******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MAC1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrVIII:125858-126342 1.0000 100 chrVI:223887-224271 1.0000 100 chrXV:623262-623618 1.0000 100 chrIII:178298-178753 1.0000 100 chrXII:201752-202073 1.0000 100 chrXII:932041-932538 1.0000 100 chrX:424290-424390 1.0000 100 chrII:169357-169847 1.0000 100 chrXV:253014-253504 1.0000 100 chrII:347358-347916 1.0000 100 chrIX:324006-324579 1.0000 100 chrXV:1027924-1028289 1.0000 100 chrXVI:55839-56566 1.0000 100 chrIX:99603-100061 1.0000 100 chrVII:830577-831067 1.0000 100 chrVI:191280-191875 1.0000 100 chrXIII:24904-25631 1.0000 100 chrXIII:183707-184166 1.0000 100 chrXII:211947-212175 1.0000 100 chrXIV:783784-784183 1.0000 100 chrXVI:436666-437021 1.0000 100 chrIV:644974-645439 1.0000 100 chrXII:673547-674300 1.0000 100 chrXVI:377933-378378 1.0000 100 chrXII:201956-202446 1.0000 100 chrVII:794164-794663 1.0000 100 chrVII:480192-480715 1.0000 100 chrXV:901448-901756 1.0000 100 chrXI:46516-47015 1.0000 100 chrI:9770-10260 1.0000 100 chrX:528247-528347 1.0000 100 chrVII:736107-736672 1.0000 100 chrVII:926301-926791 1.0000 100 chrXII:10982-11610 1.0000 100 chrXVI:860067-860609 1.0000 100 chrIV:1044474-1044964 1.0000 100 chrXIV:567843-568485 1.0000 100 chrIV:1302079-1302325 1.0000 100 chrVII:205254-205777 1.0000 100 chrXII:855970-856462 1.0000 100 chrIV:358078-358447 1.0000 100 chrXII:369195-370104 1.0000 100 chrI:81878-82299 1.0000 100 chrXV:968087-968434 1.0000 100 chrIV:218366-218690 1.0000 100 chrIV:355248-355738 1.0000 100 chrVII:310404-311689 1.0000 100 chrV:266309-266537 1.0000 100 chrVI:226505-226954 1.0000 100 chrXV:621306-621874 1.0000 100 chrIV:915529-916019 1.0000 100 chrXIII:296738-298895 1.0000 100 chrV:267742-268232 1.0000 100 chrX:74550-74650 1.0000 100 chrIV:229378-229843 1.0000 100 chrXV:409669-409934 1.0000 100 chrXVI:581861-582417 1.0000 100 chrXI:43904-44394 1.0000 100 chrIV:83334-83806 1.0000 100 chrX:139194-139294 1.0000 100 chrIII:168857-169316 1.0000 100 chrXIII:499820-500228 1.0000 100 chrXIII:510908-511124 1.0000 100 chrVII:930745-931292 1.0000 100 chrXI:313238-313730 1.0000 100 chrVII:541546-542190 1.0000 100 chrXII:589032-589312 1.0000 100 chrII:392901-393391 1.0000 100 chrIV:472927-473417 1.0000 100 chrVIII:5222-5623 1.0000 100 chrXII:793709-795246 1.0000 100 chrXV:970164-970466 1.0000 100 chrVII:784907-785215 1.0000 100 chrXVI:787399-787725 1.0000 100 chrXIII:225311-225771 1.0000 100 chrIV:980798-981310 1.0000 100 chrIV:340299-340651 1.0000 100 chrVIII:466714-467277 1.0000 100 chrXI:309492-309703 1.0000 100 chrXIV:63079-63609 1.0000 100 chrXIII:263627-264117 1.0000 100 chrVIII:85139-85616 1.0000 100 chrIV:1042807-1043297 1.0000 100 chrIX:183229-183727 1.0000 100 chrV:424931-425237 1.0000 100 chrXV:115585-116075 1.0000 100 chrIX:69487-69736 1.0000 100 chrIV:324297-324787 1.0000 100 chrIII:294857-295774 1.0000 100 chrVII:422865-423367 1.0000 100 chrVII:856728-857007 1.0000 100 chrVIII:147756-147948 1.0000 100 chrIV:410166-410592 1.0000 100 chrIV:231757-232247 1.0000 100 chrXIV:631676-632171 1.0000 100 chrXIII:632818-633308 1.0000 100 chrIV:341224-341659 1.0000 100 chrVII:346077-346483 1.0000 100 chrV:152689-153137 1.0000 100 chrVII:876128-876734 1.0000 100 chrIX:438783-439377 1.0000 100 chrXIV:88831-89832 1.0000 100 chrVIII:109724-109921 1.0000 100 chrXIII:549955-550255 1.0000 100 chrXV:866520-866980 1.0000 100 chrX:607806-607906 1.0000 100 chrIV:220884-221374 1.0000 100 chrV:449545-449942 1.0000 100 chrXIII:632603-633093 1.0000 100 chrV:269241-269465 1.0000 100 chrXVI:435631-436257 1.0000 100 chrVII:828484-829037 1.0000 100 chrV:438471-438941 1.0000 100 chrXV:300818-301457 1.0000 100 chrIV:1093064-1093554 1.0000 100 chrXV:673311-673801 1.0000 100 chrV:151928-152254 1.0000 100 chrVII:440407-441297 1.0000 100 chrXV:93793-94362 1.0000 100 chrVII:366054-366742 1.0000 100 chrX:519363-519463 1.0000 100 chrX:517631-517731 1.0000 100 chrVII:110405-110943 1.0000 100 chrV:6093-6634 1.0000 100 chrXVI:880089-880592 1.0000 100 chrIV:976384-976874 1.0000 100 chrXV:305174-305400 1.0000 100 chrXII:1041369-1041859 1.0000 100 chrIV:538983-539233 1.0000 100 chrV:441765-442651 1.0000 100 chrXIV:499297-499717 1.0000 100 chrVIII:386435-386907 1.0000 100 chrXVI:303987-304357 1.0000 100 chrV:461528-462173 1.0000 100 chrIV:322207-322739 1.0000 100 chrIX:256097-256319 1.0000 100 chrXV:678378-679237 1.0000 100 chrXV:571682-572254 1.0000 100 chrXIV:628705-629002 1.0000 100 chrXI:326163-326769 1.0000 100 chrIV:1256877-1257329 1.0000 100 chrVII:10162-10412 1.0000 100 chrV:308216-308342 1.0000 100 chrIII:10993-11549 1.0000 100 chrVIII:296862-297268 1.0000 100 chrXVI:856676-857133 1.0000 100 chrXIV:575268-575752 1.0000 100 chrX:349067-349167 1.0000 100 chrVII:544308-544875 1.0000 100 chrXVI:575135-575625 1.0000 100 chrXI:490706-491213 1.0000 100 chrV:397572-397863 1.0000 100 chrIV:1358348-1358838 1.0000 100 chrXIII:224036-224419 1.0000 100 chrIX:300054-300580 1.0000 100 chrXI:379473-380015 1.0000 100 chrIV:133002-133465 1.0000 100 chrXVI:787037-787527 1.0000 100 chrVII:364910-365446 1.0000 100 chrXI:517783-518195 1.0000 100 chrIV:45875-46207 1.0000 100 chrV:176839-177353 1.0000 100 chrIV:1305409-1305924 1.0000 100 chrIX:257337-257854 1.0000 100 chrVII:661448-661962 1.0000 100 chrII:235687-236038 1.0000 100 chrXV:113554-114115 1.0000 100 chrXV:779659-780914 1.0000 100 chrIV:974278-974406 1.0000 100 chrVII:919830-920254 1.0000 100 chrXIV:169585-170075 1.0000 100 chrVII:727691-728117 1.0000 100 chrVII:439207-439697 1.0000 100 chrXIV:330746-331147 1.0000 100 chrV:60991-62225 1.0000 100 chrXV:621306-621860 1.0000 100 chrVII:371215-371493 1.0000 100 chrV:492145-492634 1.0000 100 chrXII:940338-941447 1.0000 100 chrXII:234481-234971 1.0000 100 chrXI:74380-74956 1.0000 100 chrX:204445-204545 1.0000 100 chrV:85102-85488 1.0000 100 chrVI:135643-136133 1.0000 100 chrV:59115-59427 1.0000 100 chrXIV:172468-172594 1.0000 100 chrVIII:411107-411699 1.0000 100 chrVII:481850-482626 1.0000 100 chrVII:555235-555714 1.0000 100 chrXVI:188595-188966 1.0000 100 chrVII:479241-480023 1.0000 100 chrXIII:145842-146332 1.0000 100 chrVII:803331-803821 1.0000 100 chrIV:130525-131020 1.0000 100 chrIV:651770-652260 1.0000 100 chrVII:1000316-1000599 1.0000 100 chrIV:488518-489101 1.0000 100 chrXV:40139-40685 1.0000 100 chrIX:137654-138144 1.0000 100 chrVIII:7958-8121 1.0000 100 chrXVI:64525-65015 1.0000 100 chrII:167832-168236 1.0000 100 chrII:414846-415061 1.0000 100 chrXVI:819239-819793 1.0000 100 chrII:237736-238494 1.0000 100 chrIV:946067-946660 1.0000 100 chrIV:1092864-1093354 1.0000 100 chrVI:5227-5686 1.0000 100 chrVI:223125-223274 1.0000 100 chrXVI:520133-520554 1.0000 100 chrVII:878561-879052 1.0000 100 chrIII:130313-130803 1.0000 100 chrII:169324-169599 1.0000 100 chrXIII:808033-808596 1.0000 100 chrX:263126-263226 1.0000 100 chrXII:628147-628702 1.0000 100 chrXI:305844-306334 1.0000 100 chrXV:900098-900336 1.0000 100 chrI:143024-143610 1.0000 100 chrIII:172669-173159 1.0000 100 chrV:138378-139013 1.0000 100 chrXII:370497-370938 1.0000 100 chrXIV:546859-547383 1.0000 100 chrIV:492275-492598 1.0000 100 chrVII:115250-115780 1.0000 100 chrV:13253-13743 1.0000 100 chrIII:142500-143015 1.0000 100 chrI:498-816 1.0000 100 chrII:197227-197931 1.0000 100 chrVIII:382880-383427 1.0000 100 chrXV:624118-624587 1.0000 100 chrXV:438368-438973 1.0000 100 chrXI:55641-55777 1.0000 100 chrXIII:372292-372796 1.0000 100 chrV:139680-140910 1.0000 100 chrXI:415240-415730 1.0000 100 chrIII:177125-177571 1.0000 100 chrXVI:404781-405553 1.0000 100 chrVII:483387-483703 1.0000 100 chrX:157418-157518 1.0000 100 chrXVI:329069-329559 1.0000 100 chrXVI:775607-776078 1.0000 100 chrXIII:671673-671857 1.0000 100 chrXIV:96028-96514 1.0000 100 chrVI:210417-210920 1.0000 100 chrIV:322926-323436 1.0000 100 chrVIII:148912-149347 1.0000 100 chrVIII:553467-553596 1.0000 100 chrXV:228054-228607 1.0000 100 chrVII:185488-185988 1.0000 100 chrIV:217084-217667 1.0000 100 chrIV:1237242-1237723 1.0000 100 chrXII:232110-233931 1.0000 100 chrXV:900732-901006 1.0000 100 chrXVI:244114-244268 1.0000 100 chrVII:401342-401828 1.0000 100 chrIV:578122-578612 1.0000 100 chrIV:1525285-1525731 1.0000 100 chrIV:1175607-1176191 1.0000 100 chrVII:412115-412633 1.0000 100 chrXVI:731875-732391 1.0000 100 chrXIV:444427-444826 1.0000 100 chrIV:470352-470514 1.0000 100 chrXI:551738-552228 1.0000 100 chrXIII:626292-626899 1.0000 100 chrV:362811-363301 1.0000 100 chrX:156737-156837 1.0000 100 chrII:350561-351024 1.0000 100 chrIV:45875-46209 1.0000 100 chrXII:5390-5981 1.0000 100 chrII:405571-406193 1.0000 100 chrV:443002-443562 1.0000 100 chrXII:231165-231655 1.0000 100 chrVII:364143-364404 1.0000 100 chrVI:149454-149944 1.0000 100 chrX:651182-651282 1.0000 100 chrXV:444924-445168 1.0000 100 chrXIII:837661-838219 1.0000 100 chrXIV:281964-282411 1.0000 100 chrXIII:352036-352490 1.0000 100 chrXIII:551322-551829 1.0000 100 chrII:60644-61319 1.0000 100 chrIV:1450846-1451307 1.0000 100 chrXIII:124282-124773 1.0000 100 chrV:99879-100435 1.0000 100 chrXV:160454-160776 1.0000 100 chrVII:845417-845908 1.0000 100 chrVIII:134062-134604 1.0000 100 chrXVI:302580-303020 1.0000 100 chrXVI:689223-689885 1.0000 100 chrV:101333-101630 1.0000 100 chrXV:841815-842002 1.0000 100 chrV:145525-146015 1.0000 100 chrXV:725261-725623 1.0000 100 chrII:6322-6769 1.0000 100 chrXII:448482-448987 1.0000 100 chrVII:700463-701345 1.0000 100 chrXI:284377-284732 1.0000 100 chrXII:366039-366534 1.0000 100 chrXII:710624-710861 1.0000 100 chrXII:875196-875723 1.0000 100 chrXVI:653848-654077 1.0000 100 chrXV:594150-594732 1.0000 100 chrXI:578758-579290 1.0000 100 chrIV:520680-521216 1.0000 100 chrVI:4390-5032 1.0000 100 chrIV:221914-222363 1.0000 100 chrXV:110775-111300 1.0000 100 chrVIII:132837-133409 1.0000 100 chrIII:15158-15935 1.0000 100 chrVII:882465-883397 1.0000 100 chrV:354659-355309 1.0000 100 chrX:531578-531678 1.0000 100 chrIV:491582-491927 1.0000 100 chrXVI:407514-407849 1.0000 100 chrIX:26-338 1.0000 100 chrXVI:785486-786457 1.0000 100 chrIV:231963-232453 1.0000 100 chrXII:592345-592908 1.0000 100 chrXVI:559968-560561 1.0000 100 chrXIII:650950-651440 1.0000 100 chrII:235063-235403 1.0000 100 chrXII:712946-713606 1.0000 100 chrXVI:850270-850401 1.0000 100 chrII:165073-165418 1.0000 100 chrX:373016-373116 1.0000 100 chrIII:127521-127924 1.0000 100 chrXVI:279855-280345 1.0000 100 chrXV:445767-446153 1.0000 100 chrXVI:794431-794834 1.0000 100 chrX:90034-90134 1.0000 100 chrXI:432629-433005 1.0000 100 chrIII:315572-316072 1.0000 100 chrXIII:923377-923861 1.0000 100 chrXV:253763-254143 1.0000 100 chrIV:527190-527404 1.0000 100 chrX:121794-121894 1.0000 100 chrXII:650931-651298 1.0000 100 chrXII:784143-784600 1.0000 100 chrVII:352330-352820 1.0000 100 chrIV:667776-668300 1.0000 100 chrV:130861-131378 1.0000 100 chrVII:534577-535311 1.0000 100 chrXV:287926-288409 1.0000 100 chrXII:1063938-1064428 1.0000 100 chrII:414019-414248 1.0000 100 chrXII:48643-49129 1.0000 100 chrVI:137240-137816 1.0000 100 chrVI:95425-95857 1.0000 100 chrIV:652914-653036 1.0000 100 chrVII:311860-312212 1.0000 100 chrXV:619594-619838 1.0000 100 chrXV:226415-226888 1.0000 100 chrVII:438550-438930 1.0000 100 chrXIV:569684-570131 1.0000 100 chrXV:94428-94875 1.0000 100 chrVIII:382282-382853 1.0000 100 chrI:138918-139440 1.0000 100 chrXVI:283198-283437 1.0000 100 chrXV:464184-464738 1.0000 100 chrV:440889-441379 1.0000 100 chrX:22556-22656 1.0000 100 chrX:58899-58999 1.0000 100 chrXIV:500118-500799 1.0000 100 chrVII:287180-287728 1.0000 100 chrIX:255342-255832 1.0000 100 chrVII:316497-316932 1.0000 100 chrIV:512707-513197 1.0000 100 chrI:180930-181499 1.0000 100 chrIII:292579-293030 1.0000 100 chrXIV:442809-443438 1.0000 100 chrX:541260-541360 1.0000 100 chrXVI:406099-406581 1.0000 100 chrI:165988-166693 1.0000 100 chrIX:256507-256688 1.0000 100 chrXIII:731941-732492 1.0000 100 chrXII:499257-499627 1.0000 100 chrXII:799513-799790 1.0000 100 chrXII:84118-84473 1.0000 100 chrV:250073-250579 1.0000 100 chrX:390868-390968 1.0000 100 chrX:391845-391945 1.0000 100 chrVI:83872-84350 1.0000 100 chrXV:1003882-1004470 1.0000 100 chrXI:219671-220138 1.0000 100 chrIV:1150612-1151212 1.0000 100 chrXII:262712-263586 1.0000 100 chrXI:27-304 1.0000 100 chrXV:965981-966471 1.0000 100 chrVI:263781-264360 1.0000 100 chrV:135160-135762 1.0000 100 chrV:86372-86866 1.0000 100 chrV:102303-102482 1.0000 100 chrX:265252-265352 1.0000 100 chrII:266142-266694 1.0000 100 chrX:523789-523889 1.0000 100 chrIV:1116894-1117022 1.0000 100 chrIV:1461520-1462114 1.0000 100 chrII:332254-332797 1.0000 100 chrX:415805-415905 1.0000 100 chrXII:951023-951349 1.0000 100 chrXII:241513-242046 1.0000 100 chrIII:14214-15014 1.0000 100 chrIV:579015-580122 1.0000 100 chrXV:92880-93491 1.0000 100 chrIV:1213237-1213727 1.0000 100 chrII:236863-237243 1.0000 100 chrXIII:500776-501266 1.0000 100 chrIII:227672-228212 1.0000 100 chrXI:552230-552443 1.0000 100 chrXII:198666-198830 1.0000 100 chrXV:161099-161419 1.0000 100 chrXII:818764-819216 1.0000 100 chrV:110492-110875 1.0000 100 chrX:115745-115845 1.0000 100 chrXV:797028-797227 1.0000 100 chrII:478945-479259 1.0000 100 chrVII:439555-439860 1.0000 100 chrVIII:555898-556405 1.0000 100 chrXI:557138-557628 1.0000 100 chrVII:1083625-1083890 1.0000 100 chrXII:922072-922582 1.0000 100 chrXIV:505502-505881 1.0000 100 chrXV:526-1079 1.0000 100 chrXII:837716-838909 1.0000 100 chrIII:181291-181781 1.0000 100 chrXI:618780-619257 1.0000 100 chrXIII:504664-505321 1.0000 100 chrVII:648896-649449 1.0000 100 chrVI:265636-266126 1.0000 100 chrXIII:420350-420901 1.0000 100 chrXI:329619-330109 1.0000 100 chrXI:322383-322719 1.0000 100 chrV:435615-436099 1.0000 100 chrIV:440696-441186 1.0000 100 chrIV:1095098-1095681 1.0000 100 chrXV:80481-80971 1.0000 100 chrVIII:505786-506244 1.0000 100 chrIV:1075285-1075746 1.0000 100 chrXI:548999-549489 1.0000 100 chrIV:217084-217640 1.0000 100 chrXII:712288-712560 1.0000 100 chrV:301616-301852 1.0000 100 chrXI:458308-458913 1.0000 100 chrIX:254212-254579 1.0000 100 chrIX:68143-68550 1.0000 100 chrIX:316084-316644 1.0000 100 chrM:59537-59805 1.0000 100 chrXII:899262-899580 1.0000 100 chrIX:174802-175384 1.0000 100 chrIV:356683-356977 1.0000 100 chrVII:405257-405765 1.0000 100 chrVIII:115943-116424 1.0000 100 chrXII:637243-637733 1.0000 100 chrV:300789-301279 1.0000 100 chrX:354018-354118 1.0000 100 chrII:89623-89974 1.0000 100 chrXII:1051829-1052378 1.0000 100 chrVII:920856-921102 1.0000 100 chrX:374201-374301 1.0000 100 chrXIV:229681-230168 1.0000 100 chrXI:551574-551774 1.0000 100 chrXII:638425-638693 1.0000 100 chrXIV:783287-783547 1.0000 100 chrVIII:34948-35391 1.0000 100 chrIV:437481-438034 1.0000 100 chrVI:204752-205200 1.0000 100 chrV:311843-312354 1.0000 100 chrXIII:550733-550969 1.0000 100 chrXV:281865-282426 1.0000 100 chrVII:277009-277422 1.0000 100 chrXII:636677-637167 1.0000 100 chrX:529310-529410 1.0000 100 chrXIII:5247-5885 1.0000 100 chrXV:33-405 1.0000 100 chrXIV:241354-241741 1.0000 100 chrXVI:280751-281353 1.0000 100 chrVIII:150241-150731 1.0000 100 chrVII:480192-480719 1.0000 100 chrX:73347-73447 1.0000 100 chrIV:332293-332533 1.0000 100 chrIV:1354541-1354871 1.0000 100 chrX:75292-75392 1.0000 100 chrV:363661-363999 1.0000 100 chrVII:319566-320077 1.0000 100 chrXII:734620-735101 1.0000 100 chrIV:519509-520032 1.0000 100 chrV:394642-395132 1.0000 100 chrIII:163355-164024 1.0000 100 chrX:422653-422753 1.0000 100 chrVI:101132-101671 1.0000 100 chrXII:92284-92854 1.0000 100 chrV:430957-431665 1.0000 100 chrII:256655-256985 1.0000 100 chrXVI:571973-572565 1.0000 100 chrXV:167918-168496 1.0000 100 chrXIII:259000-259515 1.0000 100 chrXV:354589-355079 1.0000 100 chrXII:930849-931090 1.0000 100 chrIV:411236-411675 1.0000 100 chrVIII:554203-554391 1.0000 100 chrIX:316850-317193 1.0000 100 chrXII:522136-522466 1.0000 100 chrXII:1028148-1028599 1.0000 100 chrIX:287436-287662 1.0000 100 chrX:703229-703329 1.0000 100 chrXIV:24357-24591 1.0000 100 chrVII:738850-739369 1.0000 100 chrIII:783-1351 1.0000 100 chrIV:234183-234488 1.0000 100 chrXV:79731-80156 1.0000 100 chrXVI:214545-215284 1.0000 100 chrV:322017-322763 1.0000 100 chrV:551102-551581 1.0000 100 chrXVI:699893-700430 1.0000 100 chrII:36201-36617 1.0000 100 chrII:476941-477487 1.0000 100 chrVIII:385323-385648 1.0000 100 chrXV:1028575-1029180 1.0000 100 chrV:487130-487604 1.0000 100 chrV:117723-118340 1.0000 100 chrII:232535-232690 1.0000 100 chrXII:975816-976301 1.0000 100 chrVIII:452499-452932 1.0000 100 chrXVI:768934-769516 1.0000 100 chrXIV:495167-495652 1.0000 100 chrV:53492-54004 1.0000 100 chrVII:147967-148283 1.0000 100 chrXIII:290548-291030 1.0000 100 chrVIII:388721-389233 1.0000 100 chrVII:601133-601378 1.0000 100 chrXII:567819-568765 1.0000 100 chrXIII:370680-371170 1.0000 100 chrXII:781395-781911 1.0000 100 chrXVI:172830-173937 1.0000 100 chrVII:561372-562011 1.0000 100 chrXII:845708-846198 1.0000 100 chrVIII:381448-382084 1.0000 100 chrVII:278326-278584 1.0000 100 chrXI:500-1056 1.0000 100 chrVIII:358287-358828 1.0000 100 chrIV:1401198-1401627 1.0000 100 chrXV:1025711-1026059 1.0000 100 chrVII:328260-328971 1.0000 100 chrXV:159830-160140 1.0000 100 chrVII:788282-788792 1.0000 100 chrIV:1237944-1238394 1.0000 100 chrIV:1239778-1240037 1.0000 100 chrIV:1450017-1450507 1.0000 100 chrXII:498437-499022 1.0000 100 chrII:567491-567981 1.0000 100 chrXV:867772-868144 1.0000 100 chrXI:158176-158652 1.0000 100 chrVIII:237661-238221 1.0000 100 chrVIII:103860-104322 1.0000 100 chrVII:609463-609807 1.0000 100 chrII:644971-645440 1.0000 100 chrVIII:127487-127670 1.0000 100 chrIV:116843-117638 1.0000 100 chrXIII:733098-733483 1.0000 100 chrIX:256545-257035 1.0000 100 chrXIII:168538-169139 1.0000 100 chrII:326591-327127 1.0000 100 chrVI:64712-65381 1.0000 100 chrVII:73648-74163 1.0000 100 chrI:9973-10463 1.0000 100 chrVII:857228-857690 1.0000 100 chrIX:210434-210960 1.0000 100 chrXIII:572651-573239 1.0000 100 chrXVI:795715-796040 1.0000 100 chrXVI:323712-324202 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MAC1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MAC1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MAC1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 571 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 57100 N= 571 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.317 C 0.183 G 0.183 T 0.317 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--MAC1/background): A 0.322 C 0.178 G 0.178 T 0.322 ******************************************************************************** ******************************************************************************** MOTIF GSBYNYDTGGYCYAGTGGKTW MEME-1 width = 21 sites = 113 llr = 1759 E-value = 1.8e-329 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSBYNYDTGGYCYAGTGGKTW MEME-1 Description -------------------------------------------------------------------------------- Simplified A :::1222:2:::1a1::::36 pos.-specific C :43524::::653::11:11: probability G a531314:8a:32:9:6a4:: matrix T :143344a::424::92:563 bits 2.5 * * 2.2 * * * 2.0 * * * * 1.7 * * * ** * Relative 1.5 * *** ** * Entropy 1.2 * **** *** * (22.5 bits) 1.0 ** **** *** * 0.7 ** ***** ****** 0.5 **** ****** ****** * 0.2 **** **************** 0.0 --------------------- Multilevel GGTCGCTTGGCCTAGTGGTTA consensus CGTTTG A TGC T GAT sequence C C A A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYDTGGYCYAGTGGKTW MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrVI:204752-205200 - 50 1.26e-10 ACAAACGTTC GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrXI:219671-220138 + 41 1.26e-10 ACAGTAAATA GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrXI:517783-518195 + 49 1.26e-10 TATCTACTAT GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrXVI:856676-857133 + 48 1.26e-10 AACAAGATTC GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrIV:410166-410592 + 50 1.26e-10 TACAAATATT GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrIX:210434-210960 + 18 3.43e-10 TGAAATATCT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrV:551102-551581 - 47 3.43e-10 ACAGATTACA GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrVII:738850-739369 + 63 3.43e-10 GAAAAAAATA GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrXII:1051829-1052378 - 71 3.43e-10 CCTTTTCAT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrXIV:569684-570131 - 63 3.43e-10 AGATAACAGT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrIV:667776-668300 - 72 3.43e-10 TCCAAATT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrV:443002-443562 - 23 3.43e-10 ATTAAAATTT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrXVI:819239-819793 + 63 3.43e-10 ACAATAGAAT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrXVI:880089-880592 - 59 3.43e-10 ACAATATAAT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrIX:183229-183727 - 65 3.43e-10 ACAAATTCCT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrVIII:388721-389233 - 48 4.96e-10 ACAGATACAT GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXII:92284-92854 + 29 4.96e-10 AAGTTAATAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrVI:101132-101671 + 25 4.96e-10 ACAATAATTC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXV:464184-464738 + 39 4.96e-10 AAGTTAACAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrI:138918-139440 + 23 4.96e-10 CAATTAGTAC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXIV:546859-547383 + 23 4.96e-10 CGAAATAATC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXV:300818-301457 + 10 4.96e-10 GAAAAGATC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXIV:567843-568485 + 1 4.96e-10 . GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrV:311843-312354 - 27 8.45e-10 CAGAAATTCT GGGCACATGGCGCAGTTGGTA GCGCGCTTCC chrVII:794164-794663 + 54 8.45e-10 CATAGATTGC GGGCACATGGCGCAGTTGGTA GCGCGCTTCC chrXIII:259000-259515 - 12 1.18e-09 AAGTTAGTAT GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrIV:437481-438034 + 65 1.18e-09 TCATTAGTAA GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrX:523789-523889 - 64 1.18e-09 AGAGATTAAA GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrV:86372-86866 + 35 1.18e-09 AATGAGTTAT GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrVIII:132837-133409 - 14 1.18e-09 TATAATAAGT GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrIV:1305409-1305924 + 14 1.18e-09 TACAAATTAA GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrIV:980798-981310 - 31 1.18e-09 TGTAAATTGA GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrXII:592345-592908 - 23 1.64e-09 AACATACAAT GGGAGTTTGGCCGAGTGGTTT AAGGCGTCAG chrIII:227672-228212 + 50 2.60e-09 AAATCGAAAT GGCACTATGGCCGAGTGGTTA AGGCGAGAGA chrXVI:689223-689885 + 61 2.60e-09 GATTATTTTG GGCACTATGGCCGAGTGGTTA AGGCGACAGA chrXI:46516-47015 - 71 4.03e-09 AATTACTCA GCCCTTTTGGCCAAGTGGTAA GGCATCGCAC chrIV:1150612-1151212 - 59 5.34e-09 AAGTGTTTCA GTCCCAGTGGCCGAGTGGTTA AGGCGATGCC chrXII:784143-784600 + 33 5.34e-09 TTGTTCAACC GTCCCAGTGGCCGAGTGGTTA AGGCGATGCC chrVI:191280-191875 - 66 5.34e-09 AAGAGATTCT GTCCCAGTGGCCGAGTGGTTA AGGCGATGCC chrVII:73648-74163 - 27 7.01e-09 TCAATTAAGT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXIII:420350-420901 - 66 7.01e-09 ACAAATAACA GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrVII:412115-412633 - 23 7.01e-09 TCAAAAAACT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXIII:372292-372796 - 4 7.01e-09 AATAAAACCT GGTTTCGTGGTCTAGTCGGTT ATG chrV:438471-438941 + 44 7.01e-09 CAACAAATTA GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrVIII:85139-85616 - 24 7.01e-09 ATAAGAATTT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXV:594150-594732 - 14 7.99e-09 TGATTGAAAC GCGCAAGTGGTTCAGTGGTTA GAATTTATGC chrXV:110775-111300 - 26 1.17e-08 CAATTAACCC GGGCGGTTAGTGTAGTGGTTA TCATCCCACC chrXIV:96028-96514 - 71 1.17e-08 CCAACACAT GGGCGGTTAGTGTAGTGGTTA TCATCCCACC chrV:250073-250579 + 10 2.14e-08 AGTTGTACT GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrIV:520680-521216 + 74 2.14e-08 TCCATTTTAG GGTCCTATAGTGTAGTGGTTA TCACTT chrXII:448482-448987 - 17 2.14e-08 AAGAAGTTCC GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrVIII:134062-134604 + 38 2.14e-08 AGTAAGTTCC GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrXIII:808033-808596 - 33 2.14e-08 AGAAGAAAAA GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrIV:644974-645439 - 48 2.14e-08 CAGTTGTTAC GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrXVI:571973-572565 + 50 2.40e-08 ACAATACTTC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXV:281865-282426 + 69 2.40e-08 ACATGAAAGC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXV:226415-226888 - 60 2.40e-08 AAGAAATTCA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrX:531578-531678 + 20 2.40e-08 CAATTAGTGA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrVII:845417-845908 + 37 2.40e-08 TAAATAACAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXVI:775607-776078 - 24 2.40e-08 TAATTCAAAA GCTCGTATGGCGCAGTGGTAG CGCAGCAGAT chrIII:142500-143015 - 44 2.40e-08 AAGATTACTA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXVI:435631-436257 - 50 2.40e-08 TACAACAAAA GCTCGTATGGCGCAGTGGTAG CGCAGCAGAT chrVII:930745-931292 - 35 2.40e-08 TAATCAGTAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrIV:83334-83806 + 28 2.40e-08 AGTTCACTTA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXIII:183707-184166 - 62 2.40e-08 AATAAAGATC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrVIII:115943-116424 - 26 3.36e-08 CACTATTAGA GCTTCTATGGCCAAGTTGGTA AGGCGCCACA chrII:266142-266694 + 10 3.36e-08 TCAAAAACT GCTTCTATGGCCAAGTTGGTA AGGCGCCACA chrX:58899-58999 - 62 3.36e-08 TAAAATAGAA GCTTCTATGGCCAAGTTGGTA AGGCGCCACA chrXV:113554-114115 + 18 3.36e-08 CAGAGATTTA GCTTCTATGGCCAAGTTGGTA AGGCGCCACA chrVII:405257-405765 + 9 3.74e-08 AAACAGTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrII:405571-406193 + 46 3.74e-08 ACAAATAGTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrV:138378-139013 + 21 3.74e-08 AATAAATAAT GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrVII:828484-829037 - 64 3.74e-08 ACAAACAGTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrVII:736107-736672 + 1 3.74e-08 . GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrVII:857228-857690 - 62 6.29e-08 ACAAATAAGT GGTTGTTTGGCCGAGCGGTCT AAGGCGCCTG chrIV:1461520-1462114 - 42 6.29e-08 ACAAATAAGT GGTTGTTTGGCCGAGCGGTCT AAGGCGCCTG chrXII:628147-628702 + 9 6.29e-08 AAATAAGT GGTTGTTTGGCCGAGCGGTCT AAGGCGCCTG chrIV:1256877-1257329 - 6 6.29e-08 GATCTTCTTA GCGAAAGTGGTTCAGTGGTTA GAATT chrVII:422865-423367 + 26 6.29e-08 ACAGATAAGT GGTTGTTTGGCCGAGCGGTCT AAGGCGCCTG chrVII:205254-205777 + 56 6.29e-08 ACAAATAAGT GGTTGTTTGGCCGAGCGGTCT AAGGCGCCTG chrII:326591-327127 - 36 1.02e-07 TCGAGTTCCG GGTCCAATGGTCCAGTGGTTC AAGACGTCGC chrV:130861-131378 - 64 1.02e-07 ATAATTAAGA GGTTTTATAGTGTAGTGGTTA TCACTTTCGG chrXIV:631676-632171 - 24 1.12e-07 AACTTCTACC GGGCGTGTGGTCTAGAGGTAT GATTCTCGCT chrV:135160-135762 - 66 1.76e-07 CAAGAAAAAA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrVII:185488-185988 - 78 1.76e-07 TA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrIX:300054-300580 - 13 1.76e-07 CAACGAAATA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrVII:876128-876734 + 13 1.76e-07 TAATAGAATA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrVI:226505-226954 - 61 1.76e-07 AGATTAAAAT GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrIV:519509-520032 + 23 2.48e-07 GTGATTTTAC GGAGGGTTGGCCGAGTGGTCT AAGGCGGCAG chrII:347358-347916 + 16 2.48e-07 TCATTTATAC GGAGGGTTGGCCGAGTGGTCT AAGGCGGCAG chrX:424290-424390 - 25 2.48e-07 TAAATAAGAT GGAGGGTTGGCCGAGTGGTCT AAGGCGGCAG chrXII:975816-976301 - 28 2.69e-07 GGAAATAAAA GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrVI:137240-137816 - 61 2.69e-07 AAAAGTGACT GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrIII:127521-127924 + 44 2.69e-07 AAGATAAAAT GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrXV:228054-228607 + 51 2.69e-07 TAAAATATTA GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrXI:74380-74956 + 6 2.69e-07 AATTA GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrVIII:466714-467277 + 45 3.16e-07 TGTATTTTTA GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrVII:319566-320077 + 10 6.74e-07 AAGAAATTA GCCATCTTAGTATAGTGGTTA GTACACATCG chrVII:110405-110943 - 52 6.74e-07 ATAATTACCT GCCATCTTAGTATAGTGGTTA GTACACATCG chrXI:313238-313730 - 18 6.74e-07 ACAGTTGTTT GCCATCTTAGTATAGTGGTTA GTACACATCG chrVIII:237661-238221 - 28 8.90e-07 CAAATAGTAA GCGGATTTAGCTCAGTTGGGA GAGCGCCAGA chrVIII:358287-358828 - 42 8.90e-07 CAAATAGTAA GCGGATTTAGCTCAGTTGGGA GAGCGCCAGA chrII:36201-36617 + 39 8.90e-07 TTAGTTGTAA GCGGATTTAGCTCAGTTGGGA GAGCGCCAGA chrXVI:559968-560561 - 55 8.90e-07 TAGAAATTGA GCGGATTTAGCTCAGTTGGGA GAGCGCCAGA chrXIII:352036-352490 + 67 8.90e-07 ATGAATATAA GCGGATTTAGCTCAGTTGGGA GAGCGCCAGA chrXIII:572651-573239 - 40 9.53e-07 ATAACAGACA GCTTCAGTAGCTCAGTAGGAA GAGCGTCAGT chrX:422653-422753 + 28 9.53e-07 TCCTTTGTAT GCTTCAGTAGCTCAGTAGGAA GAGCGTCAGT chrX:390868-390968 - 52 9.53e-07 AAGAAATAGT GCTTCAGTAGCTCAGTAGGAA GAGCGTCAGT chrV:492145-492634 - 65 1.41e-06 GAACATCCTA TTCCTCGTGGCCCAATGGTCA CGGCGTCTGG chrXI:490706-491213 + 59 1.41e-06 ATAATTCTTG TTCCTCGTGGCCCAATGGTCA CGGCGTCTGG chrXV:438368-438973 + 23 2.27e-06 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTA GAGCGTTCGG chrVII:115250-115780 + 23 2.27e-06 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTA GAGCGTTCGG chrIV:1075285-1075746 - 59 4.56e-06 CCGTAATATT GTTCCAATAGTGTAGCGGCTA TCACGTTGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYDTGGYCYAGTGGKTW MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVI:204752-205200 1.3e-10 49_[-1]_30 chrXI:219671-220138 1.3e-10 40_[+1]_39 chrXI:517783-518195 1.3e-10 48_[+1]_31 chrXVI:856676-857133 1.3e-10 47_[+1]_32 chrIV:410166-410592 1.3e-10 49_[+1]_30 chrIX:210434-210960 3.4e-10 17_[+1]_62 chrV:551102-551581 3.4e-10 46_[-1]_33 chrVII:738850-739369 3.4e-10 62_[+1]_17 chrXII:1051829-1052378 3.4e-10 70_[-1]_9 chrXIV:569684-570131 3.4e-10 62_[-1]_17 chrIV:667776-668300 3.4e-10 71_[-1]_8 chrV:443002-443562 3.4e-10 22_[-1]_57 chrXVI:819239-819793 3.4e-10 62_[+1]_17 chrXVI:880089-880592 3.4e-10 58_[-1]_21 chrIX:183229-183727 3.4e-10 64_[-1]_15 chrVIII:388721-389233 5e-10 47_[-1]_32 chrXII:92284-92854 5e-10 28_[+1]_51 chrVI:101132-101671 5e-10 24_[+1]_55 chrXV:464184-464738 5e-10 38_[+1]_41 chrI:138918-139440 5e-10 22_[+1]_57 chrXIV:546859-547383 5e-10 22_[+1]_57 chrXV:300818-301457 5e-10 9_[+1]_70 chrXIV:567843-568485 5e-10 [+1]_79 chrV:311843-312354 8.5e-10 26_[-1]_53 chrVII:794164-794663 8.5e-10 53_[+1]_26 chrXIII:259000-259515 1.2e-09 11_[-1]_68 chrIV:437481-438034 1.2e-09 64_[+1]_15 chrX:523789-523889 1.2e-09 63_[-1]_16 chrV:86372-86866 1.2e-09 34_[+1]_45 chrVIII:132837-133409 1.2e-09 13_[-1]_66 chrIV:1305409-1305924 1.2e-09 13_[+1]_66 chrIV:980798-981310 1.2e-09 30_[-1]_49 chrXII:592345-592908 1.6e-09 22_[-1]_57 chrIII:227672-228212 2.6e-09 49_[+1]_30 chrXVI:689223-689885 2.6e-09 60_[+1]_19 chrXI:46516-47015 4e-09 70_[-1]_9 chrIV:1150612-1151212 5.3e-09 58_[-1]_21 chrXII:784143-784600 5.3e-09 32_[+1]_47 chrVI:191280-191875 5.3e-09 65_[-1]_14 chrVII:73648-74163 7e-09 26_[-1]_53 chrXIII:420350-420901 7e-09 65_[-1]_14 chrVII:412115-412633 7e-09 22_[-1]_57 chrXIII:372292-372796 7e-09 3_[-1]_76 chrV:438471-438941 7e-09 43_[+1]_36 chrVIII:85139-85616 7e-09 23_[-1]_56 chrXV:594150-594732 8e-09 13_[-1]_66 chrXV:110775-111300 1.2e-08 25_[-1]_54 chrXIV:96028-96514 1.2e-08 70_[-1]_9 chrV:250073-250579 2.1e-08 9_[+1]_70 chrIV:520680-521216 2.1e-08 73_[+1]_6 chrXII:448482-448987 2.1e-08 16_[-1]_63 chrVIII:134062-134604 2.1e-08 37_[+1]_42 chrXIII:808033-808596 2.1e-08 32_[-1]_47 chrIV:644974-645439 2.1e-08 47_[-1]_32 chrXVI:571973-572565 2.4e-08 49_[+1]_30 chrXV:281865-282426 2.4e-08 68_[+1]_11 chrXV:226415-226888 2.4e-08 59_[-1]_20 chrX:531578-531678 2.4e-08 19_[+1]_60 chrVII:845417-845908 2.4e-08 36_[+1]_43 chrXVI:775607-776078 2.4e-08 23_[-1]_56 chrIII:142500-143015 2.4e-08 43_[-1]_36 chrXVI:435631-436257 2.4e-08 49_[-1]_30 chrVII:930745-931292 2.4e-08 34_[-1]_45 chrIV:83334-83806 2.4e-08 27_[+1]_52 chrXIII:183707-184166 2.4e-08 61_[-1]_18 chrVIII:115943-116424 3.4e-08 25_[-1]_54 chrII:266142-266694 3.4e-08 9_[+1]_70 chrX:58899-58999 3.4e-08 61_[-1]_18 chrXV:113554-114115 3.4e-08 17_[+1]_62 chrVII:405257-405765 3.7e-08 8_[+1]_71 chrII:405571-406193 3.7e-08 45_[+1]_34 chrV:138378-139013 3.7e-08 20_[+1]_59 chrVII:828484-829037 3.7e-08 63_[-1]_16 chrVII:736107-736672 3.7e-08 [+1]_79 chrVII:857228-857690 6.3e-08 61_[-1]_18 chrIV:1461520-1462114 6.3e-08 41_[-1]_38 chrXII:628147-628702 6.3e-08 8_[+1]_71 chrIV:1256877-1257329 6.3e-08 5_[-1]_74 chrVII:422865-423367 6.3e-08 25_[+1]_54 chrVII:205254-205777 6.3e-08 55_[+1]_24 chrII:326591-327127 1e-07 35_[-1]_44 chrV:130861-131378 1e-07 63_[-1]_16 chrXIV:631676-632171 1.1e-07 23_[-1]_56 chrV:135160-135762 1.8e-07 65_[-1]_14 chrVII:185488-185988 1.8e-07 77_[-1]_2 chrIX:300054-300580 1.8e-07 12_[-1]_67 chrVII:876128-876734 1.8e-07 12_[+1]_67 chrVI:226505-226954 1.8e-07 60_[-1]_19 chrIV:519509-520032 2.5e-07 22_[+1]_57 chrII:347358-347916 2.5e-07 15_[+1]_64 chrX:424290-424390 2.5e-07 24_[-1]_55 chrXII:975816-976301 2.7e-07 27_[-1]_52 chrVI:137240-137816 2.7e-07 60_[-1]_19 chrIII:127521-127924 2.7e-07 43_[+1]_36 chrXV:228054-228607 2.7e-07 50_[+1]_29 chrXI:74380-74956 2.7e-07 5_[+1]_74 chrVIII:466714-467277 3.2e-07 44_[+1]_35 chrVII:319566-320077 6.7e-07 9_[+1]_70 chrVII:110405-110943 6.7e-07 51_[-1]_28 chrXI:313238-313730 6.7e-07 17_[-1]_62 chrVIII:237661-238221 8.9e-07 27_[-1]_52 chrVIII:358287-358828 8.9e-07 41_[-1]_38 chrII:36201-36617 8.9e-07 38_[+1]_41 chrXVI:559968-560561 8.9e-07 54_[-1]_25 chrXIII:352036-352490 8.9e-07 66_[+1]_13 chrXIII:572651-573239 9.5e-07 39_[-1]_40 chrX:422653-422753 9.5e-07 27_[+1]_52 chrX:390868-390968 9.5e-07 51_[-1]_28 chrV:492145-492634 1.4e-06 64_[-1]_15 chrXI:490706-491213 1.4e-06 58_[+1]_21 chrXV:438368-438973 2.3e-06 22_[+1]_57 chrVII:115250-115780 2.3e-06 22_[+1]_57 chrIV:1075285-1075746 4.6e-06 58_[-1]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYDTGGYCYAGTGGKTW MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSBYNYDTGGYCYAGTGGKTW width=21 seqs=113 chrVI:204752-205200 ( 50) GGGCGTGTGGCGTAGTCGGTA 1 chrXI:219671-220138 ( 41) GGGCGTGTGGCGTAGTCGGTA 1 chrXI:517783-518195 ( 49) GGGCGTGTGGCGTAGTCGGTA 1 chrXVI:856676-857133 ( 48) GGGCGTGTGGCGTAGTCGGTA 1 chrIV:410166-410592 ( 50) GGGCGTGTGGCGTAGTCGGTA 1 chrIX:210434-210960 ( 18) GGTCTCTTGGCCCAGTTGGTT 1 chrV:551102-551581 ( 47) GGTCTCTTGGCCCAGTTGGTT 1 chrVII:738850-739369 ( 63) GGTCTCTTGGCCCAGTTGGTT 1 chrXII:1051829-1052378 ( 71) GGTCTCTTGGCCCAGTTGGTT 1 chrXIV:569684-570131 ( 63) GGTCTCTTGGCCCAGTTGGTT 1 chrIV:667776-668300 ( 72) GGTCTCTTGGCCCAGTTGGTT 1 chrV:443002-443562 ( 23) GGTCTCTTGGCCCAGTTGGTT 1 chrXVI:819239-819793 ( 63) GGTCTCTTGGCCCAGTTGGTT 1 chrXVI:880089-880592 ( 59) GGTCTCTTGGCCCAGTTGGTT 1 chrIX:183229-183727 ( 65) GGTCTCTTGGCCCAGTTGGTT 1 chrVIII:388721-389233 ( 48) GGGCGTGTGGTCTAGTGGTAT 1 chrXII:92284-92854 ( 29) GGGCGTGTGGTCTAGTGGTAT 1 chrVI:101132-101671 ( 25) GGGCGTGTGGTCTAGTGGTAT 1 chrXV:464184-464738 ( 39) GGGCGTGTGGTCTAGTGGTAT 1 chrI:138918-139440 ( 23) GGGCGTGTGGTCTAGTGGTAT 1 chrXIV:546859-547383 ( 23) GGGCGTGTGGTCTAGTGGTAT 1 chrXV:300818-301457 ( 10) GGGCGTGTGGTCTAGTGGTAT 1 chrXIV:567843-568485 ( 1) GGGCGTGTGGTCTAGTGGTAT 1 chrV:311843-312354 ( 27) GGGCACATGGCGCAGTTGGTA 1 chrVII:794164-794663 ( 54) GGGCACATGGCGCAGTTGGTA 1 chrXIII:259000-259515 ( 12) GGCAACTTGGCCGAGTGGTTA 1 chrIV:437481-438034 ( 65) GGCAACTTGGCCGAGTGGTTA 1 chrX:523789-523889 ( 64) GGCAACTTGGCCGAGTGGTTA 1 chrV:86372-86866 ( 35) GGCAACTTGGCCGAGTGGTTA 1 chrVIII:132837-133409 ( 14) GGCAACTTGGCCGAGTGGTTA 1 chrIV:1305409-1305924 ( 14) GGCAACTTGGCCGAGTGGTTA 1 chrIV:980798-981310 ( 31) GGCAACTTGGCCGAGTGGTTA 1 chrXII:592345-592908 ( 23) GGGAGTTTGGCCGAGTGGTTT 1 chrIII:227672-228212 ( 50) GGCACTATGGCCGAGTGGTTA 1 chrXVI:689223-689885 ( 61) GGCACTATGGCCGAGTGGTTA 1 chrXI:46516-47015 ( 71) GCCCTTTTGGCCAAGTGGTAA 1 chrIV:1150612-1151212 ( 59) GTCCCAGTGGCCGAGTGGTTA 1 chrXII:784143-784600 ( 33) GTCCCAGTGGCCGAGTGGTTA 1 chrVI:191280-191875 ( 66) GTCCCAGTGGCCGAGTGGTTA 1 chrVII:73648-74163 ( 27) GGTTTCGTGGTCTAGTCGGTT 1 chrXIII:420350-420901 ( 66) GGTTTCGTGGTCTAGTCGGTT 1 chrVII:412115-412633 ( 23) GGTTTCGTGGTCTAGTCGGTT 1 chrXIII:372292-372796 ( 4) GGTTTCGTGGTCTAGTCGGTT 1 chrV:438471-438941 ( 44) GGTTTCGTGGTCTAGTCGGTT 1 chrVIII:85139-85616 ( 24) GGTTTCGTGGTCTAGTCGGTT 1 chrXV:594150-594732 ( 14) GCGCAAGTGGTTCAGTGGTTA 1 chrXV:110775-111300 ( 26) GGGCGGTTAGTGTAGTGGTTA 1 chrXIV:96028-96514 ( 71) GGGCGGTTAGTGTAGTGGTTA 1 chrV:250073-250579 ( 10) GGTCCTATAGTGTAGTGGTTA 1 chrIV:520680-521216 ( 74) GGTCCTATAGTGTAGTGGTTA 1 chrXII:448482-448987 ( 17) GGTCCTATAGTGTAGTGGTTA 1 chrVIII:134062-134604 ( 38) GGTCCTATAGTGTAGTGGTTA 1 chrXIII:808033-808596 ( 33) GGTCCTATAGTGTAGTGGTTA 1 chrIV:644974-645439 ( 48) GGTCCTATAGTGTAGTGGTTA 1 chrXVI:571973-572565 ( 50) GCGCAAGTGGTTTAGTGGTAA 1 chrXV:281865-282426 ( 69) GCGCAAGTGGTTTAGTGGTAA 1 chrXV:226415-226888 ( 60) GCGCAAGTGGTTTAGTGGTAA 1 chrX:531578-531678 ( 20) GCGCAAGTGGTTTAGTGGTAA 1 chrVII:845417-845908 ( 37) GCGCAAGTGGTTTAGTGGTAA 1 chrXVI:775607-776078 ( 24) GCTCGTATGGCGCAGTGGTAG 1 chrIII:142500-143015 ( 44) GCGCAAGTGGTTTAGTGGTAA 1 chrXVI:435631-436257 ( 50) GCTCGTATGGCGCAGTGGTAG 1 chrVII:930745-931292 ( 35) GCGCAAGTGGTTTAGTGGTAA 1 chrIV:83334-83806 ( 28) GCGCAAGTGGTTTAGTGGTAA 1 chrXIII:183707-184166 ( 62) GCGCAAGTGGTTTAGTGGTAA 1 chrVIII:115943-116424 ( 26) GCTTCTATGGCCAAGTTGGTA 1 chrII:266142-266694 ( 10) GCTTCTATGGCCAAGTTGGTA 1 chrX:58899-58999 ( 62) GCTTCTATGGCCAAGTTGGTA 1 chrXV:113554-114115 ( 18) GCTTCTATGGCCAAGTTGGTA 1 chrVII:405257-405765 ( 9) GCTCGCGTGGCGTAATGGCAA 1 chrII:405571-406193 ( 46) GCTCGCGTGGCGTAATGGCAA 1 chrV:138378-139013 ( 21) GCTCGCGTGGCGTAATGGCAA 1 chrVII:828484-829037 ( 64) GCTCGCGTGGCGTAATGGCAA 1 chrVII:736107-736672 ( 1) GCTCGCGTGGCGTAATGGCAA 1 chrVII:857228-857690 ( 62) GGTTGTTTGGCCGAGCGGTCT 1 chrIV:1461520-1462114 ( 42) GGTTGTTTGGCCGAGCGGTCT 1 chrXII:628147-628702 ( 9) GGTTGTTTGGCCGAGCGGTCT 1 chrIV:1256877-1257329 ( 6) GCGAAAGTGGTTCAGTGGTTA 1 chrVII:422865-423367 ( 26) GGTTGTTTGGCCGAGCGGTCT 1 chrVII:205254-205777 ( 56) GGTTGTTTGGCCGAGCGGTCT 1 chrII:326591-327127 ( 36) GGTCCAATGGTCCAGTGGTTC 1 chrV:130861-131378 ( 64) GGTTTTATAGTGTAGTGGTTA 1 chrXIV:631676-632171 ( 24) GGGCGTGTGGTCTAGAGGTAT 1 chrV:135160-135762 ( 66) GCCTTGTTGGCGCAATCGGTA 1 chrVII:185488-185988 ( 78) GCCTTGTTGGCGCAATCGGTA 1 chrIX:300054-300580 ( 13) GCCTTGTTGGCGCAATCGGTA 1 chrVII:876128-876734 ( 13) GCCTTGTTGGCGCAATCGGTA 1 chrVI:226505-226954 ( 61) GCCTTGTTGGCGCAATCGGTA 1 chrIV:519509-520032 ( 23) GGAGGGTTGGCCGAGTGGTCT 1 chrII:347358-347916 ( 16) GGAGGGTTGGCCGAGTGGTCT 1 chrX:424290-424390 ( 25) GGAGGGTTGGCCGAGTGGTCT 1 chrXII:975816-976301 ( 28) GACTCCATGGCCAAGTTGGTT 1 chrVI:137240-137816 ( 61) GACTCCATGGCCAAGTTGGTT 1 chrIII:127521-127924 ( 44) GACTCCATGGCCAAGTTGGTT 1 chrXV:228054-228607 ( 51) GACTCCATGGCCAAGTTGGTT 1 chrXI:74380-74956 ( 6) GACTCCATGGCCAAGTTGGTT 1 chrVIII:466714-467277 ( 45) GCCTCCTTAGCTTAGTGGTAG 1 chrVII:319566-320077 ( 10) GCCATCTTAGTATAGTGGTTA 1 chrVII:110405-110943 ( 52) GCCATCTTAGTATAGTGGTTA 1 chrXI:313238-313730 ( 18) GCCATCTTAGTATAGTGGTTA 1 chrVIII:237661-238221 ( 28) GCGGATTTAGCTCAGTTGGGA 1 chrVIII:358287-358828 ( 42) GCGGATTTAGCTCAGTTGGGA 1 chrII:36201-36617 ( 39) GCGGATTTAGCTCAGTTGGGA 1 chrXVI:559968-560561 ( 55) GCGGATTTAGCTCAGTTGGGA 1 chrXIII:352036-352490 ( 67) GCGGATTTAGCTCAGTTGGGA 1 chrXIII:572651-573239 ( 40) GCTTCAGTAGCTCAGTAGGAA 1 chrX:422653-422753 ( 28) GCTTCAGTAGCTCAGTAGGAA 1 chrX:390868-390968 ( 52) GCTTCAGTAGCTCAGTAGGAA 1 chrV:492145-492634 ( 65) TTCCTCGTGGCCCAATGGTCA 1 chrXI:490706-491213 ( 59) TTCCTCGTGGCCCAATGGTCA 1 chrXV:438368-438973 ( 23) TCCTTGTTAGCTCAGTTGGTA 1 chrVII:115250-115780 ( 23) TCCTTGTTAGCTCAGTTGGTA 1 chrIV:1075285-1075746 ( 59) GTTCCAATAGTGTAGCGGCTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYDTGGYCYAGTGGKTW MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 45680 bayes= 7.64299 E= 1.8e-329 -1346 -1346 244 -319 -286 107 158 -260 -360 63 80 27 -138 156 -133 -19 -54 37 67 -28 -94 103 -74 17 -60 -1346 113 30 -1346 -1346 -1346 163 -60 -1346 215 -1346 -1346 -1346 249 -1346 -1346 186 -1346 13 -360 156 53 -73 -186 76 7 40 163 -1346 -1346 -1346 -160 -1346 233 -1346 -518 -174 -1346 154 -360 -33 172 -38 -1346 -1346 249 -1346 -1346 -174 123 72 -28 -100 -200 90 94 -432 -274 10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYDTGGYCYAGTGGKTW MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 113 E= 1.8e-329 0.000000 0.000000 0.964602 0.035398 0.044248 0.371681 0.530973 0.053097 0.026549 0.274336 0.309735 0.389381 0.123894 0.522124 0.070796 0.283186 0.221239 0.230088 0.283186 0.265487 0.168142 0.362832 0.106195 0.362832 0.212389 0.000000 0.389381 0.398230 0.000000 0.000000 0.000000 1.000000 0.212389 0.000000 0.787611 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.646018 0.000000 0.353982 0.026549 0.522124 0.256637 0.194690 0.088496 0.300885 0.185841 0.424779 1.000000 0.000000 0.000000 0.000000 0.106195 0.000000 0.893805 0.000000 0.008850 0.053097 0.000000 0.938053 0.026549 0.141593 0.584071 0.247788 0.000000 0.000000 1.000000 0.000000 0.000000 0.053097 0.415929 0.530973 0.265487 0.088496 0.044248 0.601770 0.619469 0.008850 0.026549 0.345133 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYDTGGYCYAGTGGKTW MEME-1 regular expression -------------------------------------------------------------------------------- G[GC][TGC][CT][GTCA][CT][TGA]T[GA]G[CT][CG][TC]AGT[GT]G[TG][TA][AT] -------------------------------------------------------------------------------- Time 321.66 secs. ******************************************************************************** ******************************************************************************** MOTIF TAAYCNKRRGRTCMBSGGTTCGAYYCCSV MEME-2 width = 29 sites = 72 llr = 1577 E-value = 7.5e-355 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAAYCNKRRGRTCMBSGGTTCGAYYCCSV MEME-2 Description -------------------------------------------------------------------------------- Simplified A 168::2136252:4::1::::2a2::::2 pos.-specific C 221473:::1:184341:::a::35a855 probability G :1113355475::2458a:::8:1::143 matrix T 71:5:231:1:72:3:::aa:::45:2:: bits 2.5 * * * 2.2 * * * 2.0 * * * 1.7 * **** * Relative 1.5 * * ******* * Entropy 1.2 * * ******* *** (31.6 bits) 1.0 * * ** * ******** **** 0.7 * * *** * ******** ***** 0.5 ***** ***************** ***** 0.2 *********************** ***** 0.0 ----------------------------- Multilevel TAATCGGGAGGTCCGGGGTTCGATTCCCC consensus CC CGCTAG AATACC CC GG sequence T T A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCNKRRGRTCMBSGGTTCGAYYCCSV MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrIX:210434-210960 + 54 2.66e-15 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrV:551102-551581 - 3 2.66e-15 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGC TA chrXII:734620-735101 + 28 2.66e-15 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrXII:1051829-1052378 - 27 2.66e-15 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrXIV:569684-570131 - 19 2.66e-15 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrIV:667776-668300 - 28 2.66e-15 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrII:197227-197931 + 1 2.66e-15 . TAACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrXVI:880089-880592 - 15 2.66e-15 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrIX:183229-183727 - 21 2.66e-15 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAC chrII:644971-645440 + 46 5.16e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrVII:328260-328971 + 52 5.16e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrV:487130-487604 - 23 5.16e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrX:115745-115845 - 16 5.16e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrV:354659-355309 + 34 5.16e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrVII:401342-401828 - 1 5.16e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCC chrVII:541546-542190 + 66 5.16e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCC GTATCG chrV:135160-135762 - 23 1.17e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrVII:185488-185988 - 35 1.17e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTA chrVII:876128-876734 + 48 1.17e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrXVI:581861-582417 + 8 1.17e-12 TGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrVI:226505-226954 - 18 1.17e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrXV:226415-226888 - 19 2.63e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGG GCTTGCGCAA chrX:531578-531678 + 53 2.63e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGG GCTTGCGCAG chrVII:845417-845908 + 70 2.63e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGG GC chrIII:142500-143015 - 3 2.63e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGG GC chrIV:83334-83806 + 61 2.63e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGG GCTTGCGCAA chrXIII:183707-184166 - 21 2.63e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGG GCTTGCGCAT chrX:374201-374301 - 68 7.24e-12 CTTC TAATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGC chrVII:405257-405765 + 43 7.24e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGC chrV:138378-139013 + 55 7.24e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGT chrVII:828484-829037 - 22 7.24e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGC chrVII:736107-736672 + 35 7.24e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGT chrXI:46516-47015 - 29 7.24e-12 ATCGCACTCG TAATGCGGGGATCGTGGGTTCAATTCCCA CAGAGGGCAT chrV:250073-250579 + 44 1.17e-11 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAATCCGG GTAGGACCTT chrVIII:134062-134604 + 72 1.17e-11 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAATCCGG chrIV:644974-645439 - 6 1.17e-11 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAATCCGG GTAGG chrI:165988-166693 + 12 2.32e-11 GCTTCCCTTG CAAGGAAGAGGTCATCGGTTCGATTCCGG TTGCGTCCAA chrV:130861-131378 - 22 3.23e-11 CTTTCGGTTT TGATCCGAACAACCCCGGTTCGAATCCGG GTAAGACCTA chrIX:174802-175384 + 23 5.50e-11 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAA chrII:266142-266694 + 45 5.50e-11 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAT chrX:58899-58999 - 19 5.50e-11 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAT chrXV:113554-114115 + 53 5.50e-11 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAT chrXVI:768934-769516 - 41 1.36e-10 TTAAGCAAGG ATACCGAAATGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrXI:578758-579290 + 49 1.36e-10 TTAAGCAAGG ATACCGAAATGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrXII:875196-875723 + 25 1.36e-10 TTAAGCAAGG ATACCGAAATGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrXIII:168538-169139 + 58 1.81e-10 TACCACTACG AAATCTTGAGATCGGGCGTTCGACTCGCC CCCGGGAGAT chrX:354018-354118 + 28 1.81e-10 TACCACTACG AAATCTTGAGATCGGGCGTTCGACTCGCC CCCGGGAGAT chrVI:210417-210920 - 10 1.81e-10 TACCACTACG AAATCTTGAGATCGGGCGTTCGACTCGCC CCCGGGAGA chrIV:946067-946660 + 50 1.81e-10 TATCACTACG AAATCTTGAGATCGGGCGTTCGACTCGCC CCCGGGAGAT chrX:422653-422753 + 63 1.99e-10 GTCAGTCTCA TAATCTGAAGGTCGAGAGTTCGAACCTCC CCTGGAGCA chrX:390868-390968 - 9 1.99e-10 GTCAGTCTCA TAATCTGAAGGTCGAGAGTTCGAACCTCC CCTGGAGC chrIV:1175607-1176191 + 15 1.99e-10 GTCAGTCTCA TAATCTGAAGGTCGAGAGTTCGAACCTCC CCTGGAGCAT chrXIV:96028-96514 - 29 2.63e-10 TCCCACCCTT CCAAGGTGGGGACACGGGTTCGATTCTCG TACCGCTCAA chrIV:488518-489101 - 47 6.96e-10 GTCGCCTTTA CACGGCGAAGATCCCGAGTTCGAACCTCG GTTGGATCAG chrIV:1075285-1075746 - 16 8.94e-10 GTTGCCTTCA CACGGCAAAGGTCCCGAGTTCGATCCTCG GTTGGAACAT chrXIV:567843-568485 + 66 1.14e-09 GAAGACAAAG CATGCGAGAGGCCCTGGGTTCAATTCCCA GCTCGC chrVI:204752-205200 - 7 1.57e-09 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGATTCCGG ACTCGT chrXIII:420350-420901 - 22 1.57e-09 ATCTGCTTAA CACGCAGAACGTCCCCAGTTCGATCCTGG GCGAAATCAT chrXI:379473-380015 + 22 1.57e-09 ATCTGCTTAA CACGCAGAACGTCCCCAGTTCGATCCTGG GCGAAATCAA chrVI:137240-137816 - 17 2.69e-09 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrV:99879-100435 + 60 2.69e-09 GCAGGGCTCA TAACCCTGATGTCCTCGGATCGAAACCGA GCGGCGCTAA chrXI:74380-74956 + 42 2.69e-09 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAACCCTCA CTGGGGTCGC chrX:517631-517731 - 6 2.69e-09 GCAGGGCTCA TAACCCTGATGTCCTCGGATCGAAACCGA GCGGC chrX:541260-541360 + 71 7.30e-09 TGGGCGCTTG TCGCGTGCCAGATCGGGGTTCAATTCCCC G chrVII:544308-544875 - 45 7.30e-09 TGGGCGCTTG TCGCGTGCCAGATCGGGGTTCAATTCCCC GTCGCGGAGA chrIX:324006-324579 - 70 7.30e-09 TG TCGCGTGCCAGATCGGGGTTCAATTCCCC GTCGCGGAGA chrXVI:55839-56566 - 26 1.16e-08 AATAAGATTG CAATCGAAGGGTTGCAGGTTCAATTCCTG TCCGTTTCAA chrIV:1095098-1095681 - 40 1.24e-08 TTTGGTCAAG ATATCTGGAGGTCCTGTGTTCGATCCACA GAGTTCGCAT chrXVI:435631-436257 - 8 3.26e-08 AGCAGATTGC AAATCTGTTGGTCCTTAGTTCGATCCTGA GTGCGAG chrV:492145-492634 - 22 4.09e-08 GTCTGGCTAC GAACCAGAAGATTCCAGGTTCAAGTCCTG GCGGGGAAGG chrVII:319566-320077 + 44 8.64e-08 CACATCGTTG TGGCCGATGAAACCCTGGTTCGATTCTAG GAGATGGCAT chrVII:110405-110943 - 10 8.64e-08 CACATCGTTG TGGCCGATGAAACCCTGGTTCGATTCTAG GAGATGGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCNKRRGRTCMBSGGTTCGAYYCCSV MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIX:210434-210960 2.7e-15 53_[+2]_18 chrV:551102-551581 2.7e-15 2_[-2]_69 chrXII:734620-735101 2.7e-15 27_[+2]_44 chrXII:1051829-1052378 2.7e-15 26_[-2]_45 chrXIV:569684-570131 2.7e-15 18_[-2]_53 chrIV:667776-668300 2.7e-15 27_[-2]_44 chrII:197227-197931 2.7e-15 [+2]_71 chrXVI:880089-880592 2.7e-15 14_[-2]_57 chrIX:183229-183727 2.7e-15 20_[-2]_51 chrII:644971-645440 5.2e-14 45_[+2]_26 chrVII:328260-328971 5.2e-14 51_[+2]_20 chrV:487130-487604 5.2e-14 22_[-2]_49 chrX:115745-115845 5.2e-14 15_[-2]_56 chrV:354659-355309 5.2e-14 33_[+2]_38 chrVII:401342-401828 5.2e-14 [-2]_71 chrVII:541546-542190 5.2e-14 65_[+2]_6 chrV:135160-135762 1.2e-12 22_[-2]_49 chrVII:185488-185988 1.2e-12 34_[-2]_37 chrVII:876128-876734 1.2e-12 47_[+2]_24 chrXVI:581861-582417 1.2e-12 7_[+2]_64 chrVI:226505-226954 1.2e-12 17_[-2]_54 chrXV:226415-226888 2.6e-12 18_[-2]_53 chrX:531578-531678 2.6e-12 52_[+2]_19 chrVII:845417-845908 2.6e-12 69_[+2]_2 chrIII:142500-143015 2.6e-12 2_[-2]_69 chrIV:83334-83806 2.6e-12 60_[+2]_11 chrXIII:183707-184166 2.6e-12 20_[-2]_51 chrX:374201-374301 7.2e-12 67_[-2]_4 chrVII:405257-405765 7.2e-12 42_[+2]_29 chrV:138378-139013 7.2e-12 54_[+2]_17 chrVII:828484-829037 7.2e-12 21_[-2]_50 chrVII:736107-736672 7.2e-12 34_[+2]_37 chrXI:46516-47015 7.2e-12 28_[-2]_43 chrV:250073-250579 1.2e-11 43_[+2]_28 chrVIII:134062-134604 1.2e-11 71_[+2] chrIV:644974-645439 1.2e-11 5_[-2]_66 chrI:165988-166693 2.3e-11 11_[+2]_60 chrV:130861-131378 3.2e-11 21_[-2]_50 chrIX:174802-175384 5.5e-11 22_[+2]_49 chrII:266142-266694 5.5e-11 44_[+2]_27 chrX:58899-58999 5.5e-11 18_[-2]_53 chrXV:113554-114115 5.5e-11 52_[+2]_19 chrXVI:768934-769516 1.4e-10 40_[-2]_31 chrXI:578758-579290 1.4e-10 48_[+2]_23 chrXII:875196-875723 1.4e-10 24_[+2]_47 chrXIII:168538-169139 1.8e-10 57_[+2]_14 chrX:354018-354118 1.8e-10 27_[+2]_44 chrVI:210417-210920 1.8e-10 9_[-2]_62 chrIV:946067-946660 1.8e-10 49_[+2]_22 chrX:422653-422753 2e-10 62_[+2]_9 chrX:390868-390968 2e-10 8_[-2]_63 chrIV:1175607-1176191 2e-10 14_[+2]_57 chrXIV:96028-96514 2.6e-10 28_[-2]_43 chrIV:488518-489101 7e-10 46_[-2]_25 chrIV:1075285-1075746 8.9e-10 15_[-2]_56 chrXIV:567843-568485 1.1e-09 65_[+2]_6 chrVI:204752-205200 1.6e-09 6_[-2]_65 chrXIII:420350-420901 1.6e-09 21_[-2]_50 chrXI:379473-380015 1.6e-09 21_[+2]_50 chrVI:137240-137816 2.7e-09 16_[-2]_55 chrV:99879-100435 2.7e-09 59_[+2]_12 chrXI:74380-74956 2.7e-09 41_[+2]_30 chrX:517631-517731 2.7e-09 5_[-2]_66 chrX:541260-541360 7.3e-09 70_[+2]_1 chrVII:544308-544875 7.3e-09 44_[-2]_27 chrIX:324006-324579 7.3e-09 69_[-2]_2 chrXVI:55839-56566 1.2e-08 25_[-2]_46 chrIV:1095098-1095681 1.2e-08 39_[-2]_32 chrXVI:435631-436257 3.3e-08 7_[-2]_64 chrV:492145-492634 4.1e-08 21_[-2]_50 chrVII:319566-320077 8.6e-08 43_[+2]_28 chrVII:110405-110943 8.6e-08 9_[-2]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCNKRRGRTCMBSGGTTCGAYYCCSV MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAAYCNKRRGRTCMBSGGTTCGAYYCCSV width=29 seqs=72 chrIX:210434-210960 ( 54) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrV:551102-551581 ( 3) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrXII:734620-735101 ( 28) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrXII:1051829-1052378 ( 27) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrXIV:569684-570131 ( 19) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrIV:667776-668300 ( 28) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrII:197227-197931 ( 1) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrXVI:880089-880592 ( 15) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrIX:183229-183727 ( 21) TAACGCGGGGATCAGCGGTTCGATCCCGC 1 chrII:644971-645440 ( 46) TCACCGTGGAGACCGGGGTTCGACTCCCC 1 chrVII:328260-328971 ( 52) TCACCGTGGAGACCGGGGTTCGACTCCCC 1 chrV:487130-487604 ( 23) TCACCGTGGAGACCGGGGTTCGACTCCCC 1 chrX:115745-115845 ( 16) TCACCGTGGAGACCGGGGTTCGACTCCCC 1 chrV:354659-355309 ( 34) TCACCGTGGAGACCGGGGTTCGACTCCCC 1 chrVII:401342-401828 ( 1) TCACCGTGGAGACCGGGGTTCGACTCCCC 1 chrVII:541546-542190 ( 66) TCACCGTGGAGACCGGGGTTCGACTCCCC 1 chrV:135160-135762 ( 23) TAATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrVII:185488-185988 ( 35) TAATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrVII:876128-876734 ( 48) TAATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrXVI:581861-582417 ( 8) TAATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrVI:226505-226954 ( 18) TAATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrXV:226415-226888 ( 19) CCATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrX:531578-531678 ( 53) CCATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrVII:845417-845908 ( 70) CCATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrIII:142500-143015 ( 3) CCATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrIV:83334-83806 ( 61) CCATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrXIII:183707-184166 ( 21) CCATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrX:374201-374301 ( 68) TAATCAGAAGATTATGGGTTCGACCCCCA 1 chrVII:405257-405765 ( 43) TAATCAGAAGATTATGGGTTCGACCCCCA 1 chrV:138378-139013 ( 55) TAATCAGAAGATTATGGGTTCGACCCCCA 1 chrVII:828484-829037 ( 22) TAATCAGAAGATTATGGGTTCGACCCCCA 1 chrVII:736107-736672 ( 35) TAATCAGAAGATTATGGGTTCGACCCCCA 1 chrXI:46516-47015 ( 29) TAATGCGGGGATCGTGGGTTCAATTCCCA 1 chrV:250073-250579 ( 44) TGATCCGGACAACCCCGGTTCGAATCCGG 1 chrVIII:134062-134604 ( 72) TGATCCGGACAACCCCGGTTCGAATCCGG 1 chrIV:644974-645439 ( 6) TGATCCGGACAACCCCGGTTCGAATCCGG 1 chrI:165988-166693 ( 12) CAAGGAAGAGGTCATCGGTTCGATTCCGG 1 chrV:130861-131378 ( 22) TGATCCGAACAACCCCGGTTCGAATCCGG 1 chrIX:174802-175384 ( 23) TAATGTGGAGATCATCGGTTCAAATCCGA 1 chrII:266142-266694 ( 45) TAATGTGGAGATCATCGGTTCAAATCCGA 1 chrX:58899-58999 ( 19) TAATGTGGAGATCATCGGTTCAAATCCGA 1 chrXV:113554-114115 ( 53) TAATGTGGAGATCATCGGTTCAAATCCGA 1 chrXVI:768934-769516 ( 41) ATACCGAAATGTCAGGGGTTCGAGCCCCC 1 chrXI:578758-579290 ( 49) ATACCGAAATGTCAGGGGTTCGAGCCCCC 1 chrXII:875196-875723 ( 25) ATACCGAAATGTCAGGGGTTCGAGCCCCC 1 chrXIII:168538-169139 ( 58) AAATCTTGAGATCGGGCGTTCGACTCGCC 1 chrX:354018-354118 ( 28) AAATCTTGAGATCGGGCGTTCGACTCGCC 1 chrVI:210417-210920 ( 10) AAATCTTGAGATCGGGCGTTCGACTCGCC 1 chrIV:946067-946660 ( 50) AAATCTTGAGATCGGGCGTTCGACTCGCC 1 chrX:422653-422753 ( 63) TAATCTGAAGGTCGAGAGTTCGAACCTCC 1 chrX:390868-390968 ( 9) TAATCTGAAGGTCGAGAGTTCGAACCTCC 1 chrIV:1175607-1176191 ( 15) TAATCTGAAGGTCGAGAGTTCGAACCTCC 1 chrXIV:96028-96514 ( 29) CCAAGGTGGGGACACGGGTTCGATTCTCG 1 chrIV:488518-489101 ( 47) CACGGCGAAGATCCCGAGTTCGAACCTCG 1 chrIV:1075285-1075746 ( 16) CACGGCAAAGGTCCCGAGTTCGATCCTCG 1 chrXIV:567843-568485 ( 66) CATGCGAGAGGCCCTGGGTTCAATTCCCA 1 chrVI:204752-205200 ( 7) CATGGGAGAGGTCTCCGGTTCGATTCCGG 1 chrXIII:420350-420901 ( 22) CACGCAGAACGTCCCCAGTTCGATCCTGG 1 chrXI:379473-380015 ( 22) CACGCAGAACGTCCCCAGTTCGATCCTGG 1 chrVI:137240-137816 ( 17) TAATCGCAAGATCGTGAGTTCAACCCTCA 1 chrV:99879-100435 ( 60) TAACCCTGATGTCCTCGGATCGAAACCGA 1 chrXI:74380-74956 ( 42) TAATCGCAAGATCGTGAGTTCAACCCTCA 1 chrX:517631-517731 ( 6) TAACCCTGATGTCCTCGGATCGAAACCGA 1 chrX:541260-541360 ( 71) TCGCGTGCCAGATCGGGGTTCAATTCCCC 1 chrVII:544308-544875 ( 45) TCGCGTGCCAGATCGGGGTTCAATTCCCC 1 chrIX:324006-324579 ( 70) TCGCGTGCCAGATCGGGGTTCAATTCCCC 1 chrXVI:55839-56566 ( 26) CAATCGAAGGGTTGCAGGTTCAATTCCTG 1 chrIV:1095098-1095681 ( 40) ATATCTGGAGGTCCTGTGTTCGATCCACA 1 chrXVI:435631-436257 ( 8) AAATCTGTTGGTCCTTAGTTCGATCCTGA 1 chrV:492145-492634 ( 22) GAACCAGAAGATTCCAGGTTCAAGTCCTG 1 chrVII:319566-320077 ( 44) TGGCCGATGAAACCCTGGTTCGATTCTAG 1 chrVII:110405-110943 ( 10) TGGCCGATGAAACCCTGGTTCGATTCTAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCNKRRGRTCMBSGGTTCGAYYCCSV MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 41112 bayes= 9.28934 E= 7.5e-355 -137 23 -367 102 95 41 -109 -254 139 -168 -135 -353 -453 108 -87 67 -1281 197 78 -1281 -73 49 91 -54 -121 -268 145 11 11 -209 145 -137 82 -209 108 -453 -95 -109 194 -221 51 -1281 161 -1281 -45 -87 -1281 105 -1281 216 -1281 -63 27 132 -22 -453 -295 65 128 -37 -353 118 157 -295 -121 -168 216 -453 -1281 -1281 249 -1281 -353 -1281 -1281 159 -1281 -1281 -1281 163 -1281 249 -1281 -1281 -84 -1281 221 -1281 163 -1281 -1281 -1281 -73 49 -51 42 -353 137 -1281 67 -1281 249 -1281 -1281 -453 208 -168 -84 -353 157 123 -353 -45 141 72 -1281 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCNKRRGRTCMBSGGTTCGAYYCCSV MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 72 E= 7.5e-355 0.125000 0.208333 0.013889 0.652778 0.625000 0.236111 0.083333 0.055556 0.847222 0.055556 0.069444 0.027778 0.013889 0.375000 0.097222 0.513889 0.000000 0.694444 0.305556 0.000000 0.194444 0.250000 0.333333 0.222222 0.138889 0.027778 0.486111 0.347222 0.347222 0.041667 0.486111 0.125000 0.569444 0.041667 0.375000 0.013889 0.166667 0.083333 0.680556 0.069444 0.458333 0.000000 0.541667 0.000000 0.236111 0.097222 0.000000 0.666667 0.000000 0.791667 0.000000 0.208333 0.388889 0.444444 0.152778 0.013889 0.041667 0.277778 0.430556 0.250000 0.027778 0.402778 0.527778 0.041667 0.138889 0.055556 0.791667 0.013889 0.000000 0.000000 1.000000 0.000000 0.027778 0.000000 0.000000 0.972222 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.180556 0.000000 0.819444 0.000000 1.000000 0.000000 0.000000 0.000000 0.194444 0.250000 0.125000 0.430556 0.027778 0.458333 0.000000 0.513889 0.000000 1.000000 0.000000 0.000000 0.013889 0.750000 0.055556 0.180556 0.027778 0.527778 0.416667 0.027778 0.236111 0.472222 0.291667 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCNKRRGRTCMBSGGTTCGAYYCCSV MEME-2 regular expression -------------------------------------------------------------------------------- [TC][AC]A[TC][CG][GCT][GT][GA][AG]G[GA][TA][CT][CA][GCT][GC]GGTTCGA[TC][TC]CC[CG][CGA] -------------------------------------------------------------------------------- Time 606.44 secs. ******************************************************************************** ******************************************************************************** MOTIF HACAYCCRTACAYCT MEME-3 width = 15 sites = 108 llr = 1232 E-value = 1.9e-130 ******************************************************************************** -------------------------------------------------------------------------------- Motif HACAYCCRTACAYCT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 362a:::618:9:22 pos.-specific C 218:6aa:2:a1352 probability G :2:::::412::::1 matrix T 41::4:::6:::635 bits 2.5 * * 2.2 ** * 2.0 ** * 1.7 ** * Relative 1.5 * ** * Entropy 1.2 ***** ** (16.5 bits) 1.0 ***** *** 0.7 ****** **** 0.5 ************ 0.2 ************** 0.0 --------------- Multilevel TACACCCATACATCT consensus AG T GC CTC sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYCT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrIV:221914-222363 - 46 5.47e-09 CGACGGTTAC CACACCCGTACACCC TTATCTCATT chrXIII:5247-5885 + 58 2.54e-08 ACCCACACAC CACACCCACACACCC TAACACAATC chrVI:4390-5032 + 43 2.54e-08 CCACACACAC CACACCCACACACCC ACACCCACAC chrXII:10982-11610 + 52 2.54e-08 ACACCCACAC CACACCCACACACCC ACACCCACAC chrXII:932041-932538 - 19 4.68e-08 CGTACATCCG TACATCCGTACATCT GTACACAAAA chrII:89623-89974 - 52 8.84e-08 TTTGTGACTT TACATCCATACACCC TCTTTAACAC chrXII:710624-710861 + 40 8.84e-08 AAGCAGGAAT CACACCCACGCATCT CATTTTGCGT chrXII:5390-5981 + 30 8.84e-08 ATATATACAC CACACCCACACACCA CACCCACACC chrV:6093-6634 + 35 8.84e-08 CACCCACACC CACACCCACACACCA TGCTCACCTT chrVI:95425-95857 - 44 1.33e-07 CAATCAGTCA TGCACCCACACACCG GACTGCGTAT chrVIII:125858-126342 + 51 1.33e-07 AAGACGTTAA TGCATCCGTACACCT ACATCTTTAC chrX:703229-703329 - 52 1.54e-07 GACGCGTGGA AGCACCCATGCATCC ACTATTTATT chrXIII:551322-551829 - 2 1.78e-07 CTGTACATTA CGCACCCATACATTT A chrXV:79731-80156 - 54 2.15e-07 ACTCCATGTA AACACCCGTACATAT TAAATAAGTG chrXIII:731941-732492 + 39 2.15e-07 CAAGACATAA TACATCCGCACATCG CGCATGTGTG chrIV:538983-539233 + 46 2.15e-07 CATGAATTAT CACACCCACACCCCT CATTCAATCC chrIII:163355-164024 - 7 2.59e-07 GTTAAATTAC CGCACCCACGCACCC AACCGC chrV:110492-110875 + 44 2.59e-07 ATGTGACAAA CACACCCAGACACCT CAATAGACAA chrXII:650931-651298 + 75 2.59e-07 CAATTATCTC AACACCCACACATTT CTCATGGTAG chrXVI:794431-794834 + 72 2.59e-07 AACATCTCCA AACACCCATACATAT TTATATTATC chrXIII:145842-146332 + 46 2.59e-07 AGCATTTTTG TACATCCATACACCA TACACCATAC chrI:81878-82299 - 71 2.59e-07 AAACTGTTGG TACATCCGTGCACCT CCGCTAGATG chrX:607806-607906 + 53 3.46e-07 ATGCCAACCC TCCATCCATACATCC TTTTTAACCC chrII:476941-477487 + 69 4.09e-07 ACATTCATGT TGCACCCACACATTT ATACACCCAG chrIX:254212-254579 - 12 4.09e-07 GGCGAGCTTC CGCACCCACACATTC TAATTGCCGC chrXVI:279855-280345 + 63 4.09e-07 AGGAGAAGTC CGCATCCGTGCACCT CACAATTCCG chrXV:161099-161419 - 36 4.83e-07 TTCTGGCAAC CAAACCCATACATCG GGATTCCTAT chrXIII:224036-224419 - 12 4.83e-07 TACTGAATTT TACATCCATACATTT TTTTGAAATT chrXIII:225311-225771 + 53 4.83e-07 ATCCGTGCAT TACATCCGTACATTC TATTTTTTAT chrIV:411236-411675 + 29 5.52e-07 AAACAAATCA AACACCCACACCCCG GGCACCCAAA chrV:85102-85488 + 54 5.52e-07 AGTGATATCA TCCACCCATACCCCT CGATGTATTC chrXV:1028575-1029180 - 79 7.04e-07 ACCATTG TGCATCCGTACATTT GATTTGTTTA chrXII:241513-242046 + 77 7.04e-07 TTTCCCTTTT TACATCCGTACATAT AAAATGTAA chrXVI:731875-732391 + 20 7.04e-07 GCATCGTCAG TACACCCATACCTTT AGGATGGTTG chrVIII:505786-506244 - 35 8.10e-07 GAGACAATTA TGCATCCATACATTT CACCCAGACA chrXII:818764-819216 + 58 8.10e-07 ATACCTTTCC AACATCCGTACATAT TGATTATTGT chrXVI:244114-244268 + 47 8.10e-07 TCATCGTCTA CAAACCCATACACCA TTTGTCAAGC chrIV:130525-131020 - 26 8.10e-07 GACATATACA AACATCCGCACATTT TATAGCTTTC chrVI:223887-224271 - 27 8.10e-07 TGTTTTCTTT TACATCCGTACATAC TCTTAGACCC chrVII:1000316-1000599 + 50 9.20e-07 CCACTAGGAT AGCACCCAAACACCT GCATATTTGG chrVII:555235-555714 + 85 9.20e-07 ACATCCCTTT TACACCCGTGCATTA A chrIX:68143-68550 + 53 1.03e-06 TTGAGTTTAT TACATCCGTACATTA CTAAGATGTA chrXVI:302580-303020 + 78 1.03e-06 AGCTAACTTG TACATCCAGACATCC TAAAACAC chrXV:94428-94875 + 33 1.16e-06 AAATAGAATT AACACCCATGCATTA TTGTCTTCGG chrVII:483387-483703 - 52 1.16e-06 CATTGCTGGG ATCACCCATACATCA CTCTGTTTTG chrIV:1401198-1401627 + 70 1.32e-06 CCAATCATTT TCCACCCACACATAT ATTACCCTTT chrXIII:500776-501266 + 4 1.32e-06 CCT AACATCCGTACATAG TCATAAGGCT chrX:391845-391945 + 61 1.32e-06 GCACACGCCC CACACCCAGACCTCC CTGCGAGCGG chrXIV:444427-444826 - 44 1.32e-06 TTCTACGGTC TCCATCCGTACCTCT TTAAATCCGT chrXII:234481-234971 - 26 1.32e-06 ATAAGCACAC TGCACCCATACCTTC CTTAAAAACG chrVII:371215-371493 + 50 1.32e-06 AAAAAATACC GGCACCCATGCACCT CACACCGCCG chrIV:341224-341659 - 51 1.32e-06 AGTCTACTTT TCCATCCGTACATTT TAACACCCAG chrIV:358078-358447 - 36 1.32e-06 TGGTGTACAC ACCACCCATACATTA TCTGACAAGG chrXII:922072-922582 + 67 1.64e-06 GTTTGAAATT GACACCCGTACATAT TCCAATTCTC chrVII:438550-438930 - 67 1.64e-06 AAAAGACCTT ACCATCCATACATTT TGGAACGTTA chrXVI:188595-188966 + 59 1.64e-06 CGTGACTTTT AAAACCCATGCATCG GTTACTATGG chrXII:781395-781911 - 52 1.82e-06 CTAGAGAAAA TGCATCCGTGCATTT TCATAAACCC chrXIV:495167-495652 - 18 1.82e-06 GTACACTATA CACACCCAAACCTCC TTTAAAAATT chrX:75292-75392 - 31 1.82e-06 AATTCCTCTA TACATCCACACCTCA CTATTTGAAA chrXII:522136-522466 + 51 2.04e-06 TTATTAACTA AACATCCGTACACAA AAGGTTTTCC chrIV:217084-217640 + 1 2.04e-06 . TGAACCCGTACATTT TATTCTATAA chrXVI:406099-406581 + 80 2.04e-06 TATGAAGTTT AACATCCGTACCTTT CCACCT chrVII:788282-788792 - 41 2.26e-06 TATTCCTTAC AACATCCGTGCATAC TCTAAACCCA chrIV:229378-229843 + 69 2.26e-06 GATATTCCTT TAAACCCATACATAT CTTACACAAA chrVII:856728-857007 - 46 2.49e-06 TTTGAGGGTA CCCGCCCATACACCG CACCAATGGA chrXV:968087-968434 - 58 2.49e-06 TCGAGCAGCG CACGCCCACGCACCC CACGCTTTTG chrV:53492-54004 + 20 2.73e-06 CTCTTTGTTT GACACCCACACATAT TTGGTGTTCG chrXV:167918-168496 - 30 2.73e-06 GGCGGCTTTA AACACCCGTGCCTAT ATTTAAGTTT chrVII:277009-277422 + 61 2.73e-06 GTATTTAAGC TAGACCCATACACCC GCTCTATGGG chrVIII:148912-149347 - 2 2.73e-06 CCCATACATT TTCACCCATGCACCA T chrXII:1028148-1028599 + 74 3.02e-06 AAGACAAAAT ATCACCCATGCACCA AAATGTATGG chrXI:618780-619257 - 42 3.02e-06 AAATACTATT TCCATCCGTGCCTCT AATAGATTTG chrXIV:330746-331147 + 53 3.02e-06 TCAGAGATCT TACATCCTTACATCT AAAGTAAAAC chrXII:1041369-1041859 + 71 3.02e-06 TGAAACGTTT AAAACCCAGACATCC CATAATTATT chrVII:648896-649449 - 26 3.67e-06 GGACATTTTA AACATCCGTACAACG AGAACCCATA chrIV:1116894-1117022 + 80 4.01e-06 TGCGACTTTT AAAATCCGTGCACCG CATATG chrXIV:63079-63609 - 23 4.01e-06 AATACTACTT TACATCCGAACATTT TAGCAACCCA chrIX:316084-316644 + 37 4.83e-06 TTTTCAGACT AGAACCCATACATTA TTTTACAAAC chrII:332254-332797 + 49 4.83e-06 ATTTCCTTGC TGCACCCATACAATT CTAAACCCAA chrXV:1025711-1026059 + 40 5.28e-06 ACATATGCTG AACACCCATTCATCA CGTGTAATTG chrXII:48643-49129 - 66 5.28e-06 CATCCCAATG AAGATCCGTACATCT TAGACACCCT chrXVI:653848-654077 + 28 5.28e-06 AAATTTTCAA AGAATCCGTACATTT AGAAATTTTT chrXV:866520-866980 - 55 5.75e-06 AAACCGGTGT AACACCCATACAAAC CCAGAATGCT chrXIII:124282-124773 - 35 6.26e-06 AGACTGCTAT TAAATCCGTACATTA TTAAAATGTA chrVIII:382880-383427 - 14 6.26e-06 AAAAGACAGT GACATCCGAACATCC GATACACCCA chrXVI:520133-520554 + 70 9.54e-06 GCCTGAGTGT TCCACCCAGGCCTCG CCGGAGGAAA chrXI:313238-313730 + 61 9.54e-06 AGTTTTTGGT TACATCTGCACATCT GGTTGAATAA chrXV:253763-254143 - 74 1.03e-05 CAAAACTTTT TTAATCCGTACACCG CGCGTATAAA chrXI:158176-158652 + 35 1.12e-05 TTCATTTATT TCAACCCGTGCACAC TGGAAATAAA chrII:167832-168236 + 50 1.12e-05 ACAGTGTTTT AAAACCCAGACATAT TTTTCACCAG chrIV:976384-976874 + 83 1.20e-05 GGCTGTGCAT AGTACCCATACACCA CAA chrIII:178298-178753 + 14 1.20e-05 AGATGTTTAT TAAGTCCGTACACCG CACGTAAGTA chrIV:1450846-1451307 - 56 1.30e-05 TTTAGACATT AACACCTGTACATAT TTGTATTTTA chrX:651182-651282 + 85 1.30e-05 ATAATTATTC TTAACCCATACATAT T chrIX:99603-100061 - 27 1.30e-05 TACACCATGT AACACCAGTACATTT ATTCATGAAA chrVII:919830-920254 + 79 1.41e-05 AAATATGATA AAAACCCAAACATAT TAAAAAA chrVII:479241-480023 - 50 1.51e-05 TAGCTTCACA CACACACACACACCG AAGCTGGTTG chrXIII:296738-298895 + 44 1.51e-05 GCGGGCCTAG AAAACCCGCGCAACT GATCCATTGT chrVIII:296862-297268 + 41 1.63e-05 CACAATTTCG TCCACCAGTACATCA CAGCATGCTC chrXII:567819-568765 + 13 1.75e-05 GAATCTACTC CCAACCCAAACATTT TCGCCGATAT chrX:90034-90134 + 54 2.03e-05 CCTGGACATT CTCACCCATACATGG CCTTGTTTTT chrXII:370497-370938 + 25 2.33e-05 AATAGCATGA AGTATCCGCACACCG CAGCGTTAGT chrII:165073-165418 + 61 2.68e-05 TATTACGAAT CTAGCCCATACACCG CGTTAGAGCA chrVIII:103860-104322 + 15 2.87e-05 AAGACGGTTT TCAGCCCACACATTT TTTGTTATTT chrXVI:699893-700430 + 22 2.87e-05 TCGAGGACCG CGAATCCTTACATCA CACCCAATCC chrXV:281865-282426 - 37 2.87e-05 TGTTATCCTG AGCATCCACTCCTCT ATTTAAGCGA chrXIV:241354-241741 + 65 4.26e-05 CCCAACATCC AGCACCTAAACACCA TCAATACACG chrVII:609463-609807 - 46 5.45e-05 ACTTAAACTT CACATCCTAACATTA GAGATGCCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYCT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:221914-222363 5.5e-09 45_[-3]_40 chrXIII:5247-5885 2.5e-08 57_[+3]_28 chrVI:4390-5032 2.5e-08 42_[+3]_43 chrXII:10982-11610 2.5e-08 51_[+3]_34 chrXII:932041-932538 4.7e-08 18_[-3]_67 chrII:89623-89974 8.8e-08 51_[-3]_34 chrXII:710624-710861 8.8e-08 39_[+3]_46 chrXII:5390-5981 8.8e-08 29_[+3]_56 chrV:6093-6634 8.8e-08 34_[+3]_51 chrVI:95425-95857 1.3e-07 43_[-3]_42 chrVIII:125858-126342 1.3e-07 50_[+3]_35 chrX:703229-703329 1.5e-07 51_[-3]_34 chrXIII:551322-551829 1.8e-07 1_[-3]_84 chrXV:79731-80156 2.2e-07 53_[-3]_32 chrXIII:731941-732492 2.2e-07 38_[+3]_47 chrIV:538983-539233 2.2e-07 45_[+3]_40 chrIII:163355-164024 2.6e-07 6_[-3]_79 chrV:110492-110875 2.6e-07 43_[+3]_42 chrXII:650931-651298 2.6e-07 74_[+3]_11 chrXVI:794431-794834 2.6e-07 71_[+3]_14 chrXIII:145842-146332 2.6e-07 45_[+3]_40 chrI:81878-82299 2.6e-07 70_[-3]_15 chrX:607806-607906 3.5e-07 52_[+3]_33 chrII:476941-477487 4.1e-07 68_[+3]_17 chrIX:254212-254579 4.1e-07 11_[-3]_74 chrXVI:279855-280345 4.1e-07 62_[+3]_23 chrXV:161099-161419 4.8e-07 35_[-3]_50 chrXIII:224036-224419 4.8e-07 11_[-3]_74 chrXIII:225311-225771 4.8e-07 52_[+3]_33 chrIV:411236-411675 5.5e-07 28_[+3]_57 chrV:85102-85488 5.5e-07 53_[+3]_32 chrXV:1028575-1029180 7e-07 78_[-3]_7 chrXII:241513-242046 7e-07 76_[+3]_9 chrXVI:731875-732391 7e-07 19_[+3]_66 chrVIII:505786-506244 8.1e-07 34_[-3]_51 chrXII:818764-819216 8.1e-07 57_[+3]_28 chrXVI:244114-244268 8.1e-07 46_[+3]_39 chrIV:130525-131020 8.1e-07 25_[-3]_60 chrVI:223887-224271 8.1e-07 26_[-3]_59 chrVII:1000316-1000599 9.2e-07 49_[+3]_36 chrVII:555235-555714 9.2e-07 84_[+3]_1 chrIX:68143-68550 1e-06 52_[+3]_33 chrXVI:302580-303020 1e-06 77_[+3]_8 chrXV:94428-94875 1.2e-06 32_[+3]_53 chrVII:483387-483703 1.2e-06 51_[-3]_34 chrIV:1401198-1401627 1.3e-06 69_[+3]_16 chrXIII:500776-501266 1.3e-06 3_[+3]_82 chrX:391845-391945 1.3e-06 60_[+3]_25 chrXIV:444427-444826 1.3e-06 43_[-3]_42 chrXII:234481-234971 1.3e-06 25_[-3]_60 chrVII:371215-371493 1.3e-06 49_[+3]_36 chrIV:341224-341659 1.3e-06 50_[-3]_35 chrIV:358078-358447 1.3e-06 35_[-3]_50 chrXII:922072-922582 1.6e-06 66_[+3]_19 chrVII:438550-438930 1.6e-06 66_[-3]_19 chrXVI:188595-188966 1.6e-06 58_[+3]_27 chrXII:781395-781911 1.8e-06 51_[-3]_34 chrXIV:495167-495652 1.8e-06 17_[-3]_68 chrX:75292-75392 1.8e-06 30_[-3]_55 chrXII:522136-522466 2e-06 50_[+3]_35 chrIV:217084-217640 2e-06 [+3]_85 chrXVI:406099-406581 2e-06 79_[+3]_6 chrVII:788282-788792 2.3e-06 40_[-3]_45 chrIV:229378-229843 2.3e-06 68_[+3]_17 chrVII:856728-857007 2.5e-06 45_[-3]_40 chrXV:968087-968434 2.5e-06 57_[-3]_28 chrV:53492-54004 2.7e-06 19_[+3]_66 chrXV:167918-168496 2.7e-06 29_[-3]_56 chrVII:277009-277422 2.7e-06 60_[+3]_25 chrVIII:148912-149347 2.7e-06 1_[-3]_84 chrXII:1028148-1028599 3e-06 73_[+3]_12 chrXI:618780-619257 3e-06 41_[-3]_44 chrXIV:330746-331147 3e-06 52_[+3]_33 chrXII:1041369-1041859 3e-06 70_[+3]_15 chrVII:648896-649449 3.7e-06 25_[-3]_60 chrIV:1116894-1117022 4e-06 79_[+3]_6 chrXIV:63079-63609 4e-06 22_[-3]_63 chrIX:316084-316644 4.8e-06 36_[+3]_49 chrII:332254-332797 4.8e-06 48_[+3]_37 chrXV:1025711-1026059 5.3e-06 39_[+3]_46 chrXII:48643-49129 5.3e-06 65_[-3]_20 chrXVI:653848-654077 5.3e-06 27_[+3]_58 chrXV:866520-866980 5.7e-06 54_[-3]_31 chrXIII:124282-124773 6.3e-06 34_[-3]_51 chrVIII:382880-383427 6.3e-06 13_[-3]_72 chrXVI:520133-520554 9.5e-06 69_[+3]_16 chrXI:313238-313730 9.5e-06 60_[+3]_25 chrXV:253763-254143 1e-05 73_[-3]_12 chrXI:158176-158652 1.1e-05 34_[+3]_51 chrII:167832-168236 1.1e-05 49_[+3]_36 chrIV:976384-976874 1.2e-05 82_[+3]_3 chrIII:178298-178753 1.2e-05 13_[+3]_72 chrIV:1450846-1451307 1.3e-05 55_[-3]_30 chrX:651182-651282 1.3e-05 84_[+3]_1 chrIX:99603-100061 1.3e-05 26_[-3]_59 chrVII:919830-920254 1.4e-05 78_[+3]_7 chrVII:479241-480023 1.5e-05 49_[-3]_36 chrXIII:296738-298895 1.5e-05 43_[+3]_42 chrVIII:296862-297268 1.6e-05 40_[+3]_45 chrXII:567819-568765 1.7e-05 12_[+3]_73 chrX:90034-90134 2e-05 53_[+3]_32 chrXII:370497-370938 2.3e-05 24_[+3]_61 chrII:165073-165418 2.7e-05 60_[+3]_25 chrVIII:103860-104322 2.9e-05 14_[+3]_71 chrXVI:699893-700430 2.9e-05 21_[+3]_64 chrXV:281865-282426 2.9e-05 36_[-3]_49 chrXIV:241354-241741 4.3e-05 64_[+3]_21 chrVII:609463-609807 5.4e-05 45_[-3]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYCT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HACAYCCRTACAYCT width=15 seqs=108 chrIV:221914-222363 ( 46) CACACCCGTACACCC 1 chrXIII:5247-5885 ( 58) CACACCCACACACCC 1 chrVI:4390-5032 ( 43) CACACCCACACACCC 1 chrXII:10982-11610 ( 52) CACACCCACACACCC 1 chrXII:932041-932538 ( 19) TACATCCGTACATCT 1 chrII:89623-89974 ( 52) TACATCCATACACCC 1 chrXII:710624-710861 ( 40) CACACCCACGCATCT 1 chrXII:5390-5981 ( 30) CACACCCACACACCA 1 chrV:6093-6634 ( 35) CACACCCACACACCA 1 chrVI:95425-95857 ( 44) TGCACCCACACACCG 1 chrVIII:125858-126342 ( 51) TGCATCCGTACACCT 1 chrX:703229-703329 ( 52) AGCACCCATGCATCC 1 chrXIII:551322-551829 ( 2) CGCACCCATACATTT 1 chrXV:79731-80156 ( 54) AACACCCGTACATAT 1 chrXIII:731941-732492 ( 39) TACATCCGCACATCG 1 chrIV:538983-539233 ( 46) CACACCCACACCCCT 1 chrIII:163355-164024 ( 7) CGCACCCACGCACCC 1 chrV:110492-110875 ( 44) CACACCCAGACACCT 1 chrXII:650931-651298 ( 75) AACACCCACACATTT 1 chrXVI:794431-794834 ( 72) AACACCCATACATAT 1 chrXIII:145842-146332 ( 46) TACATCCATACACCA 1 chrI:81878-82299 ( 71) TACATCCGTGCACCT 1 chrX:607806-607906 ( 53) TCCATCCATACATCC 1 chrII:476941-477487 ( 69) TGCACCCACACATTT 1 chrIX:254212-254579 ( 12) CGCACCCACACATTC 1 chrXVI:279855-280345 ( 63) CGCATCCGTGCACCT 1 chrXV:161099-161419 ( 36) CAAACCCATACATCG 1 chrXIII:224036-224419 ( 12) TACATCCATACATTT 1 chrXIII:225311-225771 ( 53) TACATCCGTACATTC 1 chrIV:411236-411675 ( 29) AACACCCACACCCCG 1 chrV:85102-85488 ( 54) TCCACCCATACCCCT 1 chrXV:1028575-1029180 ( 79) TGCATCCGTACATTT 1 chrXII:241513-242046 ( 77) TACATCCGTACATAT 1 chrXVI:731875-732391 ( 20) TACACCCATACCTTT 1 chrVIII:505786-506244 ( 35) TGCATCCATACATTT 1 chrXII:818764-819216 ( 58) AACATCCGTACATAT 1 chrXVI:244114-244268 ( 47) CAAACCCATACACCA 1 chrIV:130525-131020 ( 26) AACATCCGCACATTT 1 chrVI:223887-224271 ( 27) TACATCCGTACATAC 1 chrVII:1000316-1000599 ( 50) AGCACCCAAACACCT 1 chrVII:555235-555714 ( 85) TACACCCGTGCATTA 1 chrIX:68143-68550 ( 53) TACATCCGTACATTA 1 chrXVI:302580-303020 ( 78) TACATCCAGACATCC 1 chrXV:94428-94875 ( 33) AACACCCATGCATTA 1 chrVII:483387-483703 ( 52) ATCACCCATACATCA 1 chrIV:1401198-1401627 ( 70) TCCACCCACACATAT 1 chrXIII:500776-501266 ( 4) AACATCCGTACATAG 1 chrX:391845-391945 ( 61) CACACCCAGACCTCC 1 chrXIV:444427-444826 ( 44) TCCATCCGTACCTCT 1 chrXII:234481-234971 ( 26) TGCACCCATACCTTC 1 chrVII:371215-371493 ( 50) GGCACCCATGCACCT 1 chrIV:341224-341659 ( 51) TCCATCCGTACATTT 1 chrIV:358078-358447 ( 36) ACCACCCATACATTA 1 chrXII:922072-922582 ( 67) GACACCCGTACATAT 1 chrVII:438550-438930 ( 67) ACCATCCATACATTT 1 chrXVI:188595-188966 ( 59) AAAACCCATGCATCG 1 chrXII:781395-781911 ( 52) TGCATCCGTGCATTT 1 chrXIV:495167-495652 ( 18) CACACCCAAACCTCC 1 chrX:75292-75392 ( 31) TACATCCACACCTCA 1 chrXII:522136-522466 ( 51) AACATCCGTACACAA 1 chrIV:217084-217640 ( 1) TGAACCCGTACATTT 1 chrXVI:406099-406581 ( 80) AACATCCGTACCTTT 1 chrVII:788282-788792 ( 41) AACATCCGTGCATAC 1 chrIV:229378-229843 ( 69) TAAACCCATACATAT 1 chrVII:856728-857007 ( 46) CCCGCCCATACACCG 1 chrXV:968087-968434 ( 58) CACGCCCACGCACCC 1 chrV:53492-54004 ( 20) GACACCCACACATAT 1 chrXV:167918-168496 ( 30) AACACCCGTGCCTAT 1 chrVII:277009-277422 ( 61) TAGACCCATACACCC 1 chrVIII:148912-149347 ( 2) TTCACCCATGCACCA 1 chrXII:1028148-1028599 ( 74) ATCACCCATGCACCA 1 chrXI:618780-619257 ( 42) TCCATCCGTGCCTCT 1 chrXIV:330746-331147 ( 53) TACATCCTTACATCT 1 chrXII:1041369-1041859 ( 71) AAAACCCAGACATCC 1 chrVII:648896-649449 ( 26) AACATCCGTACAACG 1 chrIV:1116894-1117022 ( 80) AAAATCCGTGCACCG 1 chrXIV:63079-63609 ( 23) TACATCCGAACATTT 1 chrIX:316084-316644 ( 37) AGAACCCATACATTA 1 chrII:332254-332797 ( 49) TGCACCCATACAATT 1 chrXV:1025711-1026059 ( 40) AACACCCATTCATCA 1 chrXII:48643-49129 ( 66) AAGATCCGTACATCT 1 chrXVI:653848-654077 ( 28) AGAATCCGTACATTT 1 chrXV:866520-866980 ( 55) AACACCCATACAAAC 1 chrXIII:124282-124773 ( 35) TAAATCCGTACATTA 1 chrVIII:382880-383427 ( 14) GACATCCGAACATCC 1 chrXVI:520133-520554 ( 70) TCCACCCAGGCCTCG 1 chrXI:313238-313730 ( 61) TACATCTGCACATCT 1 chrXV:253763-254143 ( 74) TTAATCCGTACACCG 1 chrXI:158176-158652 ( 35) TCAACCCGTGCACAC 1 chrII:167832-168236 ( 50) AAAACCCAGACATAT 1 chrIV:976384-976874 ( 83) AGTACCCATACACCA 1 chrIII:178298-178753 ( 14) TAAGTCCGTACACCG 1 chrIV:1450846-1451307 ( 56) AACACCTGTACATAT 1 chrX:651182-651282 ( 85) TTAACCCATACATAT 1 chrIX:99603-100061 ( 27) AACACCAGTACATTT 1 chrVII:919830-920254 ( 79) AAAACCCAAACATAT 1 chrVII:479241-480023 ( 50) CACACACACACACCG 1 chrXIII:296738-298895 ( 44) AAAACCCGCGCAACT 1 chrVIII:296862-297268 ( 41) TCCACCAGTACATCA 1 chrXII:567819-568765 ( 13) CCAACCCAAACATTT 1 chrX:90034-90134 ( 54) CTCACCCATACATGG 1 chrXII:370497-370938 ( 25) AGTATCCGCACACCG 1 chrII:165073-165418 ( 61) CTAGCCCATACACCG 1 chrVIII:103860-104322 ( 15) TCAGCCCACACATTT 1 chrXVI:699893-700430 ( 22) CGAATCCTTACATCA 1 chrXV:281865-282426 ( 37) AGCATCCACTCCTCT 1 chrXIV:241354-241741 ( 65) AGCACCTAAACACCA 1 chrVII:609463-609807 ( 46) CACATCCTAACATTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYCT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 49106 bayes= 10.0215 E= 1.9e-130 5 38 -226 30 88 -45 26 -231 -73 211 -326 -412 156 -1340 -194 -1340 -1340 176 -1340 30 -512 248 -1340 -1340 -412 242 -1340 -354 86 -1340 113 -354 -212 38 -168 99 130 -1340 6 -412 -1340 249 -1340 -1340 143 -45 -1340 -1340 -312 87 -1340 99 -87 162 -426 -26 -73 20 -26 49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYCT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 108 E= 1.9e-130 0.333333 0.231481 0.037037 0.398148 0.592593 0.129630 0.212963 0.064815 0.194444 0.768519 0.018519 0.018519 0.953704 0.000000 0.046296 0.000000 0.000000 0.601852 0.000000 0.398148 0.009259 0.990741 0.000000 0.000000 0.018519 0.953704 0.000000 0.027778 0.583333 0.000000 0.388889 0.027778 0.074074 0.231481 0.055556 0.638889 0.796296 0.000000 0.185185 0.018519 0.000000 1.000000 0.000000 0.000000 0.870370 0.129630 0.000000 0.000000 0.037037 0.324074 0.000000 0.638889 0.175926 0.546296 0.009259 0.268519 0.194444 0.203704 0.148148 0.453704 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYCT MEME-3 regular expression -------------------------------------------------------------------------------- [TAC][AG]CA[CT]CC[AG][TC]ACA[TC][CT][TC] -------------------------------------------------------------------------------- Time 881.42 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVIII:125858-126342 1.28e-03 50_[+3(1.33e-07)]_35 chrVI:223887-224271 1.17e-03 26_[-3(8.10e-07)]_59 chrXV:623262-623618 7.39e-01 100 chrIII:178298-178753 3.36e-02 13_[+3(1.20e-05)]_72 chrXII:201752-202073 7.68e-01 100 chrXII:932041-932538 2.36e-04 18_[-3(4.68e-08)]_1_[-3(6.03e-08)]_\ 10_[-3(2.49e-06)]_26 chrX:424290-424390 8.05e-05 24_[-1(2.48e-07)]_55 chrII:169357-169847 8.73e-01 100 chrXV:253014-253504 7.58e-01 100 chrII:347358-347916 3.61e-05 15_[+1(2.48e-07)]_64 chrIX:324006-324579 1.72e-05 69_[-2(7.30e-09)]_2 chrXV:1027924-1028289 9.50e-01 100 chrXVI:55839-56566 7.53e-05 25_[-2(1.16e-08)]_46 chrIX:99603-100061 6.87e-03 26_[-3(1.30e-05)]_59 chrVII:830577-831067 8.53e-01 100 chrVI:191280-191875 8.37e-06 65_[-1(5.34e-09)]_14 chrXIII:24904-25631 2.67e-01 100 chrXIII:183707-184166 5.09e-13 20_[-2(2.63e-12)]_12_[-1(2.40e-08)]_\ 18 chrXII:211947-212175 8.64e-01 100 chrXIV:783784-784183 1.81e-01 100 chrXVI:436666-437021 4.94e-01 100 chrIV:644974-645439 1.79e-13 5_[-2(1.17e-11)]_13_[-1(2.14e-08)]_\ 32 chrXII:673547-674300 9.04e-01 100 chrXVI:377933-378378 9.92e-01 100 chrXII:201956-202446 2.00e-01 100 chrVII:794164-794663 7.04e-06 53_[+1(8.45e-10)]_26 chrVII:480192-480715 6.91e-01 100 chrXV:901448-901756 2.80e-01 100 chrXI:46516-47015 1.83e-13 28_[-2(7.24e-12)]_13_[-1(4.03e-09)]_\ 9 chrI:9770-10260 6.15e-01 100 chrX:528247-528347 9.98e-01 100 chrVII:736107-736672 3.09e-12 [+1(3.74e-08)]_13_[+2(7.24e-12)]_37 chrVII:926301-926791 9.66e-01 100 chrXII:10982-11610 4.34e-05 6_[+3(4.83e-07)]_[+3(8.84e-08)]_15_\ [+3(2.54e-08)]_18_[+3(2.04e-06)]_1 chrXVI:860067-860609 9.32e-01 100 chrIV:1044474-1044964 1.71e-01 100 chrXIV:567843-568485 2.94e-12 [+1(4.96e-10)]_44_[+2(1.14e-09)]_6 chrIV:1302079-1302325 5.65e-01 100 chrVII:205254-205777 1.10e-04 55_[+1(6.29e-08)]_24 chrXII:855970-856462 2.31e-01 100 chrIV:358078-358447 1.81e-03 35_[-3(1.32e-06)]_50 chrXII:369195-370104 8.71e-01 100 chrI:81878-82299 2.76e-04 70_[-3(2.59e-07)]_15 chrXV:968087-968434 2.28e-04 57_[-3(2.49e-06)]_28 chrIV:218366-218690 3.15e-01 100 chrIV:355248-355738 9.95e-01 100 chrVII:310404-311689 8.61e-01 100 chrV:266309-266537 9.14e-01 100 chrVI:226505-226954 1.82e-12 17_[-2(1.17e-12)]_14_[-1(1.76e-07)]_\ 19 chrXV:621306-621874 9.75e-01 100 chrIV:915529-916019 9.45e-01 100 chrXIII:296738-298895 6.18e-03 43_[+3(1.51e-05)]_42 chrV:267742-268232 9.76e-01 100 chrX:74550-74650 9.34e-01 100 chrIV:229378-229843 4.24e-03 68_[+3(2.26e-06)]_17 chrXV:409669-409934 9.73e-01 100 chrXVI:581861-582417 2.60e-08 7_[+2(1.17e-12)]_64 chrXI:43904-44394 7.19e-01 100 chrIV:83334-83806 8.82e-13 27_[+1(2.40e-08)]_12_[+2(2.63e-12)]_\ 11 chrX:139194-139294 3.51e-01 100 chrIII:168857-169316 8.46e-01 100 chrXIII:499820-500228 4.70e-01 100 chrXIII:510908-511124 6.49e-01 100 chrVII:930745-931292 9.84e-05 34_[-1(2.40e-08)]_45 chrXI:313238-313730 1.26e-05 17_[-1(6.74e-07)]_22_[+3(9.54e-06)]_\ 25 chrVII:541546-542190 1.26e-11 31_[+1(3.71e-05)]_13_[+2(5.16e-14)]_\ 6 chrXII:589032-589312 5.92e-01 100 chrII:392901-393391 6.54e-01 100 chrIV:472927-473417 7.33e-01 100 chrVIII:5222-5623 7.76e-02 100 chrXII:793709-795246 1.96e-02 67_[+1(5.74e-05)]_12 chrXV:970164-970466 9.65e-01 100 chrVII:784907-785215 6.00e-01 100 chrXVI:787399-787725 9.66e-01 100 chrXIII:225311-225771 9.03e-04 52_[+3(4.83e-07)]_33 chrIV:980798-981310 7.01e-06 30_[-1(1.18e-09)]_49 chrIV:340299-340651 3.37e-01 100 chrVIII:466714-467277 1.46e-04 44_[+1(3.16e-07)]_35 chrXI:309492-309703 2.76e-01 100 chrXIV:63079-63609 3.12e-03 22_[-3(4.01e-06)]_63 chrXIII:263627-264117 6.67e-01 100 chrVIII:85139-85616 5.14e-05 23_[-1(7.01e-09)]_56 chrIV:1042807-1043297 9.47e-01 100 chrIX:183229-183727 1.62e-17 20_[-2(2.66e-15)]_15_[-1(3.43e-10)]_\ 15 chrV:424931-425237 8.74e-01 100 chrXV:115585-116075 8.64e-01 100 chrIX:69487-69736 6.08e-01 100 chrIV:324297-324787 7.60e-01 100 chrIII:294857-295774 3.89e-01 100 chrVII:422865-423367 6.64e-05 25_[+1(6.29e-08)]_54 chrVII:856728-857007 4.91e-04 45_[-3(2.49e-06)]_40 chrVIII:147756-147948 9.99e-01 100 chrIV:410166-410592 6.08e-07 49_[+1(1.26e-10)]_30 chrIV:231757-232247 9.53e-01 100 chrXIV:631676-632171 7.30e-05 23_[-1(1.12e-07)]_56 chrXIII:632818-633308 9.40e-01 100 chrIV:341224-341659 7.09e-04 50_[-3(1.32e-06)]_35 chrVII:346077-346483 2.58e-01 100 chrV:152689-153137 9.99e-01 100 chrVII:876128-876734 2.03e-12 12_[+1(1.76e-07)]_14_[+2(1.17e-12)]_\ 24 chrIX:438783-439377 4.64e-03 13_[+2(8.82e-05)]_58 chrXIV:88831-89832 7.69e-01 100 chrVIII:109724-109921 6.14e-01 100 chrXIII:549955-550255 9.55e-01 100 chrXV:866520-866980 3.41e-04 36_[+3(9.54e-06)]_3_[-3(5.75e-06)]_\ 31 chrX:607806-607906 7.69e-04 52_[+3(3.46e-07)]_3_[+3(1.30e-05)]_\ 15 chrIV:220884-221374 6.71e-01 100 chrV:449545-449942 8.48e-01 100 chrXIII:632603-633093 9.10e-01 100 chrV:269241-269465 9.93e-01 100 chrXVI:435631-436257 3.13e-09 7_[-2(3.26e-08)]_13_[-1(2.40e-08)]_\ 30 chrVII:828484-829037 3.09e-12 21_[-2(7.24e-12)]_13_[-1(3.74e-08)]_\ 16 chrV:438471-438941 5.37e-05 43_[+1(7.01e-09)]_36 chrXV:300818-301457 7.62e-07 9_[+1(4.96e-10)]_70 chrIV:1093064-1093554 4.90e-01 100 chrXV:673311-673801 8.61e-01 100 chrV:151928-152254 9.76e-01 100 chrVII:440407-441297 6.19e-02 100 chrXV:93793-94362 9.42e-01 100 chrVII:366054-366742 9.87e-01 100 chrX:519363-519463 6.19e-01 100 chrX:517631-517731 2.24e-06 5_[-2(2.69e-09)]_66 chrVII:110405-110943 2.22e-07 9_[-2(8.64e-08)]_13_[-1(6.74e-07)]_\ 28 chrV:6093-6634 6.39e-04 34_[+3(8.84e-08)]_51 chrXVI:880089-880592 1.95e-17 14_[-2(2.66e-15)]_15_[-1(3.43e-10)]_\ 21 chrIV:976384-976874 1.52e-02 82_[+3(1.20e-05)]_3 chrXV:305174-305400 8.30e-01 100 chrXII:1041369-1041859 1.98e-03 70_[+3(3.02e-06)]_15 chrIV:538983-539233 1.08e-04 45_[+3(2.15e-07)]_40 chrV:441765-442651 4.96e-01 100 chrXIV:499297-499717 9.98e-01 100 chrVIII:386435-386907 3.81e-01 100 chrXVI:303987-304357 7.53e-01 100 chrV:461528-462173 2.74e-01 100 chrIV:322207-322739 6.62e-01 100 chrIX:256097-256319 9.21e-01 100 chrXV:678378-679237 8.35e-01 100 chrXV:571682-572254 1.84e-02 39_[+1(2.29e-05)]_40 chrXIV:628705-629002 7.52e-01 100 chrXI:326163-326769 5.81e-01 100 chrIV:1256877-1257329 4.00e-04 5_[-1(6.29e-08)]_74 chrVII:10162-10412 2.23e-01 100 chrV:308216-308342 6.34e-01 100 chrIII:10993-11549 1.51e-01 14_[-3(6.14e-05)]_71 chrVIII:296862-297268 1.39e-02 40_[+3(1.63e-05)]_45 chrXVI:856676-857133 9.11e-08 47_[+1(1.26e-10)]_32 chrXIV:575268-575752 5.06e-01 100 chrX:349067-349167 6.08e-01 100 chrVII:544308-544875 2.13e-05 44_[-2(7.30e-09)]_27 chrXVI:575135-575625 9.99e-01 100 chrXI:490706-491213 8.67e-03 58_[+1(1.41e-06)]_21 chrV:397572-397863 4.52e-01 100 chrIV:1358348-1358838 2.96e-01 100 chrXIII:224036-224419 2.01e-03 11_[-3(4.83e-07)]_10_[-3(6.26e-06)]_\ 49 chrIX:300054-300580 1.30e-03 12_[-1(1.76e-07)]_67 chrXI:379473-380015 1.55e-05 21_[+2(1.57e-09)]_50 chrIV:133002-133465 6.51e-01 100 chrXVI:787037-787527 3.08e-02 100 chrVII:364910-365446 9.87e-01 100 chrXI:517783-518195 1.86e-06 48_[+1(1.26e-10)]_31 chrIV:45875-46207 9.95e-01 100 chrV:176839-177353 4.50e-02 52_[+1(3.71e-05)]_27 chrIV:1305409-1305924 1.75e-06 13_[+1(1.18e-09)]_66 chrIX:257337-257854 6.11e-01 100 chrVII:661448-661962 2.93e-01 100 chrII:235687-236038 9.51e-01 100 chrXV:113554-114115 1.57e-11 17_[+1(3.36e-08)]_14_[+2(5.50e-11)]_\ 19 chrXV:779659-780914 9.62e-01 100 chrIV:974278-974406 1.22e-01 100 chrVII:919830-920254 4.89e-02 78_[+3(1.41e-05)]_7 chrXIV:169585-170075 2.11e-02 100 chrVII:727691-728117 9.57e-01 100 chrVII:439207-439697 8.88e-01 100 chrXIV:330746-331147 3.47e-03 52_[+3(3.02e-06)]_33 chrV:60991-62225 4.91e-01 100 chrXV:621306-621860 9.75e-01 100 chrVII:371215-371493 3.44e-04 49_[+3(1.32e-06)]_36 chrV:492145-492634 1.94e-07 21_[-2(4.09e-08)]_14_[-1(1.41e-06)]_\ 15 chrXII:940338-941447 7.99e-01 100 chrXII:234481-234971 4.04e-03 25_[-3(1.32e-06)]_60 chrXI:74380-74956 1.83e-09 5_[+1(2.69e-07)]_15_[+2(2.69e-09)]_\ 30 chrX:204445-204545 8.26e-03 59_[+1(2.29e-05)]_20 chrV:85102-85488 2.03e-03 24_[+3(6.84e-06)]_14_[+3(5.52e-07)]_\ 32 chrVI:135643-136133 5.30e-02 100 chrV:59115-59427 8.95e-01 100 chrXIV:172468-172594 9.95e-01 100 chrVIII:411107-411699 7.16e-01 100 chrVII:481850-482626 2.08e-01 100 chrVII:555235-555714 1.29e-03 84_[+3(9.20e-07)]_1 chrXVI:188595-188966 3.47e-04 58_[+3(1.64e-06)]_27 chrVII:479241-480023 1.33e-02 49_[-3(1.51e-05)]_36 chrXIII:145842-146332 7.40e-04 45_[+3(2.59e-07)]_15_[+3(3.07e-05)]_\ 10 chrVII:803331-803821 4.48e-01 100 chrIV:130525-131020 3.87e-03 25_[-3(8.10e-07)]_60 chrIV:651770-652260 6.63e-01 100 chrVII:1000316-1000599 1.04e-03 49_[+3(9.20e-07)]_36 chrIV:488518-489101 4.31e-06 46_[-2(6.96e-10)]_25 chrXV:40139-40685 2.05e-01 100 chrIX:137654-138144 9.96e-01 100 chrVIII:7958-8121 3.45e-01 100 chrXVI:64525-65015 8.08e-01 100 chrII:167832-168236 9.15e-03 49_[+3(1.12e-05)]_2_[+3(4.82e-05)]_\ 19 chrII:414846-415061 5.62e-01 100 chrXVI:819239-819793 7.52e-06 62_[+1(3.43e-10)]_17 chrII:237736-238494 9.53e-01 100 chrIV:946067-946660 6.54e-07 49_[+2(1.81e-10)]_22 chrIV:1092864-1093354 9.09e-01 100 chrVI:5227-5686 7.76e-02 100 chrVI:223125-223274 7.44e-01 100 chrXVI:520133-520554 3.91e-03 38_[-3(3.29e-05)]_16_[+3(9.54e-06)]_\ 16 chrVII:878561-879052 1.43e-02 38_[-1(1.53e-05)]_41 chrIII:130313-130803 5.52e-01 100 chrII:169324-169599 9.98e-01 100 chrXIII:808033-808596 2.97e-06 32_[-1(2.14e-08)]_47 chrX:263126-263226 9.75e-01 100 chrXII:628147-628702 2.10e-04 8_[+1(6.29e-08)]_71 chrXI:305844-306334 7.45e-01 100 chrXV:900098-900336 8.50e-01 100 chrI:143024-143610 4.37e-02 11_[-2(8.59e-05)]_60 chrIII:172669-173159 8.14e-01 100 chrV:138378-139013 1.40e-12 20_[+1(3.74e-08)]_13_[+2(7.24e-12)]_\ 17 chrXII:370497-370938 4.15e-02 24_[+3(2.33e-05)]_9_[-3(5.79e-05)]_\ 37 chrXIV:546859-547383 9.95e-07 22_[+1(4.96e-10)]_57 chrIV:492275-492598 3.33e-01 100 chrVII:115250-115780 3.81e-03 22_[+1(2.27e-06)]_57 chrV:13253-13743 5.75e-01 100 chrIII:142500-143015 8.82e-13 2_[-2(2.63e-12)]_12_[-1(2.40e-08)]_\ 36 chrI:498-816 5.38e-01 100 chrII:197227-197931 8.33e-11 [+2(2.66e-15)]_71 chrVIII:382880-383427 1.93e-03 13_[-3(6.26e-06)]_72 chrXV:624118-624587 8.05e-01 100 chrXV:438368-438973 5.51e-03 22_[+1(2.27e-06)]_57 chrXI:55641-55777 7.58e-01 100 chrXIII:372292-372796 5.04e-05 3_[-1(7.01e-09)]_76 chrV:139680-140910 9.22e-01 100 chrXI:415240-415730 8.81e-01 100 chrIII:177125-177571 3.45e-01 100 chrXVI:404781-405553 2.52e-02 100 chrVII:483387-483703 3.00e-03 51_[-3(1.16e-06)]_34 chrX:157418-157518 7.23e-01 100 chrXVI:329069-329559 9.96e-01 100 chrXVI:775607-776078 1.22e-04 23_[-1(2.40e-08)]_56 chrXIII:671673-671857 4.62e-01 100 chrXIV:96028-96514 6.65e-12 28_[-2(2.63e-10)]_13_[-1(1.17e-08)]_\ 9 chrVI:210417-210920 4.81e-08 9_[-2(1.81e-10)]_30_[-1(7.03e-05)]_\ 11 chrIV:322926-323436 7.86e-01 100 chrVIII:148912-149347 2.28e-03 1_[-3(2.73e-06)]_84 chrVIII:553467-553596 8.64e-01 100 chrXV:228054-228607 8.58e-04 50_[+1(2.69e-07)]_29 chrVII:185488-185988 2.03e-12 34_[-2(1.17e-12)]_14_[-1(1.76e-07)]_\ 2 chrIV:217084-217667 2.36e-01 100 chrIV:1237242-1237723 5.91e-01 100 chrXII:232110-233931 6.21e-02 100 chrXV:900732-901006 6.75e-01 100 chrXVI:244114-244268 1.33e-03 46_[+3(8.10e-07)]_39 chrVII:401342-401828 1.26e-11 [-2(5.16e-14)]_13_[-1(3.71e-05)]_37 chrIV:578122-578612 9.26e-01 100 chrIV:1525285-1525731 5.69e-01 100 chrIV:1175607-1176191 2.20e-06 14_[+2(1.99e-10)]_57 chrVII:412115-412633 3.72e-05 22_[-1(7.01e-09)]_57 chrXVI:731875-732391 2.55e-03 19_[+3(7.04e-07)]_66 chrXIV:444427-444826 5.29e-03 27_[-3(6.26e-06)]_1_[-3(1.32e-06)]_\ 42 chrIV:470352-470514 9.97e-01 100 chrXI:551738-552228 8.44e-01 100 chrXIII:626292-626899 9.93e-01 100 chrV:362811-363301 9.41e-01 100 chrX:156737-156837 9.22e-01 100 chrII:350561-351024 8.67e-01 100 chrIV:45875-46209 9.95e-01 100 chrXII:5390-5981 1.39e-04 29_[+3(8.84e-08)]_15_[+3(4.83e-07)]_\ 2_[+3(2.59e-07)]_9 chrII:405571-406193 1.94e-04 45_[+1(3.74e-08)]_34 chrV:443002-443562 4.79e-06 22_[-1(3.43e-10)]_57 chrXII:231165-231655 6.25e-01 100 chrVII:364143-364404 9.11e-01 100 chrVI:149454-149944 2.47e-01 100 chrX:651182-651282 1.15e-02 84_[+3(1.30e-05)]_1 chrXV:444924-445168 5.58e-01 100 chrXIII:837661-838219 9.78e-02 37_[+1(7.03e-05)]_42 chrXIV:281964-282411 7.39e-01 100 chrXIII:352036-352490 3.00e-03 66_[+1(8.90e-07)]_13 chrXIII:551322-551829 1.39e-03 1_[-3(1.78e-07)]_[-3(9.16e-05)]_45_\ [+3(3.29e-05)]_9 chrII:60644-61319 2.85e-01 100 chrIV:1450846-1451307 1.63e-02 55_[-3(1.30e-05)]_30 chrXIII:124282-124773 1.35e-02 16_[+3(3.34e-06)]_3_[-3(6.26e-06)]_\ 51 chrV:99879-100435 2.24e-06 59_[+2(2.69e-09)]_12 chrXV:160454-160776 1.65e-01 100 chrVII:845417-845908 6.33e-13 36_[+1(2.40e-08)]_12_[+2(2.63e-12)]_\ 2 chrVIII:134062-134604 1.79e-13 37_[+1(2.14e-08)]_13_[+2(1.17e-11)] chrXVI:302580-303020 4.24e-03 77_[+3(1.03e-06)]_8 chrXVI:689223-689885 2.52e-05 60_[+1(2.60e-09)]_19 chrV:101333-101630 9.69e-01 100 chrXV:841815-842002 9.99e-01 100 chrV:145525-146015 7.05e-01 100 chrXV:725261-725623 9.42e-01 100 chrII:6322-6769 4.88e-02 100 chrXII:448482-448987 2.81e-05 16_[-1(2.14e-08)]_63 chrVII:700463-701345 5.20e-01 100 chrXI:284377-284732 3.70e-01 100 chrXII:366039-366534 6.53e-02 100 chrXII:710624-710861 7.69e-04 39_[+3(8.84e-08)]_46 chrXII:875196-875723 7.67e-07 24_[+2(1.36e-10)]_47 chrXVI:653848-654077 2.95e-02 27_[+3(5.28e-06)]_58 chrXV:594150-594732 1.00e-04 13_[-1(7.99e-09)]_66 chrXI:578758-579290 2.82e-07 48_[+2(1.36e-10)]_23 chrIV:520680-521216 9.50e-06 73_[+1(2.14e-08)]_6 chrVI:4390-5032 2.11e-05 27_[+3(4.83e-07)]_[+3(2.54e-08)]_23_\ [+3(8.84e-08)]_5 chrIV:221914-222363 1.40e-05 21_[-3(9.68e-05)]_9_[-3(5.47e-09)]_\ 40 chrXV:110775-111300 7.54e-05 25_[-1(1.17e-08)]_54 chrVIII:132837-133409 3.06e-06 13_[-1(1.18e-09)]_66 chrIII:15158-15935 2.90e-01 100 chrVII:882465-883397 7.49e-01 100 chrV:354659-355309 5.60e-10 33_[+2(5.16e-14)]_38 chrX:531578-531678 8.22e-13 19_[+1(2.40e-08)]_12_[+2(2.63e-12)]_\ 19 chrIV:491582-491927 8.30e-01 100 chrXVI:407514-407849 6.68e-01 100 chrIX:26-338 8.82e-01 100 chrXVI:785486-786457 8.29e-01 100 chrIV:231963-232453 7.53e-01 100 chrXII:592345-592908 5.23e-06 22_[-1(1.64e-09)]_57 chrXVI:559968-560561 2.64e-04 54_[-1(8.90e-07)]_25 chrXIII:650950-651440 2.51e-01 100 chrII:235063-235403 8.26e-01 100 chrXII:712946-713606 9.02e-01 100 chrXVI:850270-850401 9.37e-01 100 chrII:165073-165418 2.77e-02 60_[+3(2.68e-05)]_25 chrX:373016-373116 7.16e-01 100 chrIII:127521-127924 5.40e-04 43_[+1(2.69e-07)]_36 chrXVI:279855-280345 3.06e-03 62_[+3(4.09e-07)]_23 chrXV:445767-446153 8.95e-01 100 chrXVI:794431-794834 1.21e-03 53_[+3(1.32e-06)]_3_[+3(2.59e-07)]_\ 14 chrX:90034-90134 5.67e-02 53_[+3(2.03e-05)]_32 chrXI:432629-433005 9.67e-01 100 chrIII:315572-316072 2.16e-01 100 chrXIII:923377-923861 6.41e-02 100 chrXV:253763-254143 9.90e-03 42_[+3(2.33e-05)]_16_[-3(1.03e-05)]_\ 12 chrIV:527190-527404 3.58e-01 100 chrX:121794-121894 7.28e-02 100 chrXII:650931-651298 1.58e-03 74_[+3(2.59e-07)]_11 chrXII:784143-784600 9.11e-06 32_[+1(5.34e-09)]_47 chrVII:352330-352820 9.69e-01 100 chrIV:667776-668300 1.95e-17 27_[-2(2.66e-15)]_15_[-1(3.43e-10)]_\ 8 chrV:130861-131378 2.31e-12 21_[-2(3.23e-11)]_13_[-1(1.02e-07)]_\ 16 chrVII:534577-535311 8.84e-01 100 chrXV:287926-288409 4.86e-02 74_[+1(7.03e-05)]_5 chrXII:1063938-1064428 2.93e-01 100 chrII:414019-414248 2.60e-01 100 chrXII:48643-49129 2.49e-02 65_[-3(5.28e-06)]_20 chrVI:137240-137816 1.83e-09 16_[-2(2.69e-09)]_15_[-1(2.69e-07)]_\ 19 chrVI:95425-95857 6.24e-05 43_[-3(1.33e-07)]_42 chrIV:652914-653036 9.62e-01 100 chrVII:311860-312212 7.93e-01 100 chrXV:619594-619838 9.56e-01 100 chrXV:226415-226888 5.27e-13 18_[-2(2.63e-12)]_12_[-1(2.40e-08)]_\ 20 chrVII:438550-438930 2.92e-03 43_[-3(2.33e-05)]_8_[-3(1.64e-06)]_\ 19 chrXIV:569684-570131 1.95e-17 18_[-2(2.66e-15)]_15_[-1(3.43e-10)]_\ 17 chrXV:94428-94875 7.63e-03 32_[+3(1.16e-06)]_20_[+3(1.41e-05)]_\ 18 chrVIII:382282-382853 8.66e-01 100 chrI:138918-139440 5.07e-07 22_[+1(4.96e-10)]_57 chrXVI:283198-283437 8.39e-01 100 chrXV:464184-464738 1.25e-06 38_[+1(4.96e-10)]_41 chrV:440889-441379 4.24e-01 100 chrX:22556-22656 7.63e-01 100 chrX:58899-58999 1.57e-11 18_[-2(5.50e-11)]_14_[-1(3.36e-08)]_\ 18 chrXIV:500118-500799 4.92e-01 100 chrVII:287180-287728 1.09e-02 30_[-1(1.53e-05)]_49 chrIX:255342-255832 7.12e-01 100 chrVII:316497-316932 3.38e-01 100 chrIV:512707-513197 9.69e-01 100 chrI:180930-181499 1.89e-01 100 chrIII:292579-293030 7.16e-01 100 chrXIV:442809-443438 2.16e-01 100 chrX:541260-541360 4.62e-07 36_[+1(2.29e-05)]_13_[+2(7.30e-09)]_\ 1 chrXVI:406099-406581 5.10e-03 79_[+3(2.04e-06)]_6 chrI:165988-166693 1.95e-07 11_[+2(2.32e-11)]_60 chrIX:256507-256688 4.52e-01 100 chrXIII:731941-732492 6.52e-04 38_[+3(2.15e-07)]_1_[-3(4.83e-06)]_\ 31 chrXII:499257-499627 9.72e-01 100 chrXII:799513-799790 6.71e-01 100 chrXII:84118-84473 5.01e-01 100 chrV:250073-250579 1.79e-13 9_[+1(2.14e-08)]_13_[+2(1.17e-11)]_\ 28 chrX:390868-390968 8.73e-10 8_[-2(1.99e-10)]_14_[-1(9.53e-07)]_\ 28 chrX:391845-391945 2.60e-03 60_[+3(1.32e-06)]_25 chrVI:83872-84350 2.61e-01 100 chrXV:1003882-1004470 5.50e-01 100 chrXI:219671-220138 2.36e-06 40_[+1(1.26e-10)]_39 chrIV:1150612-1151212 1.77e-05 58_[-1(5.34e-09)]_21 chrXII:262712-263586 1.36e-01 100 chrXI:27-304 7.06e-02 100 chrXV:965981-966471 6.12e-01 100 chrVI:263781-264360 4.44e-01 100 chrV:135160-135762 2.03e-12 22_[-2(1.17e-12)]_14_[-1(1.76e-07)]_\ 14 chrV:86372-86866 7.01e-06 34_[+1(1.18e-09)]_45 chrV:102303-102482 4.13e-01 100 chrX:265252-265352 9.26e-01 100 chrII:266142-266694 1.57e-11 9_[+1(3.36e-08)]_14_[+2(5.50e-11)]_\ 27 chrX:523789-523889 1.92e-06 63_[-1(1.18e-09)]_16 chrIV:1116894-1117022 1.38e-02 79_[+3(4.01e-06)]_6 chrIV:1461520-1462114 1.64e-04 41_[-1(6.29e-08)]_38 chrII:332254-332797 1.63e-02 48_[+3(4.83e-06)]_1_[+3(5.45e-05)]_\ 21 chrX:415805-415905 4.19e-01 100 chrXII:951023-951349 4.19e-01 100 chrXII:241513-242046 1.62e-03 76_[+3(7.04e-07)]_9 chrIII:14214-15014 3.09e-01 100 chrIV:579015-580122 7.16e-01 100 chrXV:92880-93491 8.07e-01 100 chrIV:1213237-1213727 3.51e-01 100 chrII:236863-237243 7.25e-01 100 chrXIII:500776-501266 3.90e-03 3_[+3(1.32e-06)]_82 chrIII:227672-228212 5.23e-07 49_[+1(2.60e-09)]_30 chrXI:552230-552443 5.89e-01 100 chrXII:198666-198830 5.77e-01 100 chrXV:161099-161419 1.35e-03 35_[-3(4.83e-07)]_50 chrXII:818764-819216 4.90e-04 57_[+3(8.10e-07)]_28 chrV:110492-110875 7.53e-04 43_[+3(2.59e-07)]_42 chrX:115745-115845 1.26e-11 15_[-2(5.16e-14)]_13_[-1(3.71e-05)]_\ 22 chrXV:797028-797227 1.03e-01 100 chrII:478945-479259 9.80e-01 100 chrVII:439555-439860 9.77e-01 100 chrVIII:555898-556405 4.98e-01 100 chrXI:557138-557628 9.71e-01 100 chrVII:1083625-1083890 1.59e-01 100 chrXII:922072-922582 1.68e-03 40_[+3(1.63e-05)]_11_[+3(1.64e-06)]_\ 19 chrXIV:505502-505881 5.67e-01 100 chrXV:526-1079 2.30e-01 100 chrXII:837716-838909 1.93e-01 100 chrIII:181291-181781 7.31e-01 100 chrXI:618780-619257 5.34e-03 13_[+3(7.46e-06)]_13_[-3(3.02e-06)]_\ 44 chrXIII:504664-505321 2.39e-01 100 chrVII:648896-649449 7.85e-03 10_[-3(4.83e-06)]_[-3(3.67e-06)]_60 chrVI:265636-266126 8.99e-01 100 chrXIII:420350-420901 9.61e-11 21_[-2(1.57e-09)]_15_[-1(7.01e-09)]_\ 14 chrXI:329619-330109 9.90e-01 100 chrXI:322383-322719 6.25e-02 100 chrV:435615-436099 4.39e-01 100 chrIV:440696-441186 4.46e-01 100 chrIV:1095098-1095681 1.11e-04 39_[-2(1.24e-08)]_32 chrXV:80481-80971 9.28e-01 100 chrVIII:505786-506244 3.84e-03 34_[-3(8.10e-07)]_51 chrIV:1075285-1075746 2.10e-08 15_[-2(8.94e-10)]_14_[-1(4.56e-06)]_\ 21 chrXI:548999-549489 3.87e-01 100 chrIV:217084-217640 6.72e-04 [+3(2.04e-06)]_85 chrXII:712288-712560 6.43e-01 100 chrV:301616-301852 9.56e-01 100 chrXI:458308-458913 6.12e-01 100 chrIX:254212-254579 1.26e-03 11_[-3(4.09e-07)]_35_[-3(6.14e-05)]_\ 24 chrIX:68143-68550 5.58e-04 52_[+3(1.03e-06)]_33 chrIX:316084-316644 7.18e-03 36_[+3(4.83e-06)]_29_[+3(9.68e-05)]_\ 5 chrM:59537-59805 5.40e-01 100 chrXII:899262-899580 9.82e-01 100 chrIX:174802-175384 1.00e-06 22_[+2(5.50e-11)]_49 chrIV:356683-356977 5.18e-01 100 chrVII:405257-405765 3.09e-12 8_[+1(3.74e-08)]_13_[+2(7.24e-12)]_\ 29 chrVIII:115943-116424 6.98e-05 25_[-1(3.36e-08)]_54 chrXII:637243-637733 1.96e-01 100 chrV:300789-301279 9.63e-01 100 chrX:354018-354118 2.14e-06 27_[+2(1.81e-10)]_44 chrII:89623-89974 1.85e-04 31_[-3(4.83e-06)]_5_[-3(8.84e-08)]_\ 34 chrXII:1051829-1052378 1.95e-17 26_[-2(2.66e-15)]_15_[-1(3.43e-10)]_\ 9 chrVII:920856-921102 6.91e-01 100 chrX:374201-374301 8.10e-10 27_[-1(2.29e-05)]_19_[-2(7.24e-12)]_\ 4 chrXIV:229681-230168 8.87e-01 100 chrXI:551574-551774 1.51e-01 100 chrXII:638425-638693 6.49e-01 100 chrXIV:783287-783547 3.20e-01 100 chrVIII:34948-35391 3.14e-01 100 chrIV:437481-438034 7.01e-06 64_[+1(1.18e-09)]_15 chrVI:204752-205200 5.44e-13 6_[-2(1.57e-09)]_14_[-1(1.26e-10)]_\ 30 chrV:311843-312354 4.73e-07 26_[-1(8.45e-10)]_53 chrXIII:550733-550969 8.44e-01 100 chrXV:281865-282426 8.74e-07 36_[-3(2.87e-05)]_17_[+1(2.40e-08)]_\ 11 chrVII:277009-277422 1.68e-03 60_[+3(2.73e-06)]_25 chrXII:636677-637167 4.40e-01 100 chrX:529310-529410 9.94e-01 100 chrXIII:5247-5885 2.07e-04 25_[+3(8.84e-08)]_17_[+3(2.54e-08)]_\ 28 chrXV:33-405 2.50e-02 22_[-1(4.69e-05)]_57 chrXIV:241354-241741 3.80e-02 64_[+3(4.26e-05)]_21 chrXVI:280751-281353 3.19e-01 100 chrVIII:150241-150731 9.84e-01 100 chrVII:480192-480719 6.91e-01 100 chrX:73347-73447 4.88e-01 100 chrIV:332293-332533 2.71e-01 100 chrIV:1354541-1354871 9.36e-01 100 chrX:75292-75392 7.49e-03 30_[-3(1.82e-06)]_27_[-3(2.04e-06)]_\ 13 chrV:363661-363999 9.09e-01 100 chrVII:319566-320077 2.22e-07 9_[+1(6.74e-07)]_13_[+2(8.64e-08)]_\ 28 chrXII:734620-735101 3.32e-11 27_[+2(2.66e-15)]_44 chrIV:519509-520032 3.95e-05 22_[+1(2.48e-07)]_57 chrV:394642-395132 9.33e-01 100 chrIII:163355-164024 2.20e-04 6_[-3(2.59e-07)]_15_[-3(2.17e-05)]_\ 49 chrX:422653-422753 8.73e-10 27_[+1(9.53e-07)]_14_[+2(1.99e-10)]_\ 9 chrVI:101132-101671 1.65e-06 24_[+1(4.96e-10)]_55 chrXII:92284-92854 1.25e-06 28_[+1(4.96e-10)]_51 chrV:430957-431665 5.48e-01 100 chrII:256655-256985 4.83e-01 100 chrXVI:571973-572565 2.13e-05 49_[+1(2.40e-08)]_30 chrXV:167918-168496 7.82e-03 29_[-3(2.73e-06)]_4_[+3(1.75e-05)]_\ 37 chrXIII:259000-259515 3.99e-06 11_[-1(1.18e-09)]_68 chrXV:354589-355079 5.76e-01 100 chrXII:930849-931090 3.13e-01 100 chrIV:411236-411675 5.55e-05 28_[+3(5.52e-07)]_13_[+3(1.03e-05)]_\ 29 chrVIII:554203-554391 7.71e-01 100 chrIX:316850-317193 8.65e-01 100 chrXII:522136-522466 9.46e-03 25_[+3(3.07e-05)]_10_[+3(2.04e-06)]_\ 35 chrXII:1028148-1028599 6.08e-03 73_[+3(3.02e-06)]_12 chrIX:287436-287662 7.93e-01 100 chrX:703229-703329 8.58e-04 51_[-3(1.54e-07)]_34 chrXIV:24357-24591 6.23e-01 100 chrVII:738850-739369 5.42e-06 62_[+1(3.43e-10)]_17 chrIII:783-1351 1.74e-01 100 chrIV:234183-234488 4.13e-02 60_[-2(8.82e-05)]_11 chrXV:79731-80156 7.58e-04 53_[-3(2.15e-07)]_32 chrXVI:214545-215284 9.56e-01 100 chrV:322017-322763 8.90e-01 100 chrV:551102-551581 1.53e-17 2_[-2(2.66e-15)]_15_[-1(3.43e-10)]_\ 33 chrXVI:699893-700430 7.60e-03 21_[+3(2.87e-05)]_64 chrII:36201-36617 5.83e-04 38_[+1(8.90e-07)]_41 chrII:476941-477487 1.39e-03 68_[+3(4.09e-07)]_17 chrVIII:385323-385648 8.46e-01 100 chrXV:1028575-1029180 3.58e-03 78_[-3(7.04e-07)]_7 chrV:487130-487604 1.26e-11 22_[-2(5.16e-14)]_13_[-1(3.71e-05)]_\ 15 chrV:117723-118340 9.92e-02 100 chrII:232535-232690 7.21e-01 100 chrXII:975816-976301 6.59e-04 27_[-1(2.69e-07)]_52 chrVIII:452499-452932 9.82e-01 100 chrXVI:768934-769516 2.82e-07 40_[-2(1.36e-10)]_31 chrXIV:495167-495652 9.30e-04 17_[-3(1.82e-06)]_2_[-3(1.41e-05)]_\ 51 chrV:53492-54004 1.29e-03 19_[+3(2.73e-06)]_1_[-3(3.02e-06)]_\ 50 chrVII:147967-148283 7.32e-01 100 chrXIII:290548-291030 5.65e-02 61_[+1(3.71e-05)]_18 chrVIII:388721-389233 2.46e-07 47_[-1(4.96e-10)]_32 chrVII:601133-601378 9.56e-01 100 chrXII:567819-568765 1.45e-02 12_[+3(1.75e-05)]_73 chrXIII:370680-371170 5.83e-01 100 chrXII:781395-781911 2.27e-03 33_[-3(2.03e-05)]_3_[-3(1.82e-06)]_\ 34 chrXVI:172830-173937 8.01e-01 100 chrVII:561372-562011 8.41e-02 100 chrXII:845708-846198 8.15e-01 100 chrVIII:381448-382084 2.97e-01 100 chrVII:278326-278584 2.36e-01 100 chrXI:500-1056 2.51e-01 100 chrVIII:358287-358828 1.96e-03 41_[-1(8.90e-07)]_38 chrIV:1401198-1401627 4.63e-03 54_[+3(3.51e-05)]_[+3(1.32e-06)]_16 chrXV:1025711-1026059 3.13e-03 39_[+3(5.28e-06)]_46 chrVII:328260-328971 1.26e-11 17_[+1(3.71e-05)]_13_[+2(5.16e-14)]_\ 20 chrXV:159830-160140 1.43e-01 100 chrVII:788282-788792 1.24e-03 40_[-3(2.26e-06)]_45 chrIV:1237944-1238394 2.16e-01 100 chrIV:1239778-1240037 3.91e-01 100 chrIV:1450017-1450507 9.40e-01 100 chrXII:498437-499022 1.64e-01 100 chrII:567491-567981 1.28e-01 100 chrXV:867772-868144 8.04e-01 100 chrXI:158176-158652 4.59e-02 34_[+3(1.12e-05)]_51 chrVIII:237661-238221 1.06e-03 27_[-1(8.90e-07)]_52 chrVIII:103860-104322 6.13e-02 14_[+3(2.87e-05)]_71 chrVII:609463-609807 4.03e-02 45_[-3(5.45e-05)]_40 chrII:644971-645440 1.26e-11 11_[+1(3.71e-05)]_13_[+2(5.16e-14)]_\ 26 chrVIII:127487-127670 9.60e-01 100 chrIV:116843-117638 4.73e-01 100 chrXIII:733098-733483 7.56e-01 100 chrIX:256545-257035 6.32e-01 100 chrXIII:168538-169139 4.81e-08 6_[+1(7.03e-05)]_30_[+2(1.81e-10)]_\ 14 chrII:326591-327127 8.24e-06 35_[-1(1.02e-07)]_44 chrVI:64712-65381 9.73e-01 100 chrVII:73648-74163 5.37e-05 26_[-1(7.01e-09)]_53 chrI:9973-10463 8.52e-01 100 chrVII:857228-857690 2.10e-04 61_[-1(6.29e-08)]_18 chrIX:210434-210960 1.95e-17 17_[+1(3.43e-10)]_15_[+2(2.66e-15)]_\ 18 chrXIII:572651-573239 1.82e-03 39_[-1(9.53e-07)]_40 chrXVI:795715-796040 9.94e-01 100 chrXVI:323712-324202 7.81e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************