******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXIV:495239-495558 1.0000 100 chrX:517741-517841 1.0000 100 chrXIII:550803-551143 1.0000 100 chrXVI:581907-582202 1.0000 100 chrV:110576-110782 1.0000 100 chrVII:254117-254533 1.0000 100 chrXII:366092-366443 1.0000 100 chrXV:506076-506416 1.0000 100 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chrV:362791-363131 1.0000 100 chrXIII:671448-671788 1.0000 100 chrXIV:726019-726379 1.0000 100 chrX:396645-396745 1.0000 100 chrV:131045-131338 1.0000 100 chrVIII:452661-452770 1.0000 100 chrXIV:230527-230867 1.0000 100 chrXV:216269-216628 1.0000 100 chrVII:352292-352632 1.0000 100 chrXVI:76390-76692 1.0000 100 chrV:135267-135662 1.0000 100 chrXV:259482-259822 1.0000 100 chrVIII:126510-126850 1.0000 100 chrXIII:480512-480838 1.0000 100 chrVI:226569-226900 1.0000 100 chrXII:793751-794076 1.0000 100 chrXII:1051938-1052290 1.0000 100 chrXII:710536-710876 1.0000 100 chrXV:724928-725268 1.0000 100 chrIV:1062761-1063101 1.0000 100 chrXII:952975-953315 1.0000 100 chrIV:130104-130225 1.0000 100 chrXIV:234178-234518 1.0000 100 chrV:362189-362464 1.0000 100 chrV:6197-6538 1.0000 100 chrII:557338-557678 1.0000 100 chrXIV:585915-586152 1.0000 100 chrXV:968162-968343 1.0000 100 chrVII:422932-423290 1.0000 100 chrXII:932095-932486 1.0000 100 chrXI:379533-379788 1.0000 100 chrIV:1329324-1329664 1.0000 100 chrVII:227650-227990 1.0000 100 chrXIV:250063-250403 1.0000 100 chrX:58985-59085 1.0000 100 chrV:51956-52296 1.0000 100 chrXIII:924168-924408 1.0000 100 chrIV:1301972-1302312 1.0000 100 chrIV:976460-976800 1.0000 100 chrXIII:550148-550488 1.0000 100 chrIV:1403044-1403147 1.0000 100 chrV:86449-86761 1.0000 100 chrXIV:229895-230053 1.0000 100 chrIX:174888-175266 1.0000 100 chrXI:617688-618028 1.0000 100 chrVII:319623-319985 1.0000 100 chrXV:288051-288323 1.0000 100 chrXVI:694058-694398 1.0000 100 chrVII:730968-731360 1.0000 100 chrV:469292-469581 1.0000 100 chrIV:519569-519926 1.0000 100 chrII:81980-82320 1.0000 100 chrXIII:362926-363247 1.0000 100 chrVII:807702-808042 1.0000 100 chrX:354070-354170 1.0000 100 chrVII:122124-122376 1.0000 100 chrX:702696-702796 1.0000 100 chrXII:5499-5864 1.0000 100 chrXI:326848-327188 1.0000 100 chrXIV:379211-379551 1.0000 100 chrVI:221760-222069 1.0000 100 chrVI:210573-210867 1.0000 100 chrVII:784748-785088 1.0000 100 chrXI:551374-551714 1.0000 100 chrVI:162073-162381 1.0000 100 chrXV:854036-854409 1.0000 100 chrVII:779450-779808 1.0000 100 chrVIII:150431-150771 1.0000 100 chrII:350654-350953 1.0000 100 chrXI:432638-432978 1.0000 100 chrVII:882521-882874 1.0000 100 chrV:492265-492576 1.0000 100 chrXV:606186-606526 1.0000 100 chrIV:437559-437948 1.0000 100 chrXV:353889-354269 1.0000 100 chrVII:312013-312136 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 594 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59345 N= 594 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.314 C 0.186 G 0.186 T 0.314 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--PDR1/background): A 0.320 C 0.180 G 0.180 T 0.320 ******************************************************************************** ******************************************************************************** MOTIF SSCBYWAMCCACTVVGCCAMV MEME-1 width = 21 sites = 163 llr = 2245 E-value = 7.3e-394 ******************************************************************************** -------------------------------------------------------------------------------- Motif SSCBYWAMCCACTVVGCCAMV MEME-1 Description -------------------------------------------------------------------------------- Simplified A 22112364:29:13221:a34 pos.-specific C 547432:5a6:8:33198:52 probability G 34121:1::2:::347::::3 matrix T ::14453::::291:::2:21 bits 2.5 * 2.2 * 2.0 * * 1.7 * * *** Relative 1.5 * * *** Entropy 1.2 * *** *** (19.9 bits) 1.0 * * *** **** 0.7 *** ****** ****** 0.5 *** ****** ****** 0.2 ********************* 0.0 --------------------- Multilevel CGCTTTACCCACTAGGCCACA consensus GC CCATA A GCA AG sequence CA C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCBYWAMCCACTVVGCCAMV MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIV:437559-437948 - 74 2.15e-11 ATCTTT CGCCTTAACCACTCGGCCAAG TTGCCTTACT chrV:86449-86761 - 54 2.15e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCATAAC chrXIII:259064-259408 + 28 2.15e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCATACT chrVII:561464-561915 + 79 2.15e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAAG T chrX:523894-523994 + 44 2.15e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCTTTAA chrI:182423-182762 + 36 2.15e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCAAAAT chrIV:1305466-1305769 - 68 2.15e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCTTAAT chrXII:167899-168194 + 4 2.15e-11 TTT CGCCTTAACCACTCGGCCAAG TTGCCATATG chrVIII:132916-133308 + 20 2.15e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCACTTA chrIV:1150819-1151109 + 2 7.65e-11 T CGCCTTAACCACTCGGCCACT GGGACTGAAA chrVI:191397-191794 + 43 7.65e-11 AGCAGGGCAT CGCCTTAACCACTCGGCCACT GGGACAGAAT chrIII:227778-228140 - 38 2.39e-10 TCGAGTCTCT CGCCTTAACCACTCGGCCATA GTGCCATTTC chrXI:517837-518096 - 77 2.39e-10 GAG CGCGCTACCGACTACGCCACA CGCCCATAGT chrXIII:321038-321349 + 51 2.39e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCGATTT chrXI:219734-220019 - 74 2.39e-10 AGGGAG CGCGCTACCGACTACGCCACA CGCCCTATTT chrVII:774171-774519 - 59 2.39e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCAATTA chrXVI:689390-689748 - 51 2.39e-10 TCAAGTCTGT CGCCTTAACCACTCGGCCATA GTGCCCAAAA chrIV:410254-410486 - 64 2.39e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCAATAT chrXII:656824-657158 + 40 2.39e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCAATTT chrV:288338-288680 + 40 2.39e-10 TCAAGTCTGT CGCCTTAACCACTCGGCCATA GTGCCTATCA chrVI:204857-205135 + 25 2.39e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCGAACG chrXII:731900-732256 - 67 9.74e-10 TAAATCTGAC GCCTTAAACCACTCGGCCAAA CTCCCATTGT chrX:617746-617846 - 39 9.74e-10 TAAATCTGAC GCCTTAAACCACTCGGCCAAA CTCCCATTGT chrXII:592404-592784 + 50 9.74e-10 TAAATCTGAC GCCTTAAACCACTCGGCCAAA CTCCCATTGT chrXII:1051938-1052290 + 55 1.41e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATGAA chrIX:183378-183681 + 9 1.41e-09 AGCACGGT GCCTTAACCAACTGGGCCAAG AGACCAGGAA chrXIV:602204-602407 - 62 1.41e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATTGT chrXVI:880160-880521 + 54 1.41e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATTAT chrIV:667851-668238 + 61 1.41e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCAATTT chrXIV:569834-570048 + 24 1.41e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCACTGT chrV:551194-551486 + 43 1.41e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCTGTAA chrXV:854036-854409 + 62 1.69e-09 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCTGATG chrXII:214770-215130 + 30 1.69e-09 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCTAAAA chrV:311964-312255 + 11 1.69e-09 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCAGAAT chrXV:353889-354269 + 59 8.96e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCAGTAA chrV:492265-492576 + 29 8.96e-09 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAATAGGA chrIX:174888-175266 - 9 8.96e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTCG chrX:58985-59085 + 38 8.96e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTTCTA chrXV:340153-340551 + 44 8.96e-09 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAACAGAT chrXV:113665-113967 - 41 8.96e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTAAAT chrIV:619840-620177 + 58 8.96e-09 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAACAAGA chrIII:295340-295605 - 67 8.96e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTTAAT chrVIII:116023-116342 + 22 8.96e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTCTAA chrVII:122124-122376 - 74 1.05e-08 GTCATA CGCGCTACCGATTGCGCCAAC AAGGCTAATT chrIV:519569-519926 - 51 1.05e-08 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCGTAAA chrVI:226569-226900 + 51 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCATTTT chrXIII:480512-480838 + 43 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTACTT chrV:135267-135662 + 58 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTTTTT chrXIV:726019-726379 + 43 1.05e-08 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCAAAGA chrIX:300110-300477 + 32 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTATTT chrVII:185657-185925 + 20 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTATTT chrV:435665-435986 + 24 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTCTTA chrIV:1201573-1201991 - 23 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTATTT chrX:414818-414918 - 16 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTAATT chrXI:202854-203136 - 59 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTTTTA chrIV:1352374-1352711 + 21 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTATTT chrXVI:581907-582202 - 63 1.05e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTCTTT chrV:469292-469581 - 76 2.52e-08 AGAT GCCATAACCGACTAGACCACG AAACCAATTA chrXI:379533-379788 - 75 2.52e-08 CAGAT GCCATAACCGACTAGACCACG AAACCTATTA chrXV:663631-664046 + 72 2.52e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCACT chrXI:308047-308356 + 41 2.52e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCACTTA chrV:438534-438887 - 45 2.52e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTAATT chrVII:73770-74066 + 9 2.52e-08 AAGCAGAT GCCATAACCGACTAGACCACG AAACCACTTA chrXII:687744-688132 + 19 2.52e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTATTA chrVII:823315-823615 - 72 2.52e-08 AAGCAGAT GCCATAACCGACTAGACCACG AAACCACTCT chrVII:412204-412534 + 23 2.52e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCAGTTT chrXIII:420507-420827 + 19 2.52e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTGTTA chrX:378199-378299 - 60 2.52e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTATTA chrVII:730968-731360 - 28 3.32e-08 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTTTTT chrXI:74466-74799 - 47 3.32e-08 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTAATT chrXV:228146-228496 - 65 3.32e-08 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTAATA chrXIV:632445-632742 - 61 3.32e-08 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCACTTT chrIV:884201-884494 - 69 3.32e-08 ATAAGCACGA AGCTCTAACCACTGAGCTACA CGAGCATTTT chrXII:975923-976201 + 19 3.32e-08 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTTTTA chrIV:359388-359830 - 23 4.98e-08 AAAAGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrVII:115326-115684 - 38 4.98e-08 AAAAGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrVII:422932-423290 - 36 2.17e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrVII:205362-205707 - 42 2.17e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrXIII:504728-505167 - 3 2.17e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CA chrI:180980-181391 - 11 2.17e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrXV:710022-710357 - 67 2.17e-07 TATGAGCCCT GCGCGCTTCCACTGCGCCACG GCGCTGCTAA chrXVI:338782-339037 + 35 2.17e-07 TATGAGCCCT GCGCGCTTCCACTGCGCCACG GCGCTGCTAA chrIV:1461659-1462021 + 14 2.17e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrV:99966-100317 - 47 2.17e-07 TATGAGCCCT GCGCGCTTCCACTGCGCCACG GCGCTTAGCC chrVII:857319-857626 + 44 2.17e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrX:517741-517841 + 16 2.17e-07 TATGAGCCCT GCGCGCTTCCACTGCGCCACG GCGCTTAACT chrIV:1095194-1095620 + 79 3.39e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAG T chrVI:4481-4938 + 42 4.67e-07 CACCCACACA CACCACACCCACACACCCACA CCCACACACC chrXI:666465-666768 - 42 4.67e-07 ACCACACCCA CACCACACCCACACACCCACA ACCCTAACAC chrXII:11106-11488 + 48 4.67e-07 CCCACACCCA CACCACACCCACACACCCACA CCCACACACC chrXVI:560057-560462 + 55 5.18e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTCAAT chrVII:440623-440994 + 24 5.18e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCATATA chrVI:157760-158174 + 65 5.18e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTCTA chrVIII:358345-358747 + 48 5.18e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTACT chrIII:235-501 + 22 5.75e-07 CCCACACCAC ACCCACACCCACACACCCACA CCCTAACACT chrXIV:6585-6826 + 6 5.75e-07 ACCAC ACCCACACCCACACACCCACA CCCACACCCA chrXV:300898-301308 - 49 6.37e-07 CCCAAAGCGA GAATCATACCACTAGACCACA CGCCCGATCT chrI:138985-139278 - 76 6.37e-07 GCGA GAATCATACCACTAGACCACA CGCCCGTACT chrXII:92380-92676 - 75 6.37e-07 AGCGA GAATCATACCACTAGACCACA CGCCCTTATT chrXIII:195929-196380 + 41 6.37e-07 CCCAAAGCGA GAATCATACCACTAGACCACA CGCCCTTGTG chrXIV:546942-547267 - 45 6.37e-07 CCCAAAGCGA GAATCATACCACTAGACCACA CGCCCGATTA chrVI:162073-162381 - 56 1.04e-06 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTGTT chrX:396645-396745 + 18 1.04e-06 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTACT chrXV:281987-282343 - 54 1.04e-06 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCGCTTT chrXVI:860213-860515 - 70 1.04e-06 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTGTT chrX:531647-531747 - 4 1.04e-06 TGGCAACGTT GGATTTTACCACTAAACCACT TGC chrXV:226528-226823 + 31 1.04e-06 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTGAAT chrXVI:572081-572478 - 45 1.04e-06 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCGAAGT chrVII:930818-931216 + 31 1.04e-06 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTACT chrIV:1175673-1176047 - 24 1.15e-06 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCTTTGT chrXV:976248-976544 - 80 1.15e-06 . CGCTCTTCCTACTGAGCTACT GAAGCGCACA chrX:390933-391033 + 39 1.15e-06 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCACTAT chrXIII:572791-573123 + 23 1.15e-06 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCTGTCT chrX:538386-538486 - 53 1.26e-06 TAGGAGGGAG ACGCGTTACCATTACGCCAAC GGAACCAACT chrXIII:379193-379552 + 61 1.38e-06 TTGGAGTCGA AAGCTCTACCATTGAGCCACC GCTTCAACTT chrVII:287254-287623 + 42 1.38e-06 TTGGAGTCGA AAGCTCTACCATTGAGCCACC GCTTCATCTT chrXVI:56108-56464 + 13 1.38e-06 TTGGAGTCGA AAGCTCTACCATTGAGCCACC GCTTCAACTA chrVII:661576-661890 - 71 1.38e-06 ACAAGTGCA ACGCTCTACCACTAAGCTAAG GAGGCAAATT chrXI:302722-303140 - 42 1.38e-06 TTGGAGTCGA AAGCTCTACCATTGAGCCACC GCTTCATCTT chrXVI:744136-744497 - 23 1.38e-06 TACAAGTGCA ACGCTCTACCACTAAGCTAAG GAGGCTTTTA chrX:415860-415960 + 21 1.38e-06 TTGGAGTCGA AAGCTCTACCATTGAGCCACC GCTTCAACTT chrVII:878644-878974 + 31 1.38e-06 TTGGAGTCGA AAGCTCTACCATTGAGCCACC GCTTCATCTT chrVI:210573-210867 + 12 1.52e-06 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTCGTT chrX:354070-354170 - 73 1.52e-06 TCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTGATA chrXV:288051-288323 - 60 1.52e-06 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGAAGCT chrXIII:837764-838059 - 72 1.52e-06 GTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTCAAT chrVII:706975-707334 + 50 1.52e-06 TTGCAATCTG CTGCGCTACCACTGCGCCATA CGAGCTTGAT chrX:542834-542934 + 43 1.52e-06 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTATTT chrIV:946150-946572 - 6 1.52e-06 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAG chrXVI:435747-436144 + 44 1.52e-06 TTGCAATCTG CTGCGCTACCACTGCGCCATA CGAGCTTTTG chrXI:162325-162706 + 68 1.99e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACG CGAGCTAATA chrIV:411312-411590 + 58 1.99e-06 GGCACCCAAA GTCCCCACCCACACCACCAAT ACGTAAACGG chrX:374457-374557 + 15 1.99e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACG CGAGCTACTA chrXIII:131647-132060 + 68 1.99e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACG CGAGCTAAAT chrII:405694-406109 - 32 1.99e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACG CGAGCTACTA chrVII:405333-405714 - 2 1.99e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACG C chrVII:736176-736529 - 43 1.99e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACG CGAGCTATTG chrXI:46687-46954 + 11 2.37e-06 TACGAGTGCG ATGCCTTACCACTTGGCCAAA AGGGCTGAGT chrIV:1256930-1257241 + 19 2.37e-06 GGGAAGCATG AATTCTAACCACTGAACCACT TTCGCTAAGA chrXV:594280-594596 + 12 2.37e-06 GGGAAGCATA AATTCTAACCACTGAACCACT TGCGCGTTTC chrXII:673809-674222 - 59 2.81e-06 TAAAAAAATT AAGCAAAACCACAACACCACG CGTTATGACA chrXII:1064908-1065331 - 64 2.81e-06 TAGATATACA CACCACACCCACACCCACACC CACACCCACA chrXII:5499-5864 + 55 3.06e-06 ACCACACCCA CACCACACCCACACCCACACA CACCACACAC chrIV:50-275 + 15 3.06e-06 CACACCCACA CACCACACCCACACCCACACA CCACACACTA chrIII:32-308 + 74 3.06e-06 ACCACACCCA CACCACACCCACACCCACACA CCACAC chrV:6197-6538 + 22 3.61e-06 AAGTTACTTC ACCCACACCCACACCCACACA CCATGCTCAC chrVIII:562317-562607 - 68 5.38e-06 CACACCCACA CACCACACCCACACACACACC CACACCCACA chrXIII:924168-924408 - 80 5.81e-06 . CACCACACCCACACACACACA CCACACCCAC chrVII:779450-779808 - 42 6.76e-06 GGAAGGGTGG GATGATAACCACTACACTAAC CGCCCGGGGT chrXIV:96169-96466 + 20 6.76e-06 GGAAGGGTGG GATGATAACCACTACACTAAC CGCCCATGTG chrXV:622698-623038 - 28 8.43e-06 CAACGTTTAA ACCTTCACCAGCAACACCAAC AACAGCATCA chrII:350654-350953 - 79 9.73e-06 A AGTGATAACCACTACACTATA AAACCCTTTT chrVIII:134163-134501 - 44 9.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGGAAC chrIII:168198-168523 + 37 9.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCAGGAC chrIV:645085-645384 + 15 9.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGTAAC chrXII:448594-448888 + 5 9.73e-06 CGAA AGTGATAACCACTACACTATA GGACCGGAAC chrV:250134-250507 - 21 9.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCAGTAC chrXV:40-226 + 11 1.04e-05 ACCACACCCA CACACCACCCACACACACACA ACACTACCCT chrII:326697-327068 + 8 1.37e-05 AGGCGAC GTCTTGAACCACTGGACCATT GGACCCGGAA chrXIV:631765-632089 + 15 1.47e-05 CCCTAAGCGA GAATCATACCTCTAGACCACA CGCCCGGTAG chrIX:31-180 + 1 1.47e-05 . CCCACACACCACACCCACACC AACTCTCTCT chrIII:123502-123767 + 39 1.47e-05 CCCTAAGCGA GAATCATACCTCTAGACCACA CGCCCTCCTT chrXIV:783903-784148 - 64 3.09e-05 CCCACACACC CACACACACCACACCCACACA CTACCCTAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCBYWAMCCACTVVGCCAMV MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:437559-437948 2.2e-11 73_[-1]_6 chrV:86449-86761 2.2e-11 53_[-1]_26 chrXIII:259064-259408 2.2e-11 27_[+1]_52 chrVII:561464-561915 2.2e-11 78_[+1]_1 chrX:523894-523994 2.2e-11 43_[+1]_36 chrI:182423-182762 2.2e-11 35_[+1]_44 chrIV:1305466-1305769 2.2e-11 67_[-1]_12 chrXII:167899-168194 2.2e-11 3_[+1]_76 chrVIII:132916-133308 2.2e-11 19_[+1]_60 chrIV:1150819-1151109 7.7e-11 1_[+1]_78 chrVI:191397-191794 7.7e-11 42_[+1]_37 chrIII:227778-228140 2.4e-10 37_[-1]_42 chrXI:517837-518096 2.4e-10 76_[-1]_3 chrXIII:321038-321349 2.4e-10 50_[+1]_29 chrXI:219734-220019 2.4e-10 73_[-1]_6 chrVII:774171-774519 2.4e-10 58_[-1]_21 chrXVI:689390-689748 2.4e-10 50_[-1]_29 chrIV:410254-410486 2.4e-10 63_[-1]_16 chrXII:656824-657158 2.4e-10 39_[+1]_40 chrV:288338-288680 2.4e-10 39_[+1]_40 chrVI:204857-205135 2.4e-10 24_[+1]_55 chrXII:731900-732256 9.7e-10 66_[-1]_13 chrX:617746-617846 9.7e-10 38_[-1]_41 chrXII:592404-592784 9.7e-10 49_[+1]_30 chrXII:1051938-1052290 1.4e-09 54_[+1]_25 chrIX:183378-183681 1.4e-09 8_[+1]_71 chrXIV:602204-602407 1.4e-09 61_[-1]_18 chrXVI:880160-880521 1.4e-09 53_[+1]_26 chrIV:667851-668238 1.4e-09 60_[+1]_19 chrXIV:569834-570048 1.4e-09 23_[+1]_56 chrV:551194-551486 1.4e-09 42_[+1]_37 chrXV:854036-854409 1.7e-09 61_[+1]_18 chrXII:214770-215130 1.7e-09 29_[+1]_50 chrV:311964-312255 1.7e-09 10_[+1]_69 chrXV:353889-354269 9e-09 58_[+1]_21 chrV:492265-492576 9e-09 28_[+1]_51 chrIX:174888-175266 9e-09 8_[-1]_71 chrX:58985-59085 9e-09 37_[+1]_42 chrXV:340153-340551 9e-09 43_[+1]_36 chrXV:113665-113967 9e-09 40_[-1]_39 chrIV:619840-620177 9e-09 57_[+1]_22 chrIII:295340-295605 9e-09 66_[-1]_13 chrVIII:116023-116342 9e-09 21_[+1]_58 chrVII:122124-122376 1e-08 73_[-1]_6 chrIV:519569-519926 1e-08 50_[-1]_29 chrVI:226569-226900 1e-08 50_[+1]_29 chrXIII:480512-480838 1e-08 42_[+1]_37 chrV:135267-135662 1e-08 57_[+1]_22 chrXIV:726019-726379 1e-08 42_[+1]_37 chrIX:300110-300477 1e-08 31_[+1]_48 chrVII:185657-185925 1e-08 19_[+1]_60 chrV:435665-435986 1e-08 23_[+1]_56 chrIV:1201573-1201991 1e-08 22_[-1]_57 chrX:414818-414918 1e-08 15_[-1]_64 chrXI:202854-203136 1e-08 58_[-1]_21 chrIV:1352374-1352711 1e-08 20_[+1]_59 chrXVI:581907-582202 1e-08 62_[-1]_17 chrV:469292-469581 2.5e-08 75_[-1]_4 chrXI:379533-379788 2.5e-08 74_[-1]_5 chrXV:663631-664046 2.5e-08 71_[+1]_8 chrXI:308047-308356 2.5e-08 40_[+1]_39 chrV:438534-438887 2.5e-08 44_[-1]_35 chrVII:73770-74066 2.5e-08 8_[+1]_71 chrXII:687744-688132 2.5e-08 18_[+1]_61 chrVII:823315-823615 2.5e-08 71_[-1]_8 chrVII:412204-412534 2.5e-08 22_[+1]_57 chrXIII:420507-420827 2.5e-08 18_[+1]_61 chrX:378199-378299 2.5e-08 59_[-1]_20 chrVII:730968-731360 3.3e-08 27_[-1]_52 chrXI:74466-74799 3.3e-08 46_[-1]_33 chrXV:228146-228496 3.3e-08 64_[-1]_15 chrXIV:632445-632742 3.3e-08 60_[-1]_19 chrIV:884201-884494 3.3e-08 68_[-1]_11 chrXII:975923-976201 3.3e-08 18_[+1]_61 chrIV:359388-359830 5e-08 22_[-1]_57 chrVII:115326-115684 5e-08 37_[-1]_42 chrVII:422932-423290 2.2e-07 35_[-1]_44 chrVII:205362-205707 2.2e-07 41_[-1]_38 chrXIII:504728-505167 2.2e-07 2_[-1]_77 chrI:180980-181391 2.2e-07 10_[-1]_69 chrXV:710022-710357 2.2e-07 66_[-1]_13 chrXVI:338782-339037 2.2e-07 34_[+1]_45 chrIV:1461659-1462021 2.2e-07 13_[+1]_66 chrV:99966-100317 2.2e-07 46_[-1]_33 chrVII:857319-857626 2.2e-07 43_[+1]_36 chrX:517741-517841 2.2e-07 15_[+1]_64 chrIV:1095194-1095620 3.4e-07 78_[+1]_1 chrVI:4481-4938 4.7e-07 41_[+1]_38 chrXI:666465-666768 4.7e-07 41_[-1]_38 chrXII:11106-11488 4.7e-07 47_[+1]_32 chrXVI:560057-560462 5.2e-07 54_[+1]_25 chrVII:440623-440994 5.2e-07 23_[+1]_56 chrVI:157760-158174 5.2e-07 64_[+1]_15 chrVIII:358345-358747 5.2e-07 47_[+1]_32 chrIII:235-501 5.7e-07 21_[+1]_58 chrXIV:6585-6826 5.7e-07 5_[+1]_74 chrXV:300898-301308 6.4e-07 48_[-1]_31 chrI:138985-139278 6.4e-07 75_[-1]_4 chrXII:92380-92676 6.4e-07 74_[-1]_5 chrXIII:195929-196380 6.4e-07 40_[+1]_39 chrXIV:546942-547267 6.4e-07 44_[-1]_35 chrVI:162073-162381 1e-06 55_[-1]_24 chrX:396645-396745 1e-06 17_[+1]_62 chrXV:281987-282343 1e-06 53_[-1]_26 chrXVI:860213-860515 1e-06 69_[-1]_10 chrX:531647-531747 1e-06 3_[-1]_76 chrXV:226528-226823 1e-06 30_[+1]_49 chrXVI:572081-572478 1e-06 44_[-1]_35 chrVII:930818-931216 1e-06 30_[+1]_49 chrIV:1175673-1176047 1.1e-06 23_[-1]_56 chrXV:976248-976544 1.1e-06 79_[-1] chrX:390933-391033 1.1e-06 38_[+1]_41 chrXIII:572791-573123 1.1e-06 22_[+1]_57 chrX:538386-538486 1.3e-06 52_[-1]_27 chrXIII:379193-379552 1.4e-06 60_[+1]_19 chrVII:287254-287623 1.4e-06 41_[+1]_38 chrXVI:56108-56464 1.4e-06 12_[+1]_67 chrVII:661576-661890 1.4e-06 70_[-1]_9 chrXI:302722-303140 1.4e-06 41_[-1]_38 chrXVI:744136-744497 1.4e-06 22_[-1]_57 chrX:415860-415960 1.4e-06 20_[+1]_59 chrVII:878644-878974 1.4e-06 30_[+1]_49 chrVI:210573-210867 1.5e-06 11_[+1]_68 chrX:354070-354170 1.5e-06 72_[-1]_7 chrXV:288051-288323 1.5e-06 59_[-1]_20 chrXIII:837764-838059 1.5e-06 71_[-1]_8 chrVII:706975-707334 1.5e-06 49_[+1]_30 chrX:542834-542934 1.5e-06 42_[+1]_37 chrIV:946150-946572 1.5e-06 5_[-1]_74 chrXVI:435747-436144 1.5e-06 43_[+1]_36 chrXI:162325-162706 2e-06 67_[+1]_12 chrIV:411312-411590 2e-06 57_[+1]_22 chrX:374457-374557 2e-06 14_[+1]_65 chrXIII:131647-132060 2e-06 67_[+1]_12 chrII:405694-406109 2e-06 31_[-1]_48 chrVII:405333-405714 2e-06 1_[-1]_78 chrVII:736176-736529 2e-06 42_[-1]_37 chrXI:46687-46954 2.4e-06 10_[+1]_69 chrIV:1256930-1257241 2.4e-06 18_[+1]_61 chrXV:594280-594596 2.4e-06 11_[+1]_68 chrXII:673809-674222 2.8e-06 58_[-1]_21 chrXII:1064908-1065331 2.8e-06 63_[-1]_16 chrXII:5499-5864 3.1e-06 54_[+1]_25 chrIV:50-275 3.1e-06 14_[+1]_65 chrIII:32-308 3.1e-06 73_[+1]_6 chrV:6197-6538 3.6e-06 21_[+1]_58 chrVIII:562317-562607 5.4e-06 67_[-1]_12 chrXIII:924168-924408 5.8e-06 79_[-1] chrVII:779450-779808 6.8e-06 41_[-1]_38 chrXIV:96169-96466 6.8e-06 19_[+1]_60 chrXV:622698-623038 8.4e-06 27_[-1]_52 chrII:350654-350953 9.7e-06 78_[-1]_1 chrVIII:134163-134501 9.7e-06 43_[-1]_36 chrIII:168198-168523 9.7e-06 36_[+1]_43 chrIV:645085-645384 9.7e-06 14_[+1]_65 chrXII:448594-448888 9.7e-06 4_[+1]_75 chrV:250134-250507 9.7e-06 20_[-1]_59 chrXV:40-226 1e-05 10_[+1]_69 chrII:326697-327068 1.4e-05 7_[+1]_72 chrXIV:631765-632089 1.5e-05 14_[+1]_65 chrIX:31-180 1.5e-05 [+1]_79 chrIII:123502-123767 1.5e-05 38_[+1]_41 chrXIV:783903-784148 3.1e-05 63_[-1]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCBYWAMCCACTVVGCCAMV MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SSCBYWAMCCACTVVGCCAMV width=21 seqs=163 chrIV:437559-437948 ( 74) CGCCTTAACCACTCGGCCAAG 1 chrV:86449-86761 ( 54) CGCCTTAACCACTCGGCCAAG 1 chrXIII:259064-259408 ( 28) CGCCTTAACCACTCGGCCAAG 1 chrVII:561464-561915 ( 79) CGCCTTAACCACTCGGCCAAG 1 chrX:523894-523994 ( 44) CGCCTTAACCACTCGGCCAAG 1 chrI:182423-182762 ( 36) CGCCTTAACCACTCGGCCAAG 1 chrIV:1305466-1305769 ( 68) CGCCTTAACCACTCGGCCAAG 1 chrXII:167899-168194 ( 4) CGCCTTAACCACTCGGCCAAG 1 chrVIII:132916-133308 ( 20) CGCCTTAACCACTCGGCCAAG 1 chrIV:1150819-1151109 ( 2) CGCCTTAACCACTCGGCCACT 1 chrVI:191397-191794 ( 43) CGCCTTAACCACTCGGCCACT 1 chrIII:227778-228140 ( 38) CGCCTTAACCACTCGGCCATA 1 chrXI:517837-518096 ( 77) CGCGCTACCGACTACGCCACA 1 chrXIII:321038-321349 ( 51) CGCGCTACCGACTACGCCACA 1 chrXI:219734-220019 ( 74) CGCGCTACCGACTACGCCACA 1 chrVII:774171-774519 ( 59) CGCGCTACCGACTACGCCACA 1 chrXVI:689390-689748 ( 51) CGCCTTAACCACTCGGCCATA 1 chrIV:410254-410486 ( 64) CGCGCTACCGACTACGCCACA 1 chrXII:656824-657158 ( 40) CGCGCTACCGACTACGCCACA 1 chrV:288338-288680 ( 40) CGCCTTAACCACTCGGCCATA 1 chrVI:204857-205135 ( 25) CGCGCTACCGACTACGCCACA 1 chrXII:731900-732256 ( 67) GCCTTAAACCACTCGGCCAAA 1 chrX:617746-617846 ( 39) GCCTTAAACCACTCGGCCAAA 1 chrXII:592404-592784 ( 50) GCCTTAAACCACTCGGCCAAA 1 chrXII:1051938-1052290 ( 55) GCCTTAACCAACTGGGCCAAG 1 chrIX:183378-183681 ( 9) GCCTTAACCAACTGGGCCAAG 1 chrXIV:602204-602407 ( 62) GCCTTAACCAACTGGGCCAAG 1 chrXVI:880160-880521 ( 54) GCCTTAACCAACTGGGCCAAG 1 chrIV:667851-668238 ( 61) GCCTTAACCAACTGGGCCAAG 1 chrXIV:569834-570048 ( 24) GCCTTAACCAACTGGGCCAAG 1 chrV:551194-551486 ( 43) GCCTTAACCAACTGGGCCAAG 1 chrXV:854036-854409 ( 62) CGCGCTACCAACTGCGCCATG 1 chrXII:214770-215130 ( 30) CGCGCTACCAACTGCGCCATG 1 chrV:311964-312255 ( 11) CGCGCTACCAACTGCGCCATG 1 chrXV:353889-354269 ( 59) CGCCTTACCAACTTGGCCATA 1 chrV:492265-492576 ( 29) CGCCGTGACCATTGGGCCACG 1 chrIX:174888-175266 ( 9) CGCCTTACCAACTTGGCCATA 1 chrX:58985-59085 ( 38) CGCCTTACCAACTTGGCCATA 1 chrXV:340153-340551 ( 44) CGCCGTGACCATTGGGCCACG 1 chrXV:113665-113967 ( 41) CGCCTTACCAACTTGGCCATA 1 chrIV:619840-620177 ( 58) CGCCGTGACCATTGGGCCACG 1 chrIII:295340-295605 ( 67) CGCCTTACCAACTTGGCCATA 1 chrVIII:116023-116342 ( 22) CGCCTTACCAACTTGGCCATA 1 chrVII:122124-122376 ( 74) CGCGCTACCGATTGCGCCAAC 1 chrIV:519569-519926 ( 51) GCCTTAGACCACTCGGCCAAC 1 chrVI:226569-226900 ( 51) CGCGCTACCGATTGCGCCAAC 1 chrXIII:480512-480838 ( 43) CGCGCTACCGATTGCGCCAAC 1 chrV:135267-135662 ( 58) CGCGCTACCGATTGCGCCAAC 1 chrXIV:726019-726379 ( 43) GCCTTAGACCACTCGGCCAAC 1 chrIX:300110-300477 ( 32) CGCGCTACCGATTGCGCCAAC 1 chrVII:185657-185925 ( 20) CGCGCTACCGATTGCGCCAAC 1 chrV:435665-435986 ( 24) CGCGCTACCGATTGCGCCAAC 1 chrIV:1201573-1201991 ( 23) CGCGCTACCGATTGCGCCAAC 1 chrX:414818-414918 ( 16) CGCGCTACCGATTGCGCCAAC 1 chrXI:202854-203136 ( 59) CGCGCTACCGATTGCGCCAAC 1 chrIV:1352374-1352711 ( 21) CGCGCTACCGATTGCGCCAAC 1 chrXVI:581907-582202 ( 63) CGCGCTACCGATTGCGCCAAC 1 chrV:469292-469581 ( 76) GCCATAACCGACTAGACCACG 1 chrXI:379533-379788 ( 75) GCCATAACCGACTAGACCACG 1 chrXV:663631-664046 ( 72) GCCATAACCGACTAGACCACG 1 chrXI:308047-308356 ( 41) GCCATAACCGACTAGACCACG 1 chrV:438534-438887 ( 45) GCCATAACCGACTAGACCACG 1 chrVII:73770-74066 ( 9) GCCATAACCGACTAGACCACG 1 chrXII:687744-688132 ( 19) GCCATAACCGACTAGACCACG 1 chrVII:823315-823615 ( 72) GCCATAACCGACTAGACCACG 1 chrVII:412204-412534 ( 23) GCCATAACCGACTAGACCACG 1 chrXIII:420507-420827 ( 19) GCCATAACCGACTAGACCACG 1 chrX:378199-378299 ( 60) GCCATAACCGACTAGACCACG 1 chrVII:730968-731360 ( 28) GCCTTAACCAACTTGGCCATG 1 chrXI:74466-74799 ( 47) GCCTTAACCAACTTGGCCATG 1 chrXV:228146-228496 ( 65) GCCTTAACCAACTTGGCCATG 1 chrXIV:632445-632742 ( 61) GCCTTAACCAACTTGGCCATG 1 chrIV:884201-884494 ( 69) AGCTCTAACCACTGAGCTACA 1 chrXII:975923-976201 ( 19) GCCTTAACCAACTTGGCCATG 1 chrIV:359388-359830 ( 23) CGCTCTACCAACTGAGCTAAC 1 chrVII:115326-115684 ( 38) CGCTCTACCAACTGAGCTAAC 1 chrVII:422932-423290 ( 36) GCCTTAGACCGCTCGGCCAAA 1 chrVII:205362-205707 ( 42) GCCTTAGACCGCTCGGCCAAA 1 chrXIII:504728-505167 ( 3) GCCTTAGACCGCTCGGCCAAA 1 chrI:180980-181391 ( 11) GCCTTAGACCGCTCGGCCAAA 1 chrXV:710022-710357 ( 67) GCGCGCTTCCACTGCGCCACG 1 chrXVI:338782-339037 ( 35) GCGCGCTTCCACTGCGCCACG 1 chrIV:1461659-1462021 ( 14) GCCTTAGACCGCTCGGCCAAA 1 chrV:99966-100317 ( 47) GCGCGCTTCCACTGCGCCACG 1 chrVII:857319-857626 ( 44) GCCTTAGACCGCTCGGCCAAA 1 chrX:517741-517841 ( 16) GCGCGCTTCCACTGCGCCACG 1 chrIV:1095194-1095620 ( 79) CGCTCTCCCAACTGAGCTAAG 1 chrVI:4481-4938 ( 42) CACCACACCCACACACCCACA 1 chrXI:666465-666768 ( 42) CACCACACCCACACACCCACA 1 chrXII:11106-11488 ( 48) CACCACACCCACACACCCACA 1 chrXVI:560057-560462 ( 55) CGCTCTCCCAACTGAGCTAAA 1 chrVII:440623-440994 ( 24) CGCTCTCCCAACTGAGCTAAA 1 chrVI:157760-158174 ( 65) CGCTCTCCCAACTGAGCTAAA 1 chrVIII:358345-358747 ( 48) CGCTCTCCCAACTGAGCTAAA 1 chrIII:235-501 ( 22) ACCCACACCCACACACCCACA 1 chrXIV:6585-6826 ( 6) ACCCACACCCACACACCCACA 1 chrXV:300898-301308 ( 49) GAATCATACCACTAGACCACA 1 chrI:138985-139278 ( 76) GAATCATACCACTAGACCACA 1 chrXII:92380-92676 ( 75) GAATCATACCACTAGACCACA 1 chrXIII:195929-196380 ( 41) GAATCATACCACTAGACCACA 1 chrXIV:546942-547267 ( 45) GAATCATACCACTAGACCACA 1 chrVI:162073-162381 ( 56) GGATTTTACCACTAAACCACT 1 chrX:396645-396745 ( 18) GGATTTTACCACTAAACCACT 1 chrXV:281987-282343 ( 54) GGATTTTACCACTAAACCACT 1 chrXVI:860213-860515 ( 70) GGATTTTACCACTAAACCACT 1 chrX:531647-531747 ( 4) GGATTTTACCACTAAACCACT 1 chrXV:226528-226823 ( 31) GGATTTTACCACTAAACCACT 1 chrXVI:572081-572478 ( 45) GGATTTTACCACTAAACCACT 1 chrVII:930818-931216 ( 31) GGATTTTACCACTAAACCACT 1 chrIV:1175673-1176047 ( 24) CGCTCTTCCTACTGAGCTACT 1 chrXV:976248-976544 ( 80) CGCTCTTCCTACTGAGCTACT 1 chrX:390933-391033 ( 39) CGCTCTTCCTACTGAGCTACT 1 chrXIII:572791-573123 ( 23) CGCTCTTCCTACTGAGCTACT 1 chrX:538386-538486 ( 53) ACGCGTTACCATTACGCCAAC 1 chrXIII:379193-379552 ( 61) AAGCTCTACCATTGAGCCACC 1 chrVII:287254-287623 ( 42) AAGCTCTACCATTGAGCCACC 1 chrXVI:56108-56464 ( 13) AAGCTCTACCATTGAGCCACC 1 chrVII:661576-661890 ( 71) ACGCTCTACCACTAAGCTAAG 1 chrXI:302722-303140 ( 42) AAGCTCTACCATTGAGCCACC 1 chrXVI:744136-744497 ( 23) ACGCTCTACCACTAAGCTAAG 1 chrX:415860-415960 ( 21) AAGCTCTACCATTGAGCCACC 1 chrVII:878644-878974 ( 31) AAGCTCTACCATTGAGCCACC 1 chrVI:210573-210867 ( 12) CCTTAAACCAACTTGGCTACC 1 chrX:354070-354170 ( 73) CCTTAAACCAACTTGGCTACC 1 chrXV:288051-288323 ( 60) CCTTAAACCAACTTGGCTACC 1 chrXIII:837764-838059 ( 72) CCTTAAACCAACTTGGCTACC 1 chrVII:706975-707334 ( 50) CTGCGCTACCACTGCGCCATA 1 chrX:542834-542934 ( 43) CCTTAAACCAACTTGGCTACC 1 chrIV:946150-946572 ( 6) CCTTAAACCAACTTGGCTACC 1 chrXVI:435747-436144 ( 44) CTGCGCTACCACTGCGCCATA 1 chrXI:162325-162706 ( 68) ACGCGTTGCCATTACGCCACG 1 chrIV:411312-411590 ( 58) GTCCCCACCCACACCACCAAT 1 chrX:374457-374557 ( 15) ACGCGTTGCCATTACGCCACG 1 chrXIII:131647-132060 ( 68) ACGCGTTGCCATTACGCCACG 1 chrII:405694-406109 ( 32) ACGCGTTGCCATTACGCCACG 1 chrVII:405333-405714 ( 2) ACGCGTTGCCATTACGCCACG 1 chrVII:736176-736529 ( 43) ACGCGTTGCCATTACGCCACG 1 chrXI:46687-46954 ( 11) ATGCCTTACCACTTGGCCAAA 1 chrIV:1256930-1257241 ( 19) AATTCTAACCACTGAACCACT 1 chrXV:594280-594596 ( 12) AATTCTAACCACTGAACCACT 1 chrXII:673809-674222 ( 59) AAGCAAAACCACAACACCACG 1 chrXII:1064908-1065331 ( 64) CACCACACCCACACCCACACC 1 chrXII:5499-5864 ( 55) CACCACACCCACACCCACACA 1 chrIV:50-275 ( 15) CACCACACCCACACCCACACA 1 chrIII:32-308 ( 74) CACCACACCCACACCCACACA 1 chrV:6197-6538 ( 22) ACCCACACCCACACCCACACA 1 chrVIII:562317-562607 ( 68) CACCACACCCACACACACACC 1 chrXIII:924168-924408 ( 80) CACCACACCCACACACACACA 1 chrVII:779450-779808 ( 42) GATGATAACCACTACACTAAC 1 chrXIV:96169-96466 ( 20) GATGATAACCACTACACTAAC 1 chrXV:622698-623038 ( 28) ACCTTCACCAGCAACACCAAC 1 chrII:350654-350953 ( 79) AGTGATAACCACTACACTATA 1 chrVIII:134163-134501 ( 44) AGTGATAACCACTACACTATA 1 chrIII:168198-168523 ( 37) AGTGATAACCACTACACTATA 1 chrIV:645085-645384 ( 15) AGTGATAACCACTACACTATA 1 chrXII:448594-448888 ( 5) AGTGATAACCACTACACTATA 1 chrV:250134-250507 ( 21) AGTGATAACCACTACACTATA 1 chrXV:40-226 ( 11) CACACCACCCACACACACACA 1 chrII:326697-327068 ( 8) GTCTTGAACCACTGGACCATT 1 chrXIV:631765-632089 ( 15) GAATCATACCTCTAGACCACA 1 chrIX:31-180 ( 1) CCCACACACCACACCCACACC 1 chrIII:123502-123767 ( 39) GAATCATACCTCTAGACCACA 1 chrXIV:783903-784148 ( 64) CACACACACCACACCCACACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCBYWAMCCACTVVGCCAMV MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47465 bayes= 9.14315 E= 7.3e-394 -80 137 96 -1399 -85 98 128 -338 -180 189 -35 -171 -190 101 3 20 -95 71 -87 46 -6 -2 -487 67 100 -207 -141 -35 42 150 -229 -370 -1399 247 -1399 -1399 -58 168 3 -370 156 -1399 -207 -470 -1399 220 -1399 -90 -154 -1399 -1399 147 0 48 83 -154 -46 85 130 -1399 -38 -97 188 -1399 -238 238 -1399 -1399 -1399 220 -1399 -90 164 -1399 -1399 -1399 5 150 -1399 -100 15 26 83 -154 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCBYWAMCCACTVVGCCAMV MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 163 E= 7.3e-394 0.184049 0.466258 0.349693 0.000000 0.177914 0.355828 0.435583 0.030675 0.092025 0.668712 0.141104 0.098160 0.085890 0.361963 0.184049 0.368098 0.165644 0.294479 0.098160 0.441718 0.306748 0.177914 0.006135 0.509202 0.638037 0.042945 0.067485 0.251534 0.429448 0.509202 0.036810 0.024540 0.000000 1.000000 0.000000 0.000000 0.214724 0.576687 0.184049 0.024540 0.944785 0.000000 0.042945 0.012270 0.000000 0.828221 0.000000 0.171779 0.110429 0.000000 0.000000 0.889571 0.319018 0.251534 0.319018 0.110429 0.233129 0.325153 0.441718 0.000000 0.245399 0.092025 0.662577 0.000000 0.061350 0.938650 0.000000 0.000000 0.000000 0.828221 0.000000 0.171779 1.000000 0.000000 0.000000 0.000000 0.331288 0.509202 0.000000 0.159509 0.355828 0.214724 0.319018 0.110429 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCBYWAMCCACTVVGCCAMV MEME-1 regular expression -------------------------------------------------------------------------------- [CG][GC]C[TC][TC][TA][AT][CA]C[CA]ACT[AGC][GCA][GA]CCA[CA][AGC] -------------------------------------------------------------------------------- Time 350.56 secs. ******************************************************************************** ******************************************************************************** MOTIF SGGRRTCGAACCSVKGAYCTYMNGRTTAN MEME-2 width = 29 sites = 58 llr = 1223 E-value = 1.2e-248 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYMNGRTTAN MEME-2 Description -------------------------------------------------------------------------------- Simplified A 13:54:::aa::13:37:::232:61:73 pos.-specific C 4:::2:8:::a8531::583463311113 probability G 57a52::a::::44571:1:::2731222 matrix T 1:::2a2::::21:4:2526413::8712 bits 2.5 * * * 2.2 * * * 2.0 * * * 1.7 * ****** Relative 1.5 * ****** * * Entropy 1.2 * ******* * * * (30.4 bits) 1.0 **** ******* * ** * 0.7 **** ******** * *** * * 0.5 **** ***************** ***** 0.2 **** ***************** ****** 0.0 ----------------------------- Multilevel GGGAATCGAACCCGGGACCTCCCGATTAC consensus CA GG GATATT CTATCG GA sequence C A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYMNGRTTAN MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXII:1051938-1052290 + 17 2.93e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTTAT TAGCACGGTG chrXVI:880160-880521 + 16 2.93e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTTAT TAGCACGGTG chrIV:667851-668238 + 23 2.93e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTTAT TAGCACGGTG chrII:197285-197853 - 10 2.93e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTTAT TAGCACGGT chrV:551194-551486 + 5 2.93e-13 CTAG CGGGATCGAACCGCTGATCCCCGCGTTAT TAGCACGGTG chrXI:162325-162706 + 32 8.85e-13 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrXIII:131647-132060 + 32 8.85e-13 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrII:405694-406109 - 60 8.85e-13 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrVII:405333-405714 - 30 8.85e-13 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrV:138500-138965 - 17 8.85e-13 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrVII:736176-736529 - 71 8.85e-13 T GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrVI:226569-226900 + 14 2.13e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrXIII:480512-480838 + 6 2.13e-12 TGTAG GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrV:135267-135662 + 21 2.13e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrIV:1201573-1201991 - 52 2.13e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrX:414818-414918 - 45 2.13e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrVI:180751-181192 + 63 3.23e-12 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATGGC AACGTTGGA chrX:531647-531747 - 31 3.23e-12 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATGGC AACGTTGGAT chrXVI:572081-572478 - 72 3.23e-12 . CGGAATCGAACCGGGGGCCCAACGATGGC AACGTTGGAT chrV:61671-62131 + 49 3.23e-12 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATGGC AACGTTGGAT chrX:115796-115896 + 18 3.71e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrVII:541633-542127 - 53 3.71e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrXI:140787-141253 + 58 3.71e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrVII:328401-328869 - 31 3.71e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrV:487191-487555 + 18 3.71e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrIII:123502-123767 + 3 5.54e-12 CC GGGACTCGAACCCGGGACCTCCCGCACCC TAAGCGAGAA chrXV:854036-854409 + 25 7.18e-12 TGGACGCAAC CGGAATCGAACCGATGACCTCTTCCTTGC AAGGGAAGCG chrXV:353889-354269 + 22 1.72e-11 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrIX:174888-175266 - 38 1.72e-11 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrX:58985-59085 + 1 1.72e-11 . CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrXV:113665-113967 - 70 1.72e-11 AT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrVIII:134163-134501 - 72 1.94e-11 . CGGATTCGAACCGGGGTTGTCCGGATCAA AACCGAAAGT chrIII:168198-168523 + 1 1.94e-11 . CGGATTCGAACCGGGGTTGTCCGGATCAA AACCGAAAGT chrV:250134-250507 - 49 1.94e-11 AGGTCCTACC CGGATTCGAACCGGGGTTGTCCGGATCAA AACCGAAAGT chrXIII:321038-321349 + 14 3.75e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTCTCCCATGC TAAGGGAGCG chrXII:656824-657158 + 3 3.75e-10 TC CGGAATCGAACCGGAGACCTCTCCCATGC TAAGGGAGCG chrIV:488573-489024 + 59 5.93e-10 TGATCCAACC GAGGTTCGAACTCGGGATCTTCGCCGTGT AAAGGCGACG chrIV:1175673-1176047 - 53 6.48e-10 TGCTCCAGGG GAGGTTCGAACTCTCGACCTTCAGATTAT GAGACTGACG chrX:390933-391033 + 2 6.48e-10 G GAGGTTCGAACTCTCGACCTTCAGATTAT GAGACTGACG chrVII:779450-779808 - 70 7.08e-10 AC GAGAATCGAACCCGTGTCCCCACCTTGGA AGGGTGGGAT chrXV:663631-664046 + 34 7.08e-10 CGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGTGT TAAGCAGATG chrXI:308047-308356 + 3 7.08e-10 CC CAGGATCGAACTGGGGACGTTCTGCGTGT TAAGCAGATG chrVI:157760-158174 + 9 7.08e-10 CGAATTCT GTGGATCGAACACAGGACCTCCAGATAAC TTGACCGAAG chrIV:1075351-1075664 + 25 8.44e-10 TGTTCCAACC GAGGATCGAACTCGGGACCTTTGCCGTGT GAAGGCAACG chrVII:730968-731360 - 58 1.52e-09 CGACCCCAGT GAGGGTTGAACTCACGATCTTGCGATTAA CAGTCGCACG chrVI:137299-137708 + 43 1.52e-09 CGACCCCAGT GAGGGTTGAACTCACGATCTTGCGATTAA CAGTCGCACG chrIV:1095194-1095620 + 23 3.89e-09 TGCGAACTCT GTGGATCGAACACAGGACCTCCAGATATC TTGACCAAAG chrXV:340153-340551 + 7 6.01e-09 CCCGCC AGGACTTGAACCTGGAATCTTCTGGTTCG TAGCCAGACG chrXII:374203-374646 - 15 6.01e-09 CTTCCCCGCC AGGACTTGAACCTGGAATCTTCTGGTTCG TAGCCAGACG chrIV:619840-620177 + 21 6.01e-09 CTTCCCCGCC AGGACTTGAACCTGGAATCTTCTGGTTCG TAGCCAGACG chrXVI:744136-744497 - 51 6.01e-09 TGCCACCTGT CAGAATTGAACTAACGACCTTTGCATTAC AAGTGCAACG chrVII:706975-707334 + 14 6.45e-09 AGCTCGCACT CAGGATCGAACTAAGGACCAACAGATTTG CAATCTGCTG chrXVI:435747-436144 + 8 6.45e-09 TCGCACT CAGGATCGAACTAAGGACCAACAGATTTG CAATCTGCTG chrIV:946150-946572 - 51 6.91e-09 TCTCCCGGGG GCGAGTCGAACGCCCGATCTCAAGATTTC GTAGTGATAA chrXIII:362926-363247 - 61 3.53e-08 TGCCATCTCC TAGAATCGAACCAGGGTTTCATCGGCCAC AACGATGTGT chrVII:319623-319985 - 60 3.53e-08 TGCCATCTCC TAGAATCGAACCAGGGTTTCATCGGCCAC AACGATGTGT chrV:434424-434767 + 6 3.53e-08 TCTCC TAGAATCGAACCAGGGTTTCATCGGCCAC AACGATGTGT chrIX:324160-324527 + 20 5.76e-08 CTCCGCGACG GGGAATTGAACCCCGATCTGGCACGCGAC AAGCGCCCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYMNGRTTAN MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:1051938-1052290 2.9e-13 16_[+2]_55 chrXVI:880160-880521 2.9e-13 15_[+2]_56 chrIV:667851-668238 2.9e-13 22_[+2]_49 chrII:197285-197853 2.9e-13 9_[-2]_62 chrV:551194-551486 2.9e-13 4_[+2]_67 chrXI:162325-162706 8.8e-13 31_[+2]_40 chrXIII:131647-132060 8.8e-13 31_[+2]_40 chrII:405694-406109 8.8e-13 59_[-2]_12 chrVII:405333-405714 8.8e-13 29_[-2]_42 chrV:138500-138965 8.8e-13 16_[-2]_55 chrVII:736176-736529 8.8e-13 70_[-2]_1 chrVI:226569-226900 2.1e-12 13_[+2]_58 chrXIII:480512-480838 2.1e-12 5_[+2]_66 chrV:135267-135662 2.1e-12 20_[+2]_51 chrIV:1201573-1201991 2.1e-12 51_[-2]_20 chrX:414818-414918 2.1e-12 44_[-2]_27 chrVI:180751-181192 3.2e-12 62_[+2]_9 chrX:531647-531747 3.2e-12 30_[-2]_41 chrXVI:572081-572478 3.2e-12 71_[-2] chrV:61671-62131 3.2e-12 48_[+2]_23 chrX:115796-115896 3.7e-12 17_[+2]_54 chrVII:541633-542127 3.7e-12 52_[-2]_19 chrXI:140787-141253 3.7e-12 57_[+2]_14 chrVII:328401-328869 3.7e-12 30_[-2]_41 chrV:487191-487555 3.7e-12 17_[+2]_54 chrIII:123502-123767 5.5e-12 2_[+2]_69 chrXV:854036-854409 7.2e-12 24_[+2]_47 chrXV:353889-354269 1.7e-11 21_[+2]_50 chrIX:174888-175266 1.7e-11 37_[-2]_34 chrX:58985-59085 1.7e-11 [+2]_71 chrXV:113665-113967 1.7e-11 69_[-2]_2 chrVIII:134163-134501 1.9e-11 71_[-2] chrIII:168198-168523 1.9e-11 [+2]_71 chrV:250134-250507 1.9e-11 48_[-2]_23 chrXIII:321038-321349 3.7e-10 13_[+2]_58 chrXII:656824-657158 3.7e-10 2_[+2]_69 chrIV:488573-489024 5.9e-10 58_[+2]_13 chrIV:1175673-1176047 6.5e-10 52_[-2]_19 chrX:390933-391033 6.5e-10 1_[+2]_70 chrVII:779450-779808 7.1e-10 69_[-2]_2 chrXV:663631-664046 7.1e-10 33_[+2]_38 chrXI:308047-308356 7.1e-10 2_[+2]_69 chrVI:157760-158174 7.1e-10 8_[+2]_63 chrIV:1075351-1075664 8.4e-10 24_[+2]_47 chrVII:730968-731360 1.5e-09 57_[-2]_14 chrVI:137299-137708 1.5e-09 42_[+2]_29 chrIV:1095194-1095620 3.9e-09 22_[+2]_49 chrXV:340153-340551 6e-09 6_[+2]_65 chrXII:374203-374646 6e-09 14_[-2]_57 chrIV:619840-620177 6e-09 20_[+2]_51 chrXVI:744136-744497 6e-09 50_[-2]_21 chrVII:706975-707334 6.4e-09 13_[+2]_58 chrXVI:435747-436144 6.4e-09 7_[+2]_64 chrIV:946150-946572 6.9e-09 50_[-2]_21 chrXIII:362926-363247 3.5e-08 60_[-2]_11 chrVII:319623-319985 3.5e-08 59_[-2]_12 chrV:434424-434767 3.5e-08 5_[+2]_66 chrIX:324160-324527 5.8e-08 19_[+2]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYMNGRTTAN MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGGRRTCGAACCSVKGAYCTYMNGRTTAN width=29 seqs=58 chrXII:1051938-1052290 ( 17) CGGGATCGAACCGCTGATCCCCGCGTTAT 1 chrXVI:880160-880521 ( 16) CGGGATCGAACCGCTGATCCCCGCGTTAT 1 chrIV:667851-668238 ( 23) CGGGATCGAACCGCTGATCCCCGCGTTAT 1 chrII:197285-197853 ( 10) CGGGATCGAACCGCTGATCCCCGCGTTAT 1 chrV:551194-551486 ( 5) CGGGATCGAACCGCTGATCCCCGCGTTAT 1 chrXI:162325-162706 ( 32) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrXIII:131647-132060 ( 32) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrII:405694-406109 ( 60) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrVII:405333-405714 ( 30) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrV:138500-138965 ( 17) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrVII:736176-736529 ( 71) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrVI:226569-226900 ( 14) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrXIII:480512-480838 ( 6) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrV:135267-135662 ( 21) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrIV:1201573-1201991 ( 52) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrX:414818-414918 ( 45) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrVI:180751-181192 ( 63) CGGAATCGAACCGGGGGCCCAACGATGGC 1 chrX:531647-531747 ( 31) CGGAATCGAACCGGGGGCCCAACGATGGC 1 chrXVI:572081-572478 ( 72) CGGAATCGAACCGGGGGCCCAACGATGGC 1 chrV:61671-62131 ( 49) CGGAATCGAACCGGGGGCCCAACGATGGC 1 chrX:115796-115896 ( 18) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrVII:541633-542127 ( 53) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrXI:140787-141253 ( 58) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrVII:328401-328869 ( 31) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrV:487191-487555 ( 18) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrIII:123502-123767 ( 3) GGGACTCGAACCCGGGACCTCCCGCACCC 1 chrXV:854036-854409 ( 25) CGGAATCGAACCGATGACCTCTTCCTTGC 1 chrXV:353889-354269 ( 22) CGGATTTGAACCGATGATCTCCACATTAC 1 chrIX:174888-175266 ( 38) CGGATTTGAACCGATGATCTCCACATTAC 1 chrX:58985-59085 ( 1) CGGATTTGAACCGATGATCTCCACATTAC 1 chrXV:113665-113967 ( 70) CGGATTTGAACCGATGATCTCCACATTAC 1 chrVIII:134163-134501 ( 72) CGGATTCGAACCGGGGTTGTCCGGATCAA 1 chrIII:168198-168523 ( 1) CGGATTCGAACCGGGGTTGTCCGGATCAA 1 chrV:250134-250507 ( 49) CGGATTCGAACCGGGGTTGTCCGGATCAA 1 chrXIII:321038-321349 ( 14) CGGAATCGAACCGGAGACCTCTCCCATGC 1 chrXII:656824-657158 ( 3) CGGAATCGAACCGGAGACCTCTCCCATGC 1 chrIV:488573-489024 ( 59) GAGGTTCGAACTCGGGATCTTCGCCGTGT 1 chrIV:1175673-1176047 ( 53) GAGGTTCGAACTCTCGACCTTCAGATTAT 1 chrX:390933-391033 ( 2) GAGGTTCGAACTCTCGACCTTCAGATTAT 1 chrVII:779450-779808 ( 70) GAGAATCGAACCCGTGTCCCCACCTTGGA 1 chrXV:663631-664046 ( 34) CAGGATCGAACTGGGGACGTTCTGCGTGT 1 chrXI:308047-308356 ( 3) CAGGATCGAACTGGGGACGTTCTGCGTGT 1 chrVI:157760-158174 ( 9) GTGGATCGAACACAGGACCTCCAGATAAC 1 chrIV:1075351-1075664 ( 25) GAGGATCGAACTCGGGACCTTTGCCGTGT 1 chrVII:730968-731360 ( 58) GAGGGTTGAACTCACGATCTTGCGATTAA 1 chrVI:137299-137708 ( 43) GAGGGTTGAACTCACGATCTTGCGATTAA 1 chrIV:1095194-1095620 ( 23) GTGGATCGAACACAGGACCTCCAGATATC 1 chrXV:340153-340551 ( 7) AGGACTTGAACCTGGAATCTTCTGGTTCG 1 chrXII:374203-374646 ( 15) AGGACTTGAACCTGGAATCTTCTGGTTCG 1 chrIV:619840-620177 ( 21) AGGACTTGAACCTGGAATCTTCTGGTTCG 1 chrXVI:744136-744497 ( 51) CAGAATTGAACTAACGACCTTTGCATTAC 1 chrVII:706975-707334 ( 14) CAGGATCGAACTAAGGACCAACAGATTTG 1 chrXVI:435747-436144 ( 8) CAGGATCGAACTAAGGACCAACAGATTTG 1 chrIV:946150-946572 ( 51) GCGAGTCGAACGCCCGATCTCAAGATTTC 1 chrXIII:362926-363247 ( 61) TAGAATCGAACCAGGGTTTCATCGGCCAC 1 chrVII:319623-319985 ( 60) TAGAATCGAACCAGGGTTTCATCGGCCAC 1 chrV:434424-434767 ( 6) TAGAATCGAACCAGGGTTTCATCGGCCAC 1 chrIX:324160-324527 ( 20) GGGAATTGAACCCCGATCTGGCACGCGAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYMNGRTTAN MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 42713 bayes= 9.40757 E= 1.2e-248 -263 120 142 -263 -31 -338 194 -321 -1250 -1250 247 -1250 69 -1250 142 -1250 43 -21 42 -89 -1250 -1250 -1250 164 -1250 217 -1250 -75 -1250 -1250 247 -1250 164 -1250 -1250 -1250 164 -1250 -1250 -1250 -1250 247 -1250 -1250 -321 208 -338 -75 -163 142 101 -263 -4 70 101 -321 -321 -80 142 24 -31 -1250 204 -1250 114 -1250 -138 -51 -1250 152 -1250 59 -1250 208 -106 -104 -321 79 -338 99 -104 126 -338 31 -21 162 -238 -121 -63 79 8 -13 -1250 70 197 -1250 79 -38 70 -421 -263 -138 -138 134 -321 -58 8 103 103 -138 20 -221 -21 94 8 -75 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYMNGRTTAN MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 58 E= 1.2e-248 0.051724 0.413793 0.482759 0.051724 0.258621 0.017241 0.689655 0.034483 0.000000 0.000000 1.000000 0.000000 0.517241 0.000000 0.482759 0.000000 0.431034 0.155172 0.241379 0.172414 0.000000 0.000000 0.000000 1.000000 0.000000 0.810345 0.000000 0.189655 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.034483 0.758621 0.017241 0.189655 0.103448 0.482759 0.362069 0.051724 0.310345 0.293103 0.362069 0.034483 0.034483 0.103448 0.482759 0.379310 0.258621 0.000000 0.741379 0.000000 0.706897 0.000000 0.068966 0.224138 0.000000 0.517241 0.000000 0.482759 0.000000 0.758621 0.086207 0.155172 0.034483 0.310345 0.017241 0.637931 0.155172 0.431034 0.017241 0.396552 0.275862 0.551724 0.034483 0.137931 0.206897 0.310345 0.189655 0.293103 0.000000 0.293103 0.706897 0.000000 0.551724 0.137931 0.293103 0.017241 0.051724 0.068966 0.068966 0.810345 0.034483 0.120690 0.189655 0.655172 0.655172 0.068966 0.206897 0.068966 0.275862 0.344828 0.189655 0.189655 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYMNGRTTAN MEME-2 regular expression -------------------------------------------------------------------------------- [GC][GA]G[AG][AG]TCGAACC[CG][GAC][GT][GA][AT][CT]C[TC][CT][CA][CTA][GC][AG]TT[AG][CA] -------------------------------------------------------------------------------- Time 658.65 secs. ******************************************************************************** ******************************************************************************** MOTIF DDDDWDWRRTGTAYGGRTGTW MEME-3 width = 21 sites = 127 llr = 1507 E-value = 1.1e-179 ******************************************************************************** -------------------------------------------------------------------------------- Motif DDDDWDWRRTGTAYGGRTGTW MEME-3 Description -------------------------------------------------------------------------------- Simplified A 323334436:::7:1:4:::5 pos.-specific C 1111111::::1:4:::::2: probability G 2323142531a:2:9a6:812 matrix T 4343423119:816:::a273 bits 2.5 * * 2.2 * * 2.0 * ** 1.7 * ** Relative 1.5 * ** ** Entropy 1.2 ** ***** (17.1 bits) 1.0 *** ***** 0.7 ***** ****** 0.5 ************* 0.2 * ************** 0.0 --------------------- Multilevel TGTTTAAGATGTATGGGTGTA consensus ATAGAGTAG GC A CT sequence GAGA T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DDDDWDWRRTGTAYGGRTGTW MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXII:1064908-1065331 + 17 3.53e-10 GTGGTGTGTG TGTGTGTGGTGTGTGGGTGTG GTGGGTGTGG chrXII:5499-5864 - 34 5.02e-10 GGGTGTGGTG TGGGTGTGGTGTGTGGGTGTG GTGTATATAT chrVIII:562317-562607 + 47 5.02e-10 GTGAAAAGTG TGGGTGTGGTGTGTGGGTGTG GGTGTGTGTG chrXII:11106-11488 - 21 5.02e-10 GGTGTGGGTG TGGGTGTGGTGTGTGGGTGTG GTGTGTGTGG chrIII:32-308 - 16 5.02e-10 GGTGTGTGTG TGGGTGTGGTGTGTGGGTGTG GGTGTGTGTG chrX:157474-157574 + 43 1.74e-09 GATGTATGGA TGTATAAAGTGTACGGGTGTA AACACATTGT chrXIII:650864-651111 - 43 3.04e-09 TCAAAAAAAA ACTGTGAAATGTACGGGTGTA AAACAGTCTA chrXIII:145902-146252 - 56 3.04e-09 TATGGTGTAT GGTGTATGGTGTATGGATGTA CAAAAATGCT chrXVI:866415-866755 + 46 8.28e-09 CAAATTCACA GAGGTTTGGTGTATGGGTGTA TTTCCGTTCG chrVIII:505855-506166 + 34 1.30e-08 ACAAAATGTC TGGGTGAAATGTATGGATGCA TAATTGTCTC chrVIII:382953-383318 + 9 1.61e-08 AGGATTTA TTTTCATGATGTATGGGTGTA TCGGATGTTC chrIV:1525348-1525613 + 6 1.98e-08 GGTGT GGTGTGGTGTGTGTGGGTGTG GTGTGGTGTG chrIV:221997-222299 + 30 1.98e-08 TGGTGAAATG AGATAAGGGTGTACGGGTGTG GTAACCGTCG chrIV:539039-539157 - 56 1.98e-08 GTAGAAGGAT TGAATGAGGGGTGTGGGTGTG ATAATTCATG chrV:69017-69357 + 36 3.58e-08 CGGAAGCGAA GCTTTGTGGGGTACGGGTGCA TGCTCGGCTT chrVII:10158-10498 - 50 4.31e-08 TACCTTGCAT GAGGTATGATGCACGGGTGCA CTGTTTAAAA chrVII:371282-371420 - 53 5.16e-08 CGCGTGCGGC GGTGTGAGGTGCATGGGTGCC GGTATTTTTT chrVII:726448-726745 - 40 6.16e-08 AGGGTATGGG TGTATATAGGGTATGGGTGTA CAGTTAATTT chrXV:79801-80085 + 48 8.64e-08 ATGGGTCACT TATTTAATATGTACGGGTGTT TACATGGAGT chrII:181379-181606 - 52 1.39e-07 TGTAATGTAT TCAATGTAATGTATGGGTGCT TTGTAAAGGG chrXII:710536-710876 - 76 1.62e-07 ACGC AAAATGAGATGCGTGGGTGTG ATTCCTGCTT chrXII:282525-282842 - 23 1.62e-07 AATGTACGGA GGGAAAAGATGTACAGGTGTA AAAAAGCACC chrII:89659-89942 + 44 1.88e-07 GTAAGGGTGT TAAAGAGGGTGTATGGATGTA AAGTCACAAA chrXI:382211-382405 - 46 1.88e-07 GGTTTTGTGT TGGGTGTGATGTCCGGATGCA ACAGCAGCAA chrI:81965-82247 + 47 1.88e-07 GCACCTCATC TAGCGGAGGTGCACGGATGTA CCAACAGTTT chrXI:431328-431649 - 55 1.88e-07 TGTCAAGATG TAAAAATAGTGTATGGGTGTA TTTGCGCTGT chrXII:651002-651239 - 69 2.17e-07 CAGGCGCTAC CATGAGAAATGTGTGGGTGTT GAGATAATTG chrVIII:125957-126274 - 36 2.17e-07 AAAAATGTAA AGATGTAGGTGTACGGATGCA TTAACGTCTT chrXII:932095-932486 + 12 2.50e-07 GATTTTTTTT GTGTACAGATGTACGGATGTA CGGATGTACG chrV:140458-140836 + 71 2.50e-07 GGTGTTCGGC ATTGTAAAAGGTATGGGTGCT TTGTGCGTC chrV:305775-306169 - 62 2.50e-07 GGATGTGTGG GCTTGTAAATGTGTGGGTGTA CAGTCCCGAT chrIV:125314-125654 + 37 2.87e-07 TTGTAATAAT TTGGTGCGGTGTATGGGTTCA AGTTCCCAAA chrIV:130611-130964 + 5 2.87e-07 GAAA GCTATAAAATGTGCGGATGTT TGTATATGTC chrIV:1355722-1356011 + 16 3.29e-07 ATGGAAAAAA TACTATAAATGTATGGGTGTA ATTTTAACCG chrVII:254117-254533 - 52 3.29e-07 ACCCGTGCAT ATTGAAAGATGTATGGGTTCA AAAATGTCCG chrXVI:406240-406518 - 41 3.76e-07 AAATGTTTGG AGGTGGAAAGGTACGGATGTT AAACTTCATA chrIV:229527-229793 - 19 3.76e-07 GGATGTTTTG TGTAAGATATGTATGGGTTTA AAGGAATATC chrIII:163459-163851 + 35 3.76e-07 AGAAACAGCC GCGGTTGGGTGCGTGGGTGCG GTAATTTAAC chrII:415524-415860 + 34 4.28e-07 TAATGTCTGG ATGACAAAATGCATGGGTGTA AAAAAGGAAA chrXIII:225377-225694 - 59 4.28e-07 TGGAAAATAA AAAATAGAATGTACGGATGTA ATGCACGGAT chrII:477083-477408 - 38 4.28e-07 CGCGGTCTGG GTGTATAAATGTGTGGGTGCA ACATGAATGT chrVI:221760-222069 + 49 4.87e-07 AGGAATTGGG TGTTAAAAATGTACGGGTGAA AAAAGTCTTA chrIV:1062761-1063101 + 69 4.87e-07 ATTTCCTGCC ATCATGCGATGTGTGGGTGCT ATTTATTTTC chrVI:4481-4938 - 72 4.87e-07 GTGTGGTG TGTGGGTGTGGTGTGGGTGTG GTGTGTGGGT chrXVI:378701-378974 + 21 4.87e-07 TATGTAAAAA TAGTTGAAATGTATGGGTTCA ATGAGAACTC chrXI:666465-666768 + 78 4.87e-07 GTGGTGTGGG TGTGGGTGTGGTGTGGGTGTG GT chrVII:149147-149486 + 45 4.87e-07 ATCAGTATGT ATGGGTGGGTGTATGGATGCT GTAAGCACAG chrXVI:794505-794770 - 67 5.52e-07 CTCGTCGATA ATATAAATATGTATGGGTGTT TGGAGATGTT chrIV:217181-217542 - 2 6.25e-07 GCAATATTAT AGAATAAAATGTACGGGTTCA A chrII:332338-332717 - 47 7.06e-07 ACATGTTTGG GTTTAGAATTGTATGGGTGCA GCAAGGAAAT chrXII:805538-805737 - 35 7.06e-07 AAATAATCAA AATGTGAAATGTTCGGATGTT AAGCAGGCAA chrIV:341273-341603 + 48 7.06e-07 TTAGGACTGG GTGTTAAAATGTACGGATGGA AAAGTAGACT chrXII:922170-922528 - 45 7.95e-07 CAAGACGAGA ATTGGAATATGTACGGGTGTC AATTTCAAAC chrVI:95526-95791 + 21 7.95e-07 TCTTCTATAC GCAGTCCGGTGTGTGGGTGCA TGACTGATTG chrV:110576-110782 - 48 7.95e-07 CTCCTGTTGT CTATTGAGGTGTCTGGGTGTG TTTGTCACAT chrXV:94485-94824 - 30 8.94e-07 TTTTTACCGA AGACAATAATGCATGGGTGTT AATTCTATTT chrV:423131-423442 - 35 8.94e-07 TAAGGTTGGG TGTAGAAGGTGTACGGAGGTA AATATGCAGC chrVII:352292-352632 - 42 1.00e-06 CAATCAAAAT AATATAGGGTGTATAGGTGTT CACGTATTTC chrIV:411312-411590 - 33 1.00e-06 GGGGACTTTG GGTGCCCGGGGTGTGGGTGTT TGATTTGTTT chrII:60867-61256 + 55 1.00e-06 TTTTCAAAGC AGTTGGGGGTGTACAGATGTT AATGTAGTCT chrXII:48697-49066 + 65 1.00e-06 AAGAAAAGGG TGTCTAAGATGTACGGATCTT CATTGGGATG chrX:703302-703402 + 37 1.00e-06 TTTAAAAATA AATAGTGGATGCATGGGTGCT TCCACGCGTC chrV:85163-85427 - 54 1.00e-06 GCTACGGAAT ACATCGAGGGGTATGGGTGGA TGATATCACT chrXV:216269-216628 - 60 1.12e-06 CGGTGCCTGG GTTGAGGAAGGCGCGGGTGCT CGGATGTTCC chrXII:262807-263130 - 46 1.12e-06 AAAAACAAAT TAACATAAATGTATGGATGTA TTATTAAATG chrX:75353-75453 + 40 1.26e-06 TGAGTTTTTC AAATAGTGAGGTGTGGATGTA TAGAGGAATT chrXIV:63136-63564 + 11 1.26e-06 ATGGTGTGGG TTGCTAAAATGTTCGGATGTA AAGTAGTATT chrXII:818844-819170 - 41 1.26e-06 ATAGATACAA TAATCAATATGTACGGATGTT GGAAAGGTAT chrX:607874-607974 - 39 1.40e-06 ATGTATGGGT TAAAAAGGATGTATGGATGGA GGGTTGGCAT chrIV:835813-836120 - 34 1.56e-06 CTGAGGTGTG CGGTTGCGGGGCGTGGGTGTG CGCGCCGTTG chrIV:1401270-1401576 - 59 1.56e-06 CCAAAAAAAG GGTAATATATGTGTGGGTGGA AAATGATTGG chrV:270382-270662 - 14 1.56e-06 TATAACACAT TTAGTGGTATGTATGGGTGAT AAATTTTTTT chrXV:505127-505466 - 47 1.74e-06 GGTGTGATAA GGTTCATTGTGTATGGGTTTG AAATGAATGA chrIX:254275-254513 + 7 1.74e-06 GCGCGG CAATTAGAATGTGTGGGTGCG GAAGCTCGCC chrXIII:552898-553238 - 54 1.93e-06 TGTCAAGCTT TCTATGAGATGTATGGGTCTC ATGAATAACG chrXIV:444494-444760 + 37 1.93e-06 TAATGTACGG ATTTAAAGAGGTACGGATGGA GACCGTAGAA chrXIII:924168-924408 + 58 2.14e-06 AGGGTTAGGG TAGTGTTAGGGTGTGGGTGTG GTGTGTGTGT chrIII:178349-178658 + 12 2.14e-06 AAAAAAAAGA GTAGTAAAATGTACAGATGTT TATTAAGTCC chrVII:788336-788724 + 42 2.37e-06 AGTGATTGGG TTTAGAGTATGCACGGATGTT GTAAGGAATA chrXIII:124359-124682 + 36 2.37e-06 AATCCATACA TTTTAATAATGTACGGATTTA ATAGCAGTCT chrXIII:754434-754777 + 10 2.37e-06 TAAAAACGC TATTCTGGATGTATGGGGGTA TTTTATGTTT chrXIV:495239-495558 + 40 2.37e-06 GAGGTTTGGG TGTGTATAGTGTACGGATTGA ATATGTCAAG chrVIII:36130-36364 + 50 2.62e-06 AAATCTGATG GCCTAGATATGTTTGGGTGTT TTCTTCATAA chrXV:1025759-1026008 - 42 2.62e-06 GATGTCCAAT TACACGTGATGAATGGGTGTT CAGCATATGT chrXVI:731971-732290 - 23 2.62e-06 AACATCCAAC CATCCTAAAGGTATGGGTGTA CTGACGATGC chrII:604154-604449 - 49 2.89e-06 GTTTTGCGAA TATGAAAAATGTACAGATGTG TAAATGTACG chrVI:223924-224158 + 59 2.89e-06 CTGTATGGGT CTAAGAGTATGTACGGATGTA AAAGAAAACA chrXV:968162-968343 + 60 3.18e-06 GGATCTCAAA AGCGTGGGGTGCGTGGGCGTG CGCTGCTCGA chrIX:257389-257675 - 22 3.18e-06 GTCGTCACAT ACCGTGTGTTGTTTGGGTGTT TTCCTTTCAG chrVII:648956-649359 + 35 3.18e-06 GTAATGTATG GGTTCTCGTTGTACGGATGTT TAAAATGTCC chrXI:108743-109068 - 65 3.18e-06 AAAAATGGAG CCAACTAAATGTACGGATGTT GTAATGTGTT chrIX:316150-316558 - 47 3.50e-06 GTCTGGGTTT GTAAAATAATGTATGGGTTCT AGTCTGAAAA chrIV:117163-117551 - 62 3.50e-06 AAAGTTATGG GTGTAGATATGTATGGGTCTG AGATTAATAC chrX:73391-73491 - 28 3.50e-06 CATATTCTTT TCAGTGTGGTGCAAGGATGTA CAATGATGTG chrVII:555354-555664 - 50 3.50e-06 TAAACCCAAA CACCTTTAATGCACGGGTGTA AAAGGGATGT chrXV:866590-866900 + 54 3.50e-06 CATCCAAGCA TTCTGGGTTTGTATGGGTGTT ACACCGGTTT chrXVI:76390-76692 + 45 3.85e-06 AACCCAACAC ATCCGTGGATGTACGGGTGAA AATACAGTCA chrXI:618826-619185 + 49 4.23e-06 ACTACACAAA TCTATTAGAGGCACGGATGGA AATAGTATTT chrV:53562-53915 + 40 4.23e-06 GACACCCACA CATATTTGGTGTTCGGATGTT AAACAGGGTA chrXV:167975-168421 + 33 4.23e-06 CTTGGTAAAC TTAAATATAGGCACGGGTGTT TAAAGCCGCC chrXIV:330831-331093 - 37 5.07e-06 GTCTAGGTTT TACTTTAGATGTAAGGATGTA AGATCTCTGA chrVII:856795-856941 + 39 5.55e-06 GCTAGTTCCA TTGGTGCGGTGTATGGGCGGG TACCCTCAAA chrVII:310517-310848 - 53 6.06e-06 GTAATGTGTG GGTCCCTGGTGTACAGATGTT ACATTGGTTA chrXVI:699976-700352 - 19 6.06e-06 TGTGGGGGAT TGGGTGTGATGTAAGGATTCG CGGTCCTCGA chrIV:321696-321947 - 27 6.61e-06 GGGTAAAAAT AAAGATTGGTGTACGGAGGTA AAGGTATGAA chrVII:228551-228716 - 45 6.61e-06 TAAGACTGTT TTCCAGAAATGTTTGGGTTTA TTTTTTAATT chrVII:919970-920182 - 45 6.61e-06 ATGTCTGGGT TTTTTAATATGTTTGGGTTTT TATCATATTT chrV:362189-362464 - 73 7.83e-06 AAATATT GAAATATATTGTATGGGTTTA AATTTCTTGG chrXIII:551390-551772 + 5 7.83e-06 TATG GGTGCGTAATGTACAGATTTT ATGGCACTGA chrVIII:148965-149258 + 14 7.83e-06 TTTCTTTATA ATCCAATGGTGCATGGGTGAA AATGTATGGG chrXVI:188664-188907 - 54 8.51e-06 TGGTAACCAT AGTAACCGATGCATGGGTTTT AAAAGTCACG chrIV:579073-579404 - 37 1.00e-05 CGTAAAATTT TTTTAAAAATGTTTGGGTCTA CTTTATGGTT chrXI:313346-313634 - 55 1.09e-05 TAATATTTAT TCAACCAGATGTGCAGATGTA ACCAAAAACT chrXI:67783-68039 - 51 1.09e-05 CCGAGAAAAT TTGATGCGGTGCACGGATTTC AGCACGGGTT chrX:90092-90192 - 47 1.09e-05 GGCCATGTAT GGGTGAGAATGTCCAGGTGCA AATTGAAAAG chrXIV:241412-241691 - 61 1.09e-05 TTAAAACGTG TATTGATGGTGTTTAGGTGCT GGATGTTGGG chrII:167876-168187 - 53 1.17e-05 GAGGTACTGG TGAAAAATATGTCTGGGTTTT AAAACACTGT chrXII:837834-838094 + 13 1.48e-05 GAAAAACAGG GCTTCCTAGTGTACAGATGTA TGTCGGATGA chrIX:99664-100001 + 39 1.72e-05 ATGTACTGGT GTTACATGGTGTACCGATGCT TTAATTGCAC chrXV:883964-884304 - 75 1.85e-05 GAATC GTATTTAGATGTACGTATGTG TTACGTAATG chrX:651262-651362 - 72 1.98e-05 TAAACTTG AGACAAATATGTATGGGTTAA GAATAATTAT chrVIII:548540-548880 + 49 2.13e-05 AGGTGAGGTT AACATTGGTGGTACGGGTTTT CCGTTTACTG chrIV:490949-491262 - 75 2.45e-05 TGTTT TTTCCTGAATGATTGGGTGTA ATAAAATAGG chrXI:158239-158592 - 55 2.81e-05 AAAACAAAAT ATGCTGTTATGTACAGATTTA TTTCCAGTGT chrXV:281987-282343 + 11 3.00e-05 TATATATCGC TTAAATAGAGGAGTGGATGCT CAGGATAACA chrXV:978850-979107 + 3 3.21e-05 AT ACACAAGGATGAATGGGTTCT ACGACACCGC chrXII:1019021-1019344 + 4 5.29e-05 AAA ATATATTAATGTTTGGGTTTC AACGTTTCCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DDDDWDWRRTGTAYGGRTGTW MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:1064908-1065331 3.5e-10 16_[+3]_63 chrXII:5499-5864 5e-10 33_[-3]_46 chrVIII:562317-562607 5e-10 46_[+3]_33 chrXII:11106-11488 5e-10 20_[-3]_59 chrIII:32-308 5e-10 15_[-3]_64 chrX:157474-157574 1.7e-09 42_[+3]_37 chrXIII:650864-651111 3e-09 42_[-3]_37 chrXIII:145902-146252 3e-09 55_[-3]_24 chrXVI:866415-866755 8.3e-09 45_[+3]_34 chrVIII:505855-506166 1.3e-08 33_[+3]_46 chrVIII:382953-383318 1.6e-08 8_[+3]_71 chrIV:1525348-1525613 2e-08 5_[+3]_74 chrIV:221997-222299 2e-08 29_[+3]_50 chrIV:539039-539157 2e-08 55_[-3]_24 chrV:69017-69357 3.6e-08 35_[+3]_44 chrVII:10158-10498 4.3e-08 49_[-3]_30 chrVII:371282-371420 5.2e-08 52_[-3]_27 chrVII:726448-726745 6.2e-08 39_[-3]_40 chrXV:79801-80085 8.6e-08 47_[+3]_32 chrII:181379-181606 1.4e-07 51_[-3]_28 chrXII:710536-710876 1.6e-07 75_[-3]_4 chrXII:282525-282842 1.6e-07 22_[-3]_57 chrII:89659-89942 1.9e-07 43_[+3]_36 chrXI:382211-382405 1.9e-07 45_[-3]_34 chrI:81965-82247 1.9e-07 46_[+3]_33 chrXI:431328-431649 1.9e-07 54_[-3]_25 chrXII:651002-651239 2.2e-07 68_[-3]_11 chrVIII:125957-126274 2.2e-07 35_[-3]_44 chrXII:932095-932486 2.5e-07 11_[+3]_68 chrV:140458-140836 2.5e-07 70_[+3]_9 chrV:305775-306169 2.5e-07 61_[-3]_18 chrIV:125314-125654 2.9e-07 36_[+3]_43 chrIV:130611-130964 2.9e-07 4_[+3]_75 chrIV:1355722-1356011 3.3e-07 15_[+3]_64 chrVII:254117-254533 3.3e-07 51_[-3]_28 chrXVI:406240-406518 3.8e-07 40_[-3]_39 chrIV:229527-229793 3.8e-07 18_[-3]_61 chrIII:163459-163851 3.8e-07 34_[+3]_45 chrII:415524-415860 4.3e-07 33_[+3]_46 chrXIII:225377-225694 4.3e-07 58_[-3]_21 chrII:477083-477408 4.3e-07 37_[-3]_42 chrVI:221760-222069 4.9e-07 48_[+3]_31 chrIV:1062761-1063101 4.9e-07 68_[+3]_11 chrVI:4481-4938 4.9e-07 71_[-3]_8 chrXVI:378701-378974 4.9e-07 20_[+3]_59 chrXI:666465-666768 4.9e-07 77_[+3]_2 chrVII:149147-149486 4.9e-07 44_[+3]_35 chrXVI:794505-794770 5.5e-07 66_[-3]_13 chrIV:217181-217542 6.3e-07 1_[-3]_78 chrII:332338-332717 7.1e-07 46_[-3]_33 chrXII:805538-805737 7.1e-07 34_[-3]_45 chrIV:341273-341603 7.1e-07 47_[+3]_32 chrXII:922170-922528 7.9e-07 44_[-3]_35 chrVI:95526-95791 7.9e-07 20_[+3]_59 chrV:110576-110782 7.9e-07 47_[-3]_32 chrXV:94485-94824 8.9e-07 29_[-3]_50 chrV:423131-423442 8.9e-07 34_[-3]_45 chrVII:352292-352632 1e-06 41_[-3]_38 chrIV:411312-411590 1e-06 32_[-3]_47 chrII:60867-61256 1e-06 54_[+3]_25 chrXII:48697-49066 1e-06 64_[+3]_15 chrX:703302-703402 1e-06 36_[+3]_43 chrV:85163-85427 1e-06 53_[-3]_26 chrXV:216269-216628 1.1e-06 59_[-3]_20 chrXII:262807-263130 1.1e-06 45_[-3]_34 chrX:75353-75453 1.3e-06 39_[+3]_40 chrXIV:63136-63564 1.3e-06 10_[+3]_69 chrXII:818844-819170 1.3e-06 40_[-3]_39 chrX:607874-607974 1.4e-06 38_[-3]_41 chrIV:835813-836120 1.6e-06 33_[-3]_46 chrIV:1401270-1401576 1.6e-06 58_[-3]_21 chrV:270382-270662 1.6e-06 13_[-3]_66 chrXV:505127-505466 1.7e-06 46_[-3]_33 chrIX:254275-254513 1.7e-06 6_[+3]_73 chrXIII:552898-553238 1.9e-06 53_[-3]_26 chrXIV:444494-444760 1.9e-06 36_[+3]_43 chrXIII:924168-924408 2.1e-06 57_[+3]_22 chrIII:178349-178658 2.1e-06 11_[+3]_68 chrVII:788336-788724 2.4e-06 41_[+3]_38 chrXIII:124359-124682 2.4e-06 35_[+3]_44 chrXIII:754434-754777 2.4e-06 9_[+3]_70 chrXIV:495239-495558 2.4e-06 39_[+3]_40 chrVIII:36130-36364 2.6e-06 49_[+3]_30 chrXV:1025759-1026008 2.6e-06 41_[-3]_38 chrXVI:731971-732290 2.6e-06 22_[-3]_57 chrII:604154-604449 2.9e-06 48_[-3]_31 chrVI:223924-224158 2.9e-06 58_[+3]_21 chrXV:968162-968343 3.2e-06 59_[+3]_20 chrIX:257389-257675 3.2e-06 21_[-3]_58 chrVII:648956-649359 3.2e-06 34_[+3]_45 chrXI:108743-109068 3.2e-06 64_[-3]_15 chrIX:316150-316558 3.5e-06 46_[-3]_33 chrIV:117163-117551 3.5e-06 61_[-3]_18 chrX:73391-73491 3.5e-06 27_[-3]_52 chrVII:555354-555664 3.5e-06 49_[-3]_30 chrXV:866590-866900 3.5e-06 53_[+3]_26 chrXVI:76390-76692 3.9e-06 44_[+3]_35 chrXI:618826-619185 4.2e-06 48_[+3]_31 chrV:53562-53915 4.2e-06 39_[+3]_40 chrXV:167975-168421 4.2e-06 32_[+3]_47 chrXIV:330831-331093 5.1e-06 36_[-3]_43 chrVII:856795-856941 5.5e-06 38_[+3]_41 chrVII:310517-310848 6.1e-06 52_[-3]_27 chrXVI:699976-700352 6.1e-06 18_[-3]_61 chrIV:321696-321947 6.6e-06 26_[-3]_53 chrVII:228551-228716 6.6e-06 44_[-3]_35 chrVII:919970-920182 6.6e-06 44_[-3]_35 chrV:362189-362464 7.8e-06 72_[-3]_7 chrXIII:551390-551772 7.8e-06 4_[+3]_75 chrVIII:148965-149258 7.8e-06 13_[+3]_66 chrXVI:188664-188907 8.5e-06 53_[-3]_26 chrIV:579073-579404 1e-05 36_[-3]_43 chrXI:313346-313634 1.1e-05 54_[-3]_25 chrXI:67783-68039 1.1e-05 50_[-3]_29 chrX:90092-90192 1.1e-05 46_[-3]_33 chrXIV:241412-241691 1.1e-05 60_[-3]_19 chrII:167876-168187 1.2e-05 52_[-3]_27 chrXII:837834-838094 1.5e-05 12_[+3]_67 chrIX:99664-100001 1.7e-05 38_[+3]_41 chrXV:883964-884304 1.8e-05 74_[-3]_5 chrX:651262-651362 2e-05 71_[-3]_8 chrVIII:548540-548880 2.1e-05 48_[+3]_31 chrIV:490949-491262 2.5e-05 74_[-3]_5 chrXI:158239-158592 2.8e-05 54_[-3]_25 chrXV:281987-282343 3e-05 10_[+3]_69 chrXV:978850-979107 3.2e-05 2_[+3]_77 chrXII:1019021-1019344 5.3e-05 3_[+3]_76 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DDDDWDWRRTGTAYGGRTGTW MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF DDDDWDWRRTGTAYGGRTGTW width=21 seqs=127 chrXII:1064908-1065331 ( 17) TGTGTGTGGTGTGTGGGTGTG 1 chrXII:5499-5864 ( 34) TGGGTGTGGTGTGTGGGTGTG 1 chrVIII:562317-562607 ( 47) TGGGTGTGGTGTGTGGGTGTG 1 chrXII:11106-11488 ( 21) TGGGTGTGGTGTGTGGGTGTG 1 chrIII:32-308 ( 16) TGGGTGTGGTGTGTGGGTGTG 1 chrX:157474-157574 ( 43) TGTATAAAGTGTACGGGTGTA 1 chrXIII:650864-651111 ( 43) ACTGTGAAATGTACGGGTGTA 1 chrXIII:145902-146252 ( 56) GGTGTATGGTGTATGGATGTA 1 chrXVI:866415-866755 ( 46) GAGGTTTGGTGTATGGGTGTA 1 chrVIII:505855-506166 ( 34) TGGGTGAAATGTATGGATGCA 1 chrVIII:382953-383318 ( 9) TTTTCATGATGTATGGGTGTA 1 chrIV:1525348-1525613 ( 6) GGTGTGGTGTGTGTGGGTGTG 1 chrIV:221997-222299 ( 30) AGATAAGGGTGTACGGGTGTG 1 chrIV:539039-539157 ( 56) TGAATGAGGGGTGTGGGTGTG 1 chrV:69017-69357 ( 36) GCTTTGTGGGGTACGGGTGCA 1 chrVII:10158-10498 ( 50) GAGGTATGATGCACGGGTGCA 1 chrVII:371282-371420 ( 53) GGTGTGAGGTGCATGGGTGCC 1 chrVII:726448-726745 ( 40) TGTATATAGGGTATGGGTGTA 1 chrXV:79801-80085 ( 48) TATTTAATATGTACGGGTGTT 1 chrII:181379-181606 ( 52) TCAATGTAATGTATGGGTGCT 1 chrXII:710536-710876 ( 76) AAAATGAGATGCGTGGGTGTG 1 chrXII:282525-282842 ( 23) GGGAAAAGATGTACAGGTGTA 1 chrII:89659-89942 ( 44) TAAAGAGGGTGTATGGATGTA 1 chrXI:382211-382405 ( 46) TGGGTGTGATGTCCGGATGCA 1 chrI:81965-82247 ( 47) TAGCGGAGGTGCACGGATGTA 1 chrXI:431328-431649 ( 55) TAAAAATAGTGTATGGGTGTA 1 chrXII:651002-651239 ( 69) CATGAGAAATGTGTGGGTGTT 1 chrVIII:125957-126274 ( 36) AGATGTAGGTGTACGGATGCA 1 chrXII:932095-932486 ( 12) GTGTACAGATGTACGGATGTA 1 chrV:140458-140836 ( 71) ATTGTAAAAGGTATGGGTGCT 1 chrV:305775-306169 ( 62) GCTTGTAAATGTGTGGGTGTA 1 chrIV:125314-125654 ( 37) TTGGTGCGGTGTATGGGTTCA 1 chrIV:130611-130964 ( 5) GCTATAAAATGTGCGGATGTT 1 chrIV:1355722-1356011 ( 16) TACTATAAATGTATGGGTGTA 1 chrVII:254117-254533 ( 52) ATTGAAAGATGTATGGGTTCA 1 chrXVI:406240-406518 ( 41) AGGTGGAAAGGTACGGATGTT 1 chrIV:229527-229793 ( 19) TGTAAGATATGTATGGGTTTA 1 chrIII:163459-163851 ( 35) GCGGTTGGGTGCGTGGGTGCG 1 chrII:415524-415860 ( 34) ATGACAAAATGCATGGGTGTA 1 chrXIII:225377-225694 ( 59) AAAATAGAATGTACGGATGTA 1 chrII:477083-477408 ( 38) GTGTATAAATGTGTGGGTGCA 1 chrVI:221760-222069 ( 49) TGTTAAAAATGTACGGGTGAA 1 chrIV:1062761-1063101 ( 69) ATCATGCGATGTGTGGGTGCT 1 chrVI:4481-4938 ( 72) TGTGGGTGTGGTGTGGGTGTG 1 chrXVI:378701-378974 ( 21) TAGTTGAAATGTATGGGTTCA 1 chrXI:666465-666768 ( 78) TGTGGGTGTGGTGTGGGTGTG 1 chrVII:149147-149486 ( 45) ATGGGTGGGTGTATGGATGCT 1 chrXVI:794505-794770 ( 67) ATATAAATATGTATGGGTGTT 1 chrIV:217181-217542 ( 2) AGAATAAAATGTACGGGTTCA 1 chrII:332338-332717 ( 47) GTTTAGAATTGTATGGGTGCA 1 chrXII:805538-805737 ( 35) AATGTGAAATGTTCGGATGTT 1 chrIV:341273-341603 ( 48) GTGTTAAAATGTACGGATGGA 1 chrXII:922170-922528 ( 45) ATTGGAATATGTACGGGTGTC 1 chrVI:95526-95791 ( 21) GCAGTCCGGTGTGTGGGTGCA 1 chrV:110576-110782 ( 48) CTATTGAGGTGTCTGGGTGTG 1 chrXV:94485-94824 ( 30) AGACAATAATGCATGGGTGTT 1 chrV:423131-423442 ( 35) TGTAGAAGGTGTACGGAGGTA 1 chrVII:352292-352632 ( 42) AATATAGGGTGTATAGGTGTT 1 chrIV:411312-411590 ( 33) GGTGCCCGGGGTGTGGGTGTT 1 chrII:60867-61256 ( 55) AGTTGGGGGTGTACAGATGTT 1 chrXII:48697-49066 ( 65) TGTCTAAGATGTACGGATCTT 1 chrX:703302-703402 ( 37) AATAGTGGATGCATGGGTGCT 1 chrV:85163-85427 ( 54) ACATCGAGGGGTATGGGTGGA 1 chrXV:216269-216628 ( 60) GTTGAGGAAGGCGCGGGTGCT 1 chrXII:262807-263130 ( 46) TAACATAAATGTATGGATGTA 1 chrX:75353-75453 ( 40) AAATAGTGAGGTGTGGATGTA 1 chrXIV:63136-63564 ( 11) TTGCTAAAATGTTCGGATGTA 1 chrXII:818844-819170 ( 41) TAATCAATATGTACGGATGTT 1 chrX:607874-607974 ( 39) TAAAAAGGATGTATGGATGGA 1 chrIV:835813-836120 ( 34) CGGTTGCGGGGCGTGGGTGTG 1 chrIV:1401270-1401576 ( 59) GGTAATATATGTGTGGGTGGA 1 chrV:270382-270662 ( 14) TTAGTGGTATGTATGGGTGAT 1 chrXV:505127-505466 ( 47) GGTTCATTGTGTATGGGTTTG 1 chrIX:254275-254513 ( 7) CAATTAGAATGTGTGGGTGCG 1 chrXIII:552898-553238 ( 54) TCTATGAGATGTATGGGTCTC 1 chrXIV:444494-444760 ( 37) ATTTAAAGAGGTACGGATGGA 1 chrXIII:924168-924408 ( 58) TAGTGTTAGGGTGTGGGTGTG 1 chrIII:178349-178658 ( 12) GTAGTAAAATGTACAGATGTT 1 chrVII:788336-788724 ( 42) TTTAGAGTATGCACGGATGTT 1 chrXIII:124359-124682 ( 36) TTTTAATAATGTACGGATTTA 1 chrXIII:754434-754777 ( 10) TATTCTGGATGTATGGGGGTA 1 chrXIV:495239-495558 ( 40) TGTGTATAGTGTACGGATTGA 1 chrVIII:36130-36364 ( 50) GCCTAGATATGTTTGGGTGTT 1 chrXV:1025759-1026008 ( 42) TACACGTGATGAATGGGTGTT 1 chrXVI:731971-732290 ( 23) CATCCTAAAGGTATGGGTGTA 1 chrII:604154-604449 ( 49) TATGAAAAATGTACAGATGTG 1 chrVI:223924-224158 ( 59) CTAAGAGTATGTACGGATGTA 1 chrXV:968162-968343 ( 60) AGCGTGGGGTGCGTGGGCGTG 1 chrIX:257389-257675 ( 22) ACCGTGTGTTGTTTGGGTGTT 1 chrVII:648956-649359 ( 35) GGTTCTCGTTGTACGGATGTT 1 chrXI:108743-109068 ( 65) CCAACTAAATGTACGGATGTT 1 chrIX:316150-316558 ( 47) GTAAAATAATGTATGGGTTCT 1 chrIV:117163-117551 ( 62) GTGTAGATATGTATGGGTCTG 1 chrX:73391-73491 ( 28) TCAGTGTGGTGCAAGGATGTA 1 chrVII:555354-555664 ( 50) CACCTTTAATGCACGGGTGTA 1 chrXV:866590-866900 ( 54) TTCTGGGTTTGTATGGGTGTT 1 chrXVI:76390-76692 ( 45) ATCCGTGGATGTACGGGTGAA 1 chrXI:618826-619185 ( 49) TCTATTAGAGGCACGGATGGA 1 chrV:53562-53915 ( 40) CATATTTGGTGTTCGGATGTT 1 chrXV:167975-168421 ( 33) TTAAATATAGGCACGGGTGTT 1 chrXIV:330831-331093 ( 37) TACTTTAGATGTAAGGATGTA 1 chrVII:856795-856941 ( 39) TTGGTGCGGTGTATGGGCGGG 1 chrVII:310517-310848 ( 53) GGTCCCTGGTGTACAGATGTT 1 chrXVI:699976-700352 ( 19) TGGGTGTGATGTAAGGATTCG 1 chrIV:321696-321947 ( 27) AAAGATTGGTGTACGGAGGTA 1 chrVII:228551-228716 ( 45) TTCCAGAAATGTTTGGGTTTA 1 chrVII:919970-920182 ( 45) TTTTTAATATGTTTGGGTTTT 1 chrV:362189-362464 ( 73) GAAATATATTGTATGGGTTTA 1 chrXIII:551390-551772 ( 5) GGTGCGTAATGTACAGATTTT 1 chrVIII:148965-149258 ( 14) ATCCAATGGTGCATGGGTGAA 1 chrXVI:188664-188907 ( 54) AGTAACCGATGCATGGGTTTT 1 chrIV:579073-579404 ( 37) TTTTAAAAATGTTTGGGTCTA 1 chrXI:313346-313634 ( 55) TCAACCAGATGTGCAGATGTA 1 chrXI:67783-68039 ( 51) TTGATGCGGTGCACGGATTTC 1 chrX:90092-90192 ( 47) GGGTGAGAATGTCCAGGTGCA 1 chrXIV:241412-241691 ( 61) TATTGATGGTGTTTAGGTGCT 1 chrII:167876-168187 ( 53) TGAAAAATATGTCTGGGTTTT 1 chrXII:837834-838094 ( 13) GCTTCCTAGTGTACAGATGTA 1 chrIX:99664-100001 ( 39) GTTACATGGTGTACCGATGCT 1 chrXV:883964-884304 ( 75) GTATTTAGATGTACGTATGTG 1 chrX:651262-651362 ( 72) AGACAAATATGTATGGGTTAA 1 chrVIII:548540-548880 ( 49) AACATTGGTGGTACGGGTTTT 1 chrIV:490949-491262 ( 75) TTTCCTGAATGATTGGGTGTA 1 chrXI:158239-158592 ( 55) ATGCTGTTATGTACAGATTTA 1 chrXV:281987-282343 ( 11) TTAAATAGAGGAGTGGATGCT 1 chrXV:978850-979107 ( 3) ACACAAGGATGAATGGGTTCT 1 chrXII:1019021-1019344 ( 4) ATATATTAATGTTTGGGTTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DDDDWDWRRTGTAYGGRTGTW MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47465 bayes= 9.27297 E= 1.1e-179 -30 -134 44 41 -39 -43 81 -6 -22 -81 29 33 -18 -61 70 -6 -22 -43 -27 46 21 -171 101 -59 46 -134 1 -6 8 -1363 151 -110 90 -1363 91 -234 -1363 -1363 -27 141 -1363 -1363 247 -1363 -334 -27 -1363 136 106 -251 24 -189 -376 113 -1363 86 -176 -451 232 -1363 -1363 -1363 246 -534 15 -1363 184 -1363 -1363 -351 -293 159 -1363 -251 214 -89 -302 29 -151 108 54 -219 1 -2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DDDDWDWRRTGTAYGGRTGTW MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 127 E= 1.1e-179 0.259843 0.070866 0.244094 0.425197 0.244094 0.133858 0.314961 0.307087 0.275591 0.102362 0.220472 0.401575 0.283465 0.118110 0.291339 0.307087 0.275591 0.133858 0.149606 0.440945 0.370079 0.055118 0.362205 0.212598 0.440945 0.070866 0.181102 0.307087 0.338583 0.000000 0.511811 0.149606 0.598425 0.000000 0.338583 0.062992 0.000000 0.000000 0.149606 0.850394 0.000000 0.000000 1.000000 0.000000 0.031496 0.149606 0.000000 0.818898 0.669291 0.031496 0.212598 0.086614 0.023622 0.393701 0.000000 0.582677 0.094488 0.007874 0.897638 0.000000 0.000000 0.000000 0.992126 0.007874 0.354331 0.000000 0.645669 0.000000 0.000000 0.015748 0.023622 0.960630 0.000000 0.031496 0.795276 0.173228 0.039370 0.220472 0.062992 0.677165 0.464567 0.039370 0.181102 0.314961 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DDDDWDWRRTGTAYGGRTGTW MEME-3 regular expression -------------------------------------------------------------------------------- [TAG][GTA][TAG][TGA][TA][AGT][AT][GA][AG]TGT[AG][TC]GG[GA]TG[TC][AT] -------------------------------------------------------------------------------- Time 959.31 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:495239-495558 3.60e-03 22_[+3(1.26e-06)]_57 chrX:517741-517841 6.10e-04 15_[+1(2.17e-07)]_64 chrXIII:550803-551143 7.04e-01 100 chrXVI:581907-582202 8.54e-07 20_[+3(6.68e-05)]_21_[-1(1.05e-08)]_\ 17 chrV:110576-110782 1.10e-03 47_[-3(7.95e-07)]_32 chrVII:254117-254533 6.88e-04 51_[-3(3.29e-07)]_28 chrXII:366092-366443 7.26e-02 64_[+2(5.07e-05)]_7 chrXV:506076-506416 1.34e-01 100 chrIV:974310-974650 1.67e-01 100 chrVI:223924-224158 4.73e-03 58_[+3(2.89e-06)]_21 chrVII:736176-736529 1.70e-11 42_[-1(1.99e-06)]_7_[-2(8.85e-13)]_\ 1 chrVII:311261-311513 9.73e-01 100 chrVII:878644-878974 1.16e-03 30_[+1(1.38e-06)]_49 chrXV:866590-866900 1.80e-03 53_[+3(3.50e-06)]_26 chrVIII:381359-381699 9.65e-01 100 chrVII:930818-931216 8.30e-04 30_[+1(1.04e-06)]_13_[-1(5.90e-05)]_\ 15 chrIV:1490081-1490421 3.81e-01 100 chrXII:592404-592784 4.40e-06 49_[+1(9.74e-10)]_30 chrVII:439125-439465 5.51e-01 100 chrX:415860-415960 2.32e-04 20_[+1(1.38e-06)]_59 chrI:141703-141814 9.40e-01 100 chrV:61671-62131 2.86e-09 48_[+2(3.23e-12)]_23 chrIII:163459-163851 4.91e-04 34_[+3(3.76e-07)]_9_[+3(1.17e-05)]_\ 15 chrXV:796991-797331 7.51e-01 100 chrXIV:64520-64860 8.87e-01 100 chrIV:980966-981226 7.96e-01 100 chrVI:233639-233979 7.26e-01 100 chrXIV:575501-575641 1.93e-01 100 chrVII:857319-857626 6.02e-04 43_[+1(2.17e-07)]_36 chrIX:317850-318190 9.73e-01 100 chrXII:924409-924749 1.40e-01 45_[+3(6.31e-05)]_34 chrXV:594280-594596 2.73e-03 11_[+1(2.37e-06)]_68 chrV:52155-52495 7.41e-01 100 chrXVI:731971-732290 1.10e-03 22_[-3(2.62e-06)]_57 chrVIII:466806-467119 7.30e-01 100 chrXII:357235-357575 7.87e-01 100 chrXIII:572791-573123 4.37e-03 22_[+1(1.15e-06)]_57 chrVII:480307-480647 7.95e-01 100 chrXVI:572081-572478 3.63e-12 44_[-1(1.04e-06)]_6_[-2(3.23e-12)] chrXII:794417-794800 9.48e-01 100 chrXV:167975-168421 6.91e-03 32_[+3(4.23e-06)]_4_[-3(2.81e-05)]_\ 22 chrXIV:499376-499578 1.56e-01 100 chrX:378199-378299 3.15e-05 59_[-1(2.52e-08)]_20 chrXIII:420507-420827 1.83e-05 18_[+1(2.52e-08)]_61 chrXV:160421-160761 4.43e-01 100 chrX:139813-139913 9.37e-01 100 chrXV:431892-432232 3.91e-01 100 chrXI:612357-612697 9.91e-01 100 chrVII:149147-149486 8.20e-04 44_[+3(4.87e-07)]_35 chrV:138500-138965 2.50e-08 16_[-2(8.85e-13)]_55 chrVII:533989-534095 5.61e-01 100 chrIII:32-308 1.21e-08 1_[-3(8.80e-05)]_23_[-3(1.98e-08)]_\ 10_[-3(1.74e-06)]_3 chrXVI:412334-412674 9.54e-01 100 chrXII:441307-441647 9.33e-01 100 chrVI:204857-205135 7.91e-08 24_[+1(2.39e-10)]_55 chrVII:727841-728041 2.16e-01 100 chrXII:975923-976201 1.03e-04 18_[+1(3.32e-08)]_61 chrXVI:794505-794770 1.57e-03 48_[-3(3.76e-07)]_31 chrIV:1357630-1357970 3.19e-01 100 chrIV:488573-489024 4.56e-06 58_[+2(5.93e-10)]_13 chrIV:1013761-1013909 6.23e-02 63_[-3(8.34e-05)]_16 chrII:375539-375879 7.62e-01 100 chrIII:292775-292937 9.77e-01 100 chrXII:837834-838094 2.59e-02 12_[+3(1.48e-05)]_67 chrV:487191-487555 1.37e-08 17_[+2(3.71e-12)]_54 chrVIII:132916-133308 9.35e-08 19_[+1(2.15e-11)]_60 chrVIII:358345-358747 1.24e-03 47_[+1(5.18e-07)]_32 chrIV:492291-492631 4.67e-01 100 chrXIII:549949-550289 9.90e-01 100 chrXI:158239-158592 5.02e-02 33_[-3(2.13e-05)]_[-3(2.81e-05)]_25 chrIII:30506-30846 5.64e-01 100 chrIV:884201-884494 2.11e-05 68_[-1(3.32e-08)]_11 chrVII:365045-365229 9.66e-01 100 chrXIII:145902-146252 3.81e-06 55_[-3(3.04e-09)]_24 chrX:156793-156893 9.54e-01 100 chrX:651262-651362 2.16e-03 43_[+1(9.91e-05)]_7_[-3(1.98e-05)]_\ 8 chrV:250134-250507 1.02e-10 20_[-1(9.73e-06)]_7_[-2(1.94e-11)]_\ 23 chrXII:369904-370244 7.93e-01 100 chrVI:157760-158174 1.75e-09 8_[+2(7.08e-10)]_27_[+1(5.18e-07)]_\ 15 chrXV:445876-446052 4.44e-01 100 chrV:423131-423442 1.79e-03 34_[-3(8.94e-07)]_45 chrI:151407-151747 4.66e-01 100 chrXII:167899-168194 4.81e-08 3_[+1(2.15e-11)]_76 chrXIII:888629-888969 5.93e-01 100 chrV:311964-312255 1.89e-06 10_[+1(1.69e-09)]_69 chrXV:832419-832759 8.54e-01 100 chrV:305775-306169 2.90e-04 61_[-3(2.50e-07)]_18 chrVII:364048-364388 7.26e-01 100 chrII:232361-232701 7.04e-01 100 chrIV:1352374-1352711 4.33e-05 20_[+1(1.05e-08)]_59 chrV:270382-270662 8.51e-03 13_[-3(1.56e-06)]_18_[-3(1.98e-05)]_\ 27 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chrIV:1401270-1401576 2.19e-03 58_[-3(1.56e-06)]_21 chrXV:710022-710357 1.43e-03 66_[-1(2.17e-07)]_13 chrXV:602-794 9.45e-01 100 chrIV:509143-509483 9.99e-01 100 chrXI:302722-303140 9.78e-04 41_[-1(1.38e-06)]_38 chrXIII:923584-923771 5.11e-01 100 chrXIII:837764-838059 2.32e-03 71_[-1(1.52e-06)]_8 chrXVI:880160-880521 5.81e-15 15_[+2(2.93e-13)]_9_[+1(1.41e-09)]_\ 26 chrXVI:276466-276806 8.31e-01 100 chrXVI:689390-689748 1.51e-06 50_[-1(2.39e-10)]_29 chrXII:199310-199545 1.74e-01 100 chrXIII:892424-892764 7.52e-01 100 chrVII:661576-661890 4.64e-03 70_[-1(1.38e-06)]_9 chrIV:491512-491852 8.37e-01 100 chrX:663782-663882 5.06e-01 100 chrIII:162428-162768 7.31e-01 100 chrXI:67783-68039 6.40e-03 50_[-3(1.09e-05)]_29 chrXII:797006-797369 4.56e-01 100 chrIV:591663-591887 7.74e-01 100 chrXVI:866415-866755 1.78e-05 45_[+3(8.28e-09)]_34 chrVII:437164-437504 5.71e-01 100 chrIV:221997-222299 6.44e-06 29_[+3(1.98e-08)]_50 chrVII:774171-774519 5.75e-07 58_[-1(2.39e-10)]_21 chrV:61205-61319 3.60e-01 100 chrXIV:63136-63564 1.39e-03 10_[+3(1.26e-06)]_69 chrIX:257389-257675 1.11e-02 21_[-3(3.18e-06)]_7_[-3(1.17e-05)]_\ 30 chrII:256534-256874 8.66e-01 100 chrXIII:25173-25513 5.76e-01 100 chrII:296177-296517 4.54e-01 100 chrVI:5438-5778 7.65e-01 100 chrV:85163-85427 2.65e-03 24_[-3(2.13e-05)]_8_[-3(1.00e-06)]_\ 26 chrXI:219734-220019 4.04e-07 73_[-1(2.39e-10)]_6 chrIV:341273-341603 3.90e-04 47_[+3(7.06e-07)]_32 chrIV:1162689-1163029 9.93e-01 100 chrX:523894-523994 1.04e-07 43_[+1(2.15e-11)]_36 chrXII:962924-963250 1.52e-01 100 chrVII:73770-74066 4.69e-05 8_[+1(2.52e-08)]_46_[-1(2.91e-05)]_\ 4 chrXVI:143547-143887 9.94e-01 100 chrIV:1175673-1176047 3.21e-09 23_[-1(1.15e-06)]_8_[-2(6.48e-10)]_\ 19 chrXIV:720785-721125 9.74e-01 100 chrXI:490774-491072 7.75e-01 100 chrVII:701947-702287 9.93e-01 100 chrII:326697-327068 1.43e-03 7_[+1(1.37e-05)]_72 chrXII:818458-818772 2.61e-01 100 chrXI:84031-84327 2.69e-02 100 chrX:607874-607974 3.88e-03 38_[-3(1.40e-06)]_41 chrIV:321696-321947 2.19e-02 26_[-3(6.61e-06)]_5_[-3(2.13e-05)]_\ 27 chrVII:440623-440994 2.48e-04 23_[+1(5.18e-07)]_56 chrXII:637922-638262 6.24e-01 100 chrXVI:810464-810779 1.07e-01 100 chrXII:32-210 9.65e-01 100 chrIX:249067-249413 7.92e-01 100 chrXIV:167052-167392 1.00e+00 100 chrVII:185657-185925 4.33e-05 19_[+1(1.05e-08)]_60 chrXIV:602204-602407 6.43e-06 61_[-1(1.41e-09)]_18 chrXV:1025759-1026008 5.82e-03 41_[-3(2.62e-06)]_38 chrV:438534-438887 7.04e-05 44_[-1(2.52e-08)]_35 chrVII:601099-601439 9.02e-01 100 chrXII:651002-651239 1.04e-04 68_[-3(2.17e-07)]_11 chrX:703302-703402 3.62e-03 36_[+3(1.00e-06)]_43 chrXVI:406240-406518 6.17e-04 40_[-3(3.76e-07)]_39 chrXI:99769-99902 2.75e-01 100 chrXIII:131647-132060 1.70e-11 31_[+2(8.85e-13)]_7_[+1(1.99e-06)]_\ 12 chrVIII:36130-36364 3.71e-03 49_[+3(2.62e-06)]_30 chrIV:835813-836120 1.15e-03 33_[-3(1.56e-06)]_46 chrXIV:500410-500764 5.34e-01 100 chrXII:636538-636878 9.97e-01 100 chrXVI:173307-173430 4.98e-01 100 chrX:432985-433085 8.71e-01 100 chrIV:525212-525335 9.94e-01 100 chrVII:557645-558000 4.62e-02 27_[-2(6.66e-05)]_44 chrXIII:321038-321349 8.70e-13 13_[+2(3.75e-10)]_8_[+1(2.39e-10)]_\ 29 chrVI:137299-137708 2.08e-06 42_[+2(1.52e-09)]_29 chrVII:95407-95747 1.88e-01 100 chrXII:48697-49066 6.13e-04 64_[+3(1.00e-06)]_15 chrXI:458391-458861 2.57e-02 55_[-2(4.18e-05)]_16 chrIX:31-180 4.14e-04 9_[-3(1.37e-05)]_70 chrIII:1046-1230 6.96e-01 100 chrV:443174-443486 9.51e-01 100 chrIII:147857-148197 3.29e-01 100 chrXI:517837-518096 7.16e-07 76_[-1(2.39e-10)]_3 chrIX:300110-300477 7.34e-06 31_[+1(1.05e-08)]_48 chrVII:561464-561915 2.07e-08 78_[+1(2.15e-11)]_1 chrXVI:405039-405476 5.95e-01 100 chrVI:83034-83374 7.84e-01 100 chrXV:506537-506877 3.38e-01 100 chrXVI:56108-56464 1.31e-04 12_[+1(1.38e-06)]_67 chrXVI:785707-786047 6.40e-01 100 chrXII:856836-857176 4.04e-01 100 chrI:180980-181391 8.78e-04 10_[-1(2.17e-07)]_69 chrXVI:860213-860515 8.30e-04 69_[-1(1.04e-06)]_10 chrXI:308047-308356 1.00e-10 2_[+2(7.08e-10)]_9_[+1(2.52e-08)]_\ 39 chrIII:168198-168523 1.02e-10 [+2(1.94e-11)]_7_[+1(9.73e-06)]_43 chrXIV:444494-444760 8.54e-03 36_[+3(1.93e-06)]_43 chrV:140458-140836 9.98e-04 70_[+3(2.50e-07)]_9 chrXII:805538-805737 3.14e-03 34_[-3(7.06e-07)]_45 chrXV:281987-282343 8.81e-06 10_[+3(3.00e-05)]_22_[-1(1.04e-06)]_\ 26 chrIII:227778-228140 3.26e-08 37_[-1(2.39e-10)]_42 chrIII:178349-178658 7.53e-03 11_[+3(2.14e-06)]_3_[-3(1.98e-05)]_\ 44 chrXII:713127-713532 1.12e-01 100 chrIV:118432-118772 5.05e-01 100 chrX:424421-424521 9.34e-01 100 chrXV:980803-980899 2.47e-01 96 chrX:538386-538486 8.59e-04 52_[-1(1.26e-06)]_27 chrXV:113665-113967 1.42e-12 40_[-1(8.96e-09)]_8_[-2(1.72e-11)]_\ 2 chrI:142207-142547 1.32e-01 100 chrIII:14549-14769 7.63e-01 100 chrII:557850-558190 6.44e-01 100 chrXI:313346-313634 1.46e-02 54_[-3(1.09e-05)]_25 chrXI:46687-46954 1.26e-02 10_[+1(2.37e-06)]_69 chrXII:731900-732256 2.40e-06 66_[-1(9.74e-10)]_13 chrX:541330-541430 5.20e-02 70_[-1(5.61e-05)]_9 chrXIII:551390-551772 3.09e-02 4_[+3(7.83e-06)]_75 chrXIV:586270-586370 6.14e-01 100 chrXV:409676-410016 4.95e-01 100 chrV:69017-69357 1.14e-05 35_[+3(3.58e-08)]_44 chrVI:223027-223367 5.67e-01 100 chrXIII:504728-505167 4.58e-04 2_[-1(2.17e-07)]_77 chrII:60867-61256 4.84e-03 54_[+3(1.00e-06)]_25 chrXV:884165-884505 5.42e-01 100 chrV:101276-101616 7.43e-01 100 chrVII:310517-310848 3.59e-03 52_[-3(6.06e-06)]_27 chrXVI:210127-210452 6.86e-01 100 chrVI:143738-144078 5.91e-01 100 chrIV:1525348-1525613 3.70e-06 5_[+3(1.98e-08)]_74 chrIV:217181-217542 1.19e-04 1_[-3(6.25e-07)]_78 chrXIII:650864-651111 2.70e-05 42_[-3(3.04e-09)]_37 chrXV:94485-94824 5.19e-03 29_[-3(8.94e-07)]_50 chrVII:287254-287623 1.16e-03 41_[+1(1.38e-06)]_38 chrXV:623307-623647 5.69e-01 100 chrVIII:134163-134501 1.02e-10 43_[-1(9.73e-06)]_7_[-2(1.94e-11)] chrVIII:505176-505516 8.97e-01 100 chrIX:316150-316558 9.12e-03 46_[-3(3.50e-06)]_33 chrXIII:626553-626841 9.88e-01 100 chrII:332338-332717 3.87e-03 46_[-3(7.06e-07)]_33 chrXIV:415536-415876 4.25e-01 100 chrVII:788336-788724 1.85e-03 41_[+3(2.37e-06)]_38 chrVII:541633-542127 1.37e-08 52_[-2(3.71e-12)]_19 chrIII:315683-316023 1.62e-01 100 chrII:89659-89942 3.49e-04 43_[+3(1.88e-07)]_36 chrXIII:379193-379552 2.16e-04 60_[+1(1.38e-06)]_19 chrXIII:225377-225694 2.08e-03 58_[-3(4.28e-07)]_21 chrXIII:267989-268244 2.79e-01 100 chrX:374457-374557 8.05e-03 14_[+1(1.99e-06)]_65 chrXI:618826-619185 2.01e-03 26_[-3(7.83e-06)]_1_[+3(4.23e-06)]_\ 31 chrXI:218241-218581 9.91e-01 100 chrIX:324160-324527 8.49e-06 19_[+2(5.76e-08)]_7_[+1(5.61e-05)]_\ 24 chrXIII:761959-762176 7.76e-01 100 chrVII:883612-883952 3.73e-01 100 chrIV:1355722-1356011 1.51e-03 15_[+3(3.29e-07)]_3_[+3(2.89e-06)]_\ 40 chrIX:183378-183681 2.31e-05 8_[+1(1.41e-09)]_71 chrXV:842482-842822 5.19e-01 100 chrXVI:560057-560462 1.54e-04 54_[+1(5.18e-07)]_25 chrXVI:378018-378358 8.90e-01 100 chrXII:214770-215130 2.22e-06 29_[+1(1.69e-09)]_50 chrII:235117-235457 9.93e-01 100 chrXII:1064908-1065331 7.30e-09 16_[+3(3.53e-10)]_5_[+3(8.94e-07)]_\ [-1(2.81e-06)]_16 chrIX:254275-254513 8.96e-05 6_[+3(1.74e-06)]_29_[+3(4.15e-05)]_\ 23 chrXII:589122-589208 3.39e-01 86 chrXV:340153-340551 2.83e-11 6_[+2(6.01e-09)]_8_[+1(8.96e-09)]_\ 36 chrXV:505127-505466 7.31e-03 46_[-3(1.74e-06)]_4_[-3(1.09e-05)]_\ 8 chrX:701752-701852 6.04e-01 100 chrI:229459-229668 5.76e-01 100 chrIV:1489207-1489569 5.46e-01 100 chrIV:411312-411590 1.18e-06 32_[-3(1.00e-06)]_4_[+1(1.99e-06)]_\ 22 chrXIII:259064-259408 1.04e-07 27_[+1(2.15e-11)]_52 chrV:441829-442591 2.92e-01 100 chrXVI:188664-188907 1.39e-03 53_[-3(8.51e-06)]_26 chrIV:470304-470644 2.99e-01 100 chrII:248413-248753 6.49e-01 100 chrVII:371282-371420 1.80e-04 52_[-3(5.16e-08)]_27 chrV:102209-102549 4.67e-01 100 chrV:301571-301911 9.55e-01 100 chrII:9411-9670 6.63e-01 100 chrXI:162325-162706 1.70e-11 31_[+2(8.85e-13)]_7_[+1(1.99e-06)]_\ 12 chrII:181379-181606 7.63e-04 51_[-3(1.39e-07)]_28 chrXIV:217333-217580 3.38e-01 100 chrIV:1150819-1151109 2.43e-07 1_[+1(7.65e-11)]_78 chrXII:262807-263130 9.16e-04 45_[-3(1.12e-06)]_34 chrX:197248-197348 3.13e-01 100 chrXII:498531-498920 1.88e-01 100 chrM:58250-58454 9.91e-01 100 chrII:613820-614160 9.71e-01 100 chrXIV:631765-632089 7.41e-04 14_[+1(1.47e-05)]_65 chrXII:348404-348539 7.90e-01 100 chrIV:599697-600037 3.77e-03 28_[+2(8.98e-05)]_43 chrII:347430-347689 6.02e-01 100 chrV:529479-529819 3.76e-01 100 chrXV:663631-664046 1.00e-10 33_[+2(7.08e-10)]_9_[+1(2.52e-08)]_\ 8 chrX:115796-115896 1.37e-08 17_[+2(3.71e-12)]_54 chrXV:978850-979107 2.80e-02 2_[+3(3.21e-05)]_77 chrIV:125314-125654 2.27e-04 36_[+3(2.87e-07)]_43 chrXI:704-1044 6.32e-01 100 chrXI:283080-283420 4.98e-01 100 chrXII:673809-674222 1.11e-02 58_[-1(2.81e-06)]_21 chrXV:300898-301308 2.39e-04 48_[-1(6.37e-07)]_31 chrVII:205362-205707 5.44e-05 41_[-1(2.17e-07)]_38 chrXIII:552898-553238 7.73e-04 53_[-3(1.93e-06)]_26 chrX:75353-75453 5.26e-03 39_[+3(1.26e-06)]_40 chrVII:784965-785305 4.28e-01 100 chrIV:1075351-1075664 1.37e-07 24_[+2(8.44e-10)]_8_[+1(7.89e-05)]_\ 18 chrII:415524-415860 2.02e-03 33_[+3(4.28e-07)]_46 chrV:362791-363131 2.22e-01 100 chrXIII:671448-671788 6.11e-01 100 chrXIV:726019-726379 2.56e-06 42_[+1(1.05e-08)]_37 chrX:396645-396745 8.30e-04 17_[+1(1.04e-06)]_62 chrV:131045-131338 6.48e-01 100 chrVIII:452661-452770 8.20e-01 100 chrXIV:230527-230867 6.62e-01 100 chrXV:216269-216628 4.27e-03 59_[-3(1.12e-06)]_20 chrVII:352292-352632 3.85e-03 41_[-3(1.00e-06)]_38 chrXVI:76390-76692 5.72e-04 44_[+3(3.85e-06)]_35 chrV:135267-135662 4.43e-14 20_[+2(2.13e-12)]_8_[+1(1.05e-08)]_\ 22 chrXV:259482-259822 9.73e-01 100 chrVIII:126510-126850 6.35e-01 100 chrXIII:480512-480838 4.43e-14 5_[+2(2.13e-12)]_8_[+1(1.05e-08)]_\ 37 chrVI:226569-226900 4.43e-14 13_[+2(2.13e-12)]_8_[+1(1.05e-08)]_\ 29 chrXII:793751-794076 8.88e-02 59_[-1(5.61e-05)]_20 chrXII:1051938-1052290 5.81e-15 16_[+2(2.93e-13)]_9_[+1(1.41e-09)]_\ 25 chrXII:710536-710876 2.26e-04 75_[-3(1.62e-07)]_4 chrXV:724928-725268 2.22e-01 100 chrIV:1062761-1063101 7.07e-04 68_[+3(4.87e-07)]_11 chrXII:952975-953315 8.81e-01 100 chrIV:130104-130225 8.19e-01 100 chrXIV:234178-234518 3.81e-01 100 chrV:362189-362464 1.81e-02 72_[-3(7.83e-06)]_7 chrV:6197-6538 4.01e-07 30_[-3(1.98e-08)]_49 chrII:557338-557678 4.23e-01 100 chrXIV:585915-586152 9.83e-01 100 chrXV:968162-968343 4.36e-04 59_[+3(3.18e-06)]_20 chrVII:422932-423290 9.86e-05 35_[-1(2.17e-07)]_44 chrXII:932095-932486 1.33e-03 11_[+3(2.50e-07)]_20_[+3(1.56e-06)]_\ 27 chrXI:379533-379788 1.72e-05 74_[-1(2.52e-08)]_5 chrIV:1329324-1329664 1.64e-01 100 chrVII:227650-227990 6.90e-01 100 chrXIV:250063-250403 1.05e-01 100 chrX:58985-59085 1.42e-12 [+2(1.72e-11)]_8_[+1(8.96e-09)]_42 chrV:51956-52296 9.86e-01 100 chrXIII:924168-924408 1.05e-05 57_[+3(2.14e-06)]_1_[-1(5.81e-06)] chrIV:1301972-1302312 2.87e-01 100 chrIV:976460-976800 3.87e-01 100 chrXIII:550148-550488 6.98e-01 100 chrIV:1403044-1403147 8.95e-01 100 chrV:86449-86761 1.00e-07 53_[-1(2.15e-11)]_26 chrXIV:229895-230053 9.97e-01 100 chrIX:174888-175266 3.20e-13 8_[-1(8.96e-09)]_8_[-2(1.72e-11)]_\ 34 chrXI:617688-618028 6.35e-01 100 chrVII:319623-319985 2.40e-04 59_[-2(3.53e-08)]_12 chrXV:288051-288323 4.35e-04 59_[-1(1.52e-06)]_20 chrXVI:694058-694398 6.91e-01 100 chrVII:730968-731360 1.05e-10 27_[-1(3.32e-08)]_9_[-2(1.52e-09)]_\ 14 chrV:469292-469581 1.20e-04 75_[-1(2.52e-08)]_4 chrIV:519569-519926 2.65e-06 50_[-1(1.05e-08)]_29 chrII:81980-82320 3.67e-01 100 chrXIII:362926-363247 2.40e-04 60_[-2(3.53e-08)]_11 chrVII:807702-808042 8.44e-01 100 chrX:354070-354170 6.40e-03 72_[-1(1.52e-06)]_7 chrVII:122124-122376 1.28e-04 73_[-1(1.05e-08)]_6 chrX:702696-702796 4.53e-01 100 chrXII:5499-5864 1.17e-08 33_[-3(5.02e-10)]_9_[-3(1.98e-08)]_\ 16 chrXI:326848-327188 9.59e-01 100 chrXIV:379211-379551 5.80e-01 100 chrVI:221760-222069 1.28e-03 48_[+3(4.87e-07)]_31 chrVI:210573-210867 5.83e-03 11_[+1(1.52e-06)]_68 chrVII:784748-785088 2.65e-01 100 chrXI:551374-551714 9.85e-01 100 chrVI:162073-162381 8.30e-04 55_[-1(1.04e-06)]_24 chrXV:854036-854409 9.98e-14 24_[+2(7.18e-12)]_8_[+1(1.69e-09)]_\ 18 chrVII:779450-779808 8.15e-09 41_[-1(6.76e-06)]_7_[-2(7.08e-10)]_\ 2 chrVIII:150431-150771 6.78e-01 100 chrII:350654-350953 1.10e-02 78_[-1(9.73e-06)]_1 chrXI:432638-432978 8.18e-01 100 chrVII:882521-882874 2.37e-01 100 chrV:492265-492576 2.69e-05 28_[+1(8.96e-09)]_51 chrXV:606186-606526 8.69e-01 100 chrIV:437559-437948 1.04e-07 73_[-1(2.15e-11)]_6 chrXV:353889-354269 3.20e-13 21_[+2(1.72e-11)]_8_[+1(8.96e-09)]_\ 21 chrVII:312013-312136 9.48e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************