Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.01361 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.056785 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.071752 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.014196 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.065679 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background Finished invoke: name: bg status: 0 time: 0.011659 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 935.546277 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 96.266014 Invoking: centrimo -seqlen 410 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.186704 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.592422 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary GSBYNNDTGGYBYAGTGGKWWRAGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.537383 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.455638 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary RRTGTAYGGRTGT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.458093 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary AARAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.391759 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary CAAMTTGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.236652 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary TAAGGCR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.297956 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.387778 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.217969 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.217612 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary TACCACYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.208078 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary ATCKTGAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.215419 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary AKATGTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.268702 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary AWCACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.24037 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary GCARATGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.190473 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary ATAGTGTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.230871 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -primary GGAAGAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.235199 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif GSBYNNDTGGYBYAGTGGKWWRAGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo1 status: 0 time: 0.229045 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo2 status: 0 time: 0.232444 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif RRTGTAYGGRTGT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo3 status: 0 time: 0.212363 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif AARAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo4 status: 0 time: 0.120313 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif CAAMTTGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo5 status: 0 time: 0.135088 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif TAAGGCR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo6 status: 0 time: 0.134057 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo7 status: 0 time: 0.133052 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo8 status: 0 time: 0.135466 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo9 status: 0 time: 0.133757 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif TACCACYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo10 status: 0 time: 0.134937 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif ATCKTGAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo11 status: 0 time: 0.135285 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif AKATGTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo12 status: 0 time: 0.119777 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif AWCACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo13 status: 0 time: 0.134405 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif GCARATGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo14 status: 0 time: 0.135732 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif ATAGTGTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo15 status: 0 time: 0.134859 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background --motif GGAAGAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/AWRI1631--SWI1.fa Finished invoke: name: fimo16 status: 0 time: 0.133935 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/summary.tsv Finished invoke: name: summary status: 0 time: 0.161123 Done