******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:722259-722359 1.0000 100 chrXIII:510889-511211 1.0000 100 chrII:409967-410403 1.0000 100 chrXV:671072-671388 1.0000 100 chrXIII:761817-762104 1.0000 100 chrIX:316183-316573 1.0000 100 chrVII:823327-823697 1.0000 100 chrVIII:381437-382097 1.0000 100 chrXIV:494067-494294 1.0000 100 chrV:117755-118258 1.0000 100 chrXIV:569765-570100 1.0000 100 chrVII:557689-557930 1.0000 100 chrX:390942-391042 1.0000 100 chrXV:288017-288582 1.0000 100 chrXIII:500450-500559 1.0000 100 chrXV:226509-226854 1.0000 100 chrVII:437132-437358 1.0000 100 chrXIII:420448-420818 1.0000 100 chrVIII:147614-147806 1.0000 100 chrV:311352-311707 1.0000 100 chrXII:645935-646090 1.0000 100 chrIX:183290-183697 1.0000 100 chrVII:254148-254524 1.0000 100 chrVIII:34832-35235 1.0000 100 chrXII:232020-234251 1.0000 100 chrVII:323778-324107 1.0000 100 chrXIV:350187-350623 1.0000 100 chrV:396968-397346 1.0000 100 chrXVI:810545-810823 1.0000 100 chrII:374722-375158 1.0000 100 chrV:77497-78436 1.0000 100 chrVII:845476-845868 1.0000 100 chrXII:637152-637840 1.0000 100 chrXII:781486-781825 1.0000 100 chrVII:774177-774568 1.0000 100 chrXVI:579720-580156 1.0000 100 chrI:166131-166514 1.0000 100 chrXII:930792-930950 1.0000 100 chrVIII:505843-506149 1.0000 100 chrXV:254423-254593 1.0000 100 chrVII:702943-703209 1.0000 100 chrXV:908639-908848 1.0000 100 chrXV:92950-93353 1.0000 100 chrXIII:754463-754725 1.0000 100 chrXII:837797-839016 1.0000 100 chrVIII:55970-56406 1.0000 100 chrIII:124454-124890 1.0000 100 chrXII:1018330-1018446 1.0000 100 chrIV:434134-434456 1.0000 100 chrXV:444800-446118 1.0000 100 chrXV:869846-870282 1.0000 100 chrV:551180-551512 1.0000 100 chrVIII:124078-124514 1.0000 100 chrXIII:372345-372614 1.0000 100 chrIV:1080351-1080840 1.0000 100 chrXI:364785-365043 1.0000 100 chrXIII:480516-480842 1.0000 100 chrXVI:452015-452451 1.0000 100 chrII:642895-643230 1.0000 100 chrXIV:241447-241675 1.0000 100 chrVIII:451266-452955 1.0000 100 chrV:51959-52189 1.0000 100 chrII:556070-556240 1.0000 100 chrXIII:352096-352438 1.0000 100 chrVI:210494-210874 1.0000 100 chrVII:648992-649298 1.0000 100 chrII:414786-415222 1.0000 100 chrXI:551983-552419 1.0000 100 chrIX:317007-317243 1.0000 100 chrXI:431327-431632 1.0000 100 chrXIV:585703-586467 1.0000 100 chrVII:317077-317303 1.0000 100 chrXIII:696525-696777 1.0000 100 chrXII:499370-499630 1.0000 100 chrX:617734-617834 1.0000 100 chrVII:828525-828972 1.0000 100 chrI:71938-73176 1.0000 100 chrIII:227785-228171 1.0000 100 chrXVI:303630-303993 1.0000 100 chrV:69056-69383 1.0000 100 chrIX:127008-128096 1.0000 100 chrIV:579555-580419 1.0000 100 chrXV:159263-160165 1.0000 100 chrXII:201779-202356 1.0000 100 chrVII:310831-312105 1.0000 100 chrXII:253963-254137 1.0000 100 chrXII:953327-953472 1.0000 100 chrVII:345864-346627 1.0000 100 chrVII:115335-115728 1.0000 100 chrX:73454-73554 1.0000 100 chrIX:23931-24367 1.0000 100 chrXII:833575-833871 1.0000 100 chrXIII:220493-220929 1.0000 100 chrXI:245671-246050 1.0000 100 chrXII:1025197-1025633 1.0000 100 chrIV:411281-411612 1.0000 100 chrXV:867715-868091 1.0000 100 chrXII:639754-640286 1.0000 100 chrXII:656822-657165 1.0000 100 chrVIII:266210-266419 1.0000 100 chrXV:253881-254065 1.0000 100 chrV:362804-363240 1.0000 100 chrIV:1359437-1359787 1.0000 100 chrX:197200-197300 1.0000 100 chrXII:875207-875603 1.0000 100 chrXV:409540-409976 1.0000 100 chrXI:520112-520548 1.0000 100 chrXVI:376907-377343 1.0000 100 chrIV:1075326-1075704 1.0000 100 chrV:130988-131347 1.0000 100 chrVI:226585-226912 1.0000 100 chrIV:794359-795010 1.0000 100 chrII:563709-564145 1.0000 100 chrV:423990-424138 1.0000 100 chrVI:64204-64425 1.0000 100 chrII:408509-409020 1.0000 100 chrXIII:288244-288680 1.0000 100 chrX:538421-538521 1.0000 100 chrV:101011-101447 1.0000 100 chrIII:123434-123815 1.0000 100 chrII:191965-192401 1.0000 100 chrII:87924-88588 1.0000 100 chrVII:481415-482896 1.0000 100 chrIV:232261-232504 1.0000 100 chrV:287308-287744 1.0000 100 chrXVI:921053-921385 1.0000 100 chrVII:366091-366762 1.0000 100 chrXIV:715930-716522 1.0000 100 chrIX:255324-255667 1.0000 100 chrV:61146-61551 1.0000 100 chrXIII:661487-662193 1.0000 100 chrXI:163870-164306 1.0000 100 chrIV:929394-929830 1.0000 100 chrXIV:63146-63536 1.0000 100 chrIV:884215-884594 1.0000 100 chrVII:545352-545486 1.0000 100 chrVIII:466822-467146 1.0000 100 chrXII:1002452-1002622 1.0000 100 chrII:407551-407976 1.0000 100 chrIX:254273-254511 1.0000 100 chrIV:1301777-1302213 1.0000 100 chrXVI:210082-210430 1.0000 100 chrVIII:105283-105591 1.0000 100 chrXII:198958-199734 1.0000 100 chrII:563588-563774 1.0000 100 chrV:438555-438866 1.0000 100 chrXVI:282388-282569 1.0000 100 chrXI:430676-431112 1.0000 100 chrII:45055-45322 1.0000 100 chrIII:149755-150117 1.0000 100 chrV:135308-135638 1.0000 100 chrVII:882432-883400 1.0000 100 chrII:36240-36632 1.0000 100 chrV:354754-355160 1.0000 100 chrII:604164-604428 1.0000 100 chrXIV:575251-575687 1.0000 100 chrXVI:689409-689843 1.0000 100 chrVIII:146031-146466 1.0000 100 chrII:266226-266590 1.0000 100 chrXVI:242705-243512 1.0000 100 chrVII:727711-727846 1.0000 100 chrX:233740-233840 1.0000 100 chrXV:424198-424691 1.0000 100 chrIV:1269013-1269449 1.0000 100 chrX:663634-663734 1.0000 100 chrXIV:106982-107500 1.0000 100 chrXIII:222591-223027 1.0000 100 chrIV:1402724-1403307 1.0000 100 chrXIV:663977-664413 1.0000 100 chrXVI:280633-281841 1.0000 100 chrXI:163668-163853 1.0000 100 chrXIII:296822-298835 1.0000 100 chrX:355211-355311 1.0000 100 chrXI:334400-334603 1.0000 100 chrXII:731960-732271 1.0000 100 chrXIII:652068-652936 1.0000 100 chrI:180953-181421 1.0000 100 chrXII:568090-568323 1.0000 100 chrXI:517740-518228 1.0000 100 chrXVI:576065-576305 1.0000 100 chrII:167968-168192 1.0000 100 chrII:372984-373250 1.0000 100 chrIV:308056-308339 1.0000 100 chrV:363742-363864 1.0000 100 chrIII:295315-295810 1.0000 100 chrXI:104936-105372 1.0000 100 chrXV:678882-679154 1.0000 100 chrII:236519-236955 1.0000 100 chrVIII:237742-238118 1.0000 100 chrV:284896-285233 1.0000 100 chrXV:253157-253409 1.0000 100 chrX:120485-120585 1.0000 100 chrXV:1028695-1029075 1.0000 100 chrVII:506777-507213 1.0000 100 chrVIII:134184-134528 1.0000 100 chrXIV:87213-87793 1.0000 100 chrII:477065-477601 1.0000 100 chrXII:348291-348535 1.0000 100 chrXV:903891-904799 1.0000 100 chrII:256418-256854 1.0000 100 chrVI:64374-64810 1.0000 100 chrXV:385361-385492 1.0000 100 chrXV:978703-979124 1.0000 100 chrV:399182-399579 1.0000 100 chrXIV:65164-65600 1.0000 100 chrXIII:301739-302175 1.0000 100 chrXVI:75034-75505 1.0000 100 chrXIII:20855-21291 1.0000 100 chrXII:789792-790228 1.0000 100 chrXIV:567972-568480 1.0000 100 chrXII:366083-366464 1.0000 100 chrX:531663-531763 1.0000 100 chrIII:107375-107679 1.0000 100 chrXIII:119291-119459 1.0000 100 chrV:61547-62109 1.0000 100 chrXII:368254-368471 1.0000 100 chrIX:197414-197805 1.0000 100 chrXI:432223-432470 1.0000 100 chrXIII:22944-23403 1.0000 100 chrV:143159-143595 1.0000 100 chrVII:857274-857625 1.0000 100 chrXIII:279982-280136 1.0000 100 chrXI:162319-162715 1.0000 100 chrXVI:795120-795283 1.0000 100 chrIV:1490036-1490460 1.0000 100 chrI:68355-68540 1.0000 100 chrX:745068-745168 1.0000 100 chrVII:439097-439821 1.0000 100 chrXVI:585869-586076 1.0000 100 chrVI:221781-222019 1.0000 100 chrXV:438483-438879 1.0000 100 chrXV:340185-340544 1.0000 100 chrXVI:860205-860666 1.0000 100 chrXV:989091-989452 1.0000 100 chrXVI:450003-450439 1.0000 100 chrXI:74435-74800 1.0000 100 chrXII:710653-710851 1.0000 100 chrXIII:302833-303029 1.0000 100 chrXII:300325-300736 1.0000 100 chrX:606317-606417 1.0000 100 chrXV:281991-282338 1.0000 100 chrII:83126-83562 1.0000 100 chrIX:212777-213213 1.0000 100 chrIV:117212-117558 1.0000 100 chrIV:44116-44552 1.0000 100 chrXIV:414446-414882 1.0000 100 chrII:197335-197637 1.0000 100 chrIV:1360232-1360668 1.0000 100 chrVII:661573-661930 1.0000 100 chrXII:603623-604019 1.0000 100 chrXIII:162036-162540 1.0000 100 chrXII:922153-922526 1.0000 100 chrXII:1012173-1012311 1.0000 100 chrXII:819356-819792 1.0000 100 chrXVI:795219-795655 1.0000 100 chrXV:877787-878008 1.0000 100 chrII:226933-227316 1.0000 100 chrX:79357-79457 1.0000 100 chrXII:566426-566692 1.0000 100 chrXIII:118471-118907 1.0000 100 chrIX:370231-370606 1.0000 100 chrVIII:125938-126281 1.0000 100 chrXVI:622383-622820 1.0000 100 chrXII:498553-498819 1.0000 100 chrXII:924472-924690 1.0000 100 chrX:156500-156600 1.0000 100 chrX:156716-156816 1.0000 100 chrX:204542-204642 1.0000 100 chrXIII:732071-732363 1.0000 100 chrVII:289282-289718 1.0000 100 chrVII:736154-736568 1.0000 100 chrX:651320-651420 1.0000 100 chrX:123094-123194 1.0000 100 chrIV:83391-83784 1.0000 100 chrXVI:744118-744507 1.0000 100 chrV:469298-469607 1.0000 100 chrXVI:856731-857128 1.0000 100 chrXV:216285-216664 1.0000 100 chrIV:619838-620205 1.0000 100 chrXII:734656-734960 1.0000 100 chrIV:644986-645390 1.0000 100 chrVIII:504999-505435 1.0000 100 chrXII:515846-515976 1.0000 100 chrIV:835806-836139 1.0000 100 chrXVI:76381-76698 1.0000 100 chrVIII:175076-175385 1.0000 100 chrVI:95509-95821 1.0000 100 chrXII:65459-65703 1.0000 100 chrIV:667834-668243 1.0000 100 chrXVI:718419-719157 1.0000 100 chrX:76307-76407 1.0000 100 chrV:174787-175018 1.0000 100 chrII:405690-406211 1.0000 100 chrVII:876221-876551 1.0000 100 chrXVI:435736-436124 1.0000 100 chrIV:130028-130318 1.0000 100 chrVII:110461-110815 1.0000 100 chrXII:499099-499437 1.0000 100 chrIII:82363-82675 1.0000 100 chrIII:177262-177667 1.0000 100 chrXII:243053-243489 1.0000 100 chrII:88940-89376 1.0000 100 chrX:76041-76141 1.0000 100 chrXIII:590115-590347 1.0000 100 chrXI:334613-334825 1.0000 100 chrVII:518663-519099 1.0000 100 chrIX:248667-249046 1.0000 100 chrVIII:35641-35916 1.0000 100 chrIX:98879-99038 1.0000 100 chrXI:557020-557456 1.0000 100 chrII:606367-606803 1.0000 100 chrX:703289-703389 1.0000 100 chrII:406722-407158 1.0000 100 chrXIII:259046-259392 1.0000 100 chrVII:779441-779836 1.0000 100 chrXIV:442851-443277 1.0000 100 chrXV:900162-900598 1.0000 100 chrXV:589599-590035 1.0000 100 chrV:431042-431518 1.0000 100 chrXIV:102526-103125 1.0000 100 chrII:333823-334329 1.0000 100 chrXVI:173032-173329 1.0000 100 chrXII:636933-637231 1.0000 100 chrVII:914887-915180 1.0000 100 chrVII:574816-575231 1.0000 100 chrIV:125187-125623 1.0000 100 chrXII:262889-263336 1.0000 100 chrIV:980839-981200 1.0000 100 chrX:607181-607281 1.0000 100 chrX:354032-354132 1.0000 100 chrIV:234124-234693 1.0000 100 chrXV:976240-976641 1.0000 100 chrV:311713-312276 1.0000 100 chrXII:950076-950556 1.0000 100 chrXIV:68246-68682 1.0000 100 chrVII:148512-148695 1.0000 100 chrV:138482-139090 1.0000 100 chrIV:802599-802982 1.0000 100 chrIV:490667-491103 1.0000 100 chrXI:261513-262191 1.0000 100 chrVI:223381-223520 1.0000 100 chrXIV:104621-105183 1.0000 100 chrIX:191079-191515 1.0000 100 chrXII:838814-839250 1.0000 100 chrXV:912330-912642 1.0000 100 chrXV:742241-742543 1.0000 100 chrXI:101121-101557 1.0000 100 chrI:143179-143615 1.0000 100 chrIX:189848-190210 1.0000 100 chrVI:75545-75981 1.0000 100 chrXV:961061-961497 1.0000 100 chrVII:987041-987477 1.0000 100 chrXV:779725-780976 1.0000 100 chrXII:628201-628636 1.0000 100 chrXIV:303295-303550 1.0000 100 chrX:227748-227848 1.0000 100 chrX:68982-69082 1.0000 100 chrVII:438624-438868 1.0000 100 chrXVI:645376-645715 1.0000 100 chrV:85763-86801 1.0000 100 chrXIII:742790-743140 1.0000 100 chrV:288188-288683 1.0000 100 chrX:58977-59077 1.0000 100 chrII:82254-82690 1.0000 100 chrVIII:201648-202084 1.0000 100 chrIX:210478-210883 1.0000 100 chrXVI:829104-829322 1.0000 100 chrXV:168016-168400 1.0000 100 chrIV:358125-358355 1.0000 100 chrXVI:404924-405721 1.0000 100 chrI:141637-141908 1.0000 100 chrXII:369307-370334 1.0000 100 chrIV:1305451-1305816 1.0000 100 chrIV:491582-492018 1.0000 100 chrXI:140782-141304 1.0000 100 chrXII:713180-713530 1.0000 100 chrVII:825678-826114 1.0000 100 chrVII:328418-328846 1.0000 100 chrV:78954-79390 1.0000 100 chrIV:1300977-1301264 1.0000 100 chrIX:394736-395149 1.0000 100 chrIV:118329-118765 1.0000 100 chrXIII:362909-363257 1.0000 100 chrXII:374180-374591 1.0000 100 chrXV:113649-113981 1.0000 100 chrV:225434-225724 1.0000 100 chrII:332352-332709 1.0000 100 chrXIV:374662-375101 1.0000 100 chrXVI:701304-701471 1.0000 100 chrXV:300934-301321 1.0000 100 chrX:440592-440692 1.0000 100 chrVII:205340-205973 1.0000 100 chrXVI:55924-56454 1.0000 100 chrVI:137299-137716 1.0000 100 chrI:142509-143074 1.0000 100 chrXI:463255-463855 1.0000 100 chrV:483213-483391 1.0000 100 chrXII:92376-92780 1.0000 100 chrVIII:382931-383416 1.0000 100 chrVI:83963-84180 1.0000 100 chrIV:1238144-1238580 1.0000 100 chrX:74791-74891 1.0000 100 chrIX:99660-99976 1.0000 100 chrXI:355944-356492 1.0000 100 chrXI:558901-559337 1.0000 100 chrIV:45569-46005 1.0000 100 chrXII:638843-639140 1.0000 100 chrXIII:504891-505133 1.0000 100 chrXVI:432727-434031 1.0000 100 chrX:391860-391960 1.0000 100 chrVII:738964-739339 1.0000 100 chrVI:53324-53482 1.0000 100 chrVIII:273239-273923 1.0000 100 chrXVI:693297-693733 1.0000 100 chrXIII:500168-500430 1.0000 100 chrXI:109785-109967 1.0000 100 chrVI:40379-40815 1.0000 100 chrIV:366093-366335 1.0000 100 chrV:140508-140849 1.0000 100 chrII:287835-288228 1.0000 100 chrIV:341314-341580 1.0000 100 chrXIII:886965-887401 1.0000 100 chrVII:440545-440990 1.0000 100 chrX:378211-378311 1.0000 100 chrXII:796992-797367 1.0000 100 chrIV:235025-235461 1.0000 100 chrXIII:626363-626887 1.0000 100 chrIV:322991-323325 1.0000 100 chrXII:794176-795535 1.0000 100 chrXIV:518955-519191 1.0000 100 chrXV:80691-80826 1.0000 100 chrIV:356443-356879 1.0000 100 chrV:85106-85805 1.0000 100 chrXVI:769052-769506 1.0000 100 chrIV:1489059-1489935 1.0000 100 chrXII:819927-820363 1.0000 100 chrIV:538997-539225 1.0000 100 chrII:164995-165519 1.0000 100 chrX:424328-424428 1.0000 100 chrXV:228156-228522 1.0000 100 chrVIII:505198-505634 1.0000 100 chrIX:427120-427826 1.0000 100 chrV:141026-141385 1.0000 100 chrVII:806820-807036 1.0000 100 chrXVI:821610-822289 1.0000 100 chrX:541388-541488 1.0000 100 chrXIII:732740-733176 1.0000 100 chrV:492162-492592 1.0000 100 chrXI:610447-611538 1.0000 100 chrXII:784191-784579 1.0000 100 chrII:614455-614891 1.0000 100 chrII:605760-606109 1.0000 100 chrVIII:555761-556197 1.0000 100 chrXIII:164091-164350 1.0000 100 chrV:423130-423454 1.0000 100 chrVII:610845-611281 1.0000 100 chrV:435649-435976 1.0000 100 chrXVI:819342-819753 1.0000 100 chrXVI:795534-795970 1.0000 100 chrII:301352-301497 1.0000 100 chrI:142372-142574 1.0000 100 chrXV:110247-110683 1.0000 100 chrXII:818457-818821 1.0000 100 chrXIII:808131-808508 1.0000 100 chrVII:412165-412538 1.0000 100 chrXIII:379215-379577 1.0000 100 chrXVI:696946-697151 1.0000 100 chrXV:796919-797645 1.0000 100 chrXI:68696-69027 1.0000 100 chrXII:932113-932471 1.0000 100 chrXV:28702-29138 1.0000 100 chrVII:787671-787837 1.0000 100 chrXI:258519-260036 1.0000 100 chrVII:556213-556649 1.0000 100 chrXIII:290630-290993 1.0000 100 chrVII:807235-807344 1.0000 100 chrI:151467-151903 1.0000 100 chrIV:1443765-1444121 1.0000 100 chrXI:101446-101882 1.0000 100 chrXV:1027915-1028555 1.0000 100 chrIX:141463-142054 1.0000 100 chrII:9427-9758 1.0000 100 chrXII:592420-592786 1.0000 100 chrXII:460400-460853 1.0000 100 chrIX:325691-326155 1.0000 100 chrXI:108812-109053 1.0000 100 chrXIII:880535-880897 1.0000 100 chrIII:71552-71732 1.0000 100 chrXV:968123-968330 1.0000 100 chrXVI:591108-591247 1.0000 100 chrXIV:619778-619990 1.0000 100 chrXIII:253345-253604 1.0000 100 chrV:424932-425220 1.0000 100 chrXIII:702189-702625 1.0000 100 chrV:487219-487552 1.0000 100 chrXI:517244-517526 1.0000 100 chrXIV:110722-110963 1.0000 100 chrXV:866585-866917 1.0000 100 chrVI:162062-162389 1.0000 100 chrX:144835-144935 1.0000 100 chrXVI:699989-700341 1.0000 100 chrIV:437627-437964 1.0000 100 chrXII:1028886-1029322 1.0000 100 chrIX:257387-257741 1.0000 100 chrVII:920589-921025 1.0000 100 chrVII:555360-555662 1.0000 100 chrIII:142613-142937 1.0000 100 chrVII:700481-701208 1.0000 100 chrIV:1156353-1156575 1.0000 100 chrXV:841600-842036 1.0000 100 chrIV:362754-363190 1.0000 100 chrV:305802-306172 1.0000 100 chrXVI:214865-215184 1.0000 100 chrIV:488511-489051 1.0000 100 chrVII:541679-542130 1.0000 100 chrVII:846859-847295 1.0000 100 chrVI:65018-65299 1.0000 100 chrVII:788307-788690 1.0000 100 chrI:182430-182638 1.0000 100 chrXII:839229-839406 1.0000 100 chrXIV:525036-525238 1.0000 100 chrXV:587793-588286 1.0000 100 chrXVI:406222-406506 1.0000 100 chrIV:1175645-1176031 1.0000 100 chrXIII:651363-651799 1.0000 100 chrXIII:223426-223546 1.0000 100 chrVII:149148-149497 1.0000 100 chrXV:980533-981038 1.0000 100 chrXII:796445-796820 1.0000 100 chrXV:925123-925465 1.0000 100 chrX:139195-139295 1.0000 100 chrXIV:88891-89745 1.0000 100 chrXII:962865-963230 1.0000 100 chrIV:992658-993015 1.0000 100 chrVI:157827-158188 1.0000 100 chrIV:359405-359811 1.0000 100 chrX:122248-122348 1.0000 100 chrXII:230373-231040 1.0000 100 chrV:461807-462253 1.0000 100 chrIV:357255-357678 1.0000 100 chrXIV:722584-723020 1.0000 100 chrII:235193-235468 1.0000 100 chrVIII:126545-126981 1.0000 100 chrVII:648198-648346 1.0000 100 chrV:396248-396551 1.0000 100 chrVII:794258-794586 1.0000 100 chrII:60909-61211 1.0000 100 chrXVI:173300-173779 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 548 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 54800 N= 548 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.297 C 0.203 G 0.203 T 0.297 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--TEC1/background): A 0.307 C 0.193 G 0.193 T 0.307 ******************************************************************************** ******************************************************************************** MOTIF GSBYNYKTGGCBYAGTKGKTARRG MEME-1 width = 24 sites = 97 llr = 1538 E-value = 1.3e-275 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSBYNYKTGGCBYAGTKGKTARRG MEME-1 Description -------------------------------------------------------------------------------- Simplified A :::1212:3:::1a2::::26551 pos.-specific C :43524::::854:::2::1:121 probability G 9531224:7a:32:8:5a511337 matrix T 1144345a::234::a3:563111 bits 2.4 * * 2.1 * * 1.9 * * * 1.7 * * * ** * Relative 1.4 * **** *** * Entropy 1.2 * **** *** * (22.9 bits) 0.9 * **** *** ** * 0.7 ** ***** *** ** * 0.5 **** ****** ****** * * 0.2 **** ******************* 0.0 ------------------------ Multilevel GGTCTCTTGGCCCAGTGGGTAAAG consensus CCTCTG A TTT T TATGG sequence G G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCBYAGTKGKTARRG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------ chrXVI:819342-819753 + 32 7.05e-12 ACAATAGAAT GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrVII:738964-739339 + 21 7.05e-12 GAAAAAAATA GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrIX:210478-210883 + 35 7.05e-12 TGAAATATCT GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrIV:667834-668243 - 69 7.05e-12 TCCAAATT GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrXII:734656-734960 + 44 7.05e-12 AACAAAGTTT GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrII:197335-197637 + 58 7.05e-12 CAGTAATCAA GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrV:551180-551512 - 39 7.05e-12 ACAGATTACA GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrIX:183290-183697 - 47 7.05e-12 ACAAATTCCT GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrXIV:569765-570100 - 35 7.05e-12 AGATAACAGT GGTCTCTTGGCCCAGTTGGTTAAG GCACCGTGCT chrXVI:856731-857128 + 23 6.56e-11 AACAAGATTC GGGCGTGTGGCGTAGTCGGTAGCG CGCTCCCTTA chrXI:517740-518228 + 54 6.56e-11 TATCTACTAT GGGCGTGTGGCGTAGTCGGTAGCG CGCTCCCTTA chrX:197200-197300 - 69 6.56e-11 TAATATTA GGGCGTGTGGCGTAGTCGGTAGCG CGCTCCCTTA chrXII:656822-657165 - 40 6.56e-11 CAAGAAAATT GGGCGTGTGGCGTAGTCGGTAGCG CGCTCCCTTA chrVII:774177-774568 + 27 6.56e-11 TCAATTAATT GGGCGTGTGGCGTAGTCGGTAGCG CGCTCCCTTA chrVII:794258-794586 + 45 1.41e-10 CATAGATTGC GGGCACATGGCGCAGTTGGTAGCG CGCTTCCCTT chrIV:884215-884594 + 7 1.41e-10 GAAAAT GCTCGTGTAGCTCAGTGGTTAGAG CTTCGTGCTT chrIV:437627-437964 + 27 5.53e-10 TCATTAGTAA GGCAACTTGGCCGAGTGGTTAAGG CGAAAGATTA chrIV:1305451-1305816 + 47 5.53e-10 TACAAATTAA GGCAACTTGGCCGAGTGGTTAAGG CGAAAGATTA chrIV:980839-981200 - 63 5.53e-10 TGTAAATTGA GGCAACTTGGCCGAGTGGTTAAGG CGAAAGATTA chrXIII:259046-259392 - 47 5.53e-10 AAGTTAGTAT GGCAACTTGGCCGAGTGGTTAAGG CGAAAGATTA chrXII:592420-592786 - 43 1.38e-09 AACATACAAT GGGAGTTTGGCCGAGTGGTTTAAG GCGTCAGATT chrXII:731960-732271 + 25 1.38e-09 AACATACAAT GGGAGTTTGGCCGAGTGGTTTAAG GCGTCAGATT chrX:617734-617834 + 45 1.38e-09 AACAAACAAT GGGAGTTTGGCCGAGTGGTTTAAG GCGTCAGATT chrIX:248667-249046 + 44 1.60e-09 CATTGTTTTA GGCACTATGGCCGAGTGGTTAAGG CGACAGACTT chrIII:227785-228171 + 14 1.60e-09 AAATCGAAAT GGCACTATGGCCGAGTGGTTAAGG CGAGAGACTC chrXII:784191-784579 + 19 1.85e-09 TTGTTCAACC GTCCCAGTGGCCGAGTGGTTAAGG CGATGCCTGC chrXV:113649-113981 + 37 3.21e-09 CAGAGATTTA GCTTCTATGGCCAAGTTGGTAAGG CGCCACACTA chrX:58977-59077 - 24 3.21e-09 TAAAATAGAA GCTTCTATGGCCAAGTTGGTAAGG CGCCACACTA chrII:266226-266590 + 20 3.21e-09 ATCAAAAACT GCTTCTATGGCCAAGTTGGTAAGG CGCCACACTA chrIV:434134-434456 - 68 3.21e-09 AAATCAGAA GCTTCTATGGCCAAGTTGGTAAGG CGCCACACTA chrV:435649-435976 - 39 5.41e-09 AACAATAAGA GCCTTGTTGGCGCAATCGGTAGCG CGTATGACTC chrVII:876221-876551 + 58 5.41e-09 TAATAGAATA GCCTTGTTGGCGCAATCGGTAGCG CGTATGACTC chrV:135308-135638 - 51 5.41e-09 CAAGAAAAAA GCCTTGTTGGCGCAATCGGTAGCG CGTATGACTC chrVI:226585-226912 - 39 5.41e-09 AGATTAAAAT GCCTTGTTGGCGCAATCGGTAGCG CGTATGACTC chrXIII:480516-480842 - 41 5.41e-09 ACAATAAGTA GCCTTGTTGGCGCAATCGGTAGCG CGTATGACTC chrVII:412165-412538 - 43 1.13e-08 TCAAAAAACT GGTTTCGTGGTCTAGTCGGTTATG GCATCTGCTT chrX:378211-378311 + 49 1.13e-08 TAAATTAATA GGTTTCGTGGTCTAGTCGGTTATG GCATCTGCTT chrV:469298-469607 + 55 1.13e-08 AGAAATAATT GGTTTCGTGGTCTAGTCGGTTATG GCATCTGCTT chrV:438555-438866 + 40 1.13e-08 CAACAAATTA GGTTTCGTGGTCTAGTCGGTTATG GCATCTGCTT chrXIII:372345-372614 - 66 1.13e-08 AATAAAACCT GGTTTCGTGGTCTAGTCGGTTATG GCATCTGCTT chrXIII:420448-420818 - 55 1.13e-08 ACAAATAACA GGTTTCGTGGTCTAGTCGGTTATG GCATCTGCTT chrVII:823327-823697 + 20 1.13e-08 CAATAAGAGT GGTTTCGTGGTCTAGTCGGTTATG GCATCTGCTT chrXIV:374662-375101 + 38 2.01e-08 AGAAAAATAA GCGGACTTAGCTCAGTTGGGAGAG CGCCAGACTG chrXII:92376-92780 + 20 2.24e-08 AAGTTAATAA GGGCGTGTGGTCTAGTGGTATGAT TCTCGCTTTG chrXV:300934-301321 + 20 2.24e-08 AGAAAAGATC GGGCGTGTGGTCTAGTGGTATGAT TCTCGCTTTG chrXII:628201-628636 + 15 2.50e-08 ACAAATAAGT GGTTGTTTGGCCGAGCGGTCTAAG GCGCCTGATT chrVII:857274-857625 - 69 2.50e-08 AAATAAGT GGTTGTTTGGCCGAGCGGTCTAAG GCGCCTGATT chrI:180953-181421 + 4 2.50e-08 AGT GGTTGTTTGGCCGAGCGGTCTAAG GCGCCTGATT chrIV:359405-359811 + 19 3.44e-08 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAG CGTTCGGCTT chrVI:157827-158188 - 27 3.44e-08 ATAAATAGAA GCGGATTTAGCTCAGTTGGGAGAG CGCCAGACTG chrXVI:769052-769506 - 50 3.44e-08 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAG CGTTCGGCTT chrVII:440545-440990 - 67 3.44e-08 TAAAATATAT GCGGATTTAGCTCAGTTGGGAGAG CGCCAGACTG chrXVI:622383-622820 - 57 3.44e-08 ATTCTGATAT GCGGATTTAGCTCAGTTGGGAGAG CGCCAGACTG chrXV:438483-438879 + 12 3.44e-08 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAG CGTTCGGCTT chrVIII:237742-238118 - 36 3.44e-08 CAAATAGTAA GCGGATTTAGCTCAGTTGGGAGAG CGCCAGACTG chrII:36240-36632 + 12 3.44e-08 TCAGTTGTAA GCGGATTTAGCTCAGTTGGGAGAG CGCCAGACTG chrXII:875207-875603 + 21 3.44e-08 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAG CGTTCGGCTT chrVII:115335-115728 + 7 3.44e-08 AACTCA TCCTTGTTAGCTCAGTTGGTAGAG CGTTCGGCTT chrXIII:352096-352438 + 63 3.44e-08 ATGAATATAA GCGGATTTAGCTCAGTTGGGAGAG CGCCAGACTG chrXII:962865-963230 - 35 6.94e-08 TATTATCGAC GGAGGGTTGGCCGAGTGGTCTAAG GCGGCAGACT chrII:9427-9758 + 41 6.94e-08 GAAAATTCGT GGAGGGTTGGCCGAGTGGTCTAAG GCGGCAGACT chrX:424328-424428 - 29 6.94e-08 TAAATAAGAT GGAGGGTTGGCCGAGTGGTCTAAG GCGGCAGACT chrXV:228156-228522 + 42 7.64e-08 TAAAATATTA GACTCCATGGCCAAGTTGGTTAAG GCGTGCGACT chrXI:74435-74800 + 57 7.64e-08 ATAGCAATTA GACTCCATGGCCAAGTTGGTTAAG GCGTGCGACT chrXVI:810545-810823 + 42 7.64e-08 CATTATTTGC GACTCCATGGCCAAGTTGGTTAAG GCGTGCGACT chrIV:1175645-1176031 + 41 9.22e-08 ACAAAACAAA GCTTCAGTAGCTCAGTAGGAAGAG CGTCAGTCTC chrXV:976240-976641 + 31 9.22e-08 TATTTTGTGC GCTTCAGTAGCTCAGTAGGAAGAG CGTCAGTCTC chrXVI:435736-436124 - 61 9.22e-08 TACAACAAAA GCTCGTATGGCGCAGTGGTAGCGC AGCAGATTGC chrII:642895-643230 - 43 9.22e-08 GTAATAGAAA GCTCGTATGGCGCAGTGGTAGCGC AGCAGATTGC chrX:390942-391042 - 24 9.22e-08 AAGAAATAGT GCTTCAGTAGCTCAGTAGGAAGAG CGTCAGTCTC chrIV:992658-993015 + 46 1.45e-07 ACAATTGTGA GCGCAAGTGGTTTAGTGGTAAAAT CCAACGTTGC chrIII:142613-142937 - 23 1.45e-07 AAGATTACTA GCGCAAGTGGTTTAGTGGTAAAAT CCAACGTTGC chrVI:162062-162389 + 53 1.45e-07 AAGAAAACAA GCGCAAGTGGTTTAGTGGTAAAAT CCAACGTTGC chrIV:83391-83784 + 11 1.45e-07 AGTTCACTTA GCGCAAGTGGTTTAGTGGTAAAAT CCAACGTTGC chrXV:281991-282338 + 50 1.45e-07 ACATGAAAGC GCGCAAGTGGTTTAGTGGTAAAAT CCAACGTTGC chrVII:845476-845868 + 27 1.45e-07 TAAATAACAA GCGCAAGTGGTTTAGTGGTAAAAT CCAACGTTGC chrXV:226509-226854 - 27 1.45e-07 AAGAAATTCA GCGCAAGTGGTTTAGTGGTAAAAT CCAACGTTGC chrXVI:744118-744507 + 22 1.72e-07 CAGTGTAAAA GCCTCCTTAGCTTAGTGGTAGAGC GTTGCACTTG chrVII:661573-661930 + 48 1.72e-07 GTAAAAATTT GCCTCCTTAGCTTAGTGGTAGAGC GTTGCACTTG chrVIII:466822-467146 + 56 1.72e-07 TGTATTTTTA GCCTCCTTAGCTTAGTGGTAGAGC GTTGCACTTG chrV:492162-492592 - 74 1.88e-07 CTA TTCCTCGTGGCCCAATGGTCACGG CGTCTGGCTA chrXII:374180-374591 + 20 1.88e-07 ATAAATCTTG TTCCTCGTGGCCCAATGGTCACGG CGTCTGGCTA chrIV:619838-620205 - 47 1.88e-07 AGAAATCTTG TTCCTCGTGGCCCAATGGTCACGG CGTCTGGCTA chrXV:340185-340544 - 34 1.88e-07 TCAAGATCTG TTCCTCGTGGCCCAATGGTCACGG CGTCTGGCTA chrX:233740-233840 + 50 1.88e-07 TATATTCTTG TTCCTCGTGGCCCAATGGTCACGG CGTCTGGCTA chrVII:736154-736568 + 29 2.04e-07 AATTTCAATA GCTCGCGTGGCGTAATGGCAACGC GTCTGACTTC chrXI:162319-162715 - 68 2.04e-07 CAAATATTA GCTCGCGTGGCGTAATGGCAACGC GTCTGACTTC chrVII:828525-828972 - 73 2.04e-07 AGTA GCTCGCGTGGCGTAATGGCAACGC GTCTGACTTC chrVII:779441-779836 + 28 3.58e-07 AGTTAACCCC GGGCGGTTAGTGTAGTGGTTATCA TCCCACCCTT chrXIII:808131-808508 - 25 5.21e-07 AGAAGAAAAA GGTCCTATAGTGTAGTGGTTATCA CTTTCGGTTC chrIV:802599-802982 - 39 5.21e-07 ATGAATTGTC GGTCCTATAGTGTAGTGGTTATCA CTTTCGGTTT chrIV:644986-645390 - 63 5.21e-07 CAGTTGTTAC GGTCCTATAGTGTAGTGGTTATCA CTTTCGGTTT chrVIII:134184-134528 + 15 5.21e-07 AGTAAGTTCC GGTCCTATAGTGTAGTGGTTATCA CTTTCGGTTT chrX:538421-538521 + 38 5.21e-07 AACCAAGTTG GTTCCGTTGGCGTAATGGTAACGC GTCTCCCTCC chrV:130988-131347 - 13 9.69e-07 ATAATTAAGA GGTTTTATAGTGTAGTGGTTATCA CTTTCGGTTT chrXII:818457-818821 + 20 1.79e-06 AATTTATTAT GCTCCTCTAGTGCAATGGTTAGCA TGCATTCTTC chrIV:1075326-1075704 - 56 1.65e-05 CCGTAATATT GTTCCAATAGTGTAGCGGCTATCA CGTTGCCTTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCBYAGTKGKTARRG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:819342-819753 7.1e-12 31_[+1]_45 chrVII:738964-739339 7.1e-12 20_[+1]_56 chrIX:210478-210883 7.1e-12 34_[+1]_42 chrIV:667834-668243 7.1e-12 68_[-1]_8 chrXII:734656-734960 7.1e-12 43_[+1]_33 chrII:197335-197637 7.1e-12 57_[+1]_19 chrV:551180-551512 7.1e-12 38_[-1]_38 chrIX:183290-183697 7.1e-12 46_[-1]_30 chrXIV:569765-570100 7.1e-12 34_[-1]_42 chrXVI:856731-857128 6.6e-11 22_[+1]_54 chrXI:517740-518228 6.6e-11 53_[+1]_23 chrX:197200-197300 6.6e-11 68_[-1]_8 chrXII:656822-657165 6.6e-11 39_[-1]_37 chrVII:774177-774568 6.6e-11 26_[+1]_50 chrVII:794258-794586 1.4e-10 44_[+1]_32 chrIV:884215-884594 1.4e-10 6_[+1]_70 chrIV:437627-437964 5.5e-10 26_[+1]_50 chrIV:1305451-1305816 5.5e-10 46_[+1]_30 chrIV:980839-981200 5.5e-10 62_[-1]_14 chrXIII:259046-259392 5.5e-10 46_[-1]_30 chrXII:592420-592786 1.4e-09 42_[-1]_34 chrXII:731960-732271 1.4e-09 24_[+1]_52 chrX:617734-617834 1.4e-09 44_[+1]_32 chrIX:248667-249046 1.6e-09 43_[+1]_33 chrIII:227785-228171 1.6e-09 13_[+1]_63 chrXII:784191-784579 1.8e-09 18_[+1]_58 chrXV:113649-113981 3.2e-09 36_[+1]_40 chrX:58977-59077 3.2e-09 23_[-1]_53 chrII:266226-266590 3.2e-09 19_[+1]_57 chrIV:434134-434456 3.2e-09 67_[-1]_9 chrV:435649-435976 5.4e-09 38_[-1]_38 chrVII:876221-876551 5.4e-09 57_[+1]_19 chrV:135308-135638 5.4e-09 50_[-1]_26 chrVI:226585-226912 5.4e-09 38_[-1]_38 chrXIII:480516-480842 5.4e-09 40_[-1]_36 chrVII:412165-412538 1.1e-08 42_[-1]_34 chrX:378211-378311 1.1e-08 48_[+1]_28 chrV:469298-469607 1.1e-08 54_[+1]_22 chrV:438555-438866 1.1e-08 39_[+1]_37 chrXIII:372345-372614 1.1e-08 65_[-1]_11 chrXIII:420448-420818 1.1e-08 54_[-1]_22 chrVII:823327-823697 1.1e-08 19_[+1]_57 chrXIV:374662-375101 2e-08 37_[+1]_39 chrXII:92376-92780 2.2e-08 19_[+1]_57 chrXV:300934-301321 2.2e-08 19_[+1]_57 chrXII:628201-628636 2.5e-08 14_[+1]_62 chrVII:857274-857625 2.5e-08 68_[-1]_8 chrI:180953-181421 2.5e-08 3_[+1]_73 chrIV:359405-359811 3.4e-08 18_[+1]_58 chrVI:157827-158188 3.4e-08 26_[-1]_50 chrXVI:769052-769506 3.4e-08 49_[-1]_27 chrVII:440545-440990 3.4e-08 66_[-1]_10 chrXVI:622383-622820 3.4e-08 56_[-1]_20 chrXV:438483-438879 3.4e-08 11_[+1]_65 chrVIII:237742-238118 3.4e-08 35_[-1]_41 chrII:36240-36632 3.4e-08 11_[+1]_65 chrXII:875207-875603 3.4e-08 20_[+1]_56 chrVII:115335-115728 3.4e-08 6_[+1]_70 chrXIII:352096-352438 3.4e-08 62_[+1]_14 chrXII:962865-963230 6.9e-08 34_[-1]_42 chrII:9427-9758 6.9e-08 40_[+1]_36 chrX:424328-424428 6.9e-08 28_[-1]_48 chrXV:228156-228522 7.6e-08 41_[+1]_35 chrXI:74435-74800 7.6e-08 56_[+1]_20 chrXVI:810545-810823 7.6e-08 41_[+1]_35 chrIV:1175645-1176031 9.2e-08 40_[+1]_36 chrXV:976240-976641 9.2e-08 30_[+1]_46 chrXVI:435736-436124 9.2e-08 60_[-1]_16 chrII:642895-643230 9.2e-08 42_[-1]_34 chrX:390942-391042 9.2e-08 23_[-1]_53 chrIV:992658-993015 1.4e-07 45_[+1]_31 chrIII:142613-142937 1.4e-07 22_[-1]_54 chrVI:162062-162389 1.4e-07 52_[+1]_24 chrIV:83391-83784 1.4e-07 10_[+1]_66 chrXV:281991-282338 1.4e-07 49_[+1]_27 chrVII:845476-845868 1.4e-07 26_[+1]_50 chrXV:226509-226854 1.4e-07 26_[-1]_50 chrXVI:744118-744507 1.7e-07 21_[+1]_55 chrVII:661573-661930 1.7e-07 47_[+1]_29 chrVIII:466822-467146 1.7e-07 55_[+1]_21 chrV:492162-492592 1.9e-07 73_[-1]_3 chrXII:374180-374591 1.9e-07 19_[+1]_57 chrIV:619838-620205 1.9e-07 46_[-1]_30 chrXV:340185-340544 1.9e-07 33_[-1]_43 chrX:233740-233840 1.9e-07 49_[+1]_27 chrVII:736154-736568 2e-07 28_[+1]_48 chrXI:162319-162715 2e-07 67_[-1]_9 chrVII:828525-828972 2e-07 72_[-1]_4 chrVII:779441-779836 3.6e-07 27_[+1]_49 chrXIII:808131-808508 5.2e-07 24_[-1]_52 chrIV:802599-802982 5.2e-07 38_[-1]_38 chrIV:644986-645390 5.2e-07 62_[-1]_14 chrVIII:134184-134528 5.2e-07 14_[+1]_62 chrX:538421-538521 5.2e-07 37_[+1]_39 chrV:130988-131347 9.7e-07 12_[-1]_64 chrXII:818457-818821 1.8e-06 19_[+1]_57 chrIV:1075326-1075704 1.7e-05 55_[-1]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCBYAGTKGKTARRG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSBYNYKTGGCBYAGTKGKTARRG width=24 seqs=97 chrXVI:819342-819753 ( 32) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrVII:738964-739339 ( 21) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrIX:210478-210883 ( 35) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrIV:667834-668243 ( 69) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrXII:734656-734960 ( 44) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrII:197335-197637 ( 58) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrV:551180-551512 ( 39) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrIX:183290-183697 ( 47) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrXIV:569765-570100 ( 35) GGTCTCTTGGCCCAGTTGGTTAAG 1 chrXVI:856731-857128 ( 23) GGGCGTGTGGCGTAGTCGGTAGCG 1 chrXI:517740-518228 ( 54) GGGCGTGTGGCGTAGTCGGTAGCG 1 chrX:197200-197300 ( 69) GGGCGTGTGGCGTAGTCGGTAGCG 1 chrXII:656822-657165 ( 40) GGGCGTGTGGCGTAGTCGGTAGCG 1 chrVII:774177-774568 ( 27) GGGCGTGTGGCGTAGTCGGTAGCG 1 chrVII:794258-794586 ( 45) GGGCACATGGCGCAGTTGGTAGCG 1 chrIV:884215-884594 ( 7) GCTCGTGTAGCTCAGTGGTTAGAG 1 chrIV:437627-437964 ( 27) GGCAACTTGGCCGAGTGGTTAAGG 1 chrIV:1305451-1305816 ( 47) GGCAACTTGGCCGAGTGGTTAAGG 1 chrIV:980839-981200 ( 63) GGCAACTTGGCCGAGTGGTTAAGG 1 chrXIII:259046-259392 ( 47) GGCAACTTGGCCGAGTGGTTAAGG 1 chrXII:592420-592786 ( 43) GGGAGTTTGGCCGAGTGGTTTAAG 1 chrXII:731960-732271 ( 25) GGGAGTTTGGCCGAGTGGTTTAAG 1 chrX:617734-617834 ( 45) GGGAGTTTGGCCGAGTGGTTTAAG 1 chrIX:248667-249046 ( 44) GGCACTATGGCCGAGTGGTTAAGG 1 chrIII:227785-228171 ( 14) GGCACTATGGCCGAGTGGTTAAGG 1 chrXII:784191-784579 ( 19) GTCCCAGTGGCCGAGTGGTTAAGG 1 chrXV:113649-113981 ( 37) GCTTCTATGGCCAAGTTGGTAAGG 1 chrX:58977-59077 ( 24) GCTTCTATGGCCAAGTTGGTAAGG 1 chrII:266226-266590 ( 20) GCTTCTATGGCCAAGTTGGTAAGG 1 chrIV:434134-434456 ( 68) GCTTCTATGGCCAAGTTGGTAAGG 1 chrV:435649-435976 ( 39) GCCTTGTTGGCGCAATCGGTAGCG 1 chrVII:876221-876551 ( 58) GCCTTGTTGGCGCAATCGGTAGCG 1 chrV:135308-135638 ( 51) GCCTTGTTGGCGCAATCGGTAGCG 1 chrVI:226585-226912 ( 39) GCCTTGTTGGCGCAATCGGTAGCG 1 chrXIII:480516-480842 ( 41) GCCTTGTTGGCGCAATCGGTAGCG 1 chrVII:412165-412538 ( 43) GGTTTCGTGGTCTAGTCGGTTATG 1 chrX:378211-378311 ( 49) GGTTTCGTGGTCTAGTCGGTTATG 1 chrV:469298-469607 ( 55) GGTTTCGTGGTCTAGTCGGTTATG 1 chrV:438555-438866 ( 40) GGTTTCGTGGTCTAGTCGGTTATG 1 chrXIII:372345-372614 ( 66) GGTTTCGTGGTCTAGTCGGTTATG 1 chrXIII:420448-420818 ( 55) GGTTTCGTGGTCTAGTCGGTTATG 1 chrVII:823327-823697 ( 20) GGTTTCGTGGTCTAGTCGGTTATG 1 chrXIV:374662-375101 ( 38) GCGGACTTAGCTCAGTTGGGAGAG 1 chrXII:92376-92780 ( 20) GGGCGTGTGGTCTAGTGGTATGAT 1 chrXV:300934-301321 ( 20) GGGCGTGTGGTCTAGTGGTATGAT 1 chrXII:628201-628636 ( 15) GGTTGTTTGGCCGAGCGGTCTAAG 1 chrVII:857274-857625 ( 69) GGTTGTTTGGCCGAGCGGTCTAAG 1 chrI:180953-181421 ( 4) GGTTGTTTGGCCGAGCGGTCTAAG 1 chrIV:359405-359811 ( 19) TCCTTGTTAGCTCAGTTGGTAGAG 1 chrVI:157827-158188 ( 27) GCGGATTTAGCTCAGTTGGGAGAG 1 chrXVI:769052-769506 ( 50) TCCTTGTTAGCTCAGTTGGTAGAG 1 chrVII:440545-440990 ( 67) GCGGATTTAGCTCAGTTGGGAGAG 1 chrXVI:622383-622820 ( 57) GCGGATTTAGCTCAGTTGGGAGAG 1 chrXV:438483-438879 ( 12) TCCTTGTTAGCTCAGTTGGTAGAG 1 chrVIII:237742-238118 ( 36) GCGGATTTAGCTCAGTTGGGAGAG 1 chrII:36240-36632 ( 12) GCGGATTTAGCTCAGTTGGGAGAG 1 chrXII:875207-875603 ( 21) TCCTTGTTAGCTCAGTTGGTAGAG 1 chrVII:115335-115728 ( 7) TCCTTGTTAGCTCAGTTGGTAGAG 1 chrXIII:352096-352438 ( 63) GCGGATTTAGCTCAGTTGGGAGAG 1 chrXII:962865-963230 ( 35) GGAGGGTTGGCCGAGTGGTCTAAG 1 chrII:9427-9758 ( 41) GGAGGGTTGGCCGAGTGGTCTAAG 1 chrX:424328-424428 ( 29) GGAGGGTTGGCCGAGTGGTCTAAG 1 chrXV:228156-228522 ( 42) GACTCCATGGCCAAGTTGGTTAAG 1 chrXI:74435-74800 ( 57) GACTCCATGGCCAAGTTGGTTAAG 1 chrXVI:810545-810823 ( 42) GACTCCATGGCCAAGTTGGTTAAG 1 chrIV:1175645-1176031 ( 41) GCTTCAGTAGCTCAGTAGGAAGAG 1 chrXV:976240-976641 ( 31) GCTTCAGTAGCTCAGTAGGAAGAG 1 chrXVI:435736-436124 ( 61) GCTCGTATGGCGCAGTGGTAGCGC 1 chrII:642895-643230 ( 43) GCTCGTATGGCGCAGTGGTAGCGC 1 chrX:390942-391042 ( 24) GCTTCAGTAGCTCAGTAGGAAGAG 1 chrIV:992658-993015 ( 46) GCGCAAGTGGTTTAGTGGTAAAAT 1 chrIII:142613-142937 ( 23) GCGCAAGTGGTTTAGTGGTAAAAT 1 chrVI:162062-162389 ( 53) GCGCAAGTGGTTTAGTGGTAAAAT 1 chrIV:83391-83784 ( 11) GCGCAAGTGGTTTAGTGGTAAAAT 1 chrXV:281991-282338 ( 50) GCGCAAGTGGTTTAGTGGTAAAAT 1 chrVII:845476-845868 ( 27) GCGCAAGTGGTTTAGTGGTAAAAT 1 chrXV:226509-226854 ( 27) GCGCAAGTGGTTTAGTGGTAAAAT 1 chrXVI:744118-744507 ( 22) GCCTCCTTAGCTTAGTGGTAGAGC 1 chrVII:661573-661930 ( 48) GCCTCCTTAGCTTAGTGGTAGAGC 1 chrVIII:466822-467146 ( 56) GCCTCCTTAGCTTAGTGGTAGAGC 1 chrV:492162-492592 ( 74) TTCCTCGTGGCCCAATGGTCACGG 1 chrXII:374180-374591 ( 20) TTCCTCGTGGCCCAATGGTCACGG 1 chrIV:619838-620205 ( 47) TTCCTCGTGGCCCAATGGTCACGG 1 chrXV:340185-340544 ( 34) TTCCTCGTGGCCCAATGGTCACGG 1 chrX:233740-233840 ( 50) TTCCTCGTGGCCCAATGGTCACGG 1 chrVII:736154-736568 ( 29) GCTCGCGTGGCGTAATGGCAACGC 1 chrXI:162319-162715 ( 68) GCTCGCGTGGCGTAATGGCAACGC 1 chrVII:828525-828972 ( 73) GCTCGCGTGGCGTAATGGCAACGC 1 chrVII:779441-779836 ( 28) GGGCGGTTAGTGTAGTGGTTATCA 1 chrXIII:808131-808508 ( 25) GGTCCTATAGTGTAGTGGTTATCA 1 chrIV:802599-802982 ( 39) GGTCCTATAGTGTAGTGGTTATCA 1 chrIV:644986-645390 ( 63) GGTCCTATAGTGTAGTGGTTATCA 1 chrVIII:134184-134528 ( 15) GGTCCTATAGTGTAGTGGTTATCA 1 chrX:538421-538521 ( 38) GTTCCGTTGGCGTAATGGTAACGC 1 chrV:130988-131347 ( 13) GGTTTTATAGTGTAGTGGTTATCA 1 chrXII:818457-818821 ( 20) GCTCCTCTAGTGCAATGGTTAGCA 1 chrIV:1075326-1075704 ( 56) GTTCCAATAGTGTAGCGGCTATCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCBYAGTKGKTARRG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 24 n= 42196 bayes= 7.54849 E= 1.3e-275 -1324 -1324 222 -157 -331 113 127 -190 -331 58 48 42 -173 123 -90 19 -65 30 30 10 -131 94 -32 19 -73 -422 86 56 -1324 -1324 -1324 170 -14 -1324 190 -1324 -1324 -1324 237 -1324 -1324 196 -1324 -31 -1324 130 42 -20 -209 106 -23 23 170 -1324 -1324 -1324 -99 -1324 213 -1324 -1324 -222 -1324 164 -331 -14 136 -4 -1324 -1324 237 -1324 -1324 -222 139 56 -50 -77 -142 96 106 -1324 -190 1 72 -77 68 -209 63 2 42 -209 -190 -106 192 -173 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCBYAGTKGKTARRG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 24 nsites= 97 E= 1.3e-275 0.000000 0.000000 0.896907 0.103093 0.030928 0.422680 0.463918 0.082474 0.030928 0.288660 0.268041 0.412371 0.092784 0.453608 0.103093 0.350515 0.195876 0.237113 0.237113 0.329897 0.123711 0.371134 0.154639 0.350515 0.185567 0.010309 0.350515 0.453608 0.000000 0.000000 0.000000 1.000000 0.278351 0.000000 0.721649 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.752577 0.000000 0.247423 0.000000 0.474227 0.257732 0.268041 0.072165 0.402062 0.164948 0.360825 1.000000 0.000000 0.000000 0.000000 0.154639 0.000000 0.845361 0.000000 0.000000 0.041237 0.000000 0.958763 0.030928 0.175258 0.494845 0.298969 0.000000 0.000000 1.000000 0.000000 0.000000 0.041237 0.505155 0.453608 0.216495 0.113402 0.072165 0.597938 0.639175 0.000000 0.051546 0.309278 0.505155 0.113402 0.309278 0.072165 0.474227 0.195876 0.257732 0.072165 0.082474 0.092784 0.731959 0.092784 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCBYAGTKGKTARRG MEME-1 regular expression -------------------------------------------------------------------------------- G[GC][TCG][CT][TCG][CT][TG]T[GA]G[CT][CTG][CT]AGT[GT]G[GT][TA][AT][AG][AG]G -------------------------------------------------------------------------------- Time 291.61 secs. ******************************************************************************** ******************************************************************************** MOTIF RAGRTCMBSGGTTCGATYCCS MEME-2 width = 21 sites = 71 llr = 1175 E-value = 7.9e-205 ******************************************************************************** -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGATYCCS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 36142:3:12::::2a2:::: pos.-specific C :12118554::::a::24a84 probability G 53651:2348a:::8:2:::4 matrix T 1:1:62131::aa:::46:21 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 **** * * Relative 1.4 * ******* * Entropy 1.2 * ******* ** (23.9 bits) 0.9 * ******* *** 0.7 * ** * ******* **** 0.5 **** *********** **** 0.2 **************** **** 0.0 --------------------- Multilevel GAGGTCCCGGGTTCGATTCCC consensus AG AA ATC A C G sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGATYCCS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123434-123815 - 13 2.45e-13 TAGGGTGCGG GAGGTCCCGGGTTCGAGTCCC GGCTCGCCCC chrI:166131-166514 + 37 2.55e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrXVI:856731-857128 + 65 5.19e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrVIII:146031-146466 - 54 5.19e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrX:197200-197300 - 30 5.19e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXII:656822-657165 - 1 5.19e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG chrVII:774177-774568 + 69 5.19e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXVI:819342-819753 + 75 9.04e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGA chrVII:738964-739339 + 64 9.04e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrIX:210478-210883 + 78 9.04e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CT chrIV:667834-668243 - 29 9.04e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrIX:183290-183697 - 7 9.04e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAG chrIV:83391-83784 + 51 4.56e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrXVI:860205-860666 + 34 4.56e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrVII:845476-845868 + 67 4.56e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrVII:779441-779836 + 69 5.30e-10 CTTCCAAGGT GGGGACACGGGTTCGATTCTC GTACCGCTCA chrVII:541679-542130 + 37 6.15e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrV:487219-487552 - 6 6.15e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTAT chrVII:328418-328846 + 42 6.15e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrXI:140782-141304 - 35 6.15e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrIV:802599-802982 - 1 6.15e-10 TTTTGATCCG GACAACCCCGGTTCGAATCCG chrIII:82363-82675 - 3 6.15e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CG chrIV:644986-645390 - 25 6.15e-10 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAGGACCT chrIX:197414-197805 + 74 6.15e-10 TTCTCACCGT GGAGACCGGGGTTCGACTCCC CGCTTC chrVIII:134184-134528 + 56 6.15e-10 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAGGACCT chrV:354754-355160 + 68 6.15e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrXV:980533-981038 + 22 7.12e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrXIV:567972-568480 + 11 7.12e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrV:135308-135638 - 12 1.21e-09 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrXIII:480516-480842 - 2 1.21e-09 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC C chrIV:1075326-1075704 - 17 1.38e-09 TCACACGGCA AAGGTCCCGAGTTCGATCCTC GGTTGGAACA chrXV:438483-438879 + 77 3.76e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTA chrVII:115335-115728 + 72 3.76e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAGG chrXV:113649-113981 + 79 4.25e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG A chrIII:295315-295810 + 14 4.25e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrII:266226-266590 + 62 4.25e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrIV:434134-434456 - 29 4.25e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrII:405690-406211 + 19 5.38e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:736154-736568 + 70 5.38e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrXI:162319-162715 - 30 5.38e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:355211-355311 + 12 5.38e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:828525-828972 - 35 5.38e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:412165-412538 - 3 6.78e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GG chrXIII:372345-372614 - 26 6.78e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXIII:420448-420818 - 15 6.78e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrVII:823327-823697 + 63 6.78e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrX:538421-538521 + 79 9.33e-09 TCCTAAGGAG AAGACTGCGGGTTCGAGTCCC G chrIV:488511-489051 - 76 1.04e-08 GGCG AAGATCCCGAGTTCGAACCTC GGTTGGATCA chrXII:818457-818821 + 61 5.39e-08 TTCCGGTGGC TGTGATCCGGGTTCGAGTCCC GGGAGGAGCT chrVII:440545-440990 - 9 5.88e-08 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCG chrII:36240-36632 + 72 5.88e-08 AAGTCATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCG chrV:492162-492592 - 35 9.77e-08 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrXII:374180-374591 + 62 9.77e-08 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrIV:619838-620205 - 8 9.77e-08 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGG chrXVI:55924-56454 - 40 1.15e-07 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrVI:137299-137716 - 39 1.69e-07 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrI:182430-182638 - 48 2.63e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrIV:437627-437964 + 78 2.63e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GC chrIV:980839-981200 - 15 2.63e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrII:226933-227316 + 52 2.63e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrXVI:744118-744507 + 63 3.02e-07 TTGTAATGCA AAGGTCGTTAGTTCAATTCTG ACAGGTGGCA chrXV:976240-976641 + 73 3.24e-07 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCCTGGA chrXV:288017-288582 + 1 3.48e-07 . GAGATCGGGCGTTCGACTCGC CCCCGGGAGA chrXVI:435736-436124 - 23 6.64e-07 TGCAAATCTG TTGGTCCTTAGTTCGATCCTG AGTGCGAGCT chrII:642895-643230 - 5 6.64e-07 TGCAAATCTG TTGGTCCTTAGTTCGATCCTG AGTG chrX:541388-541488 + 65 7.97e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrXIII:362909-363257 + 72 1.13e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGG chrVII:110461-110815 - 47 1.13e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrV:288188-288683 - 68 1.19e-06 GTTGGGCTCT GCCCGCGCTGGTTCAAATCCT GCTGGTGTCG chrXVI:689409-689843 + 40 1.19e-06 GTTGGGCTCT GCCCGCGCTGGTTCAAATCCT GCTGGTGTCG chrIII:149755-150117 + 75 1.19e-06 TCATAACCCT GATGTCCTCGGATCGAAACCG AGCGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGATYCCS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123434-123815 2.5e-13 12_[-2]_67 chrI:166131-166514 2.6e-11 36_[+2]_43 chrXVI:856731-857128 5.2e-11 64_[+2]_15 chrVIII:146031-146466 5.2e-11 53_[-2]_26 chrX:197200-197300 5.2e-11 29_[-2]_50 chrXII:656822-657165 5.2e-11 [-2]_79 chrVII:774177-774568 5.2e-11 68_[+2]_11 chrXVI:819342-819753 9e-11 74_[+2]_5 chrVII:738964-739339 9e-11 63_[+2]_16 chrIX:210478-210883 9e-11 77_[+2]_2 chrIV:667834-668243 9e-11 28_[-2]_51 chrIX:183290-183697 9e-11 6_[-2]_73 chrIV:83391-83784 4.6e-10 50_[+2]_29 chrXVI:860205-860666 4.6e-10 33_[+2]_46 chrVII:845476-845868 4.6e-10 66_[+2]_13 chrVII:779441-779836 5.3e-10 68_[+2]_11 chrVII:541679-542130 6.1e-10 36_[+2]_43 chrV:487219-487552 6.1e-10 5_[-2]_74 chrVII:328418-328846 6.1e-10 41_[+2]_38 chrXI:140782-141304 6.1e-10 34_[-2]_45 chrIV:802599-802982 6.1e-10 [-2]_79 chrIII:82363-82675 6.1e-10 2_[-2]_77 chrIV:644986-645390 6.1e-10 24_[-2]_55 chrIX:197414-197805 6.1e-10 73_[+2]_6 chrVIII:134184-134528 6.1e-10 55_[+2]_24 chrV:354754-355160 6.1e-10 67_[+2]_12 chrXV:980533-981038 7.1e-10 21_[+2]_58 chrXIV:567972-568480 7.1e-10 10_[+2]_69 chrV:135308-135638 1.2e-09 11_[-2]_68 chrXIII:480516-480842 1.2e-09 1_[-2]_78 chrIV:1075326-1075704 1.4e-09 16_[-2]_63 chrXV:438483-438879 3.8e-09 76_[+2]_3 chrVII:115335-115728 3.8e-09 71_[+2]_8 chrXV:113649-113981 4.2e-09 78_[+2]_1 chrIII:295315-295810 4.2e-09 13_[+2]_66 chrII:266226-266590 4.2e-09 61_[+2]_18 chrIV:434134-434456 4.2e-09 28_[-2]_51 chrII:405690-406211 5.4e-09 18_[+2]_61 chrVII:736154-736568 5.4e-09 69_[+2]_10 chrXI:162319-162715 5.4e-09 29_[-2]_50 chrX:355211-355311 5.4e-09 11_[+2]_68 chrVII:828525-828972 5.4e-09 34_[-2]_45 chrVII:412165-412538 6.8e-09 2_[-2]_77 chrXIII:372345-372614 6.8e-09 25_[-2]_54 chrXIII:420448-420818 6.8e-09 14_[-2]_65 chrVII:823327-823697 6.8e-09 62_[+2]_17 chrX:538421-538521 9.3e-09 78_[+2]_1 chrIV:488511-489051 1e-08 75_[-2]_4 chrXII:818457-818821 5.4e-08 60_[+2]_19 chrVII:440545-440990 5.9e-08 8_[-2]_71 chrII:36240-36632 5.9e-08 71_[+2]_8 chrV:492162-492592 9.8e-08 34_[-2]_45 chrXII:374180-374591 9.8e-08 61_[+2]_18 chrIV:619838-620205 9.8e-08 7_[-2]_72 chrXVI:55924-56454 1.1e-07 39_[-2]_40 chrVI:137299-137716 1.7e-07 38_[-2]_41 chrI:182430-182638 2.6e-07 47_[-2]_32 chrIV:437627-437964 2.6e-07 77_[+2]_2 chrIV:980839-981200 2.6e-07 14_[-2]_65 chrII:226933-227316 2.6e-07 51_[+2]_28 chrXVI:744118-744507 3e-07 62_[+2]_17 chrXV:976240-976641 3.2e-07 72_[+2]_7 chrXV:288017-288582 3.5e-07 [+2]_79 chrXVI:435736-436124 6.6e-07 22_[-2]_57 chrII:642895-643230 6.6e-07 4_[-2]_75 chrX:541388-541488 8e-07 64_[+2]_15 chrXIII:362909-363257 1.1e-06 71_[+2]_8 chrVII:110461-110815 1.1e-06 46_[-2]_33 chrV:288188-288683 1.2e-06 67_[-2]_12 chrXVI:689409-689843 1.2e-06 39_[+2]_40 chrIII:149755-150117 1.2e-06 74_[+2]_5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGATYCCS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RAGRTCMBSGGTTCGATYCCS width=21 seqs=71 chrIII:123434-123815 ( 13) GAGGTCCCGGGTTCGAGTCCC 1 chrI:166131-166514 ( 37) GAGGTCATCGGTTCGATTCCG 1 chrXVI:856731-857128 ( 65) GAGGTCTCCGGTTCGATTCCG 1 chrVIII:146031-146466 ( 54) GAGGTCTCCGGTTCGATTCCG 1 chrX:197200-197300 ( 30) GAGGTCTCCGGTTCGATTCCG 1 chrXII:656822-657165 ( 1) GAGGTCTCCGGTTCGATTCCG 1 chrVII:774177-774568 ( 69) GAGGTCTCCGGTTCGATTCCG 1 chrXVI:819342-819753 ( 75) GGGATCAGCGGTTCGATCCCG 1 chrVII:738964-739339 ( 64) GGGATCAGCGGTTCGATCCCG 1 chrIX:210478-210883 ( 78) GGGATCAGCGGTTCGATCCCG 1 chrIV:667834-668243 ( 29) GGGATCAGCGGTTCGATCCCG 1 chrIX:183290-183697 ( 7) GGGATCAGCGGTTCGATCCCG 1 chrIV:83391-83784 ( 51) TGGGCCCCCGGTTCGATTCCG 1 chrXVI:860205-860666 ( 34) TGGGCCCCCGGTTCGATTCCG 1 chrVII:845476-845868 ( 67) TGGGCCCCCGGTTCGATTCCG 1 chrVII:779441-779836 ( 69) GGGGACACGGGTTCGATTCTC 1 chrVII:541679-542130 ( 37) GGAGACCGGGGTTCGACTCCC 1 chrV:487219-487552 ( 6) GGAGACCGGGGTTCGACTCCC 1 chrVII:328418-328846 ( 42) GGAGACCGGGGTTCGACTCCC 1 chrXI:140782-141304 ( 35) GGAGACCGGGGTTCGACTCCC 1 chrIV:802599-802982 ( 1) GACAACCCCGGTTCGAATCCG 1 chrIII:82363-82675 ( 3) GGAGACCGGGGTTCGACTCCC 1 chrIV:644986-645390 ( 25) GACAACCCCGGTTCGAATCCG 1 chrIX:197414-197805 ( 74) GGAGACCGGGGTTCGACTCCC 1 chrVIII:134184-134528 ( 56) GACAACCCCGGTTCGAATCCG 1 chrV:354754-355160 ( 68) GGAGACCGGGGTTCGACTCCC 1 chrXV:980533-981038 ( 22) GAGGCCCTGGGTTCAATTCCC 1 chrXIV:567972-568480 ( 11) GAGGCCCTGGGTTCAATTCCC 1 chrV:135308-135638 ( 12) AAGGTTAGGGGTTCGAGCCCC 1 chrXIII:480516-480842 ( 2) AAGGTTAGGGGTTCGAGCCCC 1 chrIV:1075326-1075704 ( 17) AAGGTCCCGAGTTCGATCCTC 1 chrXV:438483-438879 ( 77) AATGTCAGGGGTTCGAGCCCC 1 chrVII:115335-115728 ( 72) AATGTCAGGGGTTCGAGCCCC 1 chrXV:113649-113981 ( 79) GAGATCATCGGTTCAAATCCG 1 chrIII:295315-295810 ( 14) GAGATCATCGGTTCAAATCCG 1 chrII:266226-266590 ( 62) GAGATCATCGGTTCAAATCCG 1 chrIV:434134-434456 ( 29) GAGATCATCGGTTCAAATCCG 1 chrII:405690-406211 ( 19) AAGATTATGGGTTCGACCCCC 1 chrVII:736154-736568 ( 70) AAGATTATGGGTTCGACCCCC 1 chrXI:162319-162715 ( 30) AAGATTATGGGTTCGACCCCC 1 chrX:355211-355311 ( 12) AAGATTATGGGTTCGACCCCC 1 chrVII:828525-828972 ( 35) AAGATTATGGGTTCGACCCCC 1 chrVII:412165-412538 ( 3) AACGTCCCCAGTTCGATCCTG 1 chrXIII:372345-372614 ( 26) AACGTCCCCAGTTCGATCCTG 1 chrXIII:420448-420818 ( 15) AACGTCCCCAGTTCGATCCTG 1 chrVII:823327-823697 ( 63) AACGTCCCCAGTTCGATCCTG 1 chrX:538421-538521 ( 79) AAGACTGCGGGTTCGAGTCCC 1 chrIV:488511-489051 ( 76) AAGATCCCGAGTTCGAACCTC 1 chrXII:818457-818821 ( 61) TGTGATCCGGGTTCGAGTCCC 1 chrVII:440545-440990 ( 9) GAGGTCCTGTGTTCGATCCAC 1 chrII:36240-36632 ( 72) GAGGTCCTGTGTTCGATCCAC 1 chrV:492162-492592 ( 35) AAGATTCCAGGTTCAAGTCCT 1 chrXII:374180-374591 ( 62) AAGATTCCAGGTTCAAGTCCT 1 chrIV:619838-620205 ( 8) AAGATTCCAGGTTCAAGTCCT 1 chrXVI:55924-56454 ( 40) AGGGTTGCAGGTTCAATTCCT 1 chrVI:137299-137716 ( 39) AAGATCGTGAGTTCAACCCTC 1 chrI:182430-182638 ( 48) GCCCGCGCAGGTTCGAGTCCT 1 chrIV:437627-437964 ( 78) GCCCGCGCAGGTTCGAGTCCT 1 chrIV:980839-981200 ( 15) GCCCGCGCAGGTTCGAGTCCT 1 chrII:226933-227316 ( 52) GCCCGCGCAGGTTCGAGTCCT 1 chrXVI:744118-744507 ( 63) AAGGTCGTTAGTTCAATTCTG 1 chrXV:976240-976641 ( 73) AAGGTCGAGAGTTCGAACCTC 1 chrXV:288017-288582 ( 1) GAGATCGGGCGTTCGACTCGC 1 chrXVI:435736-436124 ( 23) TTGGTCCTTAGTTCGATCCTG 1 chrII:642895-643230 ( 5) TTGGTCCTTAGTTCGATCCTG 1 chrX:541388-541488 ( 65) CCAGATCGGGGTTCAATTCCC 1 chrXIII:362909-363257 ( 72) TGAAACCCTGGTTCGATTCTA 1 chrVII:110461-110815 ( 47) TGAAACCCTGGTTCGATTCTA 1 chrV:288188-288683 ( 68) GCCCGCGCTGGTTCAAATCCT 1 chrXVI:689409-689843 ( 40) GCCCGCGCTGGTTCAAATCCT 1 chrIII:149755-150117 ( 75) GATGTCCTCGGATCGAAACCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGATYCCS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 43840 bayes= 10.104 E= 7.9e-205 8 -377 151 -145 95 -97 55 -344 -112 -7 168 -245 25 -119 151 -1279 -54 -119 -119 101 -1279 206 -1279 -64 -13 131 -19 -212 -444 127 39 -20 -145 93 113 -164 -99 -377 206 -344 -1279 -1279 237 -1279 -444 -1279 -1279 168 -1279 -1279 -1279 170 -1279 237 -1279 -1279 -54 -1279 203 -1279 170 -1279 -1279 -1279 -86 3 3 51 -444 93 -1279 101 -1279 237 -1279 -1279 -344 198 -377 -64 -344 113 108 -112 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGATYCCS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 71 E= 7.9e-205 0.323944 0.014085 0.549296 0.112676 0.591549 0.098592 0.281690 0.028169 0.140845 0.183099 0.619718 0.056338 0.366197 0.084507 0.549296 0.000000 0.211268 0.084507 0.084507 0.619718 0.000000 0.802817 0.000000 0.197183 0.281690 0.478873 0.169014 0.070423 0.014085 0.464789 0.253521 0.267606 0.112676 0.366197 0.422535 0.098592 0.154930 0.014085 0.802817 0.028169 0.000000 0.000000 1.000000 0.000000 0.014085 0.000000 0.000000 0.985915 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.211268 0.000000 0.788732 0.000000 1.000000 0.000000 0.000000 0.000000 0.169014 0.197183 0.197183 0.436620 0.014085 0.366197 0.000000 0.619718 0.000000 1.000000 0.000000 0.000000 0.028169 0.760563 0.014085 0.197183 0.028169 0.422535 0.408451 0.140845 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGATYCCS MEME-2 regular expression -------------------------------------------------------------------------------- [GA][AG]G[GA][TA]C[CA][CTG][GC]GGTTC[GA]AT[TC]CC[CG] -------------------------------------------------------------------------------- Time 553.31 secs. ******************************************************************************** ******************************************************************************** MOTIF ACGGTGAAAGCGTGATGTGATAGCCGTTAC MEME-3 width = 30 sites = 11 llr = 460 E-value = 1.0e-096 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACGGTGAAAGCGTGATGTGATAGCCGTTAC MEME-3 Description -------------------------------------------------------------------------------- Simplified A a:::::a9a1::::a::::a:a::::::a: pos.-specific C :a::::::::a::::::::::::aa::::a probability G ::aa:a:1:9:a:a::a:a:::a::a:::: matrix T ::::a:::::::a::a:a::a:::::aa:: bits 2.4 *** * ** * * * **** * 2.1 *** * ** * * * **** * 1.9 *** * *** * * * **** * 1.7 ******* ********************** Relative 1.4 ****************************** Entropy 1.2 ****************************** (60.3 bits) 0.9 ****************************** 0.7 ****************************** 0.5 ****************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel ACGGTGAAAGCGTGATGTGATAGCCGTTAC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGGTGAAAGCGTGATGTGATAGCCGTTAC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrVII:541679-542130 - 7 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATA chrV:487219-487552 + 27 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrXIII:290630-290993 - 51 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrXII:796992-797367 - 60 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrVII:328418-328846 - 12 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrXI:140782-141304 + 56 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrIII:82363-82675 + 24 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrIX:370231-370606 - 60 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrV:354754-355160 - 38 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrXVI:210082-210430 + 17 3.89e-19 CCCGGTCTCC ACGGTGAAAGCGTGATGTGATAGCCGTTAC ACTATATCGG chrIX:197414-197805 - 44 1.64e-18 CCCGGTCTCC ACGGTGAGAACGTGATGTGATAGCCGTTAC ACTACATCGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGGTGAAAGCGTGATGTGATAGCCGTTAC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:541679-542130 3.9e-19 6_[-3]_64 chrV:487219-487552 3.9e-19 26_[+3]_44 chrXIII:290630-290993 3.9e-19 50_[-3]_20 chrXII:796992-797367 3.9e-19 59_[-3]_11 chrVII:328418-328846 3.9e-19 11_[-3]_59 chrXI:140782-141304 3.9e-19 55_[+3]_15 chrIII:82363-82675 3.9e-19 23_[+3]_47 chrIX:370231-370606 3.9e-19 59_[-3]_11 chrV:354754-355160 3.9e-19 37_[-3]_33 chrXVI:210082-210430 3.9e-19 16_[+3]_54 chrIX:197414-197805 1.6e-18 43_[-3]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGGTGAAAGCGTGATGTGATAGCCGTTAC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACGGTGAAAGCGTGATGTGATAGCCGTTAC width=30 seqs=11 chrVII:541679-542130 ( 7) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrV:487219-487552 ( 27) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrXIII:290630-290993 ( 51) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrXII:796992-797367 ( 60) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrVII:328418-328846 ( 12) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrXI:140782-141304 ( 56) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrIII:82363-82675 ( 24) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrIX:370231-370606 ( 60) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrV:354754-355160 ( 38) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrXVI:210082-210430 ( 17) ACGGTGAAAGCGTGATGTGATAGCCGTTAC 1 chrIX:197414-197805 ( 44) ACGGTGAGAACGTGATGTGATAGCCGTTAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGGTGAAAGCGTGATGTGATAGCCGTTAC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 38908 bayes= 12.1431 E= 1.0e-096 170 -1010 -1010 -1010 -1010 237 -1010 -1010 -1010 -1010 237 -1010 -1010 -1010 237 -1010 -1010 -1010 -1010 170 -1010 -1010 237 -1010 170 -1010 -1010 -1010 156 -1010 -108 -1010 170 -1010 -1010 -1010 -175 -1010 224 -1010 -1010 237 -1010 -1010 -1010 -1010 237 -1010 -1010 -1010 -1010 170 -1010 -1010 237 -1010 170 -1010 -1010 -1010 -1010 -1010 -1010 170 -1010 -1010 237 -1010 -1010 -1010 -1010 170 -1010 -1010 237 -1010 170 -1010 -1010 -1010 -1010 -1010 -1010 170 170 -1010 -1010 -1010 -1010 -1010 237 -1010 -1010 237 -1010 -1010 -1010 237 -1010 -1010 -1010 -1010 237 -1010 -1010 -1010 -1010 170 -1010 -1010 -1010 170 170 -1010 -1010 -1010 -1010 237 -1010 -1010 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGGTGAAAGCGTGATGTGATAGCCGTTAC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 11 E= 1.0e-096 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.909091 0.000000 0.090909 0.000000 1.000000 0.000000 0.000000 0.000000 0.090909 0.000000 0.909091 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGGTGAAAGCGTGATGTGATAGCCGTTAC MEME-3 regular expression -------------------------------------------------------------------------------- ACGGTGAAAGCGTGATGTGATAGCCGTTAC -------------------------------------------------------------------------------- Time 804.07 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:722259-722359 6.28e-01 100 chrXIII:510889-511211 7.62e-01 100 chrII:409967-410403 5.38e-01 100 chrXV:671072-671388 5.65e-01 100 chrXIII:761817-762104 1.32e-01 54_[-1(7.47e-05)]_22 chrIX:316183-316573 3.62e-01 100 chrVII:823327-823697 9.05e-11 19_[+1(1.13e-08)]_19_[+2(6.78e-09)]_\ 17 chrVIII:381437-382097 9.63e-01 100 chrXIV:494067-494294 2.14e-01 100 chrV:117755-118258 6.37e-01 100 chrXIV:569765-570100 1.06e-07 34_[-1(7.05e-12)]_42 chrVII:557689-557930 1.38e-01 100 chrX:390942-391042 1.80e-04 23_[-1(9.22e-08)]_53 chrXV:288017-288582 8.81e-04 [+2(3.48e-07)]_79 chrXIII:500450-500559 5.44e-01 100 chrXV:226509-226854 1.85e-04 26_[-1(1.45e-07)]_50 chrVII:437132-437358 9.58e-01 100 chrXIII:420448-420818 9.05e-11 14_[-2(6.78e-09)]_19_[-1(1.13e-08)]_\ 22 chrVIII:147614-147806 7.85e-01 100 chrV:311352-311707 1.18e-01 100 chrXII:645935-646090 4.51e-01 100 chrIX:183290-183697 1.07e-14 6_[-2(9.04e-11)]_19_[-1(7.05e-12)]_\ 30 chrVII:254148-254524 3.49e-01 100 chrVIII:34832-35235 9.04e-02 100 chrXII:232020-234251 6.54e-01 100 chrVII:323778-324107 8.06e-01 100 chrXIV:350187-350623 3.97e-02 20_[+1(9.52e-05)]_56 chrV:396968-397346 1.27e-01 100 chrXVI:810545-810823 1.10e-04 41_[+1(7.64e-08)]_35 chrII:374722-375158 2.83e-02 100 chrV:77497-78436 7.93e-02 100 chrVII:845476-845868 1.05e-10 26_[+1(1.45e-07)]_16_[+2(4.56e-10)]_\ 13 chrXII:637152-637840 1.63e-01 100 chrXII:781486-781825 4.52e-01 100 chrVII:774177-774568 4.43e-14 26_[+1(6.56e-11)]_18_[+2(5.19e-11)]_\ 11 chrXVI:579720-580156 8.55e-01 100 chrI:166131-166514 4.45e-07 36_[+2(2.55e-11)]_43 chrXII:930792-930950 5.63e-01 100 chrVIII:505843-506149 9.87e-01 100 chrXV:254423-254593 3.19e-01 100 chrVII:702943-703209 8.99e-01 100 chrXV:908639-908848 7.88e-02 100 chrXV:92950-93353 2.15e-01 100 chrXIII:754463-754725 8.51e-01 100 chrXII:837797-839016 3.82e-01 100 chrVIII:55970-56406 3.59e-01 100 chrIII:124454-124890 9.63e-01 100 chrXII:1018330-1018446 3.19e-01 100 chrIV:434134-434456 5.66e-11 28_[-2(4.25e-09)]_18_[-1(3.21e-09)]_\ 9 chrXV:444800-446118 8.48e-01 100 chrXV:869846-870282 9.96e-01 100 chrV:551180-551512 1.15e-07 38_[-1(7.05e-12)]_38 chrVIII:124078-124514 3.54e-01 100 chrXIII:372345-372614 9.05e-11 25_[-2(6.78e-09)]_19_[-1(1.13e-08)]_\ 11 chrIV:1080351-1080840 5.60e-01 100 chrXI:364785-365043 9.25e-01 100 chrXIII:480516-480842 5.83e-11 1_[-2(1.21e-09)]_18_[-1(5.41e-09)]_\ 36 chrXVI:452015-452451 2.73e-01 100 chrII:642895-643230 3.01e-07 4_[-2(6.64e-07)]_17_[-1(9.22e-08)]_\ 34 chrXIV:241447-241675 1.21e-02 55_[-3(7.92e-05)]_15 chrVIII:451266-452955 2.89e-01 100 chrV:51959-52189 8.79e-01 100 chrII:556070-556240 7.30e-01 100 chrXIII:352096-352438 3.74e-05 62_[+1(3.44e-08)]_14 chrVI:210494-210874 6.18e-02 49_[-1(8.29e-05)]_27 chrVII:648992-649298 8.89e-01 100 chrII:414786-415222 8.76e-01 100 chrXI:551983-552419 4.38e-01 100 chrIX:317007-317243 9.94e-01 100 chrXI:431327-431632 7.92e-01 100 chrXIV:585703-586467 1.49e-01 100 chrVII:317077-317303 9.73e-01 100 chrXIII:696525-696777 9.97e-01 100 chrXII:499370-499630 8.07e-01 100 chrX:617734-617834 1.67e-05 44_[+1(1.38e-09)]_32 chrVII:828525-828972 6.92e-09 34_[-2(5.38e-09)]_17_[-1(2.04e-07)]_\ 4 chrI:71938-73176 8.09e-02 78_[-2(6.10e-05)]_1 chrIII:227785-228171 1.35e-05 13_[+1(1.60e-09)]_63 chrXVI:303630-303993 8.40e-01 100 chrV:69056-69383 4.13e-01 100 chrIX:127008-128096 7.19e-01 100 chrIV:579555-580419 6.96e-02 46_[-1(3.02e-05)]_30 chrXV:159263-160165 8.15e-01 100 chrXII:201779-202356 3.42e-01 100 chrVII:310831-312105 1.88e-01 100 chrXII:253963-254137 9.80e-01 100 chrXII:953327-953472 1.31e-01 100 chrVII:345864-346627 2.35e-01 100 chrVII:115335-115728 1.08e-09 6_[+1(3.44e-08)]_41_[+2(3.76e-09)]_\ 8 chrX:73454-73554 3.59e-01 100 chrIX:23931-24367 7.53e-02 100 chrXII:833575-833871 8.90e-01 100 chrXIII:220493-220929 1.84e-01 100 chrXI:245671-246050 1.11e-01 100 chrXII:1025197-1025633 7.10e-02 100 chrIV:411281-411612 1.44e-01 64_[-1(9.52e-05)]_12 chrXV:867715-868091 3.28e-01 100 chrXII:639754-640286 9.96e-01 100 chrXII:656822-657165 4.43e-14 [-2(5.19e-11)]_18_[-1(6.56e-11)]_37 chrVIII:266210-266419 3.40e-01 100 chrXV:253881-254065 8.98e-01 100 chrV:362804-363240 9.76e-01 100 chrIV:1359437-1359787 5.77e-01 100 chrX:197200-197300 1.98e-14 29_[-2(5.19e-11)]_18_[-1(6.56e-11)]_\ 8 chrXII:875207-875603 3.50e-04 20_[+1(3.44e-08)]_56 chrXV:409540-409976 8.09e-01 100 chrXI:520112-520548 4.17e-01 100 chrXVI:376907-377343 8.91e-01 100 chrIV:1075326-1075704 2.96e-12 16_[-2(1.38e-09)]_1_[+3(6.46e-08)]_\ 32 chrV:130988-131347 2.94e-03 12_[-1(9.69e-07)]_64 chrVI:226585-226912 5.36e-05 38_[-1(5.41e-09)]_38 chrIV:794359-795010 9.77e-01 100 chrII:563709-564145 5.07e-01 100 chrV:423990-424138 3.20e-01 100 chrVI:64204-64425 7.23e-01 100 chrII:408509-409020 1.81e-01 100 chrXIII:288244-288680 1.68e-01 100 chrX:538421-538521 2.47e-08 37_[+1(5.21e-07)]_17_[+2(9.33e-09)]_\ 1 chrV:101011-101447 1.71e-01 100 chrIII:123434-123815 1.04e-11 12_[-2(2.45e-13)]_17_[-1(1.14e-05)]_\ 26 chrII:191965-192401 9.81e-01 100 chrII:87924-88588 8.95e-01 100 chrVII:481415-482896 2.06e-01 100 chrIV:232261-232504 4.94e-01 100 chrV:287308-287744 1.96e-01 100 chrXVI:921053-921385 6.16e-01 100 chrVII:366091-366762 5.24e-01 100 chrXIV:715930-716522 9.92e-01 100 chrIX:255324-255667 6.71e-01 100 chrV:61146-61551 6.58e-01 100 chrXIII:661487-662193 9.60e-02 100 chrXI:163870-164306 1.25e-01 100 chrIV:929394-929830 2.64e-01 100 chrXIV:63146-63536 8.12e-01 100 chrIV:884215-884594 1.91e-07 6_[+1(1.41e-10)]_70 chrVII:545352-545486 5.54e-01 100 chrVIII:466822-467146 3.79e-04 55_[+1(1.72e-07)]_21 chrXII:1002452-1002622 2.77e-01 100 chrII:407551-407976 9.84e-01 100 chrIX:254273-254511 4.83e-01 100 chrIV:1301777-1302213 7.94e-01 100 chrXVI:210082-210430 1.57e-16 16_[+3(3.89e-19)]_54 chrVIII:105283-105591 9.41e-01 100 chrXII:198958-199734 7.89e-01 100 chrII:563588-563774 6.46e-01 100 chrV:438555-438866 5.49e-06 39_[+1(1.13e-08)]_37 chrXVI:282388-282569 2.52e-01 100 chrXI:430676-431112 8.08e-01 100 chrII:45055-45322 7.48e-01 100 chrIII:149755-150117 5.73e-04 74_[+2(1.19e-06)]_5 chrV:135308-135638 5.83e-11 11_[-2(1.21e-09)]_18_[-1(5.41e-09)]_\ 26 chrVII:882432-883400 5.35e-01 100 chrII:36240-36632 1.35e-08 11_[+1(3.44e-08)]_36_[+2(5.88e-08)]_\ 8 chrV:354754-355160 7.29e-23 37_[-3(3.89e-19)]_[+2(6.15e-10)]_12 chrII:604164-604428 8.70e-01 100 chrXIV:575251-575687 2.82e-01 100 chrXVI:689409-689843 3.03e-03 39_[+2(1.19e-06)]_40 chrVIII:146031-146466 2.39e-07 53_[-2(5.19e-11)]_26 chrII:266226-266590 5.66e-11 19_[+1(3.21e-09)]_18_[+2(4.25e-09)]_\ 18 chrXVI:242705-243512 3.22e-01 100 chrVII:727711-727846 9.12e-01 100 chrX:233740-233840 4.63e-04 49_[+1(1.88e-07)]_27 chrXV:424198-424691 8.77e-01 100 chrIV:1269013-1269449 9.53e-01 100 chrX:663634-663734 6.46e-01 100 chrXIV:106982-107500 1.68e-01 100 chrXIII:222591-223027 3.17e-01 100 chrIV:1402724-1403307 5.37e-01 100 chrXIV:663977-664413 8.43e-01 100 chrXVI:280633-281841 1.49e-02 24_[+1(2.27e-05)]_52 chrXI:163668-163853 5.35e-01 100 chrXIII:296822-298835 7.13e-01 100 chrX:355211-355311 1.33e-07 11_[+2(5.38e-09)]_20_[+1(9.90e-06)]_\ 24 chrXI:334400-334603 5.93e-01 100 chrXII:731960-732271 3.82e-06 24_[+1(1.38e-09)]_52 chrXIII:652068-652936 4.45e-01 100 chrI:180953-181421 2.67e-04 3_[+1(2.50e-08)]_73 chrXII:568090-568323 4.66e-01 100 chrXI:517740-518228 6.98e-07 53_[+1(6.56e-11)]_23 chrXVI:576065-576305 9.86e-01 100 chrII:167968-168192 6.44e-01 100 chrII:372984-373250 5.85e-01 100 chrIV:308056-308339 7.58e-01 100 chrV:363742-363864 8.02e-01 100 chrIII:295315-295810 2.93e-05 13_[+2(4.25e-09)]_66 chrXI:104936-105372 6.87e-01 100 chrXV:678882-679154 7.82e-01 100 chrII:236519-236955 8.45e-01 100 chrVIII:237742-238118 1.13e-05 35_[-1(3.44e-08)]_41 chrV:284896-285233 6.09e-01 100 chrXV:253157-253409 7.19e-01 100 chrX:120485-120585 2.78e-01 100 chrXV:1028695-1029075 8.35e-01 100 chrVII:506777-507213 4.79e-01 100 chrVIII:134184-134528 9.44e-12 14_[+1(5.21e-07)]_17_[+2(6.15e-10)]_\ 24 chrXIV:87213-87793 5.12e-01 100 chrII:477065-477601 6.92e-01 100 chrXII:348291-348535 8.95e-01 100 chrXV:903891-904799 3.29e-01 100 chrII:256418-256854 3.06e-01 100 chrVI:64374-64810 8.82e-01 100 chrXV:385361-385492 5.77e-01 100 chrXV:978703-979124 4.64e-01 100 chrV:399182-399579 5.18e-01 100 chrXIV:65164-65600 8.38e-01 100 chrXIII:301739-302175 3.12e-01 100 chrXVI:75034-75505 4.77e-01 100 chrXIII:20855-21291 2.23e-01 100 chrXII:789792-790228 6.75e-01 100 chrXIV:567972-568480 8.27e-06 10_[+2(7.12e-10)]_69 chrXII:366083-366464 9.03e-02 100 chrX:531663-531763 1.15e-01 100 chrIII:107375-107679 9.77e-01 100 chrXIII:119291-119459 7.23e-01 100 chrV:61547-62109 8.23e-01 100 chrXII:368254-368471 3.50e-01 100 chrIX:197414-197805 2.13e-22 43_[-3(1.64e-18)]_[+2(6.15e-10)]_6 chrXI:432223-432470 4.17e-01 100 chrXIII:22944-23403 5.38e-01 100 chrV:143159-143595 3.53e-02 16_[-1(4.62e-05)]_60 chrVII:857274-857625 2.97e-04 68_[-1(2.50e-08)]_8 chrXIII:279982-280136 6.80e-03 49_[-1(1.06e-05)]_27 chrXI:162319-162715 6.92e-09 29_[-2(5.38e-09)]_17_[-1(2.04e-07)]_\ 9 chrXVI:795120-795283 8.35e-01 100 chrIV:1490036-1490460 7.20e-01 100 chrI:68355-68540 4.56e-01 100 chrX:745068-745168 6.52e-01 100 chrVII:439097-439821 2.97e-01 100 chrXVI:585869-586076 2.59e-01 100 chrVI:221781-222019 6.76e-01 100 chrXV:438483-438879 1.08e-09 11_[+1(3.44e-08)]_41_[+2(3.76e-09)]_\ 3 chrXV:340185-340544 2.41e-04 33_[-1(1.88e-07)]_43 chrXVI:860205-860666 9.70e-07 33_[+2(4.56e-10)]_46 chrXV:989091-989452 5.92e-04 29_[-1(7.94e-07)]_47 chrXVI:450003-450439 3.39e-03 45_[+3(1.41e-05)]_25 chrXI:74435-74800 6.47e-04 56_[+1(7.64e-08)]_20 chrXII:710653-710851 6.96e-01 100 chrXIII:302833-303029 4.57e-01 100 chrXII:300325-300736 5.12e-01 100 chrX:606317-606417 5.60e-01 100 chrXV:281991-282338 1.85e-04 49_[+1(1.45e-07)]_27 chrII:83126-83562 9.47e-01 100 chrIX:212777-213213 8.13e-01 100 chrIV:117212-117558 6.95e-01 100 chrIV:44116-44552 1.74e-01 100 chrXIV:414446-414882 8.91e-01 100 chrII:197335-197637 1.86e-07 57_[+1(7.05e-12)]_19 chrIV:1360232-1360668 5.95e-02 100 chrVII:661573-661930 1.26e-05 47_[+1(1.72e-07)]_29 chrXII:603623-604019 1.26e-01 100 chrXIII:162036-162540 2.34e-02 19_[+2(8.52e-05)]_60 chrXII:922153-922526 9.85e-01 100 chrXII:1012173-1012311 1.49e-02 100 chrXII:819356-819792 3.70e-01 100 chrXVI:795219-795655 1.03e-01 100 chrXV:877787-878008 3.05e-01 100 chrII:226933-227316 9.10e-10 [+1(5.53e-10)]_27_[+2(2.63e-07)]_28 chrX:79357-79457 9.68e-01 100 chrXII:566426-566692 2.76e-01 100 chrXIII:118471-118907 3.09e-01 100 chrIX:370231-370606 2.65e-16 59_[-3(3.89e-19)]_11 chrVIII:125938-126281 4.11e-01 100 chrXVI:622383-622820 4.07e-04 56_[-1(3.44e-08)]_20 chrXII:498553-498819 7.59e-01 100 chrXII:924472-924690 9.05e-01 100 chrX:156500-156600 5.27e-02 100 chrX:156716-156816 9.79e-01 100 chrX:204542-204642 3.06e-02 39_[+1(9.90e-06)]_37 chrXIII:732071-732363 9.32e-01 100 chrVII:289282-289718 6.95e-01 100 chrVII:736154-736568 6.92e-09 28_[+1(2.04e-07)]_17_[+2(5.38e-09)]_\ 10 chrX:651320-651420 6.22e-01 100 chrX:123094-123194 1.16e-01 100 chrIV:83391-83784 1.05e-10 10_[+1(1.45e-07)]_16_[+2(4.56e-10)]_\ 29 chrXVI:744118-744507 7.62e-09 21_[+1(1.72e-07)]_17_[+2(3.02e-07)]_\ 17 chrV:469298-469607 2.58e-05 54_[+1(1.13e-08)]_22 chrXVI:856731-857128 1.83e-14 22_[+1(6.56e-11)]_18_[+2(5.19e-11)]_\ 15 chrXV:216285-216664 7.11e-01 100 chrIV:619838-620205 9.34e-08 7_[-2(9.77e-08)]_18_[-1(1.88e-07)]_\ 30 chrXII:734656-734960 1.37e-07 43_[+1(7.05e-12)]_33 chrIV:644986-645390 9.44e-12 24_[-2(6.15e-10)]_17_[-1(5.21e-07)]_\ 14 chrVIII:504999-505435 2.01e-01 100 chrXII:515846-515976 9.26e-01 100 chrIV:835806-836139 4.56e-01 100 chrXVI:76381-76698 8.47e-01 100 chrVIII:175076-175385 3.58e-01 100 chrVI:95509-95821 3.96e-01 100 chrXII:65459-65703 2.72e-01 100 chrIV:667834-668243 6.27e-15 28_[-2(9.04e-11)]_19_[-1(7.05e-12)]_\ 8 chrXVI:718419-719157 4.86e-01 100 chrX:76307-76407 4.07e-01 100 chrV:174787-175018 9.13e-01 100 chrII:405690-406211 1.33e-07 18_[+2(5.38e-09)]_20_[+1(9.90e-06)]_\ 17 chrVII:876221-876551 3.52e-05 57_[+1(5.41e-09)]_19 chrXVI:435736-436124 3.01e-07 22_[-2(6.64e-07)]_17_[-1(9.22e-08)]_\ 16 chrIV:130028-130318 9.60e-01 100 chrVII:110461-110815 3.01e-04 46_[-2(1.13e-06)]_33 chrXII:499099-499437 5.43e-01 100 chrIII:82363-82675 7.29e-23 2_[-2(6.15e-10)]_[+3(3.89e-19)]_47 chrIII:177262-177667 2.26e-01 100 chrXII:243053-243489 8.14e-01 100 chrII:88940-89376 9.88e-01 100 chrX:76041-76141 7.26e-01 100 chrXIII:590115-590347 6.04e-01 100 chrXI:334613-334825 3.04e-01 100 chrVII:518663-519099 8.26e-01 100 chrIX:248667-249046 3.61e-06 43_[+1(1.60e-09)]_33 chrVIII:35641-35916 2.55e-01 100 chrIX:98879-99038 2.89e-01 100 chrXI:557020-557456 7.70e-01 100 chrII:606367-606803 7.36e-01 100 chrX:703289-703389 9.85e-01 100 chrII:406722-407158 6.08e-01 100 chrXIII:259046-259392 7.03e-06 46_[-1(5.53e-10)]_30 chrVII:779441-779836 4.98e-13 27_[+1(3.58e-07)]_17_[+2(5.30e-10)]_\ 11 chrXIV:442851-443277 1.45e-01 74_[+2(7.71e-05)]_5 chrXV:900162-900598 8.25e-01 100 chrXV:589599-590035 5.33e-01 100 chrV:431042-431518 1.65e-01 100 chrXIV:102526-103125 4.24e-01 100 chrII:333823-334329 2.15e-01 100 chrXVI:173032-173329 9.93e-01 100 chrXII:636933-637231 3.22e-01 100 chrVII:914887-915180 8.81e-01 100 chrVII:574816-575231 4.94e-01 100 chrIV:125187-125623 4.75e-01 100 chrXII:262889-263336 8.78e-01 100 chrIV:980839-981200 9.10e-10 14_[-2(2.63e-07)]_27_[-1(5.53e-10)]_\ 14 chrX:607181-607281 4.42e-01 100 chrX:354032-354132 1.45e-01 41_[+1(8.29e-05)]_35 chrIV:234124-234693 3.43e-01 100 chrXV:976240-976641 1.38e-07 30_[+1(9.22e-08)]_18_[+2(3.24e-07)]_\ 7 chrV:311713-312276 5.16e-01 100 chrXII:950076-950556 9.55e-01 100 chrXIV:68246-68682 8.57e-01 100 chrVII:148512-148695 9.45e-01 100 chrV:138482-139090 7.86e-01 100 chrIV:802599-802982 9.44e-12 [-2(6.15e-10)]_17_[-1(5.21e-07)]_38 chrIV:490667-491103 5.38e-01 100 chrXI:261513-262191 4.31e-02 8_[+1(6.73e-05)]_68 chrVI:223381-223520 6.78e-01 100 chrXIV:104621-105183 7.67e-01 100 chrIX:191079-191515 1.76e-02 19_[-3(5.81e-05)]_51 chrXII:838814-839250 6.05e-01 100 chrXV:912330-912642 8.64e-01 100 chrXV:742241-742543 9.75e-01 100 chrXI:101121-101557 9.81e-02 100 chrI:143179-143615 8.97e-01 100 chrIX:189848-190210 9.89e-01 100 chrVI:75545-75981 5.17e-03 100 chrXV:961061-961497 6.13e-01 100 chrVII:987041-987477 5.91e-01 100 chrXV:779725-780976 5.42e-01 100 chrXII:628201-628636 1.56e-04 14_[+1(2.50e-08)]_62 chrXIV:303295-303550 8.55e-01 100 chrX:227748-227848 9.37e-01 100 chrX:68982-69082 8.42e-01 100 chrVII:438624-438868 3.81e-01 100 chrXVI:645376-645715 5.20e-01 100 chrV:85763-86801 9.97e-01 100 chrXIII:742790-743140 1.79e-01 100 chrV:288188-288683 2.48e-03 67_[-2(1.19e-06)]_12 chrX:58977-59077 3.99e-05 23_[-1(3.21e-09)]_53 chrII:82254-82690 5.87e-01 100 chrVIII:201648-202084 5.61e-01 100 chrIX:210478-210883 1.07e-14 34_[+1(7.05e-12)]_19_[+2(9.04e-11)]_\ 2 chrXVI:829104-829322 1.85e-01 100 chrXV:168016-168400 3.90e-02 30_[+2(9.72e-05)]_49 chrIV:358125-358355 9.23e-01 100 chrXVI:404924-405721 8.01e-01 100 chrI:141637-141908 9.38e-01 100 chrXII:369307-370334 5.79e-01 100 chrIV:1305451-1305816 5.67e-06 46_[+1(5.53e-10)]_30 chrIV:491582-492018 1.64e-01 100 chrXI:140782-141304 7.29e-23 34_[-2(6.15e-10)]_[+3(3.89e-19)]_15 chrXII:713180-713530 9.21e-01 100 chrVII:825678-826114 5.72e-01 100 chrVII:328418-328846 7.29e-23 11_[-3(3.89e-19)]_[+2(6.15e-10)]_38 chrV:78954-79390 3.34e-02 100 chrIV:1300977-1301264 7.39e-01 100 chrIX:394736-395149 8.37e-01 100 chrIV:118329-118765 2.27e-02 5_[+1(8.88e-05)]_71 chrXIII:362909-363257 4.99e-06 30_[+1(3.22e-05)]_17_[+2(1.13e-06)]_\ 8 chrXII:374180-374591 7.17e-08 19_[+1(1.88e-07)]_18_[+2(9.77e-08)]_\ 18 chrXV:113649-113981 1.09e-10 36_[+1(3.21e-09)]_18_[+2(4.25e-09)]_\ 1 chrV:225434-225724 8.05e-01 100 chrII:332352-332709 9.73e-01 100 chrXIV:374662-375101 1.19e-04 37_[+1(2.01e-08)]_39 chrXVI:701304-701471 9.42e-02 100 chrXV:300934-301321 1.12e-04 19_[+1(2.24e-08)]_57 chrX:440592-440692 7.08e-01 100 chrVII:205340-205973 8.51e-02 100 chrXVI:55924-56454 8.27e-05 39_[-2(1.15e-07)]_40 chrVI:137299-137716 3.31e-04 38_[-2(1.69e-07)]_41 chrI:142509-143074 8.04e-01 100 chrXI:463255-463855 9.28e-02 100 chrV:483213-483391 8.94e-03 5_[+1(2.58e-05)]_34_[-1(2.75e-05)]_\ 13 chrXII:92376-92780 1.12e-04 19_[+1(2.24e-08)]_57 chrVIII:382931-383416 9.14e-01 100 chrVI:83963-84180 4.32e-01 100 chrIV:1238144-1238580 5.59e-01 100 chrX:74791-74891 9.63e-01 100 chrIX:99660-99976 1.96e-01 100 chrXI:355944-356492 7.45e-01 100 chrXI:558901-559337 3.24e-02 48_[-1(3.79e-05)]_28 chrIV:45569-46005 3.58e-01 100 chrXII:638843-639140 3.63e-01 100 chrXIII:504891-505133 1.21e-01 15_[+2(7.71e-05)]_64 chrXVI:432727-434031 5.10e-01 100 chrX:391860-391960 2.06e-01 100 chrVII:738964-739339 6.27e-15 20_[+1(7.05e-12)]_19_[+2(9.04e-11)]_\ 16 chrVI:53324-53482 7.06e-01 100 chrVIII:273239-273923 2.60e-01 100 chrXVI:693297-693733 6.09e-01 100 chrXIII:500168-500430 7.21e-01 100 chrXI:109785-109967 9.78e-01 100 chrVI:40379-40815 4.86e-01 100 chrIV:366093-366335 2.15e-01 100 chrV:140508-140849 9.47e-01 100 chrII:287835-288228 9.80e-01 100 chrIV:341314-341580 2.81e-01 100 chrXIII:886965-887401 1.49e-01 100 chrVII:440545-440990 1.47e-08 8_[-2(5.88e-08)]_37_[-1(3.44e-08)]_\ 10 chrX:378211-378311 5.49e-06 48_[+1(1.13e-08)]_28 chrXII:796992-797367 2.51e-16 59_[-3(3.89e-19)]_11 chrIV:235025-235461 5.73e-01 100 chrXIII:626363-626887 9.47e-01 100 chrIV:322991-323325 9.04e-01 100 chrXII:794176-795535 5.45e-01 100 chrXIV:518955-519191 3.57e-01 100 chrXV:80691-80826 7.80e-01 100 chrIV:356443-356879 6.17e-02 62_[-2(6.10e-05)]_17 chrV:85106-85805 9.69e-02 100 chrXVI:769052-769506 3.83e-04 49_[-1(3.44e-08)]_27 chrIV:1489059-1489935 6.76e-01 100 chrXII:819927-820363 8.79e-01 100 chrIV:538997-539225 2.31e-01 100 chrII:164995-165519 4.63e-01 100 chrX:424328-424428 1.06e-04 28_[-1(6.94e-08)]_48 chrXV:228156-228522 6.60e-04 41_[+1(7.64e-08)]_35 chrVIII:505198-505634 4.32e-01 100 chrIX:427120-427826 7.62e-01 100 chrV:141026-141385 6.29e-01 100 chrVII:806820-807036 5.41e-01 100 chrXVI:821610-822289 9.90e-01 100 chrX:541388-541488 9.06e-06 23_[+1(9.90e-06)]_17_[+2(7.97e-07)]_\ 15 chrXIII:732740-733176 5.71e-01 100 chrV:492162-492592 7.17e-08 34_[-2(9.77e-08)]_18_[-1(1.88e-07)]_\ 3 chrXI:610447-611538 7.57e-01 100 chrXII:784191-784579 1.35e-06 18_[+1(1.85e-09)]_58 chrII:614455-614891 9.60e-01 100 chrII:605760-606109 2.77e-01 100 chrVIII:555761-556197 5.51e-01 100 chrXIII:164091-164350 5.46e-02 100 chrV:423130-423454 9.09e-01 100 chrVII:610845-611281 8.17e-02 100 chrV:435649-435976 5.36e-05 38_[-1(5.41e-09)]_38 chrXVI:819342-819753 1.07e-14 31_[+1(7.05e-12)]_19_[+2(9.04e-11)]_\ 5 chrXVI:795534-795970 1.67e-01 100 chrII:301352-301497 7.03e-01 100 chrI:142372-142574 8.91e-01 100 chrXV:110247-110683 6.67e-02 100 chrXII:818457-818821 3.66e-07 19_[+1(1.79e-06)]_17_[+2(5.39e-08)]_\ 19 chrXIII:808131-808508 5.91e-06 24_[-1(5.21e-07)]_52 chrVII:412165-412538 9.05e-11 2_[-2(6.78e-09)]_19_[-1(1.13e-08)]_\ 34 chrXIII:379215-379577 4.00e-03 38_[-1(8.85e-06)]_38 chrXVI:696946-697151 9.03e-01 100 chrXV:796919-797645 8.82e-01 100 chrXI:68696-69027 5.09e-01 100 chrXII:932113-932471 9.99e-01 100 chrXV:28702-29138 7.51e-01 100 chrVII:787671-787837 3.17e-01 100 chrXI:258519-260036 5.39e-01 100 chrVII:556213-556649 4.71e-01 100 chrXIII:290630-290993 2.99e-16 50_[-3(3.89e-19)]_20 chrVII:807235-807344 6.58e-01 100 chrI:151467-151903 2.93e-01 100 chrIV:1443765-1444121 9.32e-01 100 chrXI:101446-101882 6.06e-01 100 chrXV:1027915-1028555 5.56e-01 100 chrIX:141463-142054 9.93e-01 100 chrII:9427-9758 1.00e-04 40_[+1(6.94e-08)]_36 chrXII:592420-592786 3.82e-06 42_[-1(1.38e-09)]_34 chrXII:460400-460853 1.52e-02 48_[+3(8.59e-05)]_22 chrIX:325691-326155 9.02e-01 100 chrXI:108812-109053 7.07e-01 100 chrXIII:880535-880897 9.92e-01 100 chrIII:71552-71732 2.21e-01 100 chrXV:968123-968330 9.85e-02 100 chrXVI:591108-591247 1.96e-01 100 chrXIV:619778-619990 3.41e-01 100 chrXIII:253345-253604 7.18e-01 100 chrV:424932-425220 6.80e-01 100 chrXIII:702189-702625 8.10e-01 100 chrV:487219-487552 7.29e-23 5_[-2(6.15e-10)]_[+3(3.89e-19)]_44 chrXI:517244-517526 9.32e-01 100 chrXIV:110722-110963 9.51e-01 100 chrXV:866585-866917 7.14e-01 100 chrVI:162062-162389 1.65e-04 52_[+1(1.45e-07)]_24 chrX:144835-144935 6.64e-01 100 chrXVI:699989-700341 3.32e-01 100 chrIV:437627-437964 9.10e-10 26_[+1(5.53e-10)]_27_[+2(2.63e-07)]_\ 2 chrXII:1028886-1029322 9.80e-01 100 chrIX:257387-257741 2.43e-01 100 chrVII:920589-921025 9.41e-01 100 chrVII:555360-555662 7.58e-02 100 chrIII:142613-142937 1.85e-04 22_[-1(1.45e-07)]_54 chrVII:700481-701208 7.38e-01 100 chrIV:1156353-1156575 9.87e-01 100 chrXV:841600-842036 7.57e-01 100 chrIV:362754-363190 2.69e-01 100 chrV:305802-306172 7.55e-01 100 chrXVI:214865-215184 8.63e-01 100 chrIV:488511-489051 8.25e-05 75_[-2(1.04e-08)]_4 chrVII:541679-542130 3.07e-21 6_[-3(3.89e-19)]_[+2(6.15e-10)]_43 chrVII:846859-847295 6.42e-01 100 chrVI:65018-65299 8.79e-01 100 chrVII:788307-788690 9.25e-01 100 chrI:182430-182638 7.95e-04 47_[-2(2.63e-07)]_32 chrXII:839229-839406 9.71e-01 100 chrXIV:525036-525238 2.27e-01 100 chrXV:587793-588286 8.62e-01 100 chrXVI:406222-406506 7.02e-01 100 chrIV:1175645-1176031 2.60e-04 40_[+1(9.22e-08)]_36 chrXIII:651363-651799 8.74e-01 100 chrXIII:223426-223546 9.34e-01 100 chrVII:149148-149497 6.08e-01 100 chrXV:980533-981038 5.37e-06 21_[+2(7.12e-10)]_58 chrXII:796445-796820 5.09e-01 100 chrXV:925123-925465 2.24e-01 100 chrX:139195-139295 6.61e-01 100 chrXIV:88891-89745 9.92e-01 100 chrXII:962865-963230 1.16e-04 34_[-1(6.94e-08)]_42 chrIV:992658-993015 1.85e-04 45_[+1(1.45e-07)]_31 chrVI:157827-158188 4.06e-04 26_[-1(3.44e-08)]_50 chrIV:359405-359811 3.60e-04 18_[+1(3.44e-08)]_58 chrX:122248-122348 2.52e-01 100 chrXII:230373-231040 1.28e-01 100 chrV:461807-462253 6.12e-01 100 chrIV:357255-357678 8.03e-01 100 chrXIV:722584-723020 9.37e-01 100 chrII:235193-235468 7.42e-01 100 chrVIII:126545-126981 9.58e-01 100 chrVII:648198-648346 5.32e-01 100 chrV:396248-396551 9.37e-01 100 chrVII:794258-794586 8.56e-07 44_[+1(1.41e-10)]_32 chrII:60909-61211 6.15e-01 100 chrXVI:173300-173779 9.80e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************