Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.017379 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.057663 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.077728 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.015667 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.066457 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background Finished invoke: name: bg status: 0 time: 0.012312 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 810.870317 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 83.528397 Invoking: centrimo -seqlen 444 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.41747 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.464307 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary YSDGRAGRTCMBSGGTTCGATYC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.736246 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary GCSVRDTKGKTARSGCGYCNGACTNDWAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.452789 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary YHACAYCCRTACAYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.363218 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary ACCWCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.369069 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary ARAAAAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.411503 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary AAGATTTM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.230728 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary CTTRGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.312936 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary ACCTAAAS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.169654 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary GTCACTS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.1895 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary AGCKCGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.23344 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary ATAATACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.179253 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.247843 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary CAMGGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.277747 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary AGAAGYCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.19621 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary ATCWGAAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.192058 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background -primary RCGGGGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.223543 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif YSDGRAGRTCMBSGGTTCGATYC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo1 status: 0 time: 0.267084 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif GCSVRDTKGKTARSGCGYCNGACTNDWAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo2 status: 0 time: 0.268144 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif YHACAYCCRTACAYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo3 status: 0 time: 0.255413 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif ACCWCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo4 status: 0 time: 0.154741 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif ARAAAAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo5 status: 0 time: 0.157631 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif AAGATTTM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo6 status: 0 time: 0.173909 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif CTTRGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo7 status: 0 time: 0.154581 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif ACCTAAAS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo8 status: 0 time: 0.173149 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif GTCACTS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo9 status: 0 time: 0.169726 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif AGCKCGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo10 status: 0 time: 0.187822 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif ATAATACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo11 status: 0 time: 0.171359 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo12 status: 0 time: 0.18234 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif CAMGGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo13 status: 0 time: 0.161619 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif AGAAGYCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo14 status: 0 time: 0.177252 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif ATCWGAAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo15 status: 0 time: 0.172263 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/background --motif RCGGGGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/BY4741--MIG1.fa Finished invoke: name: fimo16 status: 0 time: 0.170232 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MIG1/summary.tsv Finished invoke: name: summary status: 0 time: 0.162189 Done