xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation= xmlns:fimo="http://noble.gs.washington.edu/schema/fimo" > /software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/background --motif KAGACCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/BY4741--CUP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/fimo_out_11 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/BY4741--CUP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--CUP2/background true true true false true 0.0001 p-value 100000 0.1 1 KAGACCA 0.322 0.178 0.178 0.322 cisml.xml