Invoking:
  getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.01496
Invoking:
  fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.064547
Invoking:
  fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.083031
Invoking:
  fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.024584
Invoking:
  fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-sampled
Finished invoke:
  name: sample_seqs  status: 0  time: 0.070345
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background
Finished invoke:
  name: bg  status: 0  time: 0.012006
Invoking:
  meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 888.416237
Invoking:
  dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 70.522414
Invoking:
  centrimo -seqlen 384 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: centrimo  status: 0  time: 0.193641
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 0.622578
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary DNSGCYYTAMCVACTVGGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo1  status: 0  time: 0.333664
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary SGGRVTCGAACCSVKGAYCTYHHSRTTAM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo2  status: 0  time: 0.317753
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary SYSVTATAGTGTARYGGYTATCACWTYVSG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo3  status: 0  time: 0.25796
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary CCRTACAY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo4  status: 0  time: 0.193955
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary GCKCTMCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo5  status: 0  time: 0.189037
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary GCCTTAMC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo6  status: 0  time: 0.201565
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary AGMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo7  status: 0  time: 0.28364
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary GGCSCAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo8  status: 0  time: 0.196699
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary AKCGTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo9  status: 0  time: 0.19116
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary CACGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo10  status: 0  time: 0.207917
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary CGCGGGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo11  status: 0  time: 0.185341
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary ATGGCAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo12  status: 0  time: 0.196782
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background -primary AATMCAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml
Finished invoke:
  name: spamo13  status: 0  time: 0.195795
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif DNSGCYYTAMCVACTVGGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo1  status: 0  time: 0.208601
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif SGGRVTCGAACCSVKGAYCTYHHSRTTAM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo2  status: 0  time: 0.220888
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif SYSVTATAGTGTARYGGYTATCACWTYVSG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo3  status: 0  time: 0.217507
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif CCRTACAY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo4  status: 0  time: 0.166267
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif GCKCTMCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo5  status: 0  time: 0.144326
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif GCCTTAMC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo6  status: 0  time: 0.154411
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif AGMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo7  status: 0  time: 0.121161
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif GGCSCAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo8  status: 0  time: 0.159814
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif AKCGTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo9  status: 0  time: 0.136998
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif CACGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo10  status: 0  time: 0.137112
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif CGCGGGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo11  status: 0  time: 0.13412
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif ATGGCAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo12  status: 0  time: 0.151574
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/background --motif AATMCAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/AWRI1631--YAP6.fa
Finished invoke:
  name: fimo13  status: 0  time: 0.15793
Writing output
Invoking:
  meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--YAP6/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.190043
Done