Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.053859 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.077206 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.095903 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.033815 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.07035 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background Finished invoke: name: bg status: 0 time: 0.022528 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 832.493634 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/seqs-shuffled Finished invoke: name: dreme status: 0 time: 92.452746 Invoking: centrimo -seqlen 476 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.301423 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.446848 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary DNSSCTYWACCVACTGGGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.508789 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary TCGAACCSVKGAYCTYMNGRTTAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.559917 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary ACCCABAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.255073 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary AARAARA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.457917 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary GCCWTAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.291956 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.25011 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary ATCCGKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.246993 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary CKATCAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.232738 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary CGTTGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.259224 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary ARCAGAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.298331 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary CKTTGGGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.257767 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary ATACAACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.19969 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary AGACCAM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.256607 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background -primary CTMATAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.233722 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif DNSSCTYWACCVACTGGGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo1 status: 0 time: 0.299316 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif TCGAACCSVKGAYCTYMNGRTTAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo2 status: 0 time: 0.296145 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif ACCCABAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo3 status: 0 time: 0.230287 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif AARAARA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo4 status: 0 time: 0.163088 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif GCCWTAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo5 status: 0 time: 0.218582 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo6 status: 0 time: 0.194998 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif ATCCGKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo7 status: 0 time: 0.200309 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif CKATCAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo8 status: 0 time: 0.214676 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif CGTTGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo9 status: 0 time: 0.199457 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif ARCAGAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo10 status: 0 time: 0.191511 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif CKTTGGGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo11 status: 0 time: 0.195774 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif ATACAACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo12 status: 0 time: 0.185955 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif AGACCAM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo13 status: 0 time: 0.223792 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/background --motif CTMATAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/BY4741--GAL11.fa Finished invoke: name: fimo14 status: 0 time: 0.410752 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--GAL11/summary.tsv Finished invoke: name: summary status: 0 time: 0.209613 Done