]> meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/background -dna -revcomp -nostatus ganapati.stanford.edu zoops 3 inf E-value of product of p-values 0 6 30 11 1 yes yes 2 594 0.8 uni 0.5 dirichlet 0.01 50 1e-05 594 59315 0 -1 -1 both Stopped because requested number of motifs (3) found. 0.322 0.178 0.178 0.322 -1348 -1348 -1348 163 -103 -1348 225 -1348 -1348 -1348 249 -1348 -1348 200 -1348 -16 -1348 175 -2 -50 -103 95 25 -16 162 -1348 -1348 -520 -129 -1348 229 -1348 -520 -134 -1348 151 -361 -9 136 12 -520 -1348 248 -1348 -1348 -434 164 44 -68 -53 -134 91 80 -334 -1348 39 91 -175 75 -288 75 -25 30 -188 -261 -434 214 -103 -520 159 115 -239 -1348 142 142 -261 12 61 -17 -56 -44 109 -88 -16 0.000000 0.000000 0.000000 1.000000 0.157895 0.000000 0.842105 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.710526 0.000000 0.289474 0.000000 0.596491 0.175439 0.228070 0.157895 0.342105 0.210526 0.289474 0.991228 0.000000 0.000000 0.008772 0.131579 0.000000 0.868421 0.000000 0.008772 0.070175 0.000000 0.921053 0.026316 0.166667 0.456140 0.350877 0.008772 0.000000 0.991228 0.000000 0.000000 0.008772 0.552632 0.438596 0.201754 0.122807 0.070175 0.605263 0.561404 0.017544 0.000000 0.421053 0.605263 0.052632 0.298246 0.043860 0.543860 0.149123 0.219298 0.087719 0.052632 0.008772 0.780702 0.157895 0.008772 0.535088 0.394737 0.061404 0.000000 0.473684 0.473684 0.052632 0.350877 0.271930 0.157895 0.219298 0.236842 0.377193 0.096491 0.289474 TGG[CT][CT][CTG]AGT[GT]G[GT][TA][AT][AG][AG]G[CG][CG][ACT][CTA] AATGGTCTCT CGTGCTAATA AGTGGTCTCT CGTGCTAATA ATTGGTCTCT CGTGCTAATA AATGGTCTCT CGTGCTAATA ACAGGTCTCT CGTGCTAATA TTTGGTCTCT CGTGCTAATA CCTGGTCTCT CGTGCTAATA GGTCTCT CGTGCTAATA AATGGTCTCT CGTGCTAATA TAAGCTTCTA ACACTAGTAA AGAGCTTCTA ACACTAGTAA CGAGCTTCTA ACACTAGTAA ACTGCTTCTA ACACTAGTAA AAGCTTCTA ACACTAGTAA GAAGCTTCTA ACACTAGTAA CGGGCTTCTA ACACTAGTAA TCAGTCCCAG GCCTGCTATT TCTGTCCCAG GCCCTGCTAT ACCGTCCCAG GCCTGCTATT TTGGCAACT AGATTAGAAA TATGGCAACT AGATTAGAAA TAAGGCAACT AG TATGGCAACT AGATTAGAAA TATGGCAACT AGATTAGAAA TAAGGCAACT AGATTAGAAA CGAGGCAACT AGATTAGAAA AATGGGAGTT CAGATTTAGG AATGGGAGTT CAGATTTAGG AATGGGAGTT CAGATTTAGG AATGGCACTA AGACTCGAAT TCAGGGCACA TCCCTTGCAA GTTGGGCACA TCCCTTGCAA TTAGGGCACA TCCCTTGCAA TGCGGGCACA TCCCTTGCAA TCTGGGCACA TCCCTTGCAA TAAGACTCCA GCGACTGTTA AATGACTCCA GCGACTGTTA TGCGACTCCA GCGACTGTTA AAAGACTCCA GCGACTGTTA TTTGGAGGGT CAGACTTAAG ATTGGGCGTG CCCTTAGCAT GATGGAGGGT CGTGGAGGGT CAGACTTAAG TTCGGGCGTG CCCTTAGCAT ATAGGGCGTG CCCTTAGCAT ATTGGGCGTG CCCTTAGCAT TACGGAGGGT CAGACTT AGTGGTTGTT CTGATTCAAG AGTGGTTGTT CTGATTCAAG AGTGGTTGTT CTGATTCAAG AGTGGTTGTT CTGATTCAAG AGTGGTTGTT CTGATTCAAG TAAGCGGATT AGACTGAAGA GAAGCGGATT AGACTGAAGA TGAGCGGATT AGACTGAAGA TAAGCGGATT AGACTGAAGA TATGCGGATT AGACTGAAGA TATGCGGATT AGACTGAAGA TCATCCTTGT CGGCTTTTAA TTAGGTTTCG CTGCTTAACA ATAGGTTTCG CTGCTTAA ATAGGTTTCG CTGCTTAACA ACAGGTTTCG CTGCTTAACA TTTGGTTTCG CTGCTTAACA AGTGGTTTCG CTGCTTAACA CCTGGTTTCG CTGCTTAACA AGTGGTTTCG CTGCTTAACA ATAGCCTTGT TGACTCTTAA AGAGCCTTGT TGACTCTTAA AAAGCCTTGT TGACTCTTAA ATAGCCTTGT AGAGCCTTGT TGACTCTTAA GTAGCCTTGT TGACTCTTAA TTAGCCTTGT TGACTCTTAA TTGTTCCTCG TGGCTACGAA TTGTTCCTCG TGGCTACGAA TTGTTCCTCG TGG CTATTCCTCG TGGCTACGAA AATGCTCGTG GTGCTTATAG AAAGCTTCAG AGTCTCATAA AGTGCTTCAG AGTCTCATAA TATGCTTCAG AGTCTCATAA AGCGCAAG CGTTGCCATC TTAGCGCAAG CGTTGCCATC TGAGCGCAAG CAAGCGCAAG CGTTGCCATC CAAGCGCAAG CGTTGCC CAAGCGCAAG CGTTGCCATC TAAGCGCAAG TTCGCGCAAG CGTTGCCATC AGCGCGCAAG CGTTGCCATC CTAGCGCAAG CGTTGC ATCGCGCAAG CGTTGCCATC ATCGGGCGTG GCTTTGGGCG TAAGGGCGTG GCTTTGGGCG CATGGGCGTG GCTTTGGGCG ATCGGGCGTG GCTTTGGGCG TTCGGGCGTG GCTTTGGGCG CAAGGGCGTG GCTTTGGGCG CAAGGGCGTG GCTTTGGGCG CCGGGTCCAA CGCCTTTACA CGACTCTCGG CAAGACTGTA ATACTCTCGG CAAGACTGTA TCACTCTCGG CAAGACTGTA TCACTCTCGG CAAGACTGTA TGACTCTCGG CAAGACTGTA GGGAGTGGTA CGAGTGGAGA GTGGTAAAGC TCAATCT ACTAATGG GTCACCGTGC CGATCAACTG GACCGAGTAG GGAAAGGTAC TACGGGTGTG GAAGGAGAAC TAATGGACTT TTGGTTCCGT CCCTCCTAA TATAGTGTAC ATGGTGTATG -292 94 164 -234 -46 -306 203 -392 -1220 -1220 249 -1220 60 -1220 152 -1220 25 -25 64 -75 -1220 -1220 -1220 163 -1220 222 -1220 -92 -1220 -1220 249 -1220 163 -1220 -1220 -1220 163 -1220 -1220 -1220 -1220 249 -1220 -1220 -392 215 -306 -92 -192 164 85 -292 -11 103 64 -234 -392 -74 119 54 -34 -1220 207 -1220 112 -1220 -148 -46 -1220 146 -1220 66 -292 207 -306 -75 -392 103 -306 89 -111 119 -306 40 -22 158 -306 -92 -46 94 -6 -34 -1220 85 194 -1220 66 -106 111 -392 -392 -106 -206 140 -234 -106 26 99 108 -206 -6 -160 0.042553 0.340426 0.553191 0.063830 0.234043 0.021277 0.723404 0.021277 0.000000 0.000000 1.000000 0.000000 0.489362 0.000000 0.510638 0.000000 0.382979 0.148936 0.276596 0.191489 0.000000 0.000000 0.000000 1.000000 0.000000 0.829787 0.000000 0.170213 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.021277 0.787234 0.021277 0.170213 0.085106 0.553191 0.319149 0.042553 0.297872 0.361702 0.276596 0.063830 0.021277 0.106383 0.404255 0.468085 0.255319 0.000000 0.744681 0.000000 0.702128 0.000000 0.063830 0.234043 0.000000 0.489362 0.000000 0.510638 0.042553 0.744681 0.021277 0.191489 0.021277 0.361702 0.021277 0.595745 0.148936 0.404255 0.021277 0.425532 0.276596 0.531915 0.021277 0.170213 0.234043 0.340426 0.170213 0.255319 0.000000 0.319149 0.680851 0.000000 0.510638 0.085106 0.382979 0.021277 0.021277 0.085106 0.042553 0.851064 0.063830 0.085106 0.212766 0.638298 0.680851 0.042553 0.170213 0.106383 [GC][GA]G[GA][AG]TCGAACC[CG][CAG][TG][GA][AT][TC]C[TC][TC][CA][CTA][GC][AG]T[TG]A TCTAG TTAGCACGGT TGGTCTCTAG TTAGCACGGT G TTAGCACGGT TTAGCACGGT TGGTCTCTAG TTAGCACGGT GAAGTCAGAC CACTCACGAT GAAGTCAGAC CGAT GAAGTCAGAC GAAGTCAGAC CACTCACGAT GAAGTCAGAC CACTCACGAT GAAGTCAGAC CTCCGAAGCG GAACGTGATG CTCCGATACG AAGCGTGATG CTCCGATACG AAGCGTGATG CTCCGATACG AAGCGTGATG CTCCGATACG AAGCGTGATG AGCCCTGTAG AGAGTCATAC AGCCCTGTAG AGAGTCATAC AGCCCTGTAG AGAGTCATAC TGCGCAAGCC CAACGTTGGA TGCGCAAGCC CAACGTTGGA GCAAGCC CAACGTTGGA TGCTTCCAAT CTAGTGTGGC TGCTTCCAAT CTAGTGTGGC TGCTTCCAAT CTAGTGTGGC TGCTTCCAAT CTAGTGTGGC TGGACGCAAC CAAGGGAAGC TGCTCCAGGG TGAGACTGAC G TGAGACTGAC AGGG TGAGACTGAC CTCCTCATAG CCTTGCTTAA CTCCTCATAG CCTTGCTTAA TGAGCGGTAC AAGGGTGGGA TGATCCAACC TAAAGGCGAC TGTTCCAACC TGAAGGCAAC GT ACAGTCGCAC CACC GAACCGAAAG CTCCCGGGG CGTAGTGATA C CTAAGGGAGC TGCGAACTCT CTTGACCAAA CTTCCCCGCC GTAGCCAGAC GCC GTAGCCAGAC GCTCGCACT GCAATCTGCT CTCCGCGACG CAAGCGCCCA GCCATCTCC CAACGATGTG GCCATCTCC CAACGATGTG ATCTCC CAACGATGTG 36 -113 70 -58 20 -1344 131 -77 105 -1344 74 -316 -1344 -1344 -30 141 -516 -1344 248 -1344 -357 16 -1344 126 109 -230 56 -416 -357 119 -1344 82 -184 -1344 234 -516 -1344 -1344 249 -1344 30 -1344 176 -1344 -1344 -430 -172 154 -1344 -430 234 -184 -284 28 -149 107 42 -230 22 1 0.414414 0.081081 0.288288 0.216216 0.369369 0.000000 0.441441 0.189189 0.666667 0.000000 0.297297 0.036036 0.000000 0.000000 0.144144 0.855856 0.009009 0.000000 0.990991 0.000000 0.027027 0.198198 0.000000 0.774775 0.684685 0.036036 0.261261 0.018018 0.027027 0.405405 0.000000 0.567568 0.090090 0.000000 0.900901 0.009009 0.000000 0.000000 1.000000 0.000000 0.396396 0.000000 0.603604 0.000000 0.000000 0.009009 0.054054 0.936937 0.000000 0.009009 0.900901 0.090090 0.045045 0.216216 0.063063 0.675676 0.432432 0.036036 0.207207 0.324324 [AGT][GA][AG]TGT[AG][TC]GG[GA]TG[TC][ATG] AAAAAGTTCT CGGGTAATGC TTAGGGTTGT GTGTGGGTGT GTGTGGGTGT GTGTGGGTGT GTGTGGGTGT GTGTGTGTGG GTGTGGGTGT GTGTGTGGGT ACAGATGTAC CGGATGTATA ATTTTCA TCGGATGTTC AAAATACTAT ATTTTAACCG GTGGGCTTGT CAGTCCCGAT AAGA TGGTGTGTGT ATAAAAAATA ATGCACGGAT TGTGTGTGGG G TGTGTGTGTG GTGGGTGTGG AGTGTGGGTG GGTGTGTGTG CATGAG GAGATAATTG AATAAATAGT TCCACGCGTC TGGAGTTCAA AGAAAAGAGG CACTTATTTA TACATGGAGT GTAAAGATGT TTAACGTCTT CTGGATGACA AAAAAGGAAA GCGGCAATTA GAAGCTCGCC ATGAGAACTC TTCTCTGAAT CTGGGTGTAT ACATGAATGT AATTTCAAAA AAATTCAGTA AGCCGCGGTT GTAATTTAAC AAATTAACAT TTATTAAATG ATAATCCTTC TTGTGTAAGA GGGTTCACAA TACAACAGGG GGAGCCAACT GTAATGTGTT ATGTATGGGT GTAAGCACAG GTATGGTGTA CAAAAATGCT GTGTGGTGTG GTGTGGTGTG GTGTGGGTGT TGTGGGTGTG CAAACACCTT AAAGGGATGT ACGCTATTCT TTTTATGTTT CAACCATCCT CTGACGATGC TAAACAAATC CAATGGTAAA TTTACATTTT AAAAGGGAAA CACACATGCG TTATGTCTTG GAAAGCTATA TGTATATGTC TGGGTCCACA TGGTCCCAAA TTTTTTATAC ATAGTCTGCA TGTCTGGGTG TAATTGTCTC CCGAAGACAA AATTCTATTT ACATCTTTCA ACCTCAAATA GGGTTAAAAA GGGTTGGCAT ACAATAATCA GGAAAGGTAT GTGCG TAATGTCTTT GTGATGGTGA AAACTGTCAG CGGCATTGTA TTGTGCGTCC TATTTAAAAA TATAGGGTAT TGGGTTACAC TATATAAAAT GGGTTTATGA TTTTCTCTAG TGGGTTTAGA GTAAGGAATA TTATTATCCA AAAGATAGAA GAGAATTGGA AATTTCAAAC TGTGATGGGT TGGGT TTGGAGGTGG AAACTTCATA TTTCAAATAG TAGAGGAATT GAATACATCG TGATATCACT TGGGTGTAGA AATATGCAGC TTTGGGTGCC TGATTTGTTT TGGGTGTTAA AAAAGTCTTA CGCTCGCAG GGGCGTGTGC CTGGGTTGAG CGGATGTTCC ATTCCTTACA AACAGGAAAG CCTTGTCAGA GTGTACACCA AAAGGGTAAT AAATGATTGG CGAACACCAA AAACAAAGAG TGTGCGGTTG CGCGCCGTTG AATATGTACT TAACGTTCCA AAGGTCTTTT AAATAAAGAT AAGGTATGAA TTATTCAACC ACCAAAAACT TTATAGAATA AAGCAGGGCC CAAACATCCA TGAAGGAAAA TGGGTTTTTT GTAGAATTCT ATAGGAATCC GTTGCCAGAA CGTATGTTAT TTTTTTTTTT TTGGGTTTAG GCAAGGAAAT CAATTACACG CAGCATATGT TATAATCCAA AATGTATGGG TAAAATACAA AATGTCTAAA AGCATTCTGG ACACCGGTTT CGAATATGAA TAAATGTACG CCATACATTT ATTTTGTCTT AGTA TATTAAGTCC AATTTTTAAA TATAGTGTAC TGTGGGTCCC ACATTGGTTA TACATTTTAA ATAGCAGTCT TATGGGTTCT TAAAATGTCC CCATAGTAAC AAAAGTCACG ATACCATATC ATAAGGTTCA GTTTGTAAAA AGTCTGAAAA CAAAAGCGTG CGCTGCTCGA TTGCCTGCAT ACAGGAAATG GAATAATTAT GTTGTATAAA CTTTTCAGTG CAATGATGTG TTTCATGAAT ACATGGTGTA GTATGGGTGA AATTGAAAAG ATGGGTGTAG AGATTAATAC TTATAACGCA ATACGTACAG TTTGAAGCTA CACTTGTGGG TTTATTTCCA AATAAATGAA TCGCTTAAAT CAGGATAACA GTATACACAA ACGACACCGC CTGGTGAAAA AAAACACTGT TATTGAAATA AATTTCTTGG TTTCCTCCGG ACACTCAGGC TTTATACGCG AAAAGTTTTG AAACACATTA GTTCATG