******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--HIR1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:415527-415845 1.0000 100 chrXV:980501-980941 1.0000 100 chrXI:309467-309817 1.0000 100 chrX:354073-354173 1.0000 100 chrXI:67800-67960 1.0000 100 chrXII:796457-796881 1.0000 100 chrII:266202-266641 1.0000 100 chrII:228751-229101 1.0000 100 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chrXV:966062-966412 1.0000 100 chrIII:178372-178663 1.0000 100 chrIII:315622-315972 1.0000 100 chrVIII:411211-411415 1.0000 100 chrM:60603-60953 1.0000 100 chrII:645020-645309 1.0000 100 chrX:73395-73495 1.0000 100 chrXV:741826-742176 1.0000 100 chrXIV:631796-632067 1.0000 100 chrXIII:297793-298344 1.0000 100 chrV:266193-266543 1.0000 100 chrXV:780549-780793 1.0000 100 chrII:376291-376641 1.0000 100 chrXII:30-213 1.0000 100 chrIX:325567-325957 1.0000 100 chrIX:183375-183677 1.0000 100 chrXII:214841-215119 1.0000 100 chrXII:899120-899470 1.0000 100 chrVI:221785-222043 1.0000 100 chrII:197316-197851 1.0000 100 chrX:74713-74802 1.0000 89 chrVII:479879-480067 1.0000 100 chrXIII:733332-733429 1.0000 97 chrI:182410-182765 1.0000 100 chrXVI:745420-745770 1.0000 100 chrV:288407-288691 1.0000 100 chrVII:828534-828965 1.0000 100 chrXI:308090-308352 1.0000 100 chrIV:340267-340617 1.0000 100 chrVIII:237729-238110 1.0000 100 chrXIV:281955-282305 1.0000 100 chrIII:123510-123812 1.0000 100 chrXV:624298-624389 1.0000 91 chrIX:316131-316560 1.0000 100 chrVIII:382967-383348 1.0000 100 chrIII:162905-163255 1.0000 100 chrVIII:148962-149260 1.0000 100 chrVIII:125953-126285 1.0000 100 chrXII:282524-282840 1.0000 100 chrIV:229535-229764 1.0000 100 chrII:341276-341626 1.0000 100 chrXIV:783914-784138 1.0000 100 chrXIII:24539-24889 1.0000 100 chrXIII:761937-762172 1.0000 100 chrXII:932102-932508 1.0000 100 chrVII:310484-310827 1.0000 100 chrXV:670298-670648 1.0000 100 chrV:308375-308725 1.0000 100 chrV:61227-61421 1.0000 100 chrVI:164733-165083 1.0000 100 chrX:121908-121998 1.0000 90 chrV:138501-138880 1.0000 100 chrV:145625-145975 1.0000 100 chrXII:975936-976205 1.0000 100 chrIX:210504-210860 1.0000 100 chrXIII:650865-651120 1.0000 100 chrIX:136333-136683 1.0000 100 chrVII:324162-324512 1.0000 100 chrXII:92357-92684 1.0000 100 chrXVI:581905-582220 1.0000 100 chrIII:138308-138658 1.0000 100 chrXI:665641-665991 1.0000 100 chrXVI:795049-795399 1.0000 100 chrIV:1075354-1075650 1.0000 100 chrII:350650-350962 1.0000 100 chrX:383409-383509 1.0000 100 chrV:86476-86728 1.0000 100 chrXIV:602211-602395 1.0000 100 chrXIII:420528-420824 1.0000 100 chrVII:278359-278709 1.0000 100 chrII:45019-45314 1.0000 100 chrIX:231192-231542 1.0000 100 chrX:523880-523980 1.0000 100 chrXII:48680-49071 1.0000 100 chrV:140459-140832 1.0000 100 chrXVI:56077-56462 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--HIR1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--HIR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--HIR1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 594 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59326 N= 594 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.319 C 0.181 G 0.181 T 0.319 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--HIR1/background): A 0.324 C 0.176 G 0.176 T 0.324 ******************************************************************************** ******************************************************************************** MOTIF SNRDCSCYYWAMCVACTVSGCCAMVVRVSC MEME-1 width = 30 sites = 102 llr = 1992 E-value = 7.9e-439 ******************************************************************************** -------------------------------------------------------------------------------- Motif SNRDCSCYYWAMCVACTVSGCCAMVVRVSC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1234:112:464:3a:12221:a4435321 pos.-specific C 621173935:26a4:9:33199:5231359 probability G 334236:2::1::2:::367::::32333: matrix T :323:::4561::::191:::1:2121::: bits 2.5 * 2.3 * 2.0 * * * 1.8 * * * ** * Relative 1.5 * * * * *** * Entropy 1.3 * * * ** **** * (28.2 bits) 1.0 *** ** *** ***** * 0.8 * *** ** ** *** ***** ** 0.5 * *** ** ****** ****** *** 0.3 * * *** ***************** **** 0.0 ------------------------------ Multilevel CGGACGCTTTACCCACTGGGCCACAAAACC consensus GTATGC CCACA A CC AGCGGG sequence A G G A G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNRDCSCYYWAMCVACTVSGCCAMVVRVSC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXI:219731-220031 - 64 2.14e-13 TGCTAAG GGAGCGCGCTACCGACTACGCCACACGCCC TATTTACTGT chrXVI:856733-857050 - 61 2.14e-13 CCATGCTAAG GGAGCGCGCTACCGACTACGCCACACGCCC GAATCTTGTT chrXIII:321030-321343 + 54 2.14e-13 CCATGCTAAG GGAGCGCGCTACCGACTACGCCACACGCCC GATTTGTATT chrVI:204821-205149 + 32 2.14e-13 CCATGCTAAG GGAGCGCGCTACCGACTACGCCACACGCCC GAACGTTTGT chrIV:410243-410522 - 47 2.14e-13 CCATGCTAAG GGAGCGCGCTACCGACTACGCCACACGCCC AATATTTGTA chrXII:656820-657154 + 40 2.14e-13 CCATGCTAAG GGAGCGCGCTACCGACTACGCCACACGCCC AATTTTCTTG chrXIV:602211-602395 - 59 3.19e-13 GTTATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC ATTGTTATCT chrIX:210504-210860 - 33 3.19e-13 GTTATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC AGATATTTCA chrIX:183375-183677 + 8 3.19e-13 ATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC AGGAATTTGT chrV:551221-551513 + 12 3.19e-13 GTTATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC TGTAATCTGT chrXIV:569857-570042 + 12 3.19e-13 GTTATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC ACTGTTATCT chrXII:1052016-1052284 + 15 3.19e-13 GTTATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC ATGAAAAGGA chrXII:734686-734971 - 24 3.19e-13 GTTATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC AAACTTTGTT chrXVI:689379-689736 - 58 1.64e-12 GATTTCAAGT CTGTCGCCTTAACCACTCGGCCATAGTGCC CAAAATAATC chrX:523880-523980 + 59 6.01e-12 GATTTCTAAT CTTTCGCCTTAACCACTCGGCCAAGTTGCC TTTAATCTCT chrV:86476-86728 - 52 6.01e-12 GATTTCTAAT CTTTCGCCTTAACCACTCGGCCAAGTTGCC ATAACTCATT chrI:182410-182765 + 37 6.01e-12 GATTTCTAAT CTTTCGCCTTAACCACTCGGCCAAGTTGCC AAAATTGTAT chrIV:980880-981249 + 12 6.01e-12 GATTTCTAAT CTTTCGCCTTAACCACTCGGCCAAGTTGCC TCAATTTACA chrXII:167820-168189 + 42 6.01e-12 GATTTCTAAT CTTTCGCCTTAACCACTCGGCCAAGTTGCC ATATGACTAT chrII:226899-227273 - 39 6.01e-12 GATTTCTAAT CTTTCGCCTTAACCACTCGGCCAAGTTGCC TCGTTTTACA chrIII:227788-228125 - 36 6.01e-12 CCATTCGAGT CTCTCGCCTTAACCACTCGGCCATAGTGCC ATTTCGATTT chrIV:1305463-1305817 - 40 6.01e-12 GATTTCTAAT CTTTCGCCTTAACCACTCGGCCAAGTTGCC TTAATTTGTA chrVI:191358-191790 + 60 8.15e-12 AAATAGCAGG GCATCGCCTTAACCACTCGGCCACTGGGAC AGAATCTCTT chrXV:274525-274892 - 15 8.15e-12 AAATAGCAGG GCATCGCCTTAACCACTCGGCCACTGGGAC ACGATTACTT chrXII:784191-784503 - 57 8.15e-12 GAAATAGCAG GCATCGCCTTAACCACTCGGCCACTGGGAC GGTTGAACAA chrIV:1150712-1151126 + 43 8.15e-12 GAAATAGCAG GCATCGCCTTAACCACTCGGCCACTGGGAC TGAAACACTT chrXV:854080-854407 + 37 9.47e-12 CCTTGCAAGG GAAGCGCGCTACCAACTGCGCCATGTGCCC TGATGACTGT chrIX:325567-325957 - 36 1.95e-11 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC TCGTATTTTA chrXIV:560565-560942 + 33 1.95e-11 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC CCGTTATTAC chrIX:174864-175274 - 12 1.95e-11 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC TCGTACTTGT chrX:58998-59098 + 27 1.95e-11 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC TTCTATTTTA chrIII:295341-295612 - 58 1.95e-11 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC TTAATTGTAT chrXV:113656-113984 - 32 1.95e-11 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC TAAATCTCTG chrXV:353972-354263 + 17 1.95e-11 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC AGTAAACCGT chrII:266202-266641 - 7 1.95e-11 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC AGTTTT chrXVI:581905-582220 - 50 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TCTTTTGTTG chrV:135255-135696 + 43 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TTTTTTCTTG chrIV:1352367-1352715 + 18 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TATTTCGTTG chrVI:226568-226853 + 71 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC chrIV:1201554-1201966 - 40 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TATTTATTTG chrVII:185646-185933 + 18 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TATTTCGTTG chrIX:300116-300469 + 29 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TATTTCGTTG chrXIII:480496-480851 + 41 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TACTTATTGT chrVII:876222-876603 - 32 6.52e-11 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TATTCTATTA chrIV:1095236-1095620 + 54 2.78e-10 TTTCTTCAGT CTGGCGCTCTCCCAACTGAGCTAAGTCCGC TAACATAAGA chrVIII:237729-238110 + 41 4.85e-10 TTTCTTCAGT CTGGCGCTCTCCCAACTGAGCTAAATCCGC TTACTATTTG chrXVI:622424-622795 + 43 4.85e-10 TTTCTTCAGT CTGGCGCTCTCCCAACTGAGCTAAATCCGC ATATCAGAAT chrVII:440580-441000 + 38 4.85e-10 TTTCTTCAGT CTGGCGCTCTCCCAACTGAGCTAAATCCGC ATATATTTTA chrVIII:358383-358771 + 13 4.85e-10 TTTCTTCAGT CTGGCGCTCTCCCAACTGAGCTAAATCCGC TTACTATTTG chrXVI:560058-560477 + 43 4.85e-10 TTTCTTCAGT CTGGCGCTCTCCCAACTGAGCTAAATCCGC TCAATTTCTA chrII:36231-36538 - 64 4.85e-10 CTTCAGT CTGGCGCTCTCCCAACTGAGCTAAATCCGC TTACAACTAA chrXIII:420528-420824 + 6 5.40e-10 TAAGC AGATGCCATAACCGACTAGACCACGAAACC TGTTATTTGT chrXI:308090-308352 + 17 5.40e-10 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC ACTTAATTGT chrV:438524-438885 - 46 5.40e-10 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC TAATTTGTTG chrVII:412175-412543 + 29 5.40e-10 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC AGTTTTTTGA chrVII:73746-74083 + 9 5.40e-10 TGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC ACTTAATTGA chrXI:379521-379799 - 70 5.40e-10 C AGATGCCATAACCGACTAGACCACGAAACC TATTAATCTG chrVIII:85218-85517 + 25 5.40e-10 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC AAATTCTTAT chrVII:823303-823646 - 58 5.40e-10 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC ACTCTTATTG chrXIII:372354-372700 + 12 5.40e-10 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC AGGTTTTATT chrXII:731904-732252 - 62 7.44e-10 ACCTAAATC TGACGCCTTAAACCACTCGGCCAAACTCCC ATTGTATGTT chrX:617746-617846 - 48 7.44e-10 CACCTAAATC TGACGCCTTAAACCACTCGGCCAAACTCCC ATTGTTTGTT chrIV:359408-359821 - 13 1.68e-09 GCTTAAAAGC CGAACGCTCTACCAACTGAGCTAACAAGGA TGAGTTCTTC chrXV:438466-438883 - 19 1.68e-09 GCTTAAAAGC CGAACGCTCTACCAACTGAGCTAACAAGGA TGAGTTCTTC chrXII:975936-976205 + 7 1.85e-09 ACAGTC GCACGCCTTAACCAACTTGGCCATGGAGTC TTTTATTTCC chrXV:487261-487605 - 56 1.85e-09 ATTAACAGTC GCACGCCTTAACCAACTTGGCCATGGAGTC TAACTTTGTT chrVII:730971-731348 - 28 1.85e-09 ATTAACAGTC GCACGCCTTAACCAACTTGGCCATGGAGTC TTTTTGACTA chrXI:74456-74810 - 41 1.85e-09 ATTAACAGTC GCACGCCTTAACCAACTTGGCCATGGAGTC TAATTGCTAT chrXIV:632431-632776 - 46 1.85e-09 ATTAACAGTC GCACGCCTTAACCAACTTGGCCATGGAGTC ACTTTAAATT chrXII:628212-628615 - 20 2.72e-09 TTCTTGAATC AGGCGCCTTAGACCGCTCGGCCAAACAACC ACTTATTTGT chrIV:1461634-1462030 + 18 2.72e-09 TTCTTGAATC AGGCGCCTTAGACCGCTCGGCCAAACAACC ACTTATTTGT chrXV:340161-340569 + 27 2.98e-09 GGTTCGTAGC CAGACGCCGTGACCATTGGGCCACGAGGAA CAGATCTTGA chrIV:619920-620182 + 11 2.98e-09 GGTTCGTAGC CAGACGCCGTGACCATTGGGCCACGAGGAA CAAGATTTCT chrXII:374218-374516 - 38 2.98e-09 GGTTCGTAGC CAGACGCCGTGACCATTGGGCCACGAGGAA CAAGATTTAT chrX:233773-233873 - 68 2.98e-09 AGC CAGACGCCGTGACCATTGGGCCACGAGGAA CAAGAATATA chrV:492309-492580 + 1 2.98e-09 . CAGACGCCGTGACCATTGGGCCACGAGGAA TAGGATGTTC chrIV:884195-884494 - 67 6.16e-09 AAGC ACGAAGCTCTAACCACTGAGCTACACGAGC ATTTTCGAAA chrXII:5509-5857 + 32 7.33e-09 ATATATACAC CACACCCACACACCACACCCACACCACACC CACACCCACA chrVI:4494-4912 + 65 7.33e-09 CCCACACACC CACACCCACACACCACACCCACACCACACC CACACA chrVIII:562333-562609 - 60 8.70e-09 CACCCACACC CACACCCACACACCACACCCACACACACAC CCACACCCAC chrXII:11129-11469 + 19 8.70e-09 CCACACACAC CACACCCACACACCACACCCACACCCACAC CACACCCACA chrIV:58-254 + 11 8.70e-09 ACACCACACC CACACCCACACACCACACCCACACCCACAC ACCACACACT chrIV:1175656-1176040 - 31 8.70e-09 GATTATGAGA CTGACGCTCTTCCTACTGAGCTACTGAAGC TTTGTTTTGT chrX:422791-422891 - 21 8.70e-09 GATTATGAGA CTGACGCTCTTCCTACTGAGCTACTGAAGC ATACAAAGGA chrIII:32-306 + 17 8.70e-09 CACACACACC CACACCCACACACCACACCCACACACACAC CACACCCACA chrXIII:5366-5722 + 48 8.70e-09 TATATACACC CACACCCACACACCACACCCACACCCACAC ACCACACCCA chrXIII:572767-573162 + 12 8.70e-09 GATTATGAGA CTGACGCTCTTCCTACTGAGCTACTGAAGC TGTCTGTTAT chrXI:666509-666772 - 30 9.46e-09 CCACACCACA CCCACACCCACACCACACCCACACCACACC CACACACCCA chrXIV:546931-547345 - 6 1.03e-08 GTCGCCCAAA GCGAGAATCATACCACTAGACCACACGCCC GATTA chrVI:101204-101507 - 71 1.03e-08 . GCGAGAATCATACCACTAGACCACACGCCC GAATTATTGT chrXIII:924193-924405 - 70 1.12e-08 A CCCACACCCACACCACACCCACACACACAC ACCACACCCA chrVIII:556715-557165 - 3 1.12e-08 CCCACACACA CCCACACCCACACCACACCCACACCCACAC AC chrIV:519570-519880 - 68 3.62e-08 GTC TGCCGCCTTAGACCACTCGGCCAACCCTCC GTAAAATCAC chrXIV:783914-784138 - 58 4.84e-08 CACACCCACA CACCCACACACACCACACCCACACACTACC CTAACACTAC chrIII:255-490 + 2 4.84e-08 C ACCACACCCACACCACACCCACACCCACAC ACCCACACCC chrXII:1064928-1065321 - 3 5.59e-08 CCACACCCAC CACACCCACACACCACACACACACACACCA CA chrXIII:183781-184109 + 44 8.45e-08 ACGATGGCAA CGTTGGATTTTACCACTAAACCACTTGCGC GATCTTTATT chrIII:142602-142942 + 20 8.45e-08 ACGATGGCAA CGTTGGATTTTACCACTAAACCACTTGCGC TAGTAATCTT chrIII:123510-123812 + 8 1.34e-07 ACCCTAA GCGAGAATCATACCTCTAGACCACACGCCC TCCTTTGAAA chrXIV:631796-632067 + 7 1.34e-07 CCCTAA GCGAGAATCATACCTCTAGACCACACGCCC GGTAGAAGTT chrXV:980501-980941 - 12 1.34e-07 ATCGCCCAAA GCGAGAATCATTCCACTAGACCACACGCCC ATACAATTTG chrXV:43-202 + 1 2.96e-07 . CCACACACCACACCACACCCACACACCACC CACACACACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNRDCSCYYWAMCVACTVSGCCAMVVRVSC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXI:219731-220031 2.1e-13 63_[-1]_7 chrXVI:856733-857050 2.1e-13 60_[-1]_10 chrXIII:321030-321343 2.1e-13 53_[+1]_17 chrVI:204821-205149 2.1e-13 31_[+1]_39 chrIV:410243-410522 2.1e-13 46_[-1]_24 chrXII:656820-657154 2.1e-13 39_[+1]_31 chrXIV:602211-602395 3.2e-13 58_[-1]_12 chrIX:210504-210860 3.2e-13 32_[-1]_38 chrIX:183375-183677 3.2e-13 7_[+1]_63 chrV:551221-551513 3.2e-13 11_[+1]_59 chrXIV:569857-570042 3.2e-13 11_[+1]_59 chrXII:1052016-1052284 3.2e-13 14_[+1]_56 chrXII:734686-734971 3.2e-13 23_[-1]_47 chrXVI:689379-689736 1.6e-12 57_[-1]_13 chrX:523880-523980 6e-12 58_[+1]_12 chrV:86476-86728 6e-12 51_[-1]_19 chrI:182410-182765 6e-12 36_[+1]_34 chrIV:980880-981249 6e-12 11_[+1]_59 chrXII:167820-168189 6e-12 41_[+1]_29 chrII:226899-227273 6e-12 38_[-1]_32 chrIII:227788-228125 6e-12 35_[-1]_35 chrIV:1305463-1305817 6e-12 39_[-1]_31 chrVI:191358-191790 8.2e-12 59_[+1]_11 chrXV:274525-274892 8.2e-12 14_[-1]_56 chrXII:784191-784503 8.2e-12 56_[-1]_14 chrIV:1150712-1151126 8.2e-12 42_[+1]_28 chrXV:854080-854407 9.5e-12 36_[+1]_34 chrIX:325567-325957 2e-11 35_[-1]_35 chrXIV:560565-560942 2e-11 32_[+1]_38 chrIX:174864-175274 2e-11 11_[-1]_59 chrX:58998-59098 2e-11 26_[+1]_44 chrIII:295341-295612 2e-11 57_[-1]_13 chrXV:113656-113984 2e-11 31_[-1]_39 chrXV:353972-354263 2e-11 16_[+1]_54 chrII:266202-266641 2e-11 6_[-1]_64 chrXVI:581905-582220 6.5e-11 49_[-1]_21 chrV:135255-135696 6.5e-11 42_[+1]_28 chrIV:1352367-1352715 6.5e-11 17_[+1]_53 chrVI:226568-226853 6.5e-11 70_[+1] chrIV:1201554-1201966 6.5e-11 39_[-1]_31 chrVII:185646-185933 6.5e-11 17_[+1]_53 chrIX:300116-300469 6.5e-11 28_[+1]_42 chrXIII:480496-480851 6.5e-11 40_[+1]_30 chrVII:876222-876603 6.5e-11 31_[-1]_39 chrIV:1095236-1095620 2.8e-10 53_[+1]_17 chrVIII:237729-238110 4.8e-10 40_[+1]_30 chrXVI:622424-622795 4.8e-10 42_[+1]_28 chrVII:440580-441000 4.8e-10 37_[+1]_33 chrVIII:358383-358771 4.8e-10 12_[+1]_58 chrXVI:560058-560477 4.8e-10 42_[+1]_28 chrII:36231-36538 4.8e-10 63_[-1]_7 chrXIII:420528-420824 5.4e-10 5_[+1]_65 chrXI:308090-308352 5.4e-10 16_[+1]_54 chrV:438524-438885 5.4e-10 45_[-1]_25 chrVII:412175-412543 5.4e-10 28_[+1]_42 chrVII:73746-74083 5.4e-10 8_[+1]_62 chrXI:379521-379799 5.4e-10 69_[-1]_1 chrVIII:85218-85517 5.4e-10 24_[+1]_46 chrVII:823303-823646 5.4e-10 57_[-1]_13 chrXIII:372354-372700 5.4e-10 11_[+1]_59 chrXII:731904-732252 7.4e-10 61_[-1]_9 chrX:617746-617846 7.4e-10 47_[-1]_23 chrIV:359408-359821 1.7e-09 12_[-1]_58 chrXV:438466-438883 1.7e-09 18_[-1]_52 chrXII:975936-976205 1.9e-09 6_[+1]_64 chrXV:487261-487605 1.9e-09 55_[-1]_15 chrVII:730971-731348 1.9e-09 27_[-1]_43 chrXI:74456-74810 1.9e-09 40_[-1]_30 chrXIV:632431-632776 1.9e-09 45_[-1]_25 chrXII:628212-628615 2.7e-09 19_[-1]_51 chrIV:1461634-1462030 2.7e-09 17_[+1]_53 chrXV:340161-340569 3e-09 26_[+1]_44 chrIV:619920-620182 3e-09 10_[+1]_60 chrXII:374218-374516 3e-09 37_[-1]_33 chrX:233773-233873 3e-09 67_[-1]_3 chrV:492309-492580 3e-09 [+1]_70 chrIV:884195-884494 6.2e-09 66_[-1]_4 chrXII:5509-5857 7.3e-09 31_[+1]_39 chrVI:4494-4912 7.3e-09 64_[+1]_6 chrVIII:562333-562609 8.7e-09 59_[-1]_11 chrXII:11129-11469 8.7e-09 18_[+1]_52 chrIV:58-254 8.7e-09 10_[+1]_60 chrIV:1175656-1176040 8.7e-09 30_[-1]_40 chrX:422791-422891 8.7e-09 20_[-1]_50 chrIII:32-306 8.7e-09 16_[+1]_54 chrXIII:5366-5722 8.7e-09 47_[+1]_23 chrXIII:572767-573162 8.7e-09 11_[+1]_59 chrXI:666509-666772 9.5e-09 29_[-1]_41 chrXIV:546931-547345 1e-08 5_[-1]_65 chrVI:101204-101507 1e-08 70_[-1] chrXIII:924193-924405 1.1e-08 69_[-1]_1 chrVIII:556715-557165 1.1e-08 2_[-1]_68 chrIV:519570-519880 3.6e-08 67_[-1]_3 chrXIV:783914-784138 4.8e-08 57_[-1]_13 chrIII:255-490 4.8e-08 1_[+1]_69 chrXII:1064928-1065321 5.6e-08 2_[-1]_68 chrXIII:183781-184109 8.5e-08 43_[+1]_27 chrIII:142602-142942 8.5e-08 19_[+1]_51 chrIII:123510-123812 1.3e-07 7_[+1]_63 chrXIV:631796-632067 1.3e-07 6_[+1]_64 chrXV:980501-980941 1.3e-07 11_[-1]_59 chrXV:43-202 3e-07 [+1]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNRDCSCYYWAMCVACTVSGCCAMVVRVSC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SNRDCSCYYWAMCVACTVSGCCAMVVRVSC width=30 seqs=102 chrXI:219731-220031 ( 64) GGAGCGCGCTACCGACTACGCCACACGCCC 1 chrXVI:856733-857050 ( 61) GGAGCGCGCTACCGACTACGCCACACGCCC 1 chrXIII:321030-321343 ( 54) GGAGCGCGCTACCGACTACGCCACACGCCC 1 chrVI:204821-205149 ( 32) GGAGCGCGCTACCGACTACGCCACACGCCC 1 chrIV:410243-410522 ( 47) GGAGCGCGCTACCGACTACGCCACACGCCC 1 chrXII:656820-657154 ( 40) GGAGCGCGCTACCGACTACGCCACACGCCC 1 chrXIV:602211-602395 ( 59) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrIX:210504-210860 ( 33) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrIX:183375-183677 ( 8) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrV:551221-551513 ( 12) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrXIV:569857-570042 ( 12) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrXII:1052016-1052284 ( 15) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrXII:734686-734971 ( 24) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrXVI:689379-689736 ( 58) CTGTCGCCTTAACCACTCGGCCATAGTGCC 1 chrX:523880-523980 ( 59) CTTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrV:86476-86728 ( 52) CTTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrI:182410-182765 ( 37) CTTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrIV:980880-981249 ( 12) CTTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrXII:167820-168189 ( 42) CTTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrII:226899-227273 ( 39) CTTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrIII:227788-228125 ( 36) CTCTCGCCTTAACCACTCGGCCATAGTGCC 1 chrIV:1305463-1305817 ( 40) CTTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrVI:191358-191790 ( 60) GCATCGCCTTAACCACTCGGCCACTGGGAC 1 chrXV:274525-274892 ( 15) GCATCGCCTTAACCACTCGGCCACTGGGAC 1 chrXII:784191-784503 ( 57) GCATCGCCTTAACCACTCGGCCACTGGGAC 1 chrIV:1150712-1151126 ( 43) GCATCGCCTTAACCACTCGGCCACTGGGAC 1 chrXV:854080-854407 ( 37) GAAGCGCGCTACCAACTGCGCCATGTGCCC 1 chrIX:325567-325957 ( 36) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrXIV:560565-560942 ( 33) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrIX:174864-175274 ( 12) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrX:58998-59098 ( 27) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrIII:295341-295612 ( 58) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrXV:113656-113984 ( 32) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrXV:353972-354263 ( 17) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrII:266202-266641 ( 7) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrXVI:581905-582220 ( 50) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrV:135255-135696 ( 43) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrIV:1352367-1352715 ( 18) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrVI:226568-226853 ( 71) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrIV:1201554-1201966 ( 40) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrVII:185646-185933 ( 18) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrIX:300116-300469 ( 29) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrXIII:480496-480851 ( 41) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrVII:876222-876603 ( 32) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrIV:1095236-1095620 ( 54) CTGGCGCTCTCCCAACTGAGCTAAGTCCGC 1 chrVIII:237729-238110 ( 41) CTGGCGCTCTCCCAACTGAGCTAAATCCGC 1 chrXVI:622424-622795 ( 43) CTGGCGCTCTCCCAACTGAGCTAAATCCGC 1 chrVII:440580-441000 ( 38) CTGGCGCTCTCCCAACTGAGCTAAATCCGC 1 chrVIII:358383-358771 ( 13) CTGGCGCTCTCCCAACTGAGCTAAATCCGC 1 chrXVI:560058-560477 ( 43) CTGGCGCTCTCCCAACTGAGCTAAATCCGC 1 chrII:36231-36538 ( 64) CTGGCGCTCTCCCAACTGAGCTAAATCCGC 1 chrXIII:420528-420824 ( 6) AGATGCCATAACCGACTAGACCACGAAACC 1 chrXI:308090-308352 ( 17) AGATGCCATAACCGACTAGACCACGAAACC 1 chrV:438524-438885 ( 46) AGATGCCATAACCGACTAGACCACGAAACC 1 chrVII:412175-412543 ( 29) AGATGCCATAACCGACTAGACCACGAAACC 1 chrVII:73746-74083 ( 9) AGATGCCATAACCGACTAGACCACGAAACC 1 chrXI:379521-379799 ( 70) AGATGCCATAACCGACTAGACCACGAAACC 1 chrVIII:85218-85517 ( 25) AGATGCCATAACCGACTAGACCACGAAACC 1 chrVII:823303-823646 ( 58) AGATGCCATAACCGACTAGACCACGAAACC 1 chrXIII:372354-372700 ( 12) AGATGCCATAACCGACTAGACCACGAAACC 1 chrXII:731904-732252 ( 62) TGACGCCTTAAACCACTCGGCCAAACTCCC 1 chrX:617746-617846 ( 48) TGACGCCTTAAACCACTCGGCCAAACTCCC 1 chrIV:359408-359821 ( 13) CGAACGCTCTACCAACTGAGCTAACAAGGA 1 chrXV:438466-438883 ( 19) CGAACGCTCTACCAACTGAGCTAACAAGGA 1 chrXII:975936-976205 ( 7) GCACGCCTTAACCAACTTGGCCATGGAGTC 1 chrXV:487261-487605 ( 56) GCACGCCTTAACCAACTTGGCCATGGAGTC 1 chrVII:730971-731348 ( 28) GCACGCCTTAACCAACTTGGCCATGGAGTC 1 chrXI:74456-74810 ( 41) GCACGCCTTAACCAACTTGGCCATGGAGTC 1 chrXIV:632431-632776 ( 46) GCACGCCTTAACCAACTTGGCCATGGAGTC 1 chrXII:628212-628615 ( 20) AGGCGCCTTAGACCGCTCGGCCAAACAACC 1 chrIV:1461634-1462030 ( 18) AGGCGCCTTAGACCGCTCGGCCAAACAACC 1 chrXV:340161-340569 ( 27) CAGACGCCGTGACCATTGGGCCACGAGGAA 1 chrIV:619920-620182 ( 11) CAGACGCCGTGACCATTGGGCCACGAGGAA 1 chrXII:374218-374516 ( 38) CAGACGCCGTGACCATTGGGCCACGAGGAA 1 chrX:233773-233873 ( 68) CAGACGCCGTGACCATTGGGCCACGAGGAA 1 chrV:492309-492580 ( 1) CAGACGCCGTGACCATTGGGCCACGAGGAA 1 chrIV:884195-884494 ( 67) ACGAAGCTCTAACCACTGAGCTACACGAGC 1 chrXII:5509-5857 ( 32) CACACCCACACACCACACCCACACCACACC 1 chrVI:4494-4912 ( 65) CACACCCACACACCACACCCACACCACACC 1 chrVIII:562333-562609 ( 60) CACACCCACACACCACACCCACACACACAC 1 chrXII:11129-11469 ( 19) CACACCCACACACCACACCCACACCCACAC 1 chrIV:58-254 ( 11) CACACCCACACACCACACCCACACCCACAC 1 chrIV:1175656-1176040 ( 31) CTGACGCTCTTCCTACTGAGCTACTGAAGC 1 chrX:422791-422891 ( 21) CTGACGCTCTTCCTACTGAGCTACTGAAGC 1 chrIII:32-306 ( 17) CACACCCACACACCACACCCACACACACAC 1 chrXIII:5366-5722 ( 48) CACACCCACACACCACACCCACACCCACAC 1 chrXIII:572767-573162 ( 12) CTGACGCTCTTCCTACTGAGCTACTGAAGC 1 chrXI:666509-666772 ( 30) CCCACACCCACACCACACCCACACCACACC 1 chrXIV:546931-547345 ( 6) GCGAGAATCATACCACTAGACCACACGCCC 1 chrVI:101204-101507 ( 71) GCGAGAATCATACCACTAGACCACACGCCC 1 chrXIII:924193-924405 ( 70) CCCACACCCACACCACACCCACACACACAC 1 chrVIII:556715-557165 ( 3) CCCACACCCACACCACACCCACACCCACAC 1 chrIV:519570-519880 ( 68) TGCCGCCTTAGACCACTCGGCCAACCCTCC 1 chrXIV:783914-784138 ( 58) CACCCACACACACCACACCCACACACTACC 1 chrIII:255-490 ( 2) ACCACACCCACACCACACCCACACCCACAC 1 chrXII:1064928-1065321 ( 3) CACACCCACACACCACACACACACACACCA 1 chrXIII:183781-184109 ( 44) CGTTGGATTTTACCACTAAACCACTTGCGC 1 chrIII:142602-142942 ( 20) CGTTGGATTTTACCACTAAACCACTTGCGC 1 chrIII:123510-123812 ( 8) GCGAGAATCATACCTCTAGACCACACGCCC 1 chrXIV:631796-632067 ( 7) GCGAGAATCATACCTCTAGACCACACGCCC 1 chrXV:980501-980941 ( 12) GCGAGAATCATTCCACTAGACCACACGCCC 1 chrXV:43-202 ( 1) CCACACACCACACCACACCCACACACCACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNRDCSCYYWAMCVACTVSGCCAMVVRVSC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42100 bayes= 10.6165 E= 7.9e-439 -134 166 69 -346 -46 15 79 -29 -14 -26 112 -88 16 -58 29 -9 -404 190 88 -1332 -172 96 166 -1332 -204 239 -1332 -1332 -88 79 -17 16 -1332 142 -185 57 45 -1332 -1332 79 93 22 -117 -172 41 166 -1332 -504 -1332 250 -1332 -1332 -14 132 42 -346 157 -1332 -317 -404 -1332 229 -1332 -124 -124 -1332 -1332 141 -59 83 96 -134 -105 69 166 -1332 -105 -36 200 -1332 -124 229 -1332 -1332 -1332 231 -1332 -134 163 -1332 -1332 -1332 16 145 -1332 -105 20 15 96 -187 8 64 29 -96 51 -58 79 -146 8 83 92 -504 -96 142 83 -272 -204 239 -1332 -1332 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNRDCSCYYWAMCVACTVSGCCAMVVRVSC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 102 E= 7.9e-439 0.127451 0.558824 0.284314 0.029412 0.235294 0.196078 0.303922 0.264706 0.294118 0.147059 0.382353 0.176471 0.362745 0.117647 0.215686 0.303922 0.019608 0.656863 0.323529 0.000000 0.098039 0.343137 0.558824 0.000000 0.078431 0.921569 0.000000 0.000000 0.176471 0.303922 0.156863 0.362745 0.000000 0.470588 0.049020 0.480392 0.441176 0.000000 0.000000 0.558824 0.617647 0.205882 0.078431 0.098039 0.431373 0.558824 0.000000 0.009804 0.000000 1.000000 0.000000 0.000000 0.294118 0.441176 0.235294 0.029412 0.960784 0.000000 0.019608 0.019608 0.000000 0.862745 0.000000 0.137255 0.137255 0.000000 0.000000 0.862745 0.215686 0.313725 0.343137 0.127451 0.156863 0.284314 0.558824 0.000000 0.156863 0.137255 0.705882 0.000000 0.137255 0.862745 0.000000 0.000000 0.000000 0.872549 0.000000 0.127451 1.000000 0.000000 0.000000 0.000000 0.362745 0.480392 0.000000 0.156863 0.372549 0.196078 0.343137 0.088235 0.343137 0.274510 0.215686 0.166667 0.460784 0.117647 0.303922 0.117647 0.343137 0.313725 0.333333 0.009804 0.166667 0.470588 0.313725 0.049020 0.078431 0.921569 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNRDCSCYYWAMCVACTVSGCCAMVVRVSC MEME-1 regular expression -------------------------------------------------------------------------------- [CG][GTA][GA][ATG][CG][GC]C[TC][TC][TA][AC][CA]C[CAG]ACT[GCA][GC]GCCA[CA][AG][ACG][AG][AGC][CG]C -------------------------------------------------------------------------------- Time 344.47 secs. ******************************************************************************** ******************************************************************************** MOTIF TNGTAAYSDDRAGRTCMKSGGTTCGANYCC MEME-2 width = 30 sites = 49 llr = 992 E-value = 2.7e-178 ******************************************************************************** -------------------------------------------------------------------------------- Motif TNGTAAYSDDRAGRTCMKSGGTTCGANYCC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 231178::2357241:51:2::::2a3::: pos.-specific C 12211:361:::::18323::::a::24a7 probability G :25:1:143442751:1367a:::8:2::: matrix T 7327116:321:1172:41::aa:::35:2 bits 2.5 * * * 2.3 * * * 2.0 * * * 1.8 * * * Relative 1.5 * * ****** * Entropy 1.3 * * ******* ** (29.2 bits) 1.0 * * * ******** *** 0.8 * *** *** * ******** *** 0.5 * ****** ******** ******** *** 0.3 * ****** ***************** *** 0.0 ------------------------------ Multilevel TTGTAATCTGAAGGTCATGGGTTCGAATCC consensus AAT CGGAGG A TCGCA A TC T sequence C AT C G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNGTAAYSDDRAGRTCMKSGGTTCGANYCC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrV:138501-138880 + 57 6.76e-13 CGCGTCTGAC TTCTAATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrVII:828534-828965 - 35 6.76e-13 CGCGTCTGAC TTCTAATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrVII:736176-736560 + 53 6.76e-13 CGCGTCTGAC TTCTAATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrXIII:131658-132067 - 24 6.76e-13 CGCGTCTGAC TTCTAATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrXI:162305-162723 - 34 6.76e-13 CGCGTCTGAC TTCTAATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrIX:325567-325957 + 68 9.22e-13 GGCGCCACAC TAGTAATGTGGAGATCATCGGTTCAAATCC GAT chrXIV:560565-560942 - 1 9.22e-13 GGCGCCACAC TAGTAATGTGGAGATCATCGGTTCAAATCC chrIX:174864-175274 + 44 9.22e-13 GGCGCCACAC TAGTAATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrIV:434026-434531 - 47 9.22e-13 GGCGCCACAC TAGTAATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrXV:113656-113984 + 64 9.22e-13 GGCGCCACAC TAGTAATGTGGAGATCATCGGTTCAAATCC GATTGGA chrII:266202-266641 + 39 9.22e-13 GGCGCCACAC TAGTAATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrIX:210504-210860 + 66 1.07e-12 GGCACCGTGC TAATAACGCGGGGATCAGCGGTTCGATCCC GCTAG chrV:135255-135696 - 11 1.07e-12 CGCGTATGAC TCTTAATCATAAGGTTAGGGGTTCGAGCCC CCTACAGGGC chrVI:226568-226853 - 39 1.07e-12 CGCGTATGAC TCTTAATCATAAGGTTAGGGGTTCGAGCCC CCTACAGGGC chrX:414823-414923 + 26 1.07e-12 CGCGTATGAC TCTTAATCATAAGGTTAGGGGTTCGAGCCC CCTACAGGGC chrXIII:480496-480851 - 9 1.07e-12 CGCGTATGAC TCTTAATCATAAGGTTAGGGGTTCGAGCCC CCTACAGG chrXII:734686-734971 + 57 1.07e-12 GGCACCGTGC TAATAACGCGGGGATCAGCGGTTCGATCCC GCTAGAGACC chrVII:876222-876603 + 64 1.07e-12 CGCGTATGAC TCTTAATCATAAGGTTAGGGGTTCGAGCCC CCTACAG chrXV:854080-854407 - 5 1.94e-12 CGCGCTTCCC TTGCAAGGAAGAGGTCATCGGTTCGATTCC GGTT chrIV:1175656-1176040 + 63 6.20e-11 AGCGTCAGTC TCATAATCTGAAGGTCGAGAGTTCGAACCT CCCCTGGA chrX:422791-422891 + 53 6.20e-11 AGCGTCAGTC TCATAATCTGAAGGTCGAGAGTTCGAACCT CCCCTGGAGC chrIV:359408-359821 + 68 9.69e-11 TGCTTAAGCA AGGATACCGAAATGTCAGGGGTTCGAGCCC CCT chrXI:578833-579202 + 53 9.69e-11 TGCTTAAGCA AGGATACCGAAATGTCAGGGGTTCGAGCCC CCTATGAGGA chrXVI:769028-769446 - 31 9.69e-11 TGCTTAAGCA AGGATACCGAAATGTCAGGGGTTCGAGCCC CCTATGAGGA chrXIII:183781-184109 - 14 1.20e-10 AAATCCAACG TTGCCATCGTTGGGCCCCCGGTTCGATTCC GGGCTTGCGC chrX:531653-531753 + 24 1.20e-10 AAATCCAACG TTGCCATCGTTGGGCCCCCGGTTCGATTCC GGGCTTGCGC chrXIII:321030-321343 - 22 2.27e-10 CGCGCTCCCT TAGCATGGGAGAGGTCTCCGGTTCGATTCC GGACTCGTCC chrXII:656820-657154 - 8 2.27e-10 CGCGCTCCCT TAGCATGGGAGAGGTCTCCGGTTCGATTCC GGACTCG chrX:115776-115876 - 25 2.51e-10 TCACATCACG CTTTCACCGTGGAGACCGGGGTTCGACTCC CCGTATCGGA chrV:487210-487554 - 10 2.51e-10 TCACATCACG CTTTCACCGTGGAGACCGGGGTTCGACTCC CCGTATCGG chrXI:140863-141269 - 13 2.51e-10 TCACATCACG CTTTCACCGTGGAGACCGGGGTTCGACTCC CCGTATCGGA chrV:250139-250510 + 43 5.02e-10 TCACTTTCGG TTTTGATCCGGACAACCCCGGTTCGAATCC GGGTAGGACC chrIII:168206-168516 - 1 5.02e-10 TCACTTTCGG TTTTGATCCGGACAACCCCGGTTCGAATCC chrXIV:546931-547345 + 68 5.53e-10 CAGGAAGACA AAGCATGCGAGAGGCCCTGGGTTCAATTCC CAG chrVII:730971-731348 + 61 2.53e-09 GGCGTGCGAC TGTTAATCGCAAGATCGTGAGTTCAACCCT CACTGGGGTC chrXVI:744133-744496 + 51 2.53e-09 AGCGTTGCAC TTGTAATGCAAAGGTCGTTAGTTCAATTCT GACAGGTGGC chrIV:1075354-1075650 - 31 6.63e-09 CACGTTGCCT TCACACGGCAAAGGTCCCGAGTTCGATCCT CGGTTGGAAC chrIV:946179-946542 + 50 6.63e-09 ATTTATCACT ACGAAATCTTGAGATCGGGCGTTCGACTCG CCCCCGGGAG chrXVI:775662-775988 - 1 8.96e-09 CGCAGCAGAT TGCAAATCTGTTGGTCCTTAGTTCGATCCT chrIV:1095236-1095620 - 3 8.96e-09 AACTTTGGTC AAGATATCTGGAGGTCCTGTGTTCGATCCA CA chrVII:706966-707329 - 22 8.96e-09 CGCAGCAGAT TGCAAATCTGTTGGTCCTTAGTTCGATCCT GAGTGCGAGC chrV:99966-100333 + 65 1.39e-08 CGCGCAGGGC TCATAACCCTGATGTCCTCGGATCGAAACC GAGCGG chrXII:374218-374516 + 70 1.49e-08 GGCGTCTGGC TACGAACCAGAAGATTCCAGGTTCAAGTCC T chrXIII:504713-505184 + 70 5.84e-08 GGGAATACTC AGGTATCGTAAGATGCAAGAGTTCGAATCT C chrXIV:442855-443286 + 59 5.84e-08 GGGAATACTC AGGTATCGTAAGATGCAAGAGTTCGAATCT CTTAGCAACC chrXI:458386-458845 + 65 5.84e-08 GGGAATACTC AGGTATCGTAAGATGCAAGAGTTCGAATCT CTTAGC chrI:180975-181411 + 71 5.84e-08 GGGAATACTC AGGTATCGTAAGATGCAAGAGTTCGAATCT chrV:434402-434775 - 14 6.58e-08 GTACACATCG TTGTGGCCGATGAAACCCTGGTTCGATTCT AGGAGATGGC chrIX:324156-324514 - 29 9.86e-08 GAATGGGCGC TTGTCGCGTGCCAGATCGGGGTTCAATTCC CCGTCGCGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNGTAAYSDDRAGRTCMKSGGTTCGANYCC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:138501-138880 6.8e-13 56_[+2]_14 chrVII:828534-828965 6.8e-13 34_[-2]_36 chrVII:736176-736560 6.8e-13 52_[+2]_18 chrXIII:131658-132067 6.8e-13 23_[-2]_47 chrXI:162305-162723 6.8e-13 33_[-2]_37 chrIX:325567-325957 9.2e-13 67_[+2]_3 chrXIV:560565-560942 9.2e-13 [-2]_70 chrIX:174864-175274 9.2e-13 43_[+2]_27 chrIV:434026-434531 9.2e-13 46_[-2]_24 chrXV:113656-113984 9.2e-13 63_[+2]_7 chrII:266202-266641 9.2e-13 38_[+2]_32 chrIX:210504-210860 1.1e-12 65_[+2]_5 chrV:135255-135696 1.1e-12 10_[-2]_60 chrVI:226568-226853 1.1e-12 38_[-2]_32 chrX:414823-414923 1.1e-12 25_[+2]_45 chrXIII:480496-480851 1.1e-12 8_[-2]_62 chrXII:734686-734971 1.1e-12 56_[+2]_14 chrVII:876222-876603 1.1e-12 63_[+2]_7 chrXV:854080-854407 1.9e-12 4_[-2]_66 chrIV:1175656-1176040 6.2e-11 62_[+2]_8 chrX:422791-422891 6.2e-11 52_[+2]_18 chrIV:359408-359821 9.7e-11 67_[+2]_3 chrXI:578833-579202 9.7e-11 52_[+2]_18 chrXVI:769028-769446 9.7e-11 30_[-2]_40 chrXIII:183781-184109 1.2e-10 13_[-2]_57 chrX:531653-531753 1.2e-10 23_[+2]_47 chrXIII:321030-321343 2.3e-10 21_[-2]_49 chrXII:656820-657154 2.3e-10 7_[-2]_63 chrX:115776-115876 2.5e-10 24_[-2]_46 chrV:487210-487554 2.5e-10 9_[-2]_61 chrXI:140863-141269 2.5e-10 12_[-2]_58 chrV:250139-250510 5e-10 42_[+2]_28 chrIII:168206-168516 5e-10 [-2]_70 chrXIV:546931-547345 5.5e-10 67_[+2]_3 chrVII:730971-731348 2.5e-09 60_[+2]_10 chrXVI:744133-744496 2.5e-09 50_[+2]_20 chrIV:1075354-1075650 6.6e-09 30_[-2]_40 chrIV:946179-946542 6.6e-09 49_[+2]_21 chrXVI:775662-775988 9e-09 [-2]_70 chrIV:1095236-1095620 9e-09 2_[-2]_68 chrVII:706966-707329 9e-09 21_[-2]_49 chrV:99966-100333 1.4e-08 64_[+2]_6 chrXII:374218-374516 1.5e-08 69_[+2]_1 chrXIII:504713-505184 5.8e-08 69_[+2]_1 chrXIV:442855-443286 5.8e-08 58_[+2]_12 chrXI:458386-458845 5.8e-08 64_[+2]_6 chrI:180975-181411 5.8e-08 70_[+2] chrV:434402-434775 6.6e-08 13_[-2]_57 chrIX:324156-324514 9.9e-08 28_[-2]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNGTAAYSDDRAGRTCMKSGGTTCGANYCC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TNGTAAYSDDRAGRTCMKSGGTTCGANYCC width=30 seqs=49 chrV:138501-138880 ( 57) TTCTAATCAGAAGATTATGGGTTCGACCCC 1 chrVII:828534-828965 ( 35) TTCTAATCAGAAGATTATGGGTTCGACCCC 1 chrVII:736176-736560 ( 53) TTCTAATCAGAAGATTATGGGTTCGACCCC 1 chrXIII:131658-132067 ( 24) TTCTAATCAGAAGATTATGGGTTCGACCCC 1 chrXI:162305-162723 ( 34) TTCTAATCAGAAGATTATGGGTTCGACCCC 1 chrIX:325567-325957 ( 68) TAGTAATGTGGAGATCATCGGTTCAAATCC 1 chrXIV:560565-560942 ( 1) TAGTAATGTGGAGATCATCGGTTCAAATCC 1 chrIX:174864-175274 ( 44) TAGTAATGTGGAGATCATCGGTTCAAATCC 1 chrIV:434026-434531 ( 47) TAGTAATGTGGAGATCATCGGTTCAAATCC 1 chrXV:113656-113984 ( 64) TAGTAATGTGGAGATCATCGGTTCAAATCC 1 chrII:266202-266641 ( 39) TAGTAATGTGGAGATCATCGGTTCAAATCC 1 chrIX:210504-210860 ( 66) TAATAACGCGGGGATCAGCGGTTCGATCCC 1 chrV:135255-135696 ( 11) TCTTAATCATAAGGTTAGGGGTTCGAGCCC 1 chrVI:226568-226853 ( 39) TCTTAATCATAAGGTTAGGGGTTCGAGCCC 1 chrX:414823-414923 ( 26) TCTTAATCATAAGGTTAGGGGTTCGAGCCC 1 chrXIII:480496-480851 ( 9) TCTTAATCATAAGGTTAGGGGTTCGAGCCC 1 chrXII:734686-734971 ( 57) TAATAACGCGGGGATCAGCGGTTCGATCCC 1 chrVII:876222-876603 ( 64) TCTTAATCATAAGGTTAGGGGTTCGAGCCC 1 chrXV:854080-854407 ( 5) TTGCAAGGAAGAGGTCATCGGTTCGATTCC 1 chrIV:1175656-1176040 ( 63) TCATAATCTGAAGGTCGAGAGTTCGAACCT 1 chrX:422791-422891 ( 53) TCATAATCTGAAGGTCGAGAGTTCGAACCT 1 chrIV:359408-359821 ( 68) AGGATACCGAAATGTCAGGGGTTCGAGCCC 1 chrXI:578833-579202 ( 53) AGGATACCGAAATGTCAGGGGTTCGAGCCC 1 chrXVI:769028-769446 ( 31) AGGATACCGAAATGTCAGGGGTTCGAGCCC 1 chrXIII:183781-184109 ( 14) TTGCCATCGTTGGGCCCCCGGTTCGATTCC 1 chrX:531653-531753 ( 24) TTGCCATCGTTGGGCCCCCGGTTCGATTCC 1 chrXIII:321030-321343 ( 22) TAGCATGGGAGAGGTCTCCGGTTCGATTCC 1 chrXII:656820-657154 ( 8) TAGCATGGGAGAGGTCTCCGGTTCGATTCC 1 chrX:115776-115876 ( 25) CTTTCACCGTGGAGACCGGGGTTCGACTCC 1 chrV:487210-487554 ( 10) CTTTCACCGTGGAGACCGGGGTTCGACTCC 1 chrXI:140863-141269 ( 13) CTTTCACCGTGGAGACCGGGGTTCGACTCC 1 chrV:250139-250510 ( 43) TTTTGATCCGGACAACCCCGGTTCGAATCC 1 chrIII:168206-168516 ( 1) TTTTGATCCGGACAACCCCGGTTCGAATCC 1 chrXIV:546931-547345 ( 68) AAGCATGCGAGAGGCCCTGGGTTCAATTCC 1 chrVII:730971-731348 ( 61) TGTTAATCGCAAGATCGTGAGTTCAACCCT 1 chrXVI:744133-744496 ( 51) TTGTAATGCAAAGGTCGTTAGTTCAATTCT 1 chrIV:1075354-1075650 ( 31) TCACACGGCAAAGGTCCCGAGTTCGATCCT 1 chrIV:946179-946542 ( 50) ACGAAATCTTGAGATCGGGCGTTCGACTCG 1 chrXVI:775662-775988 ( 1) TGCAAATCTGTTGGTCCTTAGTTCGATCCT 1 chrIV:1095236-1095620 ( 3) AAGATATCTGGAGGTCCTGTGTTCGATCCA 1 chrVII:706966-707329 ( 22) TGCAAATCTGTTGGTCCTTAGTTCGATCCT 1 chrV:99966-100333 ( 65) TCATAACCCTGATGTCCTCGGATCGAAACC 1 chrXII:374218-374516 ( 70) TACGAACCAGAAGATTCCAGGTTCAAGTCC 1 chrXIII:504713-505184 ( 70) AGGTATCGTAAGATGCAAGAGTTCGAATCT 1 chrXIV:442855-443286 ( 59) AGGTATCGTAAGATGCAAGAGTTCGAATCT 1 chrXI:458386-458845 ( 65) AGGTATCGTAAGATGCAAGAGTTCGAATCT 1 chrI:180975-181411 ( 71) AGGTATCGTAAGATGCAAGAGTTCGAATCT 1 chrV:434402-434775 ( 14) TTGTGGCCGATGAAACCCTGGTTCGATTCT 1 chrIX:324156-324514 ( 29) TTGTCGCGTGCCAGATCGGGGTTCAATTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNGTAAYSDDRAGRTCMKSGGTTCGANYCC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42100 bayes= 9.4287 E= 2.7e-178 -67 -153 -1226 118 -29 21 21 1 -140 -11 147 -53 -118 -30 -311 110 118 -53 -153 -199 130 -311 -211 -118 -1226 89 -79 82 -1226 184 106 -1226 -40 -30 59 10 -18 -311 135 -40 54 -311 121 -166 110 -311 47 -299 -82 -211 198 -199 26 -1226 159 -199 -118 -153 -111 114 -1226 210 -1226 -40 71 89 -79 -299 -140 6 80 26 -398 89 170 -199 -53 -311 206 -398 -1226 -1226 250 -1226 -398 -1226 -1226 160 -1226 -1226 -1226 163 -1226 250 -1226 -1226 -53 -1226 214 -1226 163 -1226 -1226 -1226 -8 21 6 -8 -398 135 -1226 71 -1226 250 -1226 -1226 -398 202 -311 -40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNGTAAYSDDRAGRTCMKSGGTTCGANYCC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 49 E= 2.7e-178 0.204082 0.061224 0.000000 0.734694 0.265306 0.204082 0.204082 0.326531 0.122449 0.163265 0.489796 0.224490 0.142857 0.142857 0.020408 0.693878 0.734694 0.122449 0.061224 0.081633 0.795918 0.020408 0.040816 0.142857 0.000000 0.326531 0.102041 0.571429 0.000000 0.632653 0.367347 0.000000 0.244898 0.142857 0.265306 0.346939 0.285714 0.020408 0.448980 0.244898 0.469388 0.020408 0.408163 0.102041 0.693878 0.020408 0.244898 0.040816 0.183673 0.040816 0.693878 0.081633 0.387755 0.000000 0.530612 0.081633 0.142857 0.061224 0.081633 0.714286 0.000000 0.755102 0.000000 0.244898 0.530612 0.326531 0.102041 0.040816 0.122449 0.183673 0.306122 0.387755 0.020408 0.326531 0.571429 0.081633 0.224490 0.020408 0.734694 0.020408 0.000000 0.000000 1.000000 0.000000 0.020408 0.000000 0.000000 0.979592 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.224490 0.000000 0.775510 0.000000 1.000000 0.000000 0.000000 0.000000 0.306122 0.204082 0.183673 0.306122 0.020408 0.448980 0.000000 0.530612 0.000000 1.000000 0.000000 0.000000 0.020408 0.714286 0.020408 0.244898 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNGTAAYSDDRAGRTCMKSGGTTCGANYCC MEME-2 regular expression -------------------------------------------------------------------------------- [TA][TACG][GT]TAA[TC][CG][TGA][GAT][AG][AG]G[GA]T[CT][AC][TG][GC][GA]GTTC[GA]A[ATC][TC]C[CT] -------------------------------------------------------------------------------- Time 647.35 secs. ******************************************************************************** ******************************************************************************** MOTIF RDRRTGTAYGGRTGT MEME-3 width = 15 sites = 144 llr = 1550 E-value = 8.3e-163 ******************************************************************************** -------------------------------------------------------------------------------- Motif RDRRTGTAYGGRTGT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 4436:::7:1:4::1 pos.-specific C 11::::2:4:::::2 probability G 32431a:2:996:81 matrix T 232:9:815:1:926 bits 2.5 2.3 * 2.0 * * 1.8 * ** Relative 1.5 * ** * Entropy 1.3 ** ***** (15.5 bits) 1.0 *** ****** 0.8 *********** 0.5 ************* 0.3 * ************* 0.0 --------------- Multilevel AAGATGTATGGGTGT consensus GTAG GC A sequence GT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RDRRTGTAYGGRTGT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrIV:222012-222292 + 31 2.33e-09 AAATGAGATA AGGGTGTACGGGTGT GGTAACCGTC chrXIII:650865-651120 - 39 1.54e-08 AAAAAACTGT GAAATGTACGGGTGT AAAACAGTCT chrXI:614116-614466 - 62 1.54e-08 CCTTCACCTT GTGGTGTGCGGGTGT TGCAGTCATT chrX:157488-157588 + 47 2.87e-08 ATGGATGTAT AAAGTGTACGGGTGT AAACACATTG chrXIII:5366-5722 - 81 3.37e-08 GTGTT AGGGTGTGTGGGTGT GGTGTGTGGG chrVIII:562333-562609 + 43 4.61e-08 AAGTGTGGGT GTGGTGTGTGGGTGT GGGTGTGTGT chrIX:28-176 - 1 4.61e-08 TGGTGTGGGT GTGGTGTGTGGGTGT chrIII:32-306 - 85 4.61e-08 T GTGGTGTGTGGGTGT GGGTGTGGTG chrXIII:296803-297211 - 9 5.83e-08 AAAAAAGTTC TAGATGTATGGGTGT GCGGGTAA chrVI:64973-65321 + 68 7.87e-08 GTTATCTCTG AATATGTACGGGTGT TGACATGGAG chrXII:922168-922533 - 45 7.87e-08 CGAGAATTGG AATATGTACGGGTGT CAATTTCAAA chrV:6214-6518 - 33 7.87e-08 GAAGGTGAGC ATGGTGTGTGGGTGT GGGTGTGGGT chrXV:79799-80085 + 54 7.87e-08 TCACTTATTT AATATGTACGGGTGT TTACATGGAG chrII:89679-89933 + 43 7.87e-08 GGTGTTAAAG AGGGTGTATGGATGT AAAGTCACAA chrIV:525178-525296 + 14 9.13e-08 TATTTTTGGT GTAGTGTATGGGTGT TGTGAAAATA chrI:81984-82231 + 51 1.09e-07 TCATCTAGCG GAGGTGCACGGATGT ACCAACAGTT chrV:13290-13640 - 18 1.09e-07 TTGGATTTCT GAGAGGTATGGGTGT CATTTCCTTA chrXIII:145902-146258 - 54 1.38e-07 TGTATGGTGT ATGGTGTATGGATGT ACAAAAATGC chrXVI:404574-404924 - 7 1.38e-07 TTTTTTTAGA ATGATGCATGGGTGT GCAGCC chrXVI:794517-794735 - 79 1.66e-07 TAATATA AATATGTATGGGTGT TTGGAGATGT chrXIV:6592-6818 - 10 1.66e-07 GGTGTGGGTG TGGGTGTGTGGGTGT GGGTGTGGT chrXII:11129-11469 - 50 1.66e-07 TGTGTGGGTG TGGGTGTGTGGGTGT GGTGTGGGTG chrXIII:225375-225691 - 62 1.66e-07 AATAAAAAAT AGAATGTACGGATGT AATGCACGGA chrIX:68214-68488 - 49 1.89e-07 ATACATCTTA GTAATGTACGGATGT AATAAACTCA chrXII:5509-5857 - 80 1.89e-07 TGTAAG AGAGTGTGTGGGTGT GTGGTGTGTG chrIV:229535-229764 - 55 2.28e-07 TATAATCCTT CTGATGTACGGATGT TTTGTGTAAG chrII:592921-593263 + 41 2.28e-07 ATGGAGTTCA AAGATGTATGGATGC AAGAAAAGAG chrVIII:556715-557165 + 55 2.79e-07 TGTGTGTGTG GGTGTGTGTGGGTGT GGGTGTGGGT chrVI:4494-4912 - 37 2.79e-07 GTGTGGGTGT GGTGTGTGTGGGTGT GTGGGTATAT chrIV:1355732-1355995 + 24 2.79e-07 AAAAATACTA TAAATGTATGGGTGT AATTTTAACC chrXV:678877-679141 + 49 3.30e-07 ATGGGTCCAC AATATGTACGGATGT ATGGTCCCAA chrVI:223934-224174 + 51 3.30e-07 TGGGTCTAAG AGTATGTACGGATGT AAAAGAAAAC chrII:415527-415845 + 45 3.30e-07 TCTGGATGAC AAAATGCATGGGTGT AAAAAAGGAA chrVIII:125953-126285 - 33 3.74e-07 TGTAAAGATG TAGGTGTACGGATGC ATTAACGTCT chrXIII:732039-732397 - 38 3.74e-07 CCACACATGC GCGATGTGCGGATGT ATTATGTCTT chrV:53569-53904 - 33 3.74e-07 CCGAACACCA AATATGTGTGGGTGT CAAACAAAGA chrXIII:551398-551768 - 86 3.74e-07 . ATAATGTATGGGTGC CAATATGTAC chrII:45019-45314 - 54 4.32e-07 AAACATACAT AGAATGTACGGATGC ATGATTGTCT chrXII:282524-282840 - 25 5.12e-07 ACGGAGGGAA AAGATGTACAGGTGT AAAAAAGCAC chrXV:94487-94827 - 28 5.12e-07 ACCGAAGACA ATAATGCATGGGTGT TAATTCTATT chrX:607889-607989 - 32 5.12e-07 TGGGTTAAAA AGGATGTATGGATGG AGGGTTGGCA chrV:305732-306166 - 86 5.85e-07 . TAAATGTGTGGGTGT ACAGTCCCGA chrX:703318-703418 + 35 6.54e-07 AAATAAATAG TGGATGCATGGGTGC TTCCACGCGT chrV:85207-85385 - 54 6.54e-07 GGAATACATC GAGGGGTATGGGTGG ATGATATCAC chrVII:149164-149498 + 35 6.54e-07 TATGTATGGG TGGGTGTATGGATGC TGTAAGCACA chrVII:555339-555658 - 62 7.43e-07 CCAAACACCT TTAATGCACGGGTGT AAAAGGGATG chrVII:254100-254532 + 79 7.43e-07 TACATCTTTC AATATGCACGGGTGC AACCTCA chrXVI:406240-406524 - 39 7.43e-07 TTTGGAGGTG GAAAGGTACGGATGT TAAACTTCAT chrXVI:76404-76688 + 45 7.43e-07 AACACATCCG TGGATGTACGGGTGA AAATACAGTC chrVI:221785-222043 + 54 8.65e-07 TTGGGTGTTA AAAATGTACGGGTGA AAAAAGTCTT chrXII:262798-263126 - 53 8.65e-07 CAAATTAACA TAAATGTATGGATGT ATTATTAAAT chrXII:713149-713540 + 76 8.65e-07 TTTTTTTATA CATATGTACGGATGT GATAGTCTGC chrVII:726459-726732 - 42 8.65e-07 ATGGGTGTAT ATAGGGTATGGGTGT ACAGTTAATT chrXII:241636-241986 - 46 8.65e-07 GTTTACATTT TATATGTACGGATGT AAAAAGGGAA chrIV:341278-341598 + 53 8.65e-07 ACTGGGTGTT AAAATGTACGGATGG AAAAGTAGAC chrVII:788371-788731 + 26 9.64e-07 TTGGGTTTAG AGTATGCACGGATGT TGTAAGGAAT chrV:423120-423442 - 41 1.07e-06 TTGGGTGTAG AAGGTGTACGGAGGT AAATATGCAG chrXV:1028672-1029078 + 80 1.07e-06 GTAAACAAAT CAAATGTACGGATGC ACAATG chrV:140459-140832 + 78 1.23e-06 TCGGCATTGT AAAAGGTATGGGTGC TTTGTGCG chrXII:781482-781813 + 57 1.23e-06 TGGGTTTATG AAAATGCACGGATGC ATTTTCTCTA chrXII:522201-522412 - 47 1.23e-06 TGGAAAACCT TTTGTGTACGGATGT TTAGTTAATA chrIII:163466-163845 + 40 1.23e-06 CAGCCGCGGT TGGGTGCGTGGGTGC GGTAATTTAA chrXIII:500812-501162 - 39 1.23e-06 TAGCCTTATG ACTATGTACGGATGT TAGGCCGTCT chrX:75341-75441 + 53 1.23e-06 TTTTCAAATA GTGAGGTGTGGATGT ATAGAGGAAT chrXIV:302363-302496 - 42 1.23e-06 TATTATACAG GAAAGGTATGGATGT TACGGAAACA chrXVI:731962-732313 - 17 1.40e-06 CCAACCATCC TAAAGGTATGGGTGT ACTGACGATG chrVIII:74971-75394 - 21 1.40e-06 ACGGATGTAG AAAATGTACAGGTGT GAACTTGCAG chrXIV:444504-444746 + 44 1.40e-06 TACGGATTTA AAGAGGTACGGATGG AGACCGTAGA chrVII:438611-438879 + 61 1.40e-06 GTAACGTTCC AAAATGTATGGATGG TAAGGTCTTT chrVI:95539-95781 + 24 1.56e-06 TATACGCAGT CCGGTGTGTGGGTGC ATGACTGATT chrV:270397-270656 - 11 1.74e-06 CACATTTAGT GGTATGTATGGGTGA TAAATTTTTT chrVIII:148962-149260 + 19 1.95e-06 TTATAATCCA ATGGTGCATGGGTGA AAATGTATGG chrIV:1300947-1301314 - 29 1.95e-06 CCAAACATCC ACAGTGCACGGATGT TTGAAGGAAA chrIV:217225-217453 - 25 1.95e-06 ATTATAGAAT AAAATGTACGGGTTC AAAGCAGGGC chrXII:796457-796881 + 13 1.95e-06 GTTATTATCC AGGAGGCACGGATGC AAAAGATAGA chrIV:1450902-1451197 + 82 2.20e-06 TTAAAATACA AATATGTACAGGTGT TAAT chrXII:805583-805720 - 22 2.68e-06 ATCAAAATGT GAAATGTTCGGATGT TAAGCAGGCA chrXII:498521-498873 - 26 2.68e-06 AATTCCTTAC AGGATGCACGGAGGT AAACAGGAAA chrVII:534804-535266 + 17 2.68e-06 ATGGGTTACA CAAATGCACGGATGC ATATATAAAA chrXII:48680-49071 + 76 3.04e-06 AAGGGTGTCT AAGATGTACGGATCT TCATTGGGAT chrVIII:382967-383348 + 9 3.04e-06 GGGTGTAT CGGATGTTCGGATGT CACTGTCTTT chrIV:411330-411561 - 40 3.04e-06 CTTTGGGTGC CCGGGGTGTGGGTGT TTGATTTGTT chrIV:125270-125620 + 81 3.04e-06 ATAATTTGGT GCGGTGTATGGGTTC AAGTT chrXVI:302671-302965 - 61 3.04e-06 TGGGTGTTTT AGGATGTCTGGATGT ACAAGTTAGC chrIII:178372-178663 + 3 3.40e-06 GT AAAATGTACAGATGT TTATTAAGTC chrXIII:924193-924405 + 52 3.40e-06 TAGGGTAGTG TTAGGGTGTGGGTGT GGTGTGTGTG chrXV:505116-505458 - 57 3.40e-06 GATAAGGTTC ATTGTGTATGGGTTT GAAATGAATG chrI:32-165 - 4 3.40e-06 GGGTAGTGTT AGGATGTGTGTGTGT GGG chrIV:321704-321930 - 32 3.40e-06 AAAATAAAGA TTGGTGTACGGAGGT AAAGGTATGA chrXIII:124371-124694 + 29 3.40e-06 ATACATTTTA ATAATGTACGGATTT AATAGCAGTC chrIX:257401-257664 - 51 3.40e-06 TCACAACTTT GCGGTGTACAGATGT CGTCACATAC chrIV:1401269-1401570 - 64 3.40e-06 AAAAGGGTAA TATATGTGTGGGTGG AAAATGATTG chrII:604153-604450 - 50 3.40e-06 GCGAATATGA AAAATGTACAGATGT GTAAATGTAC chrVII:648963-649369 + 16 3.40e-06 ATTAAAAAAA GTAATGTATGGGTTC TCGTTGTACG chrVII:310484-310827 - 81 4.17e-06 GGTCC CTGGTGTACAGATGT TACATTGGTT chrIX:316131-316560 - 57 4.17e-06 GGTTTGTAAA ATAATGTATGGGTTC TAGTCTGAAA chrVII:277076-277363 - 58 4.17e-06 TCCCATAGAG CGGGTGTATGGGTCT AGCTTAAATA chrXV:968070-968420 + 72 4.17e-06 TCAAAAGCGT GGGGTGCGTGGGCGT GCGCTGCTCG chrXV:866593-866900 + 58 4.69e-06 AAGCATTCTG GGTTTGTATGGGTGT TACACCGGTT chrXI:313337-313654 - 51 5.22e-06 TTTATTCAAC CAGATGTGCAGATGT AACCAAAAAC chrIV:117172-117529 - 70 5.72e-06 TATGGGTGTA GATATGTATGGGTCT GAGATTAATA chrXI:67800-67960 - 83 5.72e-06 GAT GCGGTGCACGGATTT CAGCACGGGT chrXI:618809-619195 + 57 7.07e-06 ACAAATCTAT TAGAGGCACGGATGG AAATAGTATT chrXIII:733332-733429 + 63 8.54e-06 GTTTCTGTAT GTGGTGTACGGATTA TGTGTAACTG chrX:73395-73495 - 39 9.42e-06 TCTTTTCAGT GTGGTGCAAGGATGT ACAATGATGT chrXII:837835-838046 + 42 9.42e-06 ACAGGGCTTC CTAGTGTACAGATGT ATGTCGGATG chrXV:779733-780080 - 47 9.42e-06 TAAAAGGTAT GTGGGGTATGGGGGG GTGAAAAAAT chrXVI:188662-188904 - 57 9.42e-06 ACCATAGTAA CCGATGCATGGGTTT TAAAAGTCAC chrVIII:296945-297181 - 44 1.05e-05 AGAGCATGCT GTGATGTACTGGTGG ACGAAATTGT chrXI:666509-666772 + 70 1.05e-05 TGTGGTGTGG GTGTGGTGTGGGTGT GGTGTGGGTG chrXI:158233-158604 - 32 1.15e-05 ATTTATTTCC AGTGTGCACGGGTTG AAATAAATGA chrXVI:699985-700322 - 66 1.25e-05 TTTTGAAGCT ATGGTGTGTGGGGGA TCACTTGTGG chrVII:228459-228809 - 45 1.38e-05 CTGTTTTCCA GAAATGTTTGGGTTT ATTTTTTAAT chrIX:99680-100002 + 17 1.38e-05 GTTTCATGAA TAAATGTACTGGTGT TACATGGTGT chrXV:253861-254081 + 55 1.65e-05 ATTTATACGC GCGGTGTACGGATTA AAAAAGTTTT chrX:651252-651352 - 81 1.65e-05 AGACA AATATGTATGGGTTA AGAATAATTA chrVII:919987-920145 - 56 2.33e-05 TGGGTTTTTT AATATGTTTGGGTTT TTATCATATT chrXIV:241413-241687 - 63 2.33e-05 ACGTGTATTG ATGGTGTTTAGGTGC TGGATGTTGG chrX:90095-90195 - 49 3.23e-05 TGTATGGGTG AGAATGTCCAGGTGC AAATTGAAAA chrIII:255-490 - 36 3.49e-05 TAGTGTTAGG GTAGTGTTAGGGTGT GGGTGTGTGG chrIV:579076-579370 - 53 3.80e-05 AATTTTTTTA AAAATGTTTGGGTCT ACTTTATGGT chrXI:109680-110030 + 81 4.77e-05 TATTACAGGC TAAAGGTTTGGATGC TACTA chrXV:43-202 - 32 4.77e-05 GATTAGGGTA GTGTTGTGTGTGTGT GGGTGGTGTG chrXV:780549-780793 + 84 5.96e-05 CTTGGTTAGC TTAATGTATAGGTTC TT chrVII:479407-479665 + 3 6.43e-05 TT GAAATGTGCGTGTTG TGAATTGTGC chrVIII:103931-104264 - 10 7.44e-05 AAAATAACAA AAAATGTGTGGGCTG AAAACCGTC chrIV:556274-556624 + 80 8.58e-05 CCATTTTTAG TTTATGTATGTGTTT TTTGTA chrII:165066-165416 - 66 9.22e-05 GTGCTCTAAC GCGGTGTATGGGCTA GATTCGTAAT chrIV:492288-492638 + 49 9.22e-05 TCACCTTGTA ATGATGGGTGGATTT GCATTCTTCT chrXV:911386-911736 + 23 9.86e-05 ATTATAAAAT AGAATGCACAGGTTA TCTTGTTTGG chrVII:346002-346352 + 60 1.13e-04 GGTTTACCTT CGTGTGCCCGGATGA GGACCGTTGC chrII:45782-46132 - 74 1.13e-04 CAATCTTTGG GTGAGGTAAGGAGGC CATCTAATCA chrII:301252-301602 + 8 1.38e-04 GTTATGT TTAATGTATATATGT TGATGTTCGA chrV:307155-307505 + 21 1.38e-04 ATAATTTTAA GAGATCCGTGGATTC ATTTCGTAAT chrXI:84045-84296 + 79 1.48e-04 CAGTAAGTAA AATTTGTATGGAGGG TTGGCCG chrXV:281967-282300 + 48 1.48e-04 ATCGCTTAAA TAGAGGAGTGGATGC TCAGGATAAC chrXIV:631796-632067 - 78 1.78e-04 TGTGGTTG ATGATCTATTGATGT TGAGGTACCA chrXIV:500427-500749 - 54 1.78e-04 AAGAACAAGA GAAAGCTACGGGTAT GATTGCAAGA chrVII:89677-90027 - 30 1.78e-04 TCAATTCTTA CATATGTATATGTGG AGAACTTGAA chrV:420635-420985 - 32 1.90e-04 AACATACACA TATATGCGTGCATGT TGGCAAGGGT chrX:701717-701817 - 40 2.02e-04 ATATATATAT TAGGTGTGTGTATAT ATATCCGTAT chrXII:711032-711382 + 46 2.57e-04 ATTTCCTTCA GATATGTATGTATAC TGTCTAAAGT chrXV:966062-966412 - 10 2.72e-04 CTACACATAT ATAATGTATATGCGT TACATATCC chrXIV:663570-663920 + 77 2.72e-04 AAAGAGCGCA TGTATGTGTAGATAT GTACATATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RDRRTGTAYGGRTGT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:222012-222292 2.3e-09 30_[+3]_55 chrXIII:650865-651120 1.5e-08 38_[-3]_47 chrXI:614116-614466 1.5e-08 61_[-3]_24 chrX:157488-157588 2.9e-08 46_[+3]_39 chrXIII:5366-5722 3.4e-08 80_[-3]_5 chrVIII:562333-562609 4.6e-08 42_[+3]_43 chrIX:28-176 4.6e-08 [-3]_85 chrIII:32-306 4.6e-08 84_[-3]_1 chrXIII:296803-297211 5.8e-08 8_[-3]_77 chrVI:64973-65321 7.9e-08 67_[+3]_18 chrXII:922168-922533 7.9e-08 44_[-3]_41 chrV:6214-6518 7.9e-08 32_[-3]_53 chrXV:79799-80085 7.9e-08 53_[+3]_32 chrII:89679-89933 7.9e-08 42_[+3]_43 chrIV:525178-525296 9.1e-08 13_[+3]_72 chrI:81984-82231 1.1e-07 50_[+3]_35 chrV:13290-13640 1.1e-07 17_[-3]_68 chrXIII:145902-146258 1.4e-07 53_[-3]_32 chrXVI:404574-404924 1.4e-07 6_[-3]_79 chrXVI:794517-794735 1.7e-07 78_[-3]_7 chrXIV:6592-6818 1.7e-07 9_[-3]_76 chrXII:11129-11469 1.7e-07 49_[-3]_36 chrXIII:225375-225691 1.7e-07 61_[-3]_24 chrIX:68214-68488 1.9e-07 48_[-3]_37 chrXII:5509-5857 1.9e-07 79_[-3]_6 chrIV:229535-229764 2.3e-07 54_[-3]_31 chrII:592921-593263 2.3e-07 40_[+3]_45 chrVIII:556715-557165 2.8e-07 54_[+3]_31 chrVI:4494-4912 2.8e-07 36_[-3]_49 chrIV:1355732-1355995 2.8e-07 23_[+3]_62 chrXV:678877-679141 3.3e-07 48_[+3]_37 chrVI:223934-224174 3.3e-07 50_[+3]_35 chrII:415527-415845 3.3e-07 44_[+3]_41 chrVIII:125953-126285 3.7e-07 32_[-3]_53 chrXIII:732039-732397 3.7e-07 37_[-3]_48 chrV:53569-53904 3.7e-07 32_[-3]_53 chrXIII:551398-551768 3.7e-07 85_[-3] chrII:45019-45314 4.3e-07 53_[-3]_32 chrXII:282524-282840 5.1e-07 24_[-3]_61 chrXV:94487-94827 5.1e-07 27_[-3]_58 chrX:607889-607989 5.1e-07 31_[-3]_54 chrV:305732-306166 5.9e-07 85_[-3] chrX:703318-703418 6.5e-07 34_[+3]_51 chrV:85207-85385 6.5e-07 53_[-3]_32 chrVII:149164-149498 6.5e-07 34_[+3]_51 chrVII:555339-555658 7.4e-07 61_[-3]_24 chrVII:254100-254532 7.4e-07 78_[+3]_7 chrXVI:406240-406524 7.4e-07 38_[-3]_47 chrXVI:76404-76688 7.4e-07 44_[+3]_41 chrVI:221785-222043 8.6e-07 53_[+3]_32 chrXII:262798-263126 8.6e-07 52_[-3]_33 chrXII:713149-713540 8.6e-07 75_[+3]_10 chrVII:726459-726732 8.6e-07 41_[-3]_44 chrXII:241636-241986 8.6e-07 45_[-3]_40 chrIV:341278-341598 8.6e-07 52_[+3]_33 chrVII:788371-788731 9.6e-07 25_[+3]_60 chrV:423120-423442 1.1e-06 40_[-3]_45 chrXV:1028672-1029078 1.1e-06 79_[+3]_6 chrV:140459-140832 1.2e-06 77_[+3]_8 chrXII:781482-781813 1.2e-06 56_[+3]_29 chrXII:522201-522412 1.2e-06 46_[-3]_39 chrIII:163466-163845 1.2e-06 39_[+3]_46 chrXIII:500812-501162 1.2e-06 38_[-3]_47 chrX:75341-75441 1.2e-06 52_[+3]_33 chrXIV:302363-302496 1.2e-06 41_[-3]_44 chrXVI:731962-732313 1.4e-06 16_[-3]_69 chrVIII:74971-75394 1.4e-06 20_[-3]_65 chrXIV:444504-444746 1.4e-06 43_[+3]_42 chrVII:438611-438879 1.4e-06 60_[+3]_25 chrVI:95539-95781 1.6e-06 23_[+3]_62 chrV:270397-270656 1.7e-06 10_[-3]_75 chrVIII:148962-149260 1.9e-06 18_[+3]_67 chrIV:1300947-1301314 1.9e-06 28_[-3]_57 chrIV:217225-217453 1.9e-06 24_[-3]_61 chrXII:796457-796881 1.9e-06 12_[+3]_73 chrIV:1450902-1451197 2.2e-06 81_[+3]_4 chrXII:805583-805720 2.7e-06 21_[-3]_64 chrXII:498521-498873 2.7e-06 25_[-3]_60 chrVII:534804-535266 2.7e-06 16_[+3]_69 chrXII:48680-49071 3e-06 75_[+3]_10 chrVIII:382967-383348 3e-06 8_[+3]_77 chrIV:411330-411561 3e-06 39_[-3]_46 chrIV:125270-125620 3e-06 80_[+3]_5 chrXVI:302671-302965 3e-06 60_[-3]_25 chrIII:178372-178663 3.4e-06 2_[+3]_83 chrXIII:924193-924405 3.4e-06 51_[+3]_34 chrXV:505116-505458 3.4e-06 56_[-3]_29 chrI:32-165 3.4e-06 3_[-3]_82 chrIV:321704-321930 3.4e-06 31_[-3]_54 chrXIII:124371-124694 3.4e-06 28_[+3]_57 chrIX:257401-257664 3.4e-06 50_[-3]_35 chrIV:1401269-1401570 3.4e-06 63_[-3]_22 chrII:604153-604450 3.4e-06 49_[-3]_36 chrVII:648963-649369 3.4e-06 15_[+3]_70 chrVII:310484-310827 4.2e-06 80_[-3]_5 chrIX:316131-316560 4.2e-06 56_[-3]_29 chrVII:277076-277363 4.2e-06 57_[-3]_28 chrXV:968070-968420 4.2e-06 71_[+3]_14 chrXV:866593-866900 4.7e-06 57_[+3]_28 chrXI:313337-313654 5.2e-06 50_[-3]_35 chrIV:117172-117529 5.7e-06 69_[-3]_16 chrXI:67800-67960 5.7e-06 82_[-3]_3 chrXI:618809-619195 7.1e-06 56_[+3]_29 chrXIII:733332-733429 8.5e-06 62_[+3]_20 chrX:73395-73495 9.4e-06 38_[-3]_47 chrXII:837835-838046 9.4e-06 41_[+3]_44 chrXV:779733-780080 9.4e-06 46_[-3]_39 chrXVI:188662-188904 9.4e-06 56_[-3]_29 chrVIII:296945-297181 1e-05 43_[-3]_42 chrXI:666509-666772 1e-05 69_[+3]_16 chrXI:158233-158604 1.1e-05 31_[-3]_54 chrXVI:699985-700322 1.3e-05 65_[-3]_20 chrVII:228459-228809 1.4e-05 44_[-3]_41 chrIX:99680-100002 1.4e-05 16_[+3]_69 chrXV:253861-254081 1.7e-05 54_[+3]_31 chrX:651252-651352 1.7e-05 80_[-3]_5 chrVII:919987-920145 2.3e-05 55_[-3]_30 chrXIV:241413-241687 2.3e-05 62_[-3]_23 chrX:90095-90195 3.2e-05 48_[-3]_37 chrIII:255-490 3.5e-05 35_[-3]_50 chrIV:579076-579370 3.8e-05 52_[-3]_33 chrXI:109680-110030 4.8e-05 80_[+3]_5 chrXV:43-202 4.8e-05 31_[-3]_54 chrXV:780549-780793 6e-05 83_[+3]_2 chrVII:479407-479665 6.4e-05 2_[+3]_83 chrVIII:103931-104264 7.4e-05 9_[-3]_76 chrIV:556274-556624 8.6e-05 79_[+3]_6 chrII:165066-165416 9.2e-05 65_[-3]_20 chrIV:492288-492638 9.2e-05 48_[+3]_37 chrXV:911386-911736 9.9e-05 22_[+3]_63 chrVII:346002-346352 0.00011 59_[+3]_26 chrII:45782-46132 0.00011 73_[-3]_12 chrII:301252-301602 0.00014 7_[+3]_78 chrV:307155-307505 0.00014 20_[+3]_65 chrXI:84045-84296 0.00015 78_[+3]_7 chrXV:281967-282300 0.00015 47_[+3]_38 chrXIV:631796-632067 0.00018 77_[-3]_8 chrXIV:500427-500749 0.00018 53_[-3]_32 chrVII:89677-90027 0.00018 29_[-3]_56 chrV:420635-420985 0.00019 31_[-3]_54 chrX:701717-701817 0.0002 39_[-3]_46 chrXII:711032-711382 0.00026 45_[+3]_40 chrXV:966062-966412 0.00027 9_[-3]_76 chrXIV:663570-663920 0.00027 76_[+3]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RDRRTGTAYGGRTGT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RDRRTGTAYGGRTGT width=15 seqs=144 chrIV:222012-222292 ( 31) AGGGTGTACGGGTGT 1 chrXIII:650865-651120 ( 39) GAAATGTACGGGTGT 1 chrXI:614116-614466 ( 62) GTGGTGTGCGGGTGT 1 chrX:157488-157588 ( 47) AAAGTGTACGGGTGT 1 chrXIII:5366-5722 ( 81) AGGGTGTGTGGGTGT 1 chrVIII:562333-562609 ( 43) GTGGTGTGTGGGTGT 1 chrIX:28-176 ( 1) GTGGTGTGTGGGTGT 1 chrIII:32-306 ( 85) GTGGTGTGTGGGTGT 1 chrXIII:296803-297211 ( 9) TAGATGTATGGGTGT 1 chrVI:64973-65321 ( 68) AATATGTACGGGTGT 1 chrXII:922168-922533 ( 45) AATATGTACGGGTGT 1 chrV:6214-6518 ( 33) ATGGTGTGTGGGTGT 1 chrXV:79799-80085 ( 54) AATATGTACGGGTGT 1 chrII:89679-89933 ( 43) AGGGTGTATGGATGT 1 chrIV:525178-525296 ( 14) GTAGTGTATGGGTGT 1 chrI:81984-82231 ( 51) GAGGTGCACGGATGT 1 chrV:13290-13640 ( 18) GAGAGGTATGGGTGT 1 chrXIII:145902-146258 ( 54) ATGGTGTATGGATGT 1 chrXVI:404574-404924 ( 7) ATGATGCATGGGTGT 1 chrXVI:794517-794735 ( 79) AATATGTATGGGTGT 1 chrXIV:6592-6818 ( 10) TGGGTGTGTGGGTGT 1 chrXII:11129-11469 ( 50) TGGGTGTGTGGGTGT 1 chrXIII:225375-225691 ( 62) AGAATGTACGGATGT 1 chrIX:68214-68488 ( 49) GTAATGTACGGATGT 1 chrXII:5509-5857 ( 80) AGAGTGTGTGGGTGT 1 chrIV:229535-229764 ( 55) CTGATGTACGGATGT 1 chrII:592921-593263 ( 41) AAGATGTATGGATGC 1 chrVIII:556715-557165 ( 55) GGTGTGTGTGGGTGT 1 chrVI:4494-4912 ( 37) GGTGTGTGTGGGTGT 1 chrIV:1355732-1355995 ( 24) TAAATGTATGGGTGT 1 chrXV:678877-679141 ( 49) AATATGTACGGATGT 1 chrVI:223934-224174 ( 51) AGTATGTACGGATGT 1 chrII:415527-415845 ( 45) AAAATGCATGGGTGT 1 chrVIII:125953-126285 ( 33) TAGGTGTACGGATGC 1 chrXIII:732039-732397 ( 38) GCGATGTGCGGATGT 1 chrV:53569-53904 ( 33) AATATGTGTGGGTGT 1 chrXIII:551398-551768 ( 86) ATAATGTATGGGTGC 1 chrII:45019-45314 ( 54) AGAATGTACGGATGC 1 chrXII:282524-282840 ( 25) AAGATGTACAGGTGT 1 chrXV:94487-94827 ( 28) ATAATGCATGGGTGT 1 chrX:607889-607989 ( 32) AGGATGTATGGATGG 1 chrV:305732-306166 ( 86) TAAATGTGTGGGTGT 1 chrX:703318-703418 ( 35) TGGATGCATGGGTGC 1 chrV:85207-85385 ( 54) GAGGGGTATGGGTGG 1 chrVII:149164-149498 ( 35) TGGGTGTATGGATGC 1 chrVII:555339-555658 ( 62) TTAATGCACGGGTGT 1 chrVII:254100-254532 ( 79) AATATGCACGGGTGC 1 chrXVI:406240-406524 ( 39) GAAAGGTACGGATGT 1 chrXVI:76404-76688 ( 45) TGGATGTACGGGTGA 1 chrVI:221785-222043 ( 54) AAAATGTACGGGTGA 1 chrXII:262798-263126 ( 53) TAAATGTATGGATGT 1 chrXII:713149-713540 ( 76) CATATGTACGGATGT 1 chrVII:726459-726732 ( 42) ATAGGGTATGGGTGT 1 chrXII:241636-241986 ( 46) TATATGTACGGATGT 1 chrIV:341278-341598 ( 53) AAAATGTACGGATGG 1 chrVII:788371-788731 ( 26) AGTATGCACGGATGT 1 chrV:423120-423442 ( 41) AAGGTGTACGGAGGT 1 chrXV:1028672-1029078 ( 80) CAAATGTACGGATGC 1 chrV:140459-140832 ( 78) AAAAGGTATGGGTGC 1 chrXII:781482-781813 ( 57) AAAATGCACGGATGC 1 chrXII:522201-522412 ( 47) TTTGTGTACGGATGT 1 chrIII:163466-163845 ( 40) TGGGTGCGTGGGTGC 1 chrXIII:500812-501162 ( 39) ACTATGTACGGATGT 1 chrX:75341-75441 ( 53) GTGAGGTGTGGATGT 1 chrXIV:302363-302496 ( 42) GAAAGGTATGGATGT 1 chrXVI:731962-732313 ( 17) TAAAGGTATGGGTGT 1 chrVIII:74971-75394 ( 21) AAAATGTACAGGTGT 1 chrXIV:444504-444746 ( 44) AAGAGGTACGGATGG 1 chrVII:438611-438879 ( 61) AAAATGTATGGATGG 1 chrVI:95539-95781 ( 24) CCGGTGTGTGGGTGC 1 chrV:270397-270656 ( 11) GGTATGTATGGGTGA 1 chrVIII:148962-149260 ( 19) ATGGTGCATGGGTGA 1 chrIV:1300947-1301314 ( 29) ACAGTGCACGGATGT 1 chrIV:217225-217453 ( 25) AAAATGTACGGGTTC 1 chrXII:796457-796881 ( 13) AGGAGGCACGGATGC 1 chrIV:1450902-1451197 ( 82) AATATGTACAGGTGT 1 chrXII:805583-805720 ( 22) GAAATGTTCGGATGT 1 chrXII:498521-498873 ( 26) AGGATGCACGGAGGT 1 chrVII:534804-535266 ( 17) CAAATGCACGGATGC 1 chrXII:48680-49071 ( 76) AAGATGTACGGATCT 1 chrVIII:382967-383348 ( 9) CGGATGTTCGGATGT 1 chrIV:411330-411561 ( 40) CCGGGGTGTGGGTGT 1 chrIV:125270-125620 ( 81) GCGGTGTATGGGTTC 1 chrXVI:302671-302965 ( 61) AGGATGTCTGGATGT 1 chrIII:178372-178663 ( 3) AAAATGTACAGATGT 1 chrXIII:924193-924405 ( 52) TTAGGGTGTGGGTGT 1 chrXV:505116-505458 ( 57) ATTGTGTATGGGTTT 1 chrI:32-165 ( 4) AGGATGTGTGTGTGT 1 chrIV:321704-321930 ( 32) TTGGTGTACGGAGGT 1 chrXIII:124371-124694 ( 29) ATAATGTACGGATTT 1 chrIX:257401-257664 ( 51) GCGGTGTACAGATGT 1 chrIV:1401269-1401570 ( 64) TATATGTGTGGGTGG 1 chrII:604153-604450 ( 50) AAAATGTACAGATGT 1 chrVII:648963-649369 ( 16) GTAATGTATGGGTTC 1 chrVII:310484-310827 ( 81) CTGGTGTACAGATGT 1 chrIX:316131-316560 ( 57) ATAATGTATGGGTTC 1 chrVII:277076-277363 ( 58) CGGGTGTATGGGTCT 1 chrXV:968070-968420 ( 72) GGGGTGCGTGGGCGT 1 chrXV:866593-866900 ( 58) GGTTTGTATGGGTGT 1 chrXI:313337-313654 ( 51) CAGATGTGCAGATGT 1 chrIV:117172-117529 ( 70) GATATGTATGGGTCT 1 chrXI:67800-67960 ( 83) GCGGTGCACGGATTT 1 chrXI:618809-619195 ( 57) TAGAGGCACGGATGG 1 chrXIII:733332-733429 ( 63) GTGGTGTACGGATTA 1 chrX:73395-73495 ( 39) GTGGTGCAAGGATGT 1 chrXII:837835-838046 ( 42) CTAGTGTACAGATGT 1 chrXV:779733-780080 ( 47) GTGGGGTATGGGGGG 1 chrXVI:188662-188904 ( 57) CCGATGCATGGGTTT 1 chrVIII:296945-297181 ( 44) GTGATGTACTGGTGG 1 chrXI:666509-666772 ( 70) GTGTGGTGTGGGTGT 1 chrXI:158233-158604 ( 32) AGTGTGCACGGGTTG 1 chrXVI:699985-700322 ( 66) ATGGTGTGTGGGGGA 1 chrVII:228459-228809 ( 45) GAAATGTTTGGGTTT 1 chrIX:99680-100002 ( 17) TAAATGTACTGGTGT 1 chrXV:253861-254081 ( 55) GCGGTGTACGGATTA 1 chrX:651252-651352 ( 81) AATATGTATGGGTTA 1 chrVII:919987-920145 ( 56) AATATGTTTGGGTTT 1 chrXIV:241413-241687 ( 63) ATGGTGTTTAGGTGC 1 chrX:90095-90195 ( 49) AGAATGTCCAGGTGC 1 chrIII:255-490 ( 36) GTAGTGTTAGGGTGT 1 chrIV:579076-579370 ( 53) AAAATGTTTGGGTCT 1 chrXI:109680-110030 ( 81) TAAAGGTTTGGATGC 1 chrXV:43-202 ( 32) GTGTTGTGTGTGTGT 1 chrXV:780549-780793 ( 84) TTAATGTATAGGTTC 1 chrVII:479407-479665 ( 3) GAAATGTGCGTGTTG 1 chrVIII:103931-104264 ( 10) AAAATGTGTGGGCTG 1 chrIV:556274-556624 ( 80) TTTATGTATGTGTTT 1 chrII:165066-165416 ( 66) GCGGTGTATGGGCTA 1 chrIV:492288-492638 ( 49) ATGATGGGTGGATTT 1 chrXV:911386-911736 ( 23) AGAATGCACAGGTTA 1 chrVII:346002-346352 ( 60) CGTGTGCCCGGATGA 1 chrII:45782-46132 ( 74) GTGAGGTAAGGAGGC 1 chrII:301252-301602 ( 8) TTAATGTATATATGT 1 chrV:307155-307505 ( 21) GAGATCCGTGGATTC 1 chrXI:84045-84296 ( 79) AATTTGTATGGAGGG 1 chrXV:281967-282300 ( 48) TAGAGGAGTGGATGC 1 chrXIV:631796-632067 ( 78) ATGATCTATTGATGT 1 chrXIV:500427-500749 ( 54) GAAAGCTACGGGTAT 1 chrVII:89677-90027 ( 30) CATATGTATATGTGG 1 chrV:420635-420985 ( 32) TATATGCGTGCATGT 1 chrX:701717-701817 ( 40) TAGGTGTGTGTATAT 1 chrXII:711032-711382 ( 46) GATATGTATGTATAC 1 chrXV:966062-966412 ( 10) ATAATGTATATGCGT 1 chrXIV:663570-663920 ( 77) TGTATGTGTAGATAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RDRRTGTAYGGRTGT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51010 bayes= 7.76397 E= 8.3e-163 41 -86 66 -74 39 -121 29 -19 7 -1381 133 -59 97 -1381 95 -354 -1381 -1381 -42 142 -1381 -308 247 -1381 -554 -2 -466 133 109 -308 42 -254 -396 129 -1381 76 -146 -1381 229 -396 -1381 -466 240 -237 43 -1381 167 -1381 -1381 -267 -186 151 -354 -267 217 -108 -208 3 -86 100 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RDRRTGTAYGGRTGT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 144 E= 8.3e-163 0.430556 0.097222 0.277778 0.194444 0.423611 0.076389 0.215278 0.284722 0.340278 0.000000 0.444444 0.215278 0.631944 0.000000 0.340278 0.027778 0.000000 0.000000 0.131944 0.868056 0.000000 0.020833 0.979167 0.000000 0.006944 0.173611 0.006944 0.812500 0.687500 0.020833 0.236111 0.055556 0.020833 0.430556 0.000000 0.548611 0.118056 0.000000 0.861111 0.020833 0.000000 0.006944 0.930556 0.062500 0.437500 0.000000 0.562500 0.000000 0.000000 0.027778 0.048611 0.923611 0.027778 0.027778 0.791667 0.152778 0.076389 0.180556 0.097222 0.645833 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RDRRTGTAYGGRTGT MEME-3 regular expression -------------------------------------------------------------------------------- [AG][ATG][GAT][AG]TGT[AG][TC]GG[GA]TGT -------------------------------------------------------------------------------- Time 946.75 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:415527-415845 1.12e-03 28_[+3(4.11e-05)]_1_[+3(3.30e-07)]_\ 41 chrXV:980501-980941 8.85e-07 11_[-1(1.34e-07)]_59 chrXI:309467-309817 2.76e-01 100 chrX:354073-354173 6.35e-01 100 chrXI:67800-67960 1.42e-03 82_[-3(5.72e-06)]_3 chrXII:796457-796881 4.51e-03 12_[+3(1.95e-06)]_73 chrII:266202-266641 2.50e-16 6_[-1(1.95e-11)]_2_[+2(9.22e-13)]_\ 32 chrII:228751-229101 9.53e-01 100 chrXVI:928369-928719 2.55e-01 100 chrXVI:689379-689736 3.72e-08 57_[-1(1.64e-12)]_13 chrIV:1305463-1305817 7.62e-08 39_[-1(6.01e-12)]_31 chrXIII:888776-888875 4.20e-01 99 chrII:36231-36538 6.39e-06 63_[-1(4.85e-10)]_7 chrXVI:76404-76688 2.22e-04 44_[+3(7.43e-07)]_41 chrXII:730238-730588 8.72e-01 100 chrXVI:302671-302965 8.23e-03 60_[-3(3.04e-06)]_25 chrM:59433-59783 2.60e-01 100 chrIV:1150712-1151126 2.67e-08 42_[+1(8.15e-12)]_28 chrIV:356631-356981 1.72e-01 100 chrXIV:102543-102841 5.63e-01 100 chrVII:227532-227882 8.05e-01 100 chrVII:876222-876603 2.14e-16 31_[-1(6.52e-11)]_2_[+2(1.07e-12)]_\ 7 chrII:592921-593263 1.25e-03 23_[+3(1.38e-05)]_2_[+3(2.28e-07)]_\ 45 chrIII:292649-292880 2.68e-01 100 chrXII:812157-812507 8.48e-01 100 chrXII:793753-794079 5.59e-02 51_[-1(6.75e-05)]_19 chrXV:418336-418686 7.09e-01 100 chrVII:727794-728144 3.78e-01 100 chrV:270397-270656 4.08e-03 10_[-3(1.74e-06)]_24_[-3(1.65e-05)]_\ 36 chrVII:89677-90027 1.10e-01 100 chrVII:25351-25701 6.00e-01 100 chrXV:353972-354263 2.72e-07 16_[+1(1.95e-11)]_54 chrXII:639949-640299 8.17e-01 100 chrXI:158233-158604 6.54e-03 31_[-3(1.15e-05)]_6_[-3(3.49e-05)]_\ 33 chrXIII:379195-379549 2.09e-01 100 chrXI:415249-415599 6.36e-01 100 chrXIII:572767-573162 4.40e-05 11_[+1(8.70e-09)]_59 chrVII:702232-702582 4.44e-01 100 chrXIII:372354-372700 2.89e-06 11_[+1(5.40e-10)]_59 chrVII:364916-365266 9.78e-01 100 chrXII:656820-657154 1.51e-16 7_[-2(2.27e-10)]_2_[+1(2.14e-13)]_\ 31 chrVII:882511-882823 4.25e-01 100 chrIV:645091-645383 5.27e-02 15_[+1(8.91e-05)]_55 chrXII:734686-734971 4.50e-18 23_[-1(3.19e-13)]_3_[+2(1.07e-12)]_\ 14 chrXV:904369-904719 6.61e-01 100 chrVII:559328-559678 9.15e-01 100 chrV:301569-301919 9.19e-01 100 chrXVI:575733-576083 8.80e-01 100 chrVII:149164-149498 6.73e-04 34_[+3(6.54e-07)]_51 chrM:59634-59984 9.48e-01 100 chrXIV:415540-415890 3.84e-01 100 chrVII:706966-707329 2.96e-06 21_[-2(8.96e-09)]_49 chrIV:1357630-1357980 6.10e-01 100 chrIX:316857-317207 9.73e-01 100 chrXV:281967-282300 2.44e-01 100 chrXIV:302363-302496 7.99e-04 41_[-3(1.23e-06)]_44 chrIV:217225-217453 4.35e-04 24_[-3(1.95e-06)]_61 chrIV:1461634-1462030 7.98e-06 17_[+1(2.72e-09)]_53 chrV:269153-269503 9.53e-01 100 chrV:435709-435993 4.95e-01 100 chrXI:334146-334288 9.89e-01 100 chrIV:541659-541756 7.62e-01 97 chrVII:557407-557527 7.34e-01 100 chrVII:724-1028 7.53e-01 100 chrXIII:837751-838107 3.36e-01 100 chrVII:438611-438879 1.61e-03 37_[+3(3.75e-06)]_8_[+3(1.40e-06)]_\ 25 chrV:61614-62127 3.73e-02 100 chrXI:218362-218712 9.14e-01 100 chrXIV:505446-505796 7.63e-01 100 chrXIII:5366-5722 2.43e-09 47_[+1(8.70e-09)]_3_[-3(3.37e-08)]_\ 5 chrIV:125270-125620 5.47e-03 80_[+3(3.04e-06)]_5 chrVI:223934-224174 3.45e-04 50_[+3(3.30e-07)]_35 chrXII:84291-84382 7.02e-01 91 chrVII:785267-785617 8.39e-01 100 chrII:220810-221160 6.57e-01 100 chrIX:99680-100002 2.21e-02 16_[+3(1.38e-05)]_69 chrIII:32-306 3.25e-09 1_[-3(2.79e-07)]_[+1(8.70e-09)]_1_\ [-3(2.79e-07)]_22_[-3(4.61e-08)]_1 chrVII:482684-482968 1.00e+00 100 chrI:180975-181411 3.82e-04 70_[+2(5.84e-08)] chrVII:700534-701240 6.03e-01 100 chrXIII:225375-225691 4.68e-04 61_[-3(1.66e-07)]_24 chrXVI:215625-215975 5.77e-01 100 chrX:422791-422891 2.51e-12 20_[-1(8.70e-09)]_2_[+2(6.20e-11)]_\ 18 chrIV:507699-508049 4.74e-01 100 chrV:492309-492580 1.28e-05 [+1(2.98e-09)]_70 chrX:172773-172873 2.20e-01 100 chrXII:708061-708411 9.49e-01 100 chrIV:309354-309704 5.35e-01 100 chrXIII:835529-835879 7.54e-01 100 chrXV:113656-113984 2.50e-16 31_[-1(1.95e-11)]_2_[+2(9.22e-13)]_\ 7 chrIV:914949-915248 3.27e-01 100 chrX:651252-651352 2.37e-02 80_[-3(1.65e-05)]_5 chrXVI:776493-776843 7.36e-01 100 chrXVI:188662-188904 9.78e-04 56_[-3(9.42e-06)]_29 chrXII:233892-234242 4.25e-01 100 chrIV:1355732-1355995 5.13e-04 23_[+3(2.79e-07)]_9_[+3(8.65e-07)]_\ 38 chrXVI:781323-781673 9.81e-01 100 chrVII:479407-479665 2.61e-02 2_[+3(6.43e-05)]_83 chrII:45782-46132 1.55e-01 100 chrV:99966-100333 2.86e-06 64_[+2(1.39e-08)]_6 chrXV:571754-572110 5.15e-01 100 chrX:73959-74059 7.01e-01 100 chrXV:622240-622590 7.88e-01 100 chrXV:900146-900496 4.52e-01 100 chrXII:794181-794788 1.11e-01 100 chrV:307358-307708 1.67e-01 100 chrX:157488-157588 1.67e-04 29_[+3(4.61e-08)]_2_[+3(2.87e-08)]_\ 39 chrIV:509369-509719 9.42e-01 100 chrXVI:378005-378355 3.51e-01 100 chrXII:636466-636816 9.93e-01 100 chrVII:648963-649369 1.64e-02 15_[+3(3.40e-06)]_[+3(1.38e-05)]_55 chrXIV:96170-96469 8.05e-02 13_[+1(7.88e-05)]_57 chrVII:823303-823646 8.42e-07 57_[-1(5.40e-10)]_13 chrXIV:444504-444746 5.14e-03 27_[+3(3.40e-06)]_1_[+3(1.40e-06)]_\ 42 chrX:355170-355270 1.43e-01 100 chrVII:278567-278917 5.26e-01 100 chrIV:171029-171379 8.13e-01 100 chrVII:365463-365813 8.49e-01 100 chrXII:1019029-1019365 2.18e-01 100 chrVII:37482-37832 4.38e-01 100 chrII:89679-89933 4.23e-04 22_[+3(3.75e-06)]_5_[+3(7.87e-08)]_\ 43 chrXIV:230551-230901 9.96e-01 100 chrXI:84045-84296 1.56e-02 100 chrXV:779733-780080 7.93e-03 6_[+3(4.41e-05)]_25_[-3(9.42e-06)]_\ 39 chrVI:101204-101507 1.02e-05 70_[-1(1.03e-08)] chrIV:519570-519880 6.06e-05 67_[-1(3.62e-08)]_3 chrXIII:272569-272919 2.14e-01 100 chrX:75341-75441 1.51e-03 52_[+3(1.23e-06)]_33 chrII:798562-798912 1.77e-01 100 chrIII:255-490 3.75e-08 1_[+1(4.84e-08)]_4_[-3(3.49e-05)]_\ 50 chrX:233773-233873 1.32e-05 67_[-1(2.98e-09)]_3 chrXIII:298412-298837 6.68e-01 100 chrI:229458-229658 5.03e-01 100 chrXV:759197-759547 5.97e-01 100 chrX:90095-90195 7.61e-02 48_[-3(3.23e-05)]_37 chrXIII:551398-551768 2.89e-03 7_[+3(2.52e-05)]_47_[-3(2.15e-05)]_\ 1_[-3(3.74e-07)] chrXIII:554393-554743 9.53e-01 100 chrXII:366081-366401 6.27e-01 100 chrXI:162305-162723 7.50e-10 33_[-2(6.76e-13)]_37 chrIV:130082-130270 9.08e-01 100 chrXV:721-901 1.49e-01 100 chrIV:1017146-1017479 7.42e-01 100 chrXV:968070-968420 2.63e-04 71_[+3(4.17e-06)]_14 chrIV:975895-976245 9.80e-01 100 chrXVI:744133-744496 4.27e-07 50_[+2(2.53e-09)]_20 chrIV:802625-802981 1.54e-02 100 chrIV:411330-411561 1.04e-04 39_[-3(3.04e-06)]_13_[-3(4.41e-05)]_\ 18 chrX:119537-119637 6.38e-01 100 chrIV:1175656-1176040 4.04e-13 30_[-1(8.70e-09)]_2_[+2(6.20e-11)]_\ 8 chrIX:324156-324514 8.38e-06 28_[-2(9.86e-08)]_1_[+1(6.75e-05)]_\ 11 chrXI:614116-614466 2.36e-07 61_[-3(1.54e-08)]_24 chrIX:336229-336592 1.77e-02 30_[+1(6.75e-05)]_40 chrV:13290-13640 9.26e-05 17_[-3(1.09e-07)]_68 chrI:142179-142529 3.48e-01 100 chrX:517788-517888 5.81e-01 100 chrXVI:769028-769446 1.61e-07 30_[-2(9.69e-11)]_40 chrIV:946179-946542 1.06e-05 49_[+2(6.63e-09)]_21 chrXII:1052016-1052284 2.93e-09 14_[+1(3.19e-13)]_56 chrXII:1064928-1065321 1.25e-08 16_[+3(4.61e-08)]_11_[+3(3.75e-06)]_\ 3_[+3(3.75e-06)]_25 chrXIII:923466-923816 8.59e-01 100 chrXIII:480496-480851 2.14e-16 8_[-2(1.07e-12)]_2_[+1(6.52e-11)]_\ 30 chrXI:327357-327707 7.17e-01 100 chrVIII:85218-85517 1.32e-06 24_[+1(5.40e-10)]_46 chrX:607889-607989 8.54e-04 31_[-3(5.12e-07)]_3_[-3(1.38e-05)]_\ 36 chrIV:434026-434531 1.59e-08 46_[-2(9.22e-13)]_24 chrVII:601123-601473 9.60e-01 100 chrIV:1238016-1238366 7.11e-01 100 chrX:374465-374565 2.72e-01 100 chrXIV:569857-570042 5.91e-09 11_[+1(3.19e-13)]_59 chrXVI:406240-406524 3.57e-03 38_[-3(7.43e-07)]_1_[-3(3.49e-05)]_\ 31 chrV:118014-118269 4.42e-01 100 chrXVI:829598-829948 5.82e-01 100 chrVII:883688-884038 5.05e-01 100 chrXV:464261-464576 4.49e-01 100 chrXII:711032-711382 2.23e-01 100 chrIX:28-176 1.14e-04 [-3(4.61e-08)]_85 chrV:434402-434775 1.29e-04 13_[-2(6.58e-08)]_57 chrIII:295341-295612 3.16e-07 57_[-1(1.95e-11)]_13 chrXIV:546931-547345 9.24e-12 5_[-1(1.03e-08)]_32_[+2(5.53e-10)]_\ 3 chrXV:110156-110325 4.85e-01 100 chrXV:92974-93398 1.96e-01 100 chrIX:248662-248985 7.83e-01 100 chrXI:302713-303134 3.07e-01 100 chrVIII:241221-241571 8.32e-01 100 chrXII:369341-369525 4.39e-01 100 chrXII:499267-499617 9.90e-01 100 chrVII:930870-931220 6.54e-01 100 chrXV:307330-307680 8.55e-01 100 chrIX:300116-300469 2.33e-07 28_[+1(6.52e-11)]_42 chrVII:185646-185933 6.21e-07 17_[+1(6.52e-11)]_53 chrVII:879644-879994 7.11e-01 100 chrXV:79799-80085 2.94e-04 31_[+3(6.94e-05)]_7_[+3(7.87e-08)]_\ 32 chrIV:579902-580252 9.99e-01 100 chrX:204553-204653 3.34e-01 100 chrXV:407850-408200 1.28e-01 100 chrXII:374218-374516 8.85e-11 37_[-1(2.98e-09)]_2_[+2(1.49e-08)]_\ 1 chrXII:784191-784503 9.83e-08 56_[-1(8.15e-12)]_14 chrVII:544506-544814 7.86e-02 8_[+1(6.75e-05)]_62 chrVII:254100-254532 3.08e-04 61_[-3(1.23e-06)]_2_[+3(7.43e-07)]_\ 7 chrIV:1259634-1259984 7.01e-02 100 chrII:236760-237110 9.43e-01 100 chrVII:535567-535917 6.46e-01 100 chrX:58998-59098 1.44e-07 26_[+1(1.95e-11)]_44 chrXIII:296803-297211 5.68e-05 8_[-3(5.83e-08)]_77 chrXIV:241413-241687 5.94e-03 62_[-3(2.33e-05)]_23 chrXI:46698-46967 1.43e-01 4_[-1(7.64e-05)]_66 chrXIII:352112-352404 5.27e-01 100 chrXVI:404574-404924 1.97e-04 6_[-3(1.38e-07)]_79 chrXI:493839-494189 6.44e-01 100 chrVIII:36024-36374 5.76e-01 100 chrVII:788371-788731 1.03e-03 25_[+3(9.64e-07)]_60 chrVIII:115373-115723 9.27e-01 100 chrVII:148557-148907 4.97e-01 100 chrIV:341278-341598 2.21e-03 52_[+3(8.65e-07)]_33 chrXI:578833-579202 1.61e-07 52_[+2(9.69e-11)]_18 chrIV:1022729-1023079 7.43e-01 100 chrI:73423-73516 2.71e-01 93 chrXII:232249-232599 3.79e-01 100 chrVIII:549443-549793 8.45e-01 100 chrXIII:552910-553136 7.98e-01 100 chrXII:628212-628615 3.98e-05 19_[-1(2.72e-09)]_51 chrII:728310-728660 7.34e-01 100 chrII:347430-347698 9.88e-01 100 chrXVI:560058-560477 6.96e-07 42_[+1(4.85e-10)]_28 chrIV:1256941-1257249 4.41e-02 4_[+1(1.73e-05)]_66 chrVII:958726-959076 9.39e-01 100 chrIII:227788-228125 6.15e-09 35_[-1(6.01e-12)]_35 chrXII:949837-950187 6.84e-01 100 chrIV:579076-579370 3.76e-02 52_[-3(3.80e-05)]_33 chrVII:362246-362596 6.37e-03 22_[-2(4.98e-05)]_48 chrIV:58-254 6.39e-10 10_[+1(8.70e-09)]_60 chrV:307155-307505 8.61e-02 100 chrVII:228459-228809 1.63e-02 44_[-3(1.38e-05)]_41 chrVIII:358383-358771 3.21e-06 12_[+1(4.85e-10)]_58 chrV:441815-442343 5.83e-01 100 chrXIV:726093-726384 3.34e-01 100 chrVIII:17066-17416 8.44e-01 100 chrV:424784-425134 6.89e-01 100 chrI:166044-166413 4.06e-01 100 chrXII:201878-201966 8.72e-01 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chrX:156751-156851 9.38e-01 100 chrIV:1201554-1201966 2.33e-07 39_[-1(6.52e-11)]_31 chrII:88156-88507 8.36e-01 100 chrXIV:291834-292184 9.70e-01 100 chrIII:142602-142942 1.20e-04 19_[+1(8.45e-08)]_51 chrVII:399556-399906 4.59e-01 100 chrXV:160422-160772 3.40e-01 100 chrX:531653-531753 1.92e-06 23_[+2(1.20e-10)]_47 chrVIII:451919-452269 5.41e-02 100 chrVII:794256-794524 2.10e-01 100 chrIV:1237317-1237667 7.32e-01 100 chrXVI:572043-572408 6.68e-01 100 chrXV:678877-679141 3.00e-04 48_[+3(3.30e-07)]_37 chrII:235092-235442 9.99e-01 100 chrXII:243347-243697 9.34e-01 100 chrVII:440580-441000 4.49e-06 37_[+1(4.85e-10)]_33 chrXVI:795665-796015 2.67e-01 100 chrXV:1027947-1028297 9.98e-01 100 chrIV:556274-556624 3.83e-02 79_[+3(8.58e-05)]_6 chrXI:513295-513584 4.73e-02 100 chrI:71515-71865 8.51e-01 100 chrXV:1028672-1029078 2.89e-03 53_[+3(7.44e-05)]_11_[+3(1.07e-06)]_\ 6 chrXIV:576223-576532 2.45e-01 100 chrXII:837835-838046 1.96e-02 41_[+3(9.42e-06)]_44 chrXV:274525-274892 1.83e-08 14_[-1(8.15e-12)]_56 chrXIII:353421-353771 4.96e-01 100 chrVIII:74971-75394 5.34e-03 20_[-3(1.40e-06)]_65 chrXI:559081-559431 9.64e-01 100 chrXII:650999-651207 6.23e-01 100 chrX:617746-617846 2.19e-06 47_[-1(7.44e-10)]_23 chrI:81984-82231 6.71e-05 29_[-3(3.49e-05)]_6_[+3(1.09e-07)]_\ 35 chrVII:312012-312111 8.02e-01 99 chrXII:922168-922533 3.84e-04 18_[-3(5.22e-06)]_11_[-3(7.87e-08)]_\ 41 chrII:256770-257120 8.81e-01 100 chrXII:11129-11469 3.40e-09 18_[+1(8.70e-09)]_1_[-3(1.66e-07)]_\ 4_[+1(1.55e-08)]_2 chrV:397632-397982 6.23e-01 100 chrIV:1165979-1166329 7.45e-01 100 chrXIV:174330-174475 9.34e-01 100 chrVII:255184-255534 9.15e-01 100 chrVII:779427-779789 7.57e-02 57_[-1(7.88e-05)]_13 chrV:423120-423442 5.25e-03 40_[-3(1.07e-06)]_45 chrXIV:89256-89495 8.09e-02 100 chrXII:781004-781136 1.90e-02 57_[+2(4.98e-05)]_13 chrXII:674830-675180 5.55e-01 100 chrIV:117172-117529 6.30e-03 69_[-3(5.72e-06)]_16 chrXI:208704-209054 9.56e-01 100 chrVI:210576-210874 5.75e-01 100 chrXIII:500812-501162 5.19e-03 38_[-3(1.23e-06)]_47 chrXII:241636-241986 1.41e-03 45_[-3(8.65e-07)]_6_[-3(7.81e-06)]_\ 19 chrXIV:507130-507480 1.34e-01 100 chrV:101278-101628 5.81e-01 100 chrVIII:452628-452812 4.17e-01 100 chrXIV:500427-500749 1.98e-01 100 chrV:53569-53904 5.66e-04 32_[-3(3.74e-07)]_53 chrIII:168917-169267 7.91e-01 100 chrIV:492288-492638 2.08e-01 48_[+3(9.22e-05)]_37 chrX:396683-396783 9.71e-01 100 chrXV:854080-854407 5.74e-17 4_[-2(1.94e-12)]_2_[+1(9.47e-12)]_\ 34 chrX:157630-157730 9.21e-01 100 chrII:341058-341408 9.58e-01 100 chrIV:1359310-1359765 9.01e-01 100 chrI:143174-143412 4.07e-01 100 chrII:604153-604450 1.75e-03 33_[-3(2.99e-05)]_1_[-3(3.40e-06)]_\ 36 chrVII:484706-485056 7.52e-01 100 chrXVI:172923-173273 9.34e-01 100 chrVII:783809-784159 8.97e-01 100 chrXII:5509-5857 2.58e-09 31_[+1(7.33e-09)]_2_[+1(4.19e-08)]_\ 7 chrXIV:585917-586163 9.36e-01 100 chrIV:410243-410522 7.98e-10 46_[-1(2.14e-13)]_24 chrXIII:893060-893410 9.99e-01 100 chrIV:1401269-1401570 5.48e-03 48_[-3(9.22e-05)]_[-3(3.40e-06)]_22 chrXIII:289482-289832 4.60e-01 100 chrXII:673741-674240 9.61e-01 100 chrV:305732-306166 2.50e-03 85_[-3(5.85e-07)] chrXIII:145902-146258 6.97e-05 53_[-3(1.38e-07)]_15_[-3(1.65e-05)]_\ 2 chrXIV:663570-663920 2.56e-01 100 chrXI:379521-379799 3.04e-06 69_[-1(5.40e-10)]_1 chrXV:841808-842158 2.27e-01 100 chrVIII:121604-121954 9.03e-01 100 chrXII:498521-498873 1.05e-02 25_[-3(2.68e-06)]_60 chrXII:856743-857093 4.44e-01 100 chrXII:794455-794788 8.33e-01 100 chrVII:73746-74083 2.48e-06 8_[+1(5.40e-10)]_62 chrVI:95539-95781 4.40e-04 23_[+3(1.56e-06)]_62 chrXI:426852-427202 4.48e-01 100 chrXI:458386-458845 1.48e-04 64_[+2(5.84e-08)]_6 chrVI:204821-205149 1.70e-09 31_[+1(2.14e-13)]_39 chrVII:398415-398765 1.31e-01 100 chrV:551221-551513 5.08e-09 11_[+1(3.19e-13)]_59 chrIII:163466-163845 6.14e-04 39_[+3(1.23e-06)]_15_[+3(2.76e-05)]_\ 16 chrIV:1095236-1095620 1.42e-11 2_[-2(8.96e-09)]_21_[+1(2.78e-10)]_\ 17 chrIX:257401-257664 1.05e-02 22_[-3(1.80e-05)]_13_[-3(3.40e-06)]_\ 35 chrXII:522201-522412 3.94e-03 21_[-3(4.69e-06)]_10_[-3(1.23e-06)]_\ 39 chrX:414823-414923 8.03e-10 25_[+2(1.07e-12)]_45 chrIV:520794-521089 3.85e-01 100 chrIII:14490-14631 3.46e-01 100 chrXI:461440-461790 8.41e-01 100 chrIV:1163989-1164339 1.33e-01 100 chrXIII:732039-732397 6.81e-04 37_[-3(3.74e-07)]_48 chrII:165066-165416 5.59e-02 65_[-3(9.22e-05)]_20 chrVII:726459-726732 1.23e-04 41_[-3(8.65e-07)]_2_[-3(8.65e-07)]_\ 27 chrIII:162607-162957 1.82e-01 100 chrIV:1300947-1301314 1.20e-03 28_[-3(1.95e-06)]_57 chrXII:374470-374649 8.14e-01 100 chrXI:230242-230592 7.26e-01 100 chrVII:346201-346551 7.87e-01 100 chrXV:110897-111196 7.57e-02 7_[+1(7.88e-05)]_63 chrXV:43-202 5.19e-08 14_[-3(4.61e-08)]_1_[+1(1.99e-05)]_\ 40 chrXI:666509-666772 1.19e-08 29_[-1(9.46e-09)]_9_[-1(1.32e-08)]_\ 2 chrVI:64973-65321 4.08e-05 67_[+3(7.87e-08)]_18 chrXII:805583-805720 3.40e-03 21_[-3(2.68e-06)]_64 chrII:226899-227273 1.05e-07 38_[-1(6.01e-12)]_32 chrIV:1013774-1013918 3.44e-02 100 chrXI:74456-74810 1.72e-06 40_[-1(1.85e-09)]_30 chrVII:27-125 1.11e-02 98 chrIX:174864-175274 2.50e-16 11_[-1(1.95e-11)]_2_[+2(9.22e-13)]_\ 27 chrXIII:271169-271519 8.32e-01 100 chrIV:1489312-1489560 6.13e-01 100 chrIV:332242-332592 7.06e-01 100 chrVII:533802-534152 4.91e-01 100 chrXVI:775662-775988 6.75e-06 [-2(8.96e-09)]_70 chrXIII:626420-626770 9.21e-01 100 chrXIII:321030-321343 6.96e-16 21_[-2(2.27e-10)]_2_[+1(2.14e-13)]_\ 17 chrXII:962926-963256 2.01e-02 100 chrVII:738932-739261 6.90e-01 100 chrVII:412175-412543 1.32e-06 28_[+1(5.40e-10)]_42 chrXII:713149-713540 4.62e-03 75_[+3(8.65e-07)]_10 chrXI:313337-313654 2.19e-02 50_[-3(5.22e-06)]_35 chrXIV:6592-6818 3.21e-05 9_[-3(1.66e-07)]_76 chrVIII:386638-386793 6.41e-01 100 chrIII:82377-82703 8.14e-01 100 chrVII:561446-561913 2.01e-01 100 chrXII:605172-605587 1.17e-01 100 chrIV:884195-884494 2.79e-06 66_[-1(6.16e-09)]_4 chrVII:498067-498417 2.09e-01 100 chrIII:11253-11603 4.29e-01 100 chrXII:953019-953369 8.64e-01 100 chrXVI:622424-622795 4.29e-06 42_[+1(4.85e-10)]_28 chrVII:730971-731348 1.40e-11 27_[-1(1.85e-09)]_3_[+2(2.53e-09)]_\ 10 chrII:301252-301602 3.16e-02 100 chrXI:140863-141269 1.55e-06 12_[-2(2.51e-10)]_58 chrXIII:124371-124694 1.30e-02 12_[-3(3.75e-06)]_1_[+3(3.40e-06)]_\ 57 chrVII:401422-401766 7.85e-01 100 chrXIV:560565-560942 2.50e-16 [-2(9.22e-13)]_2_[+1(1.95e-11)]_38 chrXIV:499391-499585 7.88e-01 100 chrXII:930840-931190 7.79e-01 100 chrX:424416-424516 9.86e-01 100 chrIV:1450902-1451197 5.85e-04 10_[+3(2.76e-05)]_56_[+3(2.20e-06)]_\ 4 chrXII:199378-199540 4.05e-01 100 chrXVI:210139-210465 7.68e-01 100 chrXII:951025-951123 6.92e-01 98 chrXII:1064252-1064602 9.83e-01 100 chrIII:177368-177464 1.48e-01 96 chrXIII:183781-184109 5.62e-11 13_[-2(1.20e-10)]_[+1(8.45e-08)]_27 chrXVI:810439-810856 2.35e-01 100 chrXV:966271-966621 1.55e-01 100 chrIV:619920-620182 1.86e-05 10_[+1(2.98e-09)]_60 chrV:143821-144171 9.16e-01 100 chrVI:226568-226853 2.14e-16 38_[-2(1.07e-12)]_2_[+1(6.52e-11)] chrV:363656-364006 9.78e-01 100 chrIV:321704-321930 1.92e-02 31_[-3(3.40e-06)]_11_[-3(1.25e-05)]_\ 28 chrXVI:692561-692911 3.64e-01 100 chrV:303127-303477 6.98e-01 100 chrX:541303-541403 3.79e-01 100 chrVII:311295-311485 8.32e-01 100 chrVIII:562333-562609 3.25e-09 42_[+3(4.61e-08)]_2_[-1(8.70e-09)]_\ 11 chrVIII:296945-297181 3.43e-03 19_[+3(7.96e-05)]_9_[-3(1.05e-05)]_\ 42 chrXI:183573-183923 9.77e-01 100 chrXVI:282369-282719 7.23e-01 100 chrXV:867658-868008 9.73e-01 100 chrX:378195-378295 6.27e-01 100 chrVIII:504285-504635 8.83e-01 100 chrXVI:701850-702200 9.42e-01 100 chrXIV:302446-302796 7.13e-01 100 chrXV:340161-340569 5.73e-06 26_[+1(2.98e-09)]_44 chrXI:101047-101397 5.67e-01 100 chrXV:891411-891761 3.50e-01 100 chrXVI:304024-304374 8.41e-01 100 chrXIII:549902-550252 8.71e-01 100 chrIII:148064-148414 8.27e-01 100 chrII:59463-59813 2.45e-01 100 chrXVI:699985-700322 6.18e-04 30_[-3(4.41e-05)]_20_[-3(1.25e-05)]_\ 20 chrXVI:731962-732313 4.41e-03 16_[-3(1.40e-06)]_69 chrV:487210-487554 1.55e-06 9_[-2(2.51e-10)]_61 chrXI:106480-106830 2.28e-01 100 chrXV:866593-866900 4.76e-03 41_[-3(1.15e-05)]_1_[+3(4.69e-06)]_\ 28 chrXVI:586583-586933 8.91e-01 100 chrIV:568693-569003 9.45e-01 100 chrX:228122-228222 4.19e-01 100 chrXII:672579-672929 6.01e-01 100 chrV:322002-322352 1.81e-01 100 chrVIII:556715-557165 1.95e-08 2_[-1(1.12e-08)]_12_[+3(9.64e-07)]_\ 1_[+3(3.75e-06)]_25 chrVI:180742-181175 6.44e-01 100 chrIX:231936-232286 4.62e-01 100 chrXV:438466-438883 3.04e-06 18_[-1(1.68e-09)]_52 chrIII:162407-162757 1.88e-01 100 chrXI:618809-619195 2.70e-03 30_[-3(5.96e-05)]_11_[+3(7.07e-06)]_\ 29 chrXVI:280846-281050 9.07e-01 100 chrXII:1002278-1002628 2.24e-01 100 chrII:256568-256918 6.04e-01 100 chrIX:68214-68488 1.14e-03 48_[-3(1.89e-07)]_37 chrV:207155-207560 2.60e-01 100 chrXIV:442855-443286 1.48e-04 58_[+2(5.84e-08)]_12 chrXV:94487-94827 2.97e-03 27_[-3(5.12e-07)]_20_[-3(5.72e-06)]_\ 23 chrVIII:466792-467177 1.71e-01 100 chrVII:346002-346352 1.29e-02 100 chrV:250139-250510 2.34e-08 3_[-1(7.88e-05)]_9_[+2(5.02e-10)]_\ 28 chrXII:167820-168189 9.00e-09 41_[+1(6.01e-12)]_29 chrVIII:103931-104264 6.32e-02 9_[-3(7.44e-05)]_76 chrVII:147831-148181 9.03e-01 100 chrIV:323052-323245 6.64e-01 100 chrVII:661568-661879 1.65e-01 100 chrXII:262798-263126 6.20e-03 32_[-3(2.76e-05)]_5_[-3(8.65e-07)]_\ 33 chrI:32-165 1.01e-03 3_[-3(3.40e-06)]_82 chrV:420635-420985 1.75e-02 100 chrXV:623297-623647 1.02e-01 100 chrX:115776-115876 1.55e-06 24_[-2(2.51e-10)]_46 chrXVI:856733-857050 9.63e-10 60_[-1(2.14e-13)]_10 chrV:141681-142031 1.68e-01 100 chrIV:980880-981249 1.11e-07 11_[+1(6.01e-12)]_59 chrVII:555339-555658 4.32e-04 61_[-3(7.43e-07)]_24 chrV:438524-438885 1.32e-06 45_[-1(5.40e-10)]_25 chrXV:551979-552329 7.83e-01 100 chrXIII:122995-123345 5.70e-01 100 chrV:529360-529710 4.84e-01 100 chrXV:487261-487605 2.50e-06 55_[-1(1.85e-09)]_15 chrIV:1352367-1352715 1.07e-06 17_[+1(6.52e-11)]_53 chrVII:736176-736560 7.50e-10 52_[+2(6.76e-13)]_18 chrXV:505116-505458 3.32e-04 56_[-3(3.40e-06)]_10_[-3(7.07e-06)]_\ 4 chrXII:781482-781813 2.58e-03 38_[+3(6.43e-05)]_3_[+3(1.23e-06)]_\ 29 chrXVI:794517-794735 4.80e-04 60_[-3(1.07e-06)]_3_[-3(1.66e-07)]_\ 7 chrX:436073-436173 4.00e-01 100 chrVIII:127323-127673 7.10e-01 100 chrXV:911386-911736 1.85e-01 22_[+3(9.86e-05)]_63 chrV:396799-397149 6.40e-03 32_[-1(3.54e-05)]_38 chrII:236967-237317 3.94e-01 100 chrXIII:504713-505184 1.48e-04 69_[+2(5.84e-08)]_1 chrV:322284-322634 8.63e-01 100 chrII:395012-395362 9.85e-01 100 chrXVI:453925-454275 7.30e-01 100 chrIV:525178-525296 1.55e-04 13_[+3(9.13e-08)]_72 chrXV:900828-901178 9.72e-01 100 chrXIII:924193-924405 7.00e-08 51_[+3(3.40e-06)]_3_[-1(1.12e-08)]_\ 1 chrVI:162049-162364 1.99e-01 100 chrV:135255-135696 2.14e-16 10_[-2(1.07e-12)]_2_[+1(6.52e-11)]_\ 28 chrIV:359408-359821 1.84e-13 12_[-1(1.68e-09)]_25_[+2(9.69e-11)]_\ 3 chrXI:109680-110030 4.17e-02 80_[+3(4.77e-05)]_5 chrVI:191358-191790 2.18e-08 59_[+1(8.15e-12)]_11 chrXV:832550-832650 8.98e-01 100 chrX:703318-703418 3.70e-03 34_[+3(6.54e-07)]_51 chrXV:33563-33913 4.37e-01 100 chrIV:231927-232277 5.81e-01 100 chrVII:12410-12760 4.86e-02 50_[-2(7.08e-05)]_20 chrXVI:686678-687028 4.27e-01 100 chrXI:219731-220031 2.44e-09 63_[-1(2.14e-13)]_7 chrXIII:463363-463652 7.53e-01 100 chrXII:731904-732252 5.22e-06 61_[-1(7.44e-10)]_9 chrXV:966062-966412 1.21e-01 100 chrIII:178372-178663 1.47e-02 2_[+3(3.40e-06)]_5_[-3(2.99e-05)]_\ 63 chrIII:315622-315972 1.25e-03 8_[+2(2.86e-05)]_62 chrVIII:411211-411415 3.62e-01 100 chrM:60603-60953 4.93e-01 100 chrII:645020-645309 7.55e-01 100 chrX:73395-73495 3.60e-02 38_[-3(9.42e-06)]_47 chrXV:741826-742176 6.00e-01 100 chrXIV:631796-632067 9.23e-06 6_[+1(1.34e-07)]_64 chrXIII:297793-298344 1.03e-01 100 chrV:266193-266543 6.95e-01 100 chrXV:780549-780793 1.05e-01 83_[+3(5.96e-05)]_2 chrII:376291-376641 8.28e-01 100 chrXII:30-213 9.69e-01 100 chrIX:325567-325957 2.50e-16 35_[-1(1.95e-11)]_2_[+2(9.22e-13)]_\ 3 chrIX:183375-183677 8.50e-09 7_[+1(3.19e-13)]_63 chrXII:214841-215119 2.41e-01 100 chrXII:899120-899470 3.36e-01 100 chrVI:221785-222043 3.23e-03 53_[+3(8.65e-07)]_32 chrII:197316-197851 9.94e-01 100 chrX:74713-74802 3.58e-01 89 chrVII:479879-480067 2.49e-01 100 chrXIII:733332-733429 3.98e-03 62_[+3(8.54e-06)]_20 chrI:182410-182765 1.05e-07 36_[+1(6.01e-12)]_34 chrXVI:745420-745770 4.06e-01 100 chrV:288407-288691 1.37e-01 100 chrVII:828534-828965 7.50e-10 34_[-2(6.76e-13)]_36 chrXI:308090-308352 2.17e-06 16_[+1(5.40e-10)]_54 chrIV:340267-340617 9.44e-01 100 chrVIII:237729-238110 5.95e-06 40_[+1(4.85e-10)]_30 chrXIV:281955-282305 9.77e-01 100 chrIII:123510-123812 6.79e-05 7_[+1(1.34e-07)]_63 chrXV:624298-624389 8.35e-01 91 chrIX:316131-316560 6.91e-03 56_[-3(4.17e-06)]_29 chrVIII:382967-383348 2.44e-03 8_[+3(3.04e-06)]_77 chrIII:162905-163255 7.07e-01 100 chrVIII:148962-149260 1.62e-04 18_[+3(1.95e-06)]_67 chrVIII:125953-126285 2.66e-03 32_[-3(3.74e-07)]_53 chrXII:282524-282840 3.69e-03 24_[-3(5.12e-07)]_2_[-3(8.54e-06)]_\ 44 chrIV:229535-229764 1.10e-04 30_[-3(1.95e-06)]_9_[-3(2.28e-07)]_\ 31 chrII:341276-341626 9.00e-01 100 chrXIV:783914-784138 4.62e-08 57_[-1(4.84e-08)]_13 chrXIII:24539-24889 1.83e-01 100 chrXIII:761937-762172 8.22e-01 100 chrXII:932102-932508 1.16e-03 1_[+3(1.38e-07)]_1_[+3(1.38e-07)]_\ 10_[+3(8.65e-07)]_43 chrVII:310484-310827 3.61e-03 80_[-3(4.17e-06)]_5 chrXV:670298-670648 6.16e-01 100 chrV:308375-308725 4.77e-01 100 chrV:61227-61421 5.99e-01 100 chrVI:164733-165083 3.20e-01 100 chrX:121908-121998 9.95e-01 90 chrV:138501-138880 9.94e-11 56_[+2(6.76e-13)]_14 chrV:145625-145975 3.20e-02 100 chrXII:975936-976205 1.05e-05 6_[+1(1.85e-09)]_64 chrIX:210504-210860 4.50e-18 32_[-1(3.19e-13)]_3_[+2(1.07e-12)]_\ 5 chrXIII:650865-651120 3.41e-05 38_[-3(1.54e-08)]_47 chrIX:136333-136683 7.07e-01 100 chrVII:324162-324512 5.91e-01 100 chrXII:92357-92684 9.37e-03 69_[-1(1.79e-05)]_1 chrXVI:581905-582220 6.84e-07 49_[-1(6.52e-11)]_21 chrIII:138308-138658 2.68e-01 100 chrXI:665641-665991 5.14e-01 100 chrXVI:795049-795399 9.25e-01 100 chrIV:1075354-1075650 3.68e-06 30_[-2(6.63e-09)]_40 chrII:350650-350962 2.12e-01 100 chrX:383409-383509 8.28e-01 100 chrV:86476-86728 1.03e-07 51_[-1(6.01e-12)]_19 chrXIV:602211-602395 1.37e-09 58_[-1(3.19e-13)]_12 chrXIII:420528-420824 2.24e-06 5_[+1(5.40e-10)]_65 chrVII:278359-278709 6.37e-01 100 chrII:45019-45314 2.19e-03 53_[-3(4.32e-07)]_1_[+3(7.07e-06)]_\ 16 chrIX:231192-231542 8.50e-01 100 chrX:523880-523980 9.00e-09 58_[+1(6.01e-12)]_12 chrXII:48680-49071 1.80e-02 75_[+3(3.04e-06)]_10 chrV:140459-140832 3.86e-03 77_[+3(1.23e-06)]_8 chrXVI:56077-56462 2.27e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************