Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.011194 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055059 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.067158 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.010988 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background Finished invoke: name: bg status: 0 time: 0.009538 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 649.320814 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 72.201406 Invoking: centrimo -seqlen 384 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.171999 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.439032 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary SSCTYWAMCMACTVGRCCAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.58345 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary GRATCGAACCSVKGAYCTYMH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.469162 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary TGTAYGGR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.279089 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary RAAAAAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.366272 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.329228 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary AASGCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.32257 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary CGCGCTHC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.253648 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary AGAYCGGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.2478 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary CCATCGTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.234022 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.251336 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary CTCTMCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.234602 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary ACRGATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.231621 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary CCAARAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.238402 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary TAATCAKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.248993 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary AYTGCGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.24908 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary CTWGACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.26177 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary CACGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.258595 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary GGAWTTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.23923 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_19 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary TGTTGWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo19 status: 0 time: 0.28907 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/spamo_out_20 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background -primary AGACTGWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml Finished invoke: name: spamo20 status: 0 time: 0.219377 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif SSCTYWAMCMACTVGRCCAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo1 status: 0 time: 0.182246 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif GRATCGAACCSVKGAYCTYMH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo2 status: 0 time: 0.182873 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif TGTAYGGR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo3 status: 0 time: 0.096685 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif RAAAAAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo4 status: 0 time: 0.079042 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo5 status: 0 time: 0.078484 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif AASGCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo6 status: 0 time: 0.079115 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif CGCGCTHC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo7 status: 0 time: 0.095207 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif AGAYCGGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo8 status: 0 time: 0.095297 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif CCATCGTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo9 status: 0 time: 0.094586 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo10 status: 0 time: 0.093882 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif CTCTMCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo11 status: 0 time: 0.09538 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif ACRGATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo12 status: 0 time: 0.094322 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif CCAARAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo13 status: 0 time: 0.096466 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif TAATCAKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo14 status: 0 time: 0.094645 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif AYTGCGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo15 status: 0 time: 0.093413 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif CTWGACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo16 status: 0 time: 0.094481 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif CACGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo17 status: 0 time: 0.092923 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif GGAWTTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo18 status: 0 time: 0.095051 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_19 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif TGTTGWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo19 status: 0 time: 0.078334 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/fimo_out_20 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/background --motif AGACTGWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/AWRI1631--ZAP1.fa Finished invoke: name: fimo20 status: 0 time: 0.093907 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--ZAP1/summary.tsv Finished invoke: name: summary status: 0 time: 0.170264 Done