04 47_[+3(2.72e-07)]_34 chrIV:1021673-1022053 2.35e-01 100 chrVIII:103893-104271 6.36e-02 20_[-3(2.31e-05)]_61 chrV:140431-140867 4.07e-03 73_[+3(1.11e-06)]_8 chrVIII:511918-512298 6.98e-01 100 chrVII:227759-228139 8.66e-01 100 chrXV:663586-664074 1.60e-05 41_[+1(1.29e-08)]_38 chrXV:353873-354290 4.37e-12 19_[+1(4.71e-09)]_14_[-2(6.12e-10)]_\ 19 chrIV:411281-411621 1.51e-04 29_[-3(9.99e-07)]_9_[-3(6.79e-05)]_\ 24 chrV:207143-207599 3.66e-04 76_[-1(3.91e-07)]_3 chrII:88125-88476 6.80e-01 100 chrV:469268-469664 7.42e-06 41_[+2(1.92e-09)]_32 chrXIV:575297-575628 4.94e-01 100 chrX:374204-374304 4.96e-07 5_[+1(2.24e-08)]_13_[-2(1.49e-05)]_\ 34 chrV:61555-62157 4.31e-01 100 chrII:413961-414341 9.62e-01 100 chrVIII:35406-35786 5.23e-02 100 chrXV:77926-78306 6.37e-01 100 chrXII:499372-499585 8.89e-01 100 chrVII:727761-728062 9.74e-01 100 chrXVI:821636-821792 3.28e-01 100 chrIV:392470-392850 1.51e-02 47_[+3(3.45e-06)]_34 chrXII:589078-589248 5.78e-01 100 chrVIII:556112-556492 1.02e-01 100 chrXV:977896-978276 4.52e-01 100 chrXIII:259011-259459 1.12e-06 26_[-2(1.46e-10)]_47 chrVII:541631-542159 2.03e-08 45_[-1(1.25e-11)]_34 chrII:89028-89408 3.77e-01 100 chrV:145626-146006 2.78e-01 100 chrVII:534040-534420 7.92e-01 100 chrXI:326868-327248 8.22e-01 100 chrV:430990-431581 9.06e-02 100 chrIV:453568-453948 9.99e-01 100 chrVII:311950-312178 9.75e-01 100 chrXIII:887577-887957 6.93e-01 100 chrIV:456558-456938 1.53e-01 100 chrXVI:378667-379000 1.62e-04 29_[+3(4.01e-07)]_6_[+3(4.86e-06)]_\ 27 chrXVI:76339-76714 3.25e-03 64_[+3(1.65e-06)]_17 chrVIII:85204-85546 4.43e-06 18_[-2(1.92e-09)]_55 chrVII:67231-67593 9.50e-01 100 chrIV:1201524-1202023 5.84e-13 27_[+2(3.71e-09)]_14_[-1(1.24e-10)]_\ 11 chrXII:805480-805771 5.15e-03 43_[-3(2.00e-06)]_38 chrIV:1449851-1450231 2.95e-01 100 chrXI:159136-159516 8.49e-01 100 chrVII:794226-794626 5.20e-08 41_[+2(1.28e-11)]_32 chrVII:779399-779858 3.71e-11 38_[+2(1.38e-07)]_13_[-1(1.46e-10)]_\ 1 chrI:182404-182786 1.04e-06 30_[-2(1.46e-10)]_43 chrIV:1240755-1241135 9.41e-01 100 chrVII:806808-807188 8.44e-01 100 chrX:378167-378267 1.17e-10 36_[+2(1.92e-09)]_15_[-1(1.29e-08)]_\ 1 chrI:229434-229709 7.84e-01 100 chrXVI:575109-575489 2.02e-02 46_[-3(4.86e-06)]_35 chrIV:42441-42583 2.49e-01 100 chrXV:323085-323465 3.35e-01 100 chrVI:157755-158204 3.81e-04 50_[-2(5.46e-08)]_23 chrXIII:761887-762226 9.06e-01 100 chrVII:287206-287654 4.13e-03 47_[-2(2.41e-05)]_26 chrVIII:555910-556290 9.60e-01 100 chrV:270367-270696 1.48e-02 1_[-3(2.64e-06)]_20_[-3(5.75e-05)]_\ 41 chrI:142139-142519 5.99e-01 100 chrIII:295299-295744 2.00e-11 13_[+2(6.12e-10)]_14_[-1(4.71e-09)]_\ 25 chrVIII:115392-115772 8.63e-01 100 chrIX:197409-197760 1.60e-01 100 chrXI:379500-379939 1.38e-10 11_[+2(1.92e-09)]_15_[-1(1.29e-08)]_\ 26 chrXV:551941-552321 1.00e+00 100 chrXVI:377992-378372 6.18e-01 100 chrXV:505096-505493 2.62e-03 45_[-3(1.65e-06)]_6_[-3(4.47e-06)]_\ 11 chrXII:48682-49111 1.92e-02 54_[+3(1.07e-05)]_27 chrV:99940-100372 1.01e-03 27_[+2(1.87e-05)]_13_[-1(5.36e-05)]_\ 12 chrXIII:379133-379588 8.48e-07 2_[+1(1.66e-07)]_47_[-2(2.41e-05)]_\ 3 chrXIV:169646-170026 5.05e-02 9_[-2(9.85e-05)]_64 chrXIV:25162-25542 9.87e-01 100 chrXV:678076-678226 9.86e-01 100 chrIV:125389-125578 5.23e-04 42_[+3(3.53e-07)]_39 chrXVI:622312-622820 1.76e-04 33_[+1(4.42e-08)]_46 chrIV:802547-803007 7.17e-10 13_[+1(1.70e-09)]_13_[-2(4.68e-07)]_\ 26 chrX:74746-74846 9.42e-01 100 chrV:305729-306192 1.49e-03 70_[-3(2.37e-07)]_11 chrM:59686-60066 2.59e-02 69_[-2(3.78e-05)]_4 chrXII:856105-856485 3.66e-01 100 chrV:551145-551543 1.16e-14 [+1(5.50e-11)]_15_[-2(2.34e-11)]_37 chrXVI:278817-279197 9.43e-01 100 chrXIV:546916-547378 1.63e-07 68_[-1(3.09e-10)]_11 chrXI:283208-283588 8.00e-01 100 chrIV:1401239-1401603 4.78e-03 57_[-3(1.65e-06)]_24 chrXV:976179-976685 9.86e-04 39_[+2(2.30e-07)]_34 chrXVI:340491-340871 3.18e-02 30_[-3(7.17e-05)]_51 chrII:644990-645418 2.03e-08 53_[-1(1.25e-11)]_26 chrXI:326516-326638 3.01e-01 100 chrXII:687646-688135 2.08e-10 28_[+1(1.29e-08)]_15_[-2(1.92e-09)]_\ 9 chrI:92533-92913 4.64e-01 100 chrXIII:463360-463919 1.15e-04 5_[-1(2.24e-08)]_74 chrXV:250832-251212 9.94e-01 100 chrVII:545508-545647 8.46e-01 100 chrIX:174846-175343 5.25e-05 28_[-1(4.71e-09)]_51 chrIV:355526-355695 9.78e-01 100 chrXII:637087-637467 8.45e-01 100 chrIV:520752-521137 3.34e-01 100 chrVIII:80158-80538 5.34e-01 100 chrXV:867615-867995 8.82e-01 100 chrXII:818435-818786 2.79e-03 49_[+2(3.05e-06)]_24 chrIII:147881-148261 7.54e-01 100 chrI:81919-82269 9.48e-05 63_[+3(2.72e-07)]_18 chrXIII:224053-224386 6.84e-04 18_[+3(2.06e-07)]_6_[+3(1.15e-05)]_\ 38 chrVII:555316-555684 2.93e-04 55_[-3(3.10e-07)]_26 chrM:60584-60932 7.94e-01 100 chrXVI:699946-700389 6.42e-03 12_[-3(9.20e-06)]_16_[-3(4.84e-05)]_\ 34 chrVII:557695-557903 1.30e-01 100 chrVII:73706-74117 4.87e-06 13_[-2(1.92e-09)]_60 chrXV:832514-832662 9.81e-01 100 chrXVI:560018-560502 2.20e-04 51_[-2(5.46e-08)]_22 chrVII:401368-401776 2.03e-08 14_[+1(1.25e-11)]_65 chrI:138953-139382 1.37e-05 35_[+2(8.77e-09)]_38 chrXV:1004704-1005084 8.22e-01 100 chrIV:992591-993005 8.99e-01 100 chrXIII:500059-500167 5.90e-01 100 chrXI:158213-158642 4.80e-02 18_[-3(1.24e-05)]_2_[-3(5.43e-05)]_\ 42 chrVII:882506-882846 2.50e-01 100 chrIV:539009-539198 1.21e-06 47_[-3(2.65e-08)]_34 chrVII:706957-707357 4.21e-07 10_[+1(5.14e-07)]_13_[-2(2.94e-07)]_\ 29 chrI:72310-72690 6.81e-02 100 chrX:75317-75417 1.59e-03 43_[+3(3.53e-07)]_38 chrV:135195-135717 5.84e-13 28_[+1(1.24e-10)]_14_[-2(3.71e-09)]_\ 10 chrXIII:267924-268255 8.64e-01 100 chrII:332295-332760 2.36e-02 43_[-3(6.74e-06)]_38 chrIV:1075305-1075718 3.99e-08 20_[+1(5.41e-10)]_14_[-2(1.54e-05)]_\ 18 chrXI:46669-46990 6.26e-02 100 chrXV:968094-968390 6.32e-04 74_[+3(4.10e-06)]_7 chrIX:370210-370651 2.03e-08 77_[-1(1.25e-11)]_2 chrXII:964750-965130 5.53e-01 100 chrII:557555-557677 9.84e-01 100 chrXVI:201181-201561 1.08e-01 63_[-1(4.42e-05)]_16 chrII:36217-36579 5.31e-04 50_[+2(5.46e-08)]_23 chrIV:1259656-1259864 1.03e-02 21_[+3(2.64e-06)]_60 chrXIII:290583-291072 2.03e-08 64_[-1(1.25e-11)]_15 chrVII:726424-726759 2.85e-03 41_[-3(4.53e-07)]_40 chrXI:665938-666126 6.87e-01 100 chrVII:544398-544838 4.96e-07 18_[+1(2.24e-08)]_13_[-2(1.49e-05)]_\ 21 chrVII:828507-828990 2.30e-10 34_[+1(6.19e-10)]_13_[-2(1.16e-07)]_\ 5 chrXII:199285-199608 7.65e-01 100 chrXV:421977-422357 1.47e-01 100 chrXVI:55884-56502 8.73e-05 35_[+1(1.66e-07)]_44 chrXII:793728-794138 4.96e-07 35_[+2(1.49e-05)]_13_[-1(2.24e-08)]_\ 4 chrXV:900099-900479 2.65e-01 100 chrVII:481951-482135 4.71e-01 100 chrXI:84015-84406 6.17e-06 48_[+2(1.06e-07)]_25 chrX:451308-451408 6.53e-02 38_[+1(6.26e-05)]_41 chrXII:262787-263150 1.92e-03 22_[-3(3.38e-05)]_1_[-3(5.75e-07)]_\ 39 chrXIII:712081-712308 5.10e-01 100 chrVII:227559-227939 9.19e-01 100 chrII:165084-165395 1.46e-02 63_[-3(2.16e-05)]_18 chrX:535986-536086 2.49e-01 100 chrXI:26102-26482 6.10e-01 100 chrVI:180711-181209 9.17e-06 73_[+1(7.05e-10)]_6 chrVIII:400956-401336 3.82e-01 100 chrVII:826943-827323 3.72e-01 100 chrVII:878616-879013 4.13e-03 23_[-2(2.41e-05)]_50 chrXII:713078-713567 5.38e-01 100 chrXIII:91794-92071 5.83e-01 100 chrIII:162506-162727 9.36e-01 100 chrVII:483310-483690 1.47e-01 100 chrXII:781454-781846 4.81e-03 53_[+3(1.82e-06)]_28 chrXIV:104627-105128 5.25e-05 19_[-1(4.71e-09)]_60 chrVIII:386521-386901 6.36e-01 100 chrIV:1016985-1017492 1.41e-08 28_[+1(1.25e-11)]_51 chrVII:122083-122465 2.43e-05 45_[+2(3.71e-09)]_28 chrXIV:783885-784174 1.50e-05 55_[+3(6.56e-09)]_4_[+3(6.83e-08)]_\ 3 chrXV:718340-718720 8.92e-01 100 chrXI:308002-308415 4.87e-06 31_[-2(1.92e-09)]_42 chrXII:1064870-1065353 1.49e-06 29_[+3(3.69e-10)]_25_[+3(1.23e-06)]_\ 8 chrVIII:148943-149293 1.16e-03 11_[+3(1.65e-06)]_70 chrV:117937-118302 7.45e-02 9_[-2(7.09e-05)]_64 chrIV:1256917-1257283 1.68e-03 1_[-2(1.02e-06)]_72 chrIV:306732-306847 9.08e-01 100 chrIV:663-762 5.04e-01 99 chrIV:437529-437983 4.77e-07 66_[+2(1.46e-10)]_7 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************