Invoking:
  getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.024857
Invoking:
  fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.066318
Invoking:
  fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.085668
Invoking:
  fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.030213
Invoking:
  fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-sampled
Finished invoke:
  name: sample_seqs  status: 0  time: 0.069766
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background
Finished invoke:
  name: bg  status: 0  time: 0.018205
Invoking:
  meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 808.443058
Invoking:
  dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 77.941532
Invoking:
  centrimo -seqlen 436 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: centrimo  status: 0  time: 0.16457
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 0.559731
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary GSBYNYKTGGCBYAGTKGKTARRG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo1  status: 0  time: 0.348395
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary RAGRTCMBSGGTTCGATYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo2  status: 0  time: 0.342961
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary ACGGTGAAAGCGTGATGTGATAGCCGTTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo3  status: 0  time: 0.244272
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary TTCTTB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo4  status: 0  time: 0.279245
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary CCWTAACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo5  status: 0  time: 0.18807
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary ATGTAYGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo6  status: 0  time: 0.159801
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo7  status: 0  time: 0.196404
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary ATAGTGTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo8  status: 0  time: 0.184547
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary GCTAASA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo9  status: 0  time: 0.199772
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary TACCWCTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo10  status: 0  time: 0.199573
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary CAACAARG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo11  status: 0  time: 0.207324
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary GRTCTCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo12  status: 0  time: 0.224385
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -primary ACGCSACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml
Finished invoke:
  name: spamo13  status: 0  time: 0.203552
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif GSBYNYKTGGCBYAGTKGKTARRG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo1  status: 0  time: 0.289356
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif RAGRTCMBSGGTTCGATYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo2  status: 0  time: 0.249295
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif ACGGTGAAAGCGTGATGTGATAGCCGTTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo3  status: 0  time: 0.251306
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif TTCTTB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo4  status: 0  time: 0.152804
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif CCWTAACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo5  status: 0  time: 0.164094
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif ATGTAYGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo6  status: 0  time: 0.166581
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo7  status: 0  time: 0.167527
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif ATAGTGTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo8  status: 0  time: 0.164946
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif GCTAASA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo9  status: 0  time: 0.155053
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif TACCWCTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo10  status: 0  time: 0.158961
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif CAACAARG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo11  status: 0  time: 0.174482
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif GRTCTCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo12  status: 0  time: 0.165344
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background --motif ACGCSACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/AWRI1631--TEC1.fa
Finished invoke:
  name: fimo13  status: 0  time: 0.156587
Writing output
Invoking:
  meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.156169
Done