******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXII:673823-674233 1.0000 100 chrXIII:372285-372628 1.0000 100 chrIV:132680-133294 1.0000 100 chrVII:516252-516646 1.0000 100 chrII:181362-181609 1.0000 100 chrIV:465068-465692 1.0000 100 chrIV:1256907-1257258 1.0000 100 chrV:354741-355234 1.0000 100 chrIV:1450036-1450170 1.0000 100 chrX:517693-517793 1.0000 100 chrXIV:631730-632094 1.0000 100 chrXII:86946-87173 1.0000 100 chrV:138484-138928 1.0000 100 chrIX:99649-100011 1.0000 100 chrVII:400176-400586 1.0000 100 chrXII:731953-732282 1.0000 100 chrIV:538969-539216 1.0000 100 chrVIII:122179-122617 1.0000 100 chrVI:83094-83288 1.0000 100 chrXVI:40247-40706 1.0000 100 chrVIII:452618-452961 1.0000 100 chrXI:74442-74821 1.0000 100 chrXV:796930-797429 1.0000 100 chrIX:248647-249403 1.0000 100 chrXV:677986-678396 1.0000 100 chrVIII:175062-175380 1.0000 100 chrVI:31027-31503 1.0000 100 chrXIII:552900-553153 1.0000 100 chrXII:214769-215107 1.0000 100 chrXVI:376912-377322 1.0000 100 chrXVI:173015-173236 1.0000 100 chrIV:1305454-1305815 1.0000 100 chrXIV:443663-444073 1.0000 100 chrXI:518762-519273 1.0000 100 chrIX:257362-257719 1.0000 100 chrII:88956-89366 1.0000 100 chrIV:1401266-1401585 1.0000 100 chrXV:882097-882507 1.0000 100 chrIX:210480-210889 1.0000 100 chrXVI:585881-586119 1.0000 100 chrXVI:67023-67324 1.0000 100 chrVIII:388734-389024 1.0000 100 chrXVI:641197-641713 1.0000 100 chrX:197189-197289 1.0000 100 chrXII:234639-234791 1.0000 100 chrXIV:102534-103014 1.0000 100 chrIV:1492557-1492967 1.0000 100 chrII:414839-415249 1.0000 100 chrV:130967-131335 1.0000 100 chrXII:793715-795085 1.0000 100 chrII:301230-301640 1.0000 100 chrXVI:435748-436144 1.0000 100 chrIV:580393-580803 1.0000 100 chrXV:759065-759475 1.0000 100 chrXII:734642-734981 1.0000 100 chrXIII:551369-551786 1.0000 100 chrXV:671055-671337 1.0000 100 chrIV:1450891-1451240 1.0000 100 chrXVI:643245-643655 1.0000 100 chrV:176925-177361 1.0000 100 chrXIII:279905-280177 1.0000 100 chrXI:99692-100167 1.0000 100 chrX:123118-123218 1.0000 100 chrXII:950069-951312 1.0000 100 chrVIII:296879-297207 1.0000 100 chrX:651270-651370 1.0000 100 chrXIV:444464-444772 1.0000 100 chrXI:248349-248481 1.0000 100 chrXII:795163-795462 1.0000 100 chrVII:481920-482578 1.0000 100 chrXIV:499375-499595 1.0000 100 chrIV:83388-83721 1.0000 100 chrXVI:425219-425488 1.0000 100 chrXII:809262-809611 1.0000 100 chrVIII:455593-455887 1.0000 100 chrXIII:225359-225716 1.0000 100 chrXII:426947-427361 1.0000 100 chrIV:1359392-1359792 1.0000 100 chrXII:592407-592796 1.0000 100 chrXVI:242807-243025 1.0000 100 chrXII:932098-932493 1.0000 100 chrXV:778910-779320 1.0000 100 chrVII:366051-366490 1.0000 100 chrXII:789759-790169 1.0000 100 chrVIII:475544-475949 1.0000 100 chrXV:908675-908863 1.0000 100 chrII:332317-332729 1.0000 100 chrIV:385973-386404 1.0000 100 chrXIII:752832-753242 1.0000 100 chrXV:980548-980922 1.0000 100 chrVII:930862-931189 1.0000 100 chrIV:1355741-1355977 1.0000 100 chrXII:369289-370085 1.0000 100 chrIV:579054-579377 1.0000 100 chrXI:283064-283474 1.0000 100 chrVII:794237-794598 1.0000 100 chrX:608470-608570 1.0000 100 chrV:321862-322759 1.0000 100 chrXIII:301709-302119 1.0000 100 chrVII:122112-122517 1.0000 100 chrIII:142611-142953 1.0000 100 chrII:373145-373407 1.0000 100 chrXIII:411736-412146 1.0000 100 chrXII:88211-88409 1.0000 100 chrIX:187727-187971 1.0000 100 chrX:703260-703360 1.0000 100 chrXII:947338-947748 1.0000 100 chrVII:648033-648443 1.0000 100 chrXI:309309-309719 1.0000 100 chrXIV:575274-575684 1.0000 100 chrIV:520805-521170 1.0000 100 chrI:138971-139357 1.0000 100 chrXV:300924-301332 1.0000 100 chrV:140467-140908 1.0000 100 chrVII:807276-807686 1.0000 100 chrXII:947111-947521 1.0000 100 chrXI:590037-590139 1.0000 100 chrV:140996-141400 1.0000 100 chrXII:721770-722180 1.0000 100 chrVII:287203-287635 1.0000 100 chrXIV:229783-230193 1.0000 100 chrV:441818-442602 1.0000 100 chrXIII:572744-573144 1.0000 100 chrIV:308025-308385 1.0000 100 chrIV:434105-434461 1.0000 100 chrXIV:783397-783807 1.0000 100 chrIX:316835-317245 1.0000 100 chrVI:224825-225328 1.0000 100 chrX:204552-204652 1.0000 100 chrXIII:504886-505158 1.0000 100 chrVII:255195-255406 1.0000 100 chrIX:324137-324417 1.0000 100 chrX:526014-526114 1.0000 100 chrVIII:34933-35220 1.0000 100 chrX:121855-121955 1.0000 100 chrXVI:581887-582277 1.0000 100 chrXI:162283-162728 1.0000 100 chrIII:30564-30818 1.0000 100 chrXII:522159-522420 1.0000 100 chrX:355196-355296 1.0000 100 chrXII:262815-263080 1.0000 100 chrIV:1489077-1489639 1.0000 100 chrXIII:388335-388633 1.0000 100 chrX:542829-542929 1.0000 100 chrXV:619164-619598 1.0000 100 chrXII:300384-300667 1.0000 100 chrXII:65430-65715 1.0000 100 chrXIII:586528-586874 1.0000 100 chrXIII:162059-162469 1.0000 100 chrXV:1028671-1029106 1.0000 100 chrVIII:555815-556225 1.0000 100 chrIV:357216-357626 1.0000 100 chrXI:84030-84383 1.0000 100 chrVIII:148947-149262 1.0000 100 chrXIII:302733-303136 1.0000 100 chrIV:1461547-1461881 1.0000 100 chrXII:243303-243713 1.0000 100 chrX:617739-617839 1.0000 100 chrIV:217172-217524 1.0000 100 chrV:42215-42357 1.0000 100 chrXV:281980-282355 1.0000 100 chrXII:784175-784575 1.0000 100 chrVII:785487-785663 1.0000 100 chrXVI:406212-406547 1.0000 100 chrI:70030-70185 1.0000 100 chrXIV:374712-375074 1.0000 100 chrXV:1004091-1004419 1.0000 100 chrV:139791-140012 1.0000 100 chrXIV:217295-217627 1.0000 100 chrV:522694-523104 1.0000 100 chrXII:199209-199655 1.0000 100 chrVII:968759-969169 1.0000 100 chrX:157464-157564 1.0000 100 chrXII:806583-806775 1.0000 100 chrVI:223921-224192 1.0000 100 chrVII:574780-575190 1.0000 100 chrVII:959325-959613 1.0000 100 chrII:226928-227289 1.0000 100 chrIV:835782-836287 1.0000 100 chrIII:139210-139620 1.0000 100 chrVI:101196-101560 1.0000 100 chrXII:975870-976215 1.0000 100 chrVIII:62570-62942 1.0000 100 chrII:165932-166342 1.0000 100 chrXVI:453434-453766 1.0000 100 chrV:249802-249962 1.0000 100 chrXIII:661679-662053 1.0000 100 chrVII:771975-772182 1.0000 100 chrXV:836690-836903 1.0000 100 chrV:438529-438853 1.0000 100 chrIV:541279-541853 1.0000 100 chrXII:628198-628654 1.0000 100 chrXII:1029643-1030053 1.0000 100 chrXII:198623-198762 1.0000 100 chrIV:490985-491261 1.0000 100 chrXVI:775645-776010 1.0000 100 chrX:541373-541473 1.0000 100 chrVIII:75828-75937 1.0000 100 chrXII:603573-603983 1.0000 100 chrX:58919-59019 1.0000 100 chrXII:637406-637602 1.0000 100 chrVII:702882-703236 1.0000 100 chrVII:426976-427230 1.0000 100 chrVIII:125928-126296 1.0000 100 chrXV:312571-312903 1.0000 100 chrXII:374169-374606 1.0000 100 chrIII:11065-11475 1.0000 100 chrVII:798559-798969 1.0000 100 chrIII:58762-58929 1.0000 100 chrXV:92933-93310 1.0000 100 chrII:89629-89964 1.0000 100 chrV:260309-260719 1.0000 100 chrI:182427-182627 1.0000 100 chrVIII:34558-34821 1.0000 100 chrX:648889-648989 1.0000 100 chrXV:288004-288441 1.0000 100 chrXIV:663671-664081 1.0000 100 chrVI:64202-64388 1.0000 100 chrXII:713138-713568 1.0000 100 chrXIV:241396-241744 1.0000 100 chrIV:1236783-1237193 1.0000 100 chrXVI:810531-810842 1.0000 100 chrXVI:719359-719524 1.0000 100 chrIV:359398-359811 1.0000 100 chrIX:427238-427485 1.0000 100 chrIV:1150716-1151105 1.0000 100 chrXIV:63127-63538 1.0000 100 chrIX:370228-370652 1.0000 100 chrV:301675-302085 1.0000 100 chrV:135272-135657 1.0000 100 chrIV:1162483-1162893 1.0000 100 chrXVI:281581-281883 1.0000 100 chrXV:274483-274918 1.0000 100 chrXV:678837-679171 1.0000 100 chrIV:341268-341606 1.0000 100 chrX:607263-607363 1.0000 100 chrVIII:451581-451792 1.0000 100 chrXV:1025758-1025995 1.0000 100 chrXIV:665015-665284 1.0000 100 chrIII:16913-17237 1.0000 100 chrXII:498517-498874 1.0000 100 chrV:52498-52650 1.0000 100 chrXIII:145908-146263 1.0000 100 chrVI:137287-137725 1.0000 100 chrIV:491587-491997 1.0000 100 chrVI:210503-210882 1.0000 100 chrVII:319716-319981 1.0000 100 chrIV:721795-722074 1.0000 100 chrVIII:48291-48495 1.0000 100 chrXV:382990-383196 1.0000 100 chrII:642905-643247 1.0000 100 chrXIII:754424-754768 1.0000 100 chrV:424948-425358 1.0000 100 chrV:396220-396556 1.0000 100 chrIX:386566-387019 1.0000 100 chrXIII:379202-379587 1.0000 100 chrVII:882879-883062 1.0000 100 chrXII:1028204-1028564 1.0000 100 chrVI:64982-65332 1.0000 100 chrVIII:237722-238121 1.0000 100 chrXI:108749-109074 1.0000 100 chrV:68964-69466 1.0000 100 chrV:261041-261451 1.0000 100 chrXIII:510833-511243 1.0000 100 chrVII:399615-400025 1.0000 100 chrVII:1050214-1050555 1.0000 100 chrVIII:132906-133138 1.0000 100 chrVIII:105351-105538 1.0000 100 chrXIV:567965-568307 1.0000 100 chrIV:230263-230673 1.0000 100 chrII:605720-606132 1.0000 100 chrXV:989045-989456 1.0000 100 chrXII:366071-366450 1.0000 100 chrXIV:355480-355671 1.0000 100 chrII:604129-604471 1.0000 100 chrXV:83104-83514 1.0000 100 chrV:61556-62125 1.0000 100 chrVI:180722-181220 1.0000 100 chrIV:976478-976788 1.0000 100 chrV:487232-487561 1.0000 100 chrIX:394749-395099 1.0000 100 chrIV:930671-930943 1.0000 100 chrVII:730960-731354 1.0000 100 chrXV:911939-912730 1.0000 100 chrXII:962876-963238 1.0000 100 chrXIII:352098-352451 1.0000 100 chrII:60830-61255 1.0000 100 chrX:415837-415937 1.0000 100 chrXV:594255-594595 1.0000 100 chrXI:308007-308375 1.0000 100 chrVII:515-730 1.0000 100 chrIX:254232-254544 1.0000 100 chrVII:364966-365376 1.0000 100 chrV:269138-269548 1.0000 100 chrXV:412169-412579 1.0000 100 chrXIV:104654-105072 1.0000 100 chrIV:488473-489063 1.0000 100 chrV:117685-118278 1.0000 100 chrXIII:747789-748130 1.0000 100 chrIV:802587-802984 1.0000 100 chrXIV:417506-417770 1.0000 100 chrXV:253819-254097 1.0000 100 chrXIII:759200-759339 1.0000 100 chrXII:796986-797365 1.0000 100 chrXV:226500-226860 1.0000 100 chrVI:226505-226932 1.0000 100 chrIV:1201576-1202002 1.0000 100 chrVII:848665-848863 1.0000 100 chrVII:440518-440988 1.0000 100 chrV:51826-52236 1.0000 100 chrXII:924472-924845 1.0000 100 chrXIV:442830-443291 1.0000 100 chrXII:818835-819155 1.0000 100 chrIV:1080389-1080857 1.0000 100 chrXIII:296776-297468 1.0000 100 chrXIV:716088-716532 1.0000 100 chrIV:599651-600219 1.0000 100 chrII:477065-477581 1.0000 100 chrX:73401-73501 1.0000 100 chrVIII:134170-134549 1.0000 100 chrVII:878539-878993 1.0000 100 chrVII:148494-148904 1.0000 100 chrXII:460402-460751 1.0000 100 chrXIV:507107-507517 1.0000 100 chrVII:534807-535220 1.0000 100 chrXII:283541-283720 1.0000 100 chrVII:561471-561764 1.0000 100 chrII:167907-168206 1.0000 100 chrXI:614972-615382 1.0000 100 chrIV:1352373-1352676 1.0000 100 chrIII:292683-293093 1.0000 100 chrV:101124-101534 1.0000 100 chrIV:946124-946601 1.0000 100 chrVII:845462-845882 1.0000 100 chrXIII:91138-91298 1.0000 100 chrXII:232175-232584 1.0000 100 chrV:423108-423466 1.0000 100 chrIII:177244-177347 1.0000 100 chrXII:781465-781860 1.0000 100 chrII:255063-255473 1.0000 100 chrIV:541754-542122 1.0000 100 chrXII:404167-404489 1.0000 100 chrXII:922118-922549 1.0000 100 chrXVI:76353-76721 1.0000 100 chrIII:149743-150126 1.0000 100 chrXII:1012090-1012397 1.0000 100 chrXII:241630-241997 1.0000 100 chrVII:1004051-1004415 1.0000 100 chrV:174660-175070 1.0000 100 chrXI:356113-356348 1.0000 100 chrVII:437189-437599 1.0000 100 chrVIII:382920-383344 1.0000 100 chrII:374878-375288 1.0000 100 chrIV:1302051-1302461 1.0000 100 chrIV:1278704-1278900 1.0000 100 chrX:122050-122150 1.0000 100 chrVII:319313-319457 1.0000 100 chrII:391452-391862 1.0000 100 chrV:492199-492597 1.0000 100 chrV:225411-225742 1.0000 100 chrXII:368171-368602 1.0000 100 chrXIII:123256-123666 1.0000 100 chrX:422767-422867 1.0000 100 chrVII:700473-701230 1.0000 100 chrVII:806161-806571 1.0000 100 chrIV:234218-234668 1.0000 100 chrV:99947-100370 1.0000 100 chrXV:445847-446131 1.0000 100 chrV:469282-469620 1.0000 100 chrXVI:794516-794786 1.0000 100 chrXIII:653609-653726 1.0000 100 chrXVI:860194-860595 1.0000 100 chrXVI:431949-432351 1.0000 100 chrIII:123435-123804 1.0000 100 chrII:88135-88525 1.0000 100 chrXV:987598-988008 1.0000 100 chrVII:323792-324114 1.0000 100 chrVII:557630-558023 1.0000 100 chrXV:160368-160778 1.0000 100 chrXII:48710-49078 1.0000 100 chrV:435646-435997 1.0000 100 chrVIII:554213-554623 1.0000 100 chrIII:68378-68681 1.0000 100 chrXIII:267985-268251 1.0000 100 chrX:531644-531744 1.0000 100 chrIX:127745-128086 1.0000 100 chrXVI:745472-745882 1.0000 100 chrVIII:146072-146462 1.0000 100 chrXII:92365-92824 1.0000 100 chrIII:127536-127896 1.0000 100 chrVIII:358326-358746 1.0000 100 chrXVI:502864-503174 1.0000 100 chrVII:438593-438902 1.0000 100 chrXI:46639-46980 1.0000 100 chrXV:897523-897933 1.0000 100 chrX:115830-115930 1.0000 100 chrV:288187-288694 1.0000 100 chrXI:259521-259816 1.0000 100 chrIV:619811-620220 1.0000 100 chrIII:78257-78802 1.0000 100 chrIII:137797-138207 1.0000 100 chrVII:914868-915196 1.0000 100 chrXVI:214855-215185 1.0000 100 chrX:233753-233853 1.0000 100 chrVII:856733-856982 1.0000 100 chrVII:405394-405713 1.0000 100 chrXV:780366-780869 1.0000 100 chrIX:388635-388913 1.0000 100 chrVII:328416-328884 1.0000 100 chrIII:168171-168561 1.0000 100 chrV:443096-443429 1.0000 100 chrVIII:148217-148627 1.0000 100 chrXVI:730915-731325 1.0000 100 chrXV:978133-978543 1.0000 100 chrVII:609634-610210 1.0000 100 chrXVI:188599-188958 1.0000 100 chrIV:1095167-1095638 1.0000 100 chrIV:980826-981203 1.0000 100 chrXVI:812830-813134 1.0000 100 chrXVI:210030-210446 1.0000 100 chrIX:382203-382399 1.0000 100 chrXIV:65250-65500 1.0000 100 chrVI:162046-162383 1.0000 100 chrVII:482672-482957 1.0000 100 chrIV:332851-333261 1.0000 100 chrXII:638539-638691 1.0000 100 chrXIV:89041-89720 1.0000 100 chrVIII:381640-381842 1.0000 100 chrXVI:769060-769493 1.0000 100 chrXV:109545-110111 1.0000 100 chrXI:578784-579275 1.0000 100 chrVII:919722-920132 1.0000 100 chrVII:23240-23650 1.0000 100 chrVIII:382269-382679 1.0000 100 chrXVI:645363-645748 1.0000 100 chrXV:113625-113982 1.0000 100 chrXIII:297377-298862 1.0000 100 chrVII:479274-479489 1.0000 100 chrIV:1164964-1165171 1.0000 100 chrVI:95469-95881 1.0000 100 chrVII:857231-857647 1.0000 100 chrXIV:64050-64460 1.0000 100 chrXV:976234-976635 1.0000 100 chrI:180960-181435 1.0000 100 chrXVI:405115-405581 1.0000 100 chrXIII:652374-652940 1.0000 100 chrXII:84086-84402 1.0000 100 chrXII:856150-856560 1.0000 100 chrIV:591629-591957 1.0000 100 chrXV:977922-978332 1.0000 100 chrXII:499407-499592 1.0000 100 chrXV:841696-842106 1.0000 100 chrXIII:650763-651173 1.0000 100 chrVIII:401059-401293 1.0000 100 chrXII:459548-460096 1.0000 100 chrXV:167975-168464 1.0000 100 chrVII:774167-774604 1.0000 100 chrXI:618805-619208 1.0000 100 chrXI:490768-491158 1.0000 100 chrVII:990103-990338 1.0000 100 chrXIII:808107-808524 1.0000 100 chrIV:117178-117582 1.0000 100 chrXII:125136-125405 1.0000 100 chrXV:866564-866930 1.0000 100 chrXIII:420438-420830 1.0000 100 chrXV:438465-438881 1.0000 100 chrI:141619-142062 1.0000 100 chrXII:710632-710899 1.0000 100 chrIX:316132-316589 1.0000 100 chrXVI:880130-880552 1.0000 100 chrVI:31943-32277 1.0000 100 chrIV:551007-551417 1.0000 100 chrII:168552-168962 1.0000 100 chrXII:282507-282891 1.0000 100 chrXI:364316-364647 1.0000 100 chrVII:786951-787361 1.0000 100 chrXI:140729-141273 1.0000 100 chrVII:592390-592800 1.0000 100 chrXII:903426-903640 1.0000 100 chrX:75973-76073 1.0000 100 chrXVI:243888-244298 1.0000 100 chrXV:901347-901757 1.0000 100 chrXVI:770795-771089 1.0000 100 chrVII:661561-661927 1.0000 100 chrI:81950-82269 1.0000 100 chrIX:177501-177911 1.0000 100 chrXIII:732044-732397 1.0000 100 chrXV:571778-572140 1.0000 100 chrXI:231156-231676 1.0000 100 chrIX:322375-322785 1.0000 100 chrXV:897752-898162 1.0000 100 chrVIII:294020-294430 1.0000 100 chrXI:614218-614320 1.0000 100 chrXIV:87385-87759 1.0000 100 chrXVI:622327-622841 1.0000 100 chrXI:513226-513583 1.0000 100 chrXV:832497-832728 1.0000 100 chrXV:216250-216684 1.0000 100 chrXV:110832-111160 1.0000 100 chrVII:828476-828983 1.0000 100 chrXVI:856732-857128 1.0000 100 chrXII:940784-941194 1.0000 100 chrIV:130013-130337 1.0000 100 chrXII:1051988-1052267 1.0000 100 chrIV:1017017-1017459 1.0000 100 chrXII:645800-646212 1.0000 100 chrVIII:103899-104245 1.0000 100 chrVII:799-914 1.0000 100 chrXV:505124-505494 1.0000 100 chrXIV:518996-519165 1.0000 100 chrV:176925-177363 1.0000 100 chrIV:386453-386960 1.0000 100 chrII:165028-165517 1.0000 100 chrXVI:282242-282652 1.0000 100 chrII:45006-45343 1.0000 100 chrXII:875213-875594 1.0000 100 chrIV:645033-645393 1.0000 100 chrIV:230060-230470 1.0000 100 chrXV:1027946-1028240 1.0000 100 chrVII:738940-739333 1.0000 100 chrVII:437895-438305 1.0000 100 chrXIII:119221-119526 1.0000 100 chrXIII:880526-880889 1.0000 100 chrVI:221750-222072 1.0000 100 chrXVI:378673-378933 1.0000 100 chrV:430992-431535 1.0000 100 chrIX:183316-183700 1.0000 100 chrXII:728277-728617 1.0000 100 chrXV:391593-391846 1.0000 100 chrVII:823313-823698 1.0000 100 chrII:326654-327054 1.0000 100 chrXVI:520174-520540 1.0000 100 chrV:102308-102718 1.0000 100 chrXVI:699958-700401 1.0000 100 chrIX:68211-68506 1.0000 100 chrXI:326940-327138 1.0000 100 chrIV:667789-668231 1.0000 100 chrXII:1018993-1019351 1.0000 100 chrXIII:306101-306911 1.0000 100 chrXIV:174195-174605 1.0000 100 chrXIV:392482-392684 1.0000 100 chrII:555863-556080 1.0000 100 chrXI:430699-431109 1.0000 100 chrXIII:550710-551120 1.0000 100 chrIV:221973-222315 1.0000 100 chrV:434414-434775 1.0000 100 chrXVI:302688-302975 1.0000 100 chrIV:1300948-1301323 1.0000 100 chrIII:163440-163893 1.0000 100 chrVII:149129-149519 1.0000 100 chrXI:558633-559043 1.0000 100 chrIII:139005-139415 1.0000 100 chrIV:543658-544068 1.0000 100 chrXV:159670-159847 1.0000 100 chrXV:968035-968435 1.0000 100 chrXIII:302005-302415 1.0000 100 chrXIII:631930-632340 1.0000 100 chrV:250235-250514 1.0000 100 chrVII:807246-807355 1.0000 100 chrXIV:575474-575884 1.0000 100 chrVII:346182-346525 1.0000 100 chrVII:20404-20814 1.0000 100 chrX:139822-139922 1.0000 100 chrIII:179018-179428 1.0000 100 chrXI:334194-334321 1.0000 100 chrII:405694-406172 1.0000 100 chrIV:411256-411640 1.0000 100 chrV:461771-462178 1.0000 100 chrVI:157806-158190 1.0000 100 chrV:85819-86827 1.0000 100 chrXV:80662-81072 1.0000 100 chrVII:399414-399824 1.0000 100 chrXIII:290619-291053 1.0000 100 chrXIV:495209-495572 1.0000 100 chrXIV:138173-138430 1.0000 100 chrXVI:829079-829372 1.0000 100 chrXV:779703-780413 1.0000 100 chrXV:424379-424647 1.0000 100 chrX:424334-424434 1.0000 100 chrIV:323164-323574 1.0000 100 chrXVI:718477-718802 1.0000 100 chrX:374208-374308 1.0000 100 chrIII:151038-151553 1.0000 100 chrXV:742262-742672 1.0000 100 chrXVI:280799-281242 1.0000 100 chrII:613944-614354 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 586 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58600 N= 586 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.298 C 0.202 G 0.202 T 0.298 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--SWI1/background): A 0.310 C 0.190 G 0.190 T 0.310 ******************************************************************************** ******************************************************************************** MOTIF TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK MEME-1 width = 30 sites = 69 llr = 1439 E-value = 1.8e-300 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK MEME-1 Description -------------------------------------------------------------------------------- Simplified A 167::3247243:3:11::::2a1::::31 pos.-specific C 221372:111:17533::::a::34a7541 probability G 11123445376::1458a:::8:2:::435 matrix T 6114:231:::73131::aa:::56:21:3 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * ** * * Relative 1.4 * * ****** * Entropy 1.2 * * * ******* ** (30.1 bits) 1.0 * * * ******* *** 0.7 * *** * ********* ***** 0.5 ***** **************** ****** 0.2 ****************************** 0.0 ------------------------------ Multilevel TAATCGGGAGGTCCGGGGTTCGATTCCCCG consensus CC CGATAGAAATACC A CC GGT sequence T A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXIII:290619-291053 + 49 5.51e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTC chrV:176925-177363 + 39 5.51e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrIV:1017017-1017459 - 27 5.51e-14 CATCACGTTC TCACCGTGGAGACCGGGGTTCGACTCCCCG CTTCGGAGTT chrXVI:210030-210446 - 12 5.51e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTT chrVII:328416-328884 + 17 5.51e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTT chrIX:370228-370652 + 61 5.51e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrV:176925-177361 + 40 5.51e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrV:354741-355234 + 31 5.51e-14 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrIV:667789-668231 - 55 5.84e-13 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrXII:1051988-1052267 - 2 5.84e-13 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGCT A chrXVI:880130-880552 - 13 5.84e-13 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrIX:210480-210889 + 67 5.84e-13 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGCT AGAG chrIII:123435-123804 - 16 1.24e-12 TCTCGCTTAG GGTGCGGGAGGTCCCGGGTTCGAGTCCCGG CTCGCCCCAC chrIII:151038-151553 - 47 1.67e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrIV:1201576-1202002 + 46 1.67e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAA chrVI:226505-226932 - 28 1.67e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTA chrV:135272-135657 - 19 1.67e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrXVI:581887-582277 + 65 1.67e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGG chrVII:122112-122517 + 40 1.67e-12 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAT chrXVI:860194-860595 + 68 2.94e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGGG CTT chrVII:845462-845882 + 60 2.94e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGGG CTTGCGCAAT chrVI:180722-181220 - 61 2.94e-12 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGGG CTTGCGCAGT chrII:405694-406172 + 29 6.60e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:828476-828983 - 52 6.60e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:405394-405713 + 1 6.60e-12 . TAATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrXI:162283-162728 - 40 6.60e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGTT chrXII:214769-215107 - 3 6.60e-12 GCTTCCCTTG CAAGGAAGAGGTCATCGGTTCGATTCCGGT TG chrV:138484-138928 + 44 6.60e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGTT chrVIII:134170-134549 + 46 1.82e-11 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAATCCGGG TAGGACCTTT chrIV:802587-802984 - 4 1.82e-11 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAATCCGGG TAG chrIV:520805-521170 + 69 1.82e-11 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAATCCGGG TA chrXII:92365-92824 + 69 2.93e-11 GAAGACAAAG CATGCGAGAGGCCCTGGGTTCAATTCCCAG CT chrXV:980548-980922 + 65 2.93e-11 AGGAACAAAG CATGCGAGAGGCCCTGGGTTCAATTCCCAG CTCGCC chrXIV:104654-105072 + 27 1.54e-10 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrX:58919-59019 - 19 1.54e-10 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrIV:434105-434461 - 39 1.54e-10 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrVIII:475544-475949 - 18 1.90e-10 GTTGCCTTCA CACGGCAAAGGTCCCGAGTTCGATCCTCGG TTGGAACATT chrVII:823313-823698 + 63 2.57e-10 ATCTGCTTAA CACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCA chrXIII:420438-420830 - 12 2.57e-10 ATCTGCTTAA CACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXI:308007-308375 - 11 2.57e-10 ATCTGCTTAA CACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrXIII:372285-372628 - 47 2.57e-10 ATCTGCTTAA CACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXVI:856732-857128 + 57 3.81e-10 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCATT chrVII:774167-774604 + 49 3.81e-10 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAA chrVIII:146072-146462 - 33 3.81e-10 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAT chrX:197189-197289 - 33 3.81e-10 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAT chrXV:110832-111160 - 24 4.61e-10 TCCCACCCTT CCAAGGTGGGGACACGGGTTCGATTCTCGT ACCGCTCATA chrXVI:622327-622841 - 14 4.61e-10 TTCGGTCAAG TTATCTGGAGGTCCTGTGTTCGATCCACAG AATTCGCATT chrVII:440518-440988 - 21 4.61e-10 TTCGGTCAAG TTATCTGGAGGTCCTGTGTTCGATCCACAG AATTCGCATA chrXI:578784-579275 + 44 8.83e-10 TTAAGCAAGG ATACCGAAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrIV:619811-620220 - 12 2.28e-09 GTCTGGCTAC GAACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrV:492199-492597 - 12 2.28e-09 GTCTGGCTAC GAACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGGA chrXII:374169-374606 + 53 2.28e-09 GTCTGGCTAC GAACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrIV:1095167-1095638 - 26 2.92e-09 TTTGGTCAAG ATATCTGGAGGTCCTGTGTTCGATCCACAG AGTTCGCATT chrX:374208-374308 - 3 3.16e-09 TGGGCGCTTG TCGCGTGCCAGATCGGGGTTCAATTCCCCG TC chrX:541373-541473 + 67 3.16e-09 TGGGCGCTTG TCGCGTGCCAGATCGGGGTTCAATTCCCCG TCGC chrX:204552-204652 + 54 3.16e-09 TGGGCGCTTG TCGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXII:426947-427361 + 62 3.16e-09 TGGGCGCTTG TCGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGAGA chrVII:878539-878993 - 2 4.01e-09 AATAAGATTG CAATCGAAGGGTTGCAGGTTCAATTCCTGT C chrV:99947-100370 + 59 5.06e-09 GCAGGGCTCA TAACCCTGATGTCCTCGGATCGAAACCGAG CGGCGCTAAT chrIII:149743-150126 + 70 5.06e-09 GCAGGGCTCA TAACCCTGATGTCCTCGGATCGAAACCGAG C chrVII:730960-731354 + 66 5.46e-09 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAACCCTCAC TGGGG chrVI:137287-137725 - 38 5.46e-09 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXIV:102534-103014 + 28 5.46e-09 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrIV:946124-946601 + 51 1.13e-08 TATCACTACG AAATCTTGAGATCGGGCGTTCGACTCGCCC CCGGGAGATT chrXV:288004-288441 + 71 1.13e-08 TATCACTACG AAATCTTGAGATCGGGCGTTCGACTCGCCC chrVII:1004051-1004415 + 67 3.48e-08 GTTGCACTTG TAATGCAAAGGTCGTTAGTTCAATTCTGAC AGGT chrXVI:435748-436144 - 5 4.43e-08 AGCAGATTGC AAATCTGTTGGTCCTTAGTTCGATCCTGAG TGCG chrV:434414-434775 - 5 6.28e-08 CACATCGTTG TGGCCGATGAAACCCTGGTTCGATTCTAGG AGAT chrVII:319716-319981 + 17 6.28e-08 CACATCGTTG TGGCCGATGAAACCCTGGTTCGATTCTAGG AGATGGCATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIII:290619-291053 5.5e-14 48_[+1]_22 chrV:176925-177363 5.5e-14 38_[+1]_32 chrIV:1017017-1017459 5.5e-14 26_[-1]_44 chrXVI:210030-210446 5.5e-14 11_[-1]_59 chrVII:328416-328884 5.5e-14 16_[+1]_54 chrIX:370228-370652 5.5e-14 60_[+1]_10 chrV:176925-177361 5.5e-14 39_[+1]_31 chrV:354741-355234 5.5e-14 30_[+1]_40 chrIV:667789-668231 5.8e-13 54_[-1]_16 chrXII:1051988-1052267 5.8e-13 1_[-1]_69 chrXVI:880130-880552 5.8e-13 12_[-1]_58 chrIX:210480-210889 5.8e-13 66_[+1]_4 chrIII:123435-123804 1.2e-12 15_[-1]_55 chrIII:151038-151553 1.7e-12 46_[-1]_24 chrIV:1201576-1202002 1.7e-12 45_[+1]_25 chrVI:226505-226932 1.7e-12 27_[-1]_43 chrV:135272-135657 1.7e-12 18_[-1]_52 chrXVI:581887-582277 1.7e-12 64_[+1]_6 chrVII:122112-122517 1.7e-12 39_[+1]_31 chrXVI:860194-860595 2.9e-12 67_[+1]_3 chrVII:845462-845882 2.9e-12 59_[+1]_11 chrVI:180722-181220 2.9e-12 60_[-1]_10 chrII:405694-406172 6.6e-12 28_[+1]_42 chrVII:828476-828983 6.6e-12 51_[-1]_19 chrVII:405394-405713 6.6e-12 [+1]_70 chrXI:162283-162728 6.6e-12 39_[-1]_31 chrXII:214769-215107 6.6e-12 2_[-1]_68 chrV:138484-138928 6.6e-12 43_[+1]_27 chrVIII:134170-134549 1.8e-11 45_[+1]_25 chrIV:802587-802984 1.8e-11 3_[-1]_67 chrIV:520805-521170 1.8e-11 68_[+1]_2 chrXII:92365-92824 2.9e-11 68_[+1]_2 chrXV:980548-980922 2.9e-11 64_[+1]_6 chrXIV:104654-105072 1.5e-10 26_[+1]_44 chrX:58919-59019 1.5e-10 18_[-1]_52 chrIV:434105-434461 1.5e-10 38_[-1]_32 chrVIII:475544-475949 1.9e-10 17_[-1]_53 chrVII:823313-823698 2.6e-10 62_[+1]_8 chrXIII:420438-420830 2.6e-10 11_[-1]_59 chrXI:308007-308375 2.6e-10 10_[-1]_60 chrXIII:372285-372628 2.6e-10 46_[-1]_24 chrXVI:856732-857128 3.8e-10 56_[+1]_14 chrVII:774167-774604 3.8e-10 48_[+1]_22 chrVIII:146072-146462 3.8e-10 32_[-1]_38 chrX:197189-197289 3.8e-10 32_[-1]_38 chrXV:110832-111160 4.6e-10 23_[-1]_47 chrXVI:622327-622841 4.6e-10 13_[-1]_57 chrVII:440518-440988 4.6e-10 20_[-1]_50 chrXI:578784-579275 8.8e-10 43_[+1]_27 chrIV:619811-620220 2.3e-09 11_[-1]_59 chrV:492199-492597 2.3e-09 11_[-1]_59 chrXII:374169-374606 2.3e-09 52_[+1]_18 chrIV:1095167-1095638 2.9e-09 25_[-1]_45 chrX:374208-374308 3.2e-09 2_[-1]_68 chrX:541373-541473 3.2e-09 66_[+1]_4 chrX:204552-204652 3.2e-09 53_[+1]_17 chrXII:426947-427361 3.2e-09 61_[+1]_9 chrVII:878539-878993 4e-09 1_[-1]_69 chrV:99947-100370 5.1e-09 58_[+1]_12 chrIII:149743-150126 5.1e-09 69_[+1]_1 chrVII:730960-731354 5.5e-09 65_[+1]_5 chrVI:137287-137725 5.5e-09 37_[-1]_33 chrXIV:102534-103014 5.5e-09 27_[+1]_43 chrIV:946124-946601 1.1e-08 50_[+1]_20 chrXV:288004-288441 1.1e-08 70_[+1] chrVII:1004051-1004415 3.5e-08 66_[+1]_4 chrXVI:435748-436144 4.4e-08 4_[-1]_66 chrV:434414-434775 6.3e-08 4_[-1]_66 chrVII:319716-319981 6.3e-08 16_[+1]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK width=30 seqs=69 chrXIII:290619-291053 ( 49) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrV:176925-177363 ( 39) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIV:1017017-1017459 ( 27) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrXVI:210030-210446 ( 12) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrVII:328416-328884 ( 17) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIX:370228-370652 ( 61) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrV:176925-177361 ( 40) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrV:354741-355234 ( 31) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIV:667789-668231 ( 55) TAACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrXII:1051988-1052267 ( 2) TAACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrXVI:880130-880552 ( 13) TAACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrIX:210480-210889 ( 67) TAACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrIII:123435-123804 ( 16) GGTGCGGGAGGTCCCGGGTTCGAGTCCCGG 1 chrIII:151038-151553 ( 47) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrIV:1201576-1202002 ( 46) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrVI:226505-226932 ( 28) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrV:135272-135657 ( 19) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrXVI:581887-582277 ( 65) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrVII:122112-122517 ( 40) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrXVI:860194-860595 ( 68) CCATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrVII:845462-845882 ( 60) CCATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrVI:180722-181220 ( 61) CCATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrII:405694-406172 ( 29) TAATCAGAAGATTATGGGTTCGACCCCCAT 1 chrVII:828476-828983 ( 52) TAATCAGAAGATTATGGGTTCGACCCCCAT 1 chrVII:405394-405713 ( 1) TAATCAGAAGATTATGGGTTCGACCCCCAT 1 chrXI:162283-162728 ( 40) TAATCAGAAGATTATGGGTTCGACCCCCAT 1 chrXII:214769-215107 ( 3) CAAGGAAGAGGTCATCGGTTCGATTCCGGT 1 chrV:138484-138928 ( 44) TAATCAGAAGATTATGGGTTCGACCCCCAT 1 chrVIII:134170-134549 ( 46) TGATCCGGACAACCCCGGTTCGAATCCGGG 1 chrIV:802587-802984 ( 4) TGATCCGGACAACCCCGGTTCGAATCCGGG 1 chrIV:520805-521170 ( 69) TGATCCGGACAACCCCGGTTCGAATCCGGG 1 chrXII:92365-92824 ( 69) CATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrXV:980548-980922 ( 65) CATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrXIV:104654-105072 ( 27) TAATGTGGAGATCATCGGTTCAAATCCGAT 1 chrX:58919-59019 ( 19) TAATGTGGAGATCATCGGTTCAAATCCGAT 1 chrIV:434105-434461 ( 39) TAATGTGGAGATCATCGGTTCAAATCCGAT 1 chrVIII:475544-475949 ( 18) CACGGCAAAGGTCCCGAGTTCGATCCTCGG 1 chrVII:823313-823698 ( 63) CACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrXIII:420438-420830 ( 12) CACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrXI:308007-308375 ( 11) CACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrXIII:372285-372628 ( 47) CACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrXVI:856732-857128 ( 57) CATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrVII:774167-774604 ( 49) CATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrVIII:146072-146462 ( 33) CATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrX:197189-197289 ( 33) CATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrXV:110832-111160 ( 24) CCAAGGTGGGGACACGGGTTCGATTCTCGT 1 chrXVI:622327-622841 ( 14) TTATCTGGAGGTCCTGTGTTCGATCCACAG 1 chrVII:440518-440988 ( 21) TTATCTGGAGGTCCTGTGTTCGATCCACAG 1 chrXI:578784-579275 ( 44) ATACCGAAATGTCAGGGGTTCGAGCCCCCT 1 chrIV:619811-620220 ( 12) GAACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrV:492199-492597 ( 12) GAACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrXII:374169-374606 ( 53) GAACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrIV:1095167-1095638 ( 26) ATATCTGGAGGTCCTGTGTTCGATCCACAG 1 chrX:374208-374308 ( 3) TCGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrX:541373-541473 ( 67) TCGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrX:204552-204652 ( 54) TCGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrXII:426947-427361 ( 62) TCGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrVII:878539-878993 ( 2) CAATCGAAGGGTTGCAGGTTCAATTCCTGT 1 chrV:99947-100370 ( 59) TAACCCTGATGTCCTCGGATCGAAACCGAG 1 chrIII:149743-150126 ( 70) TAACCCTGATGTCCTCGGATCGAAACCGAG 1 chrVII:730960-731354 ( 66) TAATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrVI:137287-137725 ( 38) TAATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrXIV:102534-103014 ( 28) TAATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrIV:946124-946601 ( 51) AAATCTTGAGATCGGGCGTTCGACTCGCCC 1 chrXV:288004-288441 ( 71) AAATCTTGAGATCGGGCGTTCGACTCGCCC 1 chrVII:1004051-1004415 ( 67) TAATGCAAAGGTCGTTAGTTCAATTCTGAC 1 chrXVI:435748-436144 ( 5) AAATCTGTTGGTCCTTAGTTCGATCCTGAG 1 chrV:434414-434775 ( 5) TGGCCGATGAAACCCTGGTTCGATTCTAGG 1 chrVII:319716-319981 ( 17) TGGCCGATGAAACCCTGGTTCGATTCTAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 41606 bayes= 11.0075 E= 1.8e-300 -210 37 -171 101 101 29 -113 -242 125 -139 -113 -161 -441 87 -1 54 -1275 193 53 -1275 -17 -25 99 -72 -72 -213 124 4 23 -171 137 -183 107 -171 53 -441 -61 -91 178 -283 23 -1275 175 -1275 -25 -139 -1275 111 -1275 193 -1275 -17 -3 150 -91 -242 -1275 81 93 -3 -242 87 150 -242 -110 -271 204 -283 -1275 -1275 239 -1275 -342 -1275 -1275 165 -1275 -1275 -1275 169 -1275 239 -1275 -1275 -33 -1275 199 -1275 169 -1275 -1275 -1275 -142 46 -25 58 -342 109 -1275 87 -1275 239 -1275 -1275 -283 196 -271 -72 -342 150 99 -242 -10 93 87 -1275 -242 -113 150 4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 69 E= 1.8e-300 0.072464 0.246377 0.057971 0.623188 0.623188 0.231884 0.086957 0.057971 0.739130 0.072464 0.086957 0.101449 0.014493 0.347826 0.188406 0.449275 0.000000 0.724638 0.275362 0.000000 0.275362 0.159420 0.376812 0.188406 0.188406 0.043478 0.449275 0.318841 0.362319 0.057971 0.492754 0.086957 0.652174 0.057971 0.275362 0.014493 0.202899 0.101449 0.652174 0.043478 0.362319 0.000000 0.637681 0.000000 0.260870 0.072464 0.000000 0.666667 0.000000 0.724638 0.000000 0.275362 0.304348 0.536232 0.101449 0.057971 0.000000 0.333333 0.362319 0.304348 0.057971 0.347826 0.536232 0.057971 0.144928 0.028986 0.782609 0.043478 0.000000 0.000000 1.000000 0.000000 0.028986 0.000000 0.000000 0.971014 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.246377 0.000000 0.753623 0.000000 1.000000 0.000000 0.000000 0.000000 0.115942 0.260870 0.159420 0.463768 0.028986 0.405797 0.000000 0.565217 0.000000 1.000000 0.000000 0.000000 0.043478 0.739130 0.028986 0.188406 0.028986 0.536232 0.376812 0.057971 0.289855 0.362319 0.347826 0.000000 0.057971 0.086957 0.536232 0.318841 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCDKRAGRTCMBSGGTTCGAYYCCSVK MEME-1 regular expression -------------------------------------------------------------------------------- [TC][AC]A[TC][CG][GA][GT][GA][AG][GA][GA][TA][CT][CA][GCT][GC]GGTTC[GA]A[TC][TC]CC[CG][CGA][GT] -------------------------------------------------------------------------------- Time 336.03 secs. ******************************************************************************** ******************************************************************************** MOTIF GSBYNNDTGGYBYAGTGGKWWRAGSS MEME-2 width = 26 sites = 115 llr = 1795 E-value = 7.4e-325 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSBYNNDTGGYBYAGTGGKWWRAGSS MEME-2 Description -------------------------------------------------------------------------------- Simplified A :111223:3:::1a2::::36452:: pos.-specific C :43533::::644:::2::1:12154 probability G 8432234:7a:21:8:6a41142635 matrix T 1133333a::434::93:55311122 bits 2.4 * * 2.2 * * 1.9 * * 1.7 * * * * Relative 1.4 * * * *** * Entropy 1.2 * **** *** * (22.5 bits) 1.0 * **** *** ** 0.7 * ***** ****** * 0.5 ** * ****** ****** * *** 0.2 **** ********************* 0.0 -------------------------- Multilevel GCCCTCGTGGCCTAGTGGTTAAAGCG consensus GGTCTT A TTC A T GATGG GC sequence T GGA G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNNDTGGYBYAGTGGKWWRAGSS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------- chrXVI:856732-857128 + 22 1.50e-11 AACAAGATTC GGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVII:774167-774604 + 14 1.50e-11 TCAATTAATT GGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVIII:146072-146462 - 72 1.50e-11 TCA GGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrX:197189-197289 - 72 1.50e-11 TTA GGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrIX:183316-183700 - 30 4.28e-11 ACAAATTCCT GGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVII:738940-739333 + 36 4.28e-11 GAAAAAAATA GGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:1051988-1052267 - 42 4.28e-11 TCCTTTTCAT GGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXVI:880130-880552 - 53 4.28e-11 ACAATATAAT GGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:443096-443429 - 38 4.28e-11 ATTAAAATTT GGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:734642-734981 + 41 4.28e-11 AACAAAGTTT GGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIX:210480-210889 + 31 4.28e-11 TGAAATATCT GGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVII:794237-794598 + 50 5.22e-11 CATAGATTGC GGGCACATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXII:214769-215107 - 42 5.22e-11 ACGCGTTTTA GGGCACATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXV:274483-274918 + 23 9.33e-11 AAGTAATCGT GTCCCAGTGGCCGAGTGGTTAAGGCG ATGCCCTGCT chrIV:1150716-1151105 - 56 9.33e-11 AAGTGTTTCA GTCCCAGTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXII:784175-784575 + 29 9.33e-11 TTGTTCAACC GTCCCAGTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrV:435646-435997 - 28 6.34e-10 AACAATAAGA GCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1352373-1352676 - 39 6.34e-10 CAACGAAATA GCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1201576-1202002 + 11 6.34e-10 CAAATAAATA GCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVI:226505-226932 - 67 6.34e-10 ATTAAAAT GCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrV:135272-135657 - 58 6.34e-10 CAAGAAAAAA GCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrXVI:581887-582277 + 30 6.34e-10 CAACAAAAGA GCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:122112-122517 + 5 6.34e-10 ATTA GCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:980826-981203 - 66 7.43e-10 GTAAATTGA GGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrII:226928-227289 + 17 7.43e-10 TGTAAAACGA GGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:1305454-1305815 + 46 7.43e-10 TACAAATTAA GGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXV:113625-113982 + 49 1.38e-09 CAGAGATTTA GCTTCTATGGCCAAGTTGGTAAGGCG CCACACTAGT chrX:58919-59019 - 58 1.38e-09 TAAAATAGAA GCTTCTATGGCCAAGTTGGTAAGGCG CCACACTAGT chrX:617739-617839 + 31 2.85e-09 AACAAACAAT GGGAGTTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:592407-592796 - 43 2.85e-09 AACATACAAT GGGAGTTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:731953-732282 + 23 2.85e-09 AACATACAAT GGGAGTTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:92365-92824 + 4 3.76e-09 TAA GGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXIV:567965-568307 + 29 3.76e-09 TAAAATAATC GGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrVI:101196-101560 + 48 3.76e-09 ACAATAATTC GGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXV:300924-301332 + 19 3.76e-09 AGAAAAGATC GGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrI:138971-139357 + 38 3.76e-09 CAATTAGTAC GGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXII:875213-875594 + 23 4.31e-09 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXV:438465-438881 + 20 4.31e-09 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXVI:769060-769493 - 51 4.31e-09 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359398-359811 + 23 4.31e-09 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVI:162046-162383 + 64 5.62e-09 AAGAAAACAA GCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXVI:860194-860595 + 35 5.62e-09 TAAATAACAA GCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:845462-845882 + 27 5.62e-09 TAAATAACAA GCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:226500-226860 - 26 5.62e-09 AAGAAATTCA GCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:281980-282355 + 47 5.62e-09 ACATGAAAGC GCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIII:142611-142953 - 14 5.62e-09 AAGATTACTA GCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:930862-931189 - 23 5.62e-09 TAATCAGTGA GCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:83388-83721 + 44 5.62e-09 AGTTCACTTA GCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXIV:374712-375074 + 26 6.41e-09 AGAAAAATAA GCGGACTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrX:424334-424434 - 20 8.29e-09 TAAATAAGAT GGAGGGTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXII:962876-963238 - 23 8.29e-09 TATTATCGAC GGAGGGTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrVI:157806-158190 - 34 1.20e-08 ATAAATAGAA GCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXVI:622327-622841 - 72 1.20e-08 TAT GCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:358326-358746 - 58 1.20e-08 CAAATAGTAA GCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIII:352098-352451 + 56 1.20e-08 ATGAATATAA GCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:237722-238121 - 43 1.20e-08 CAAATAGTAA GCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVII:823313-823698 + 27 1.36e-08 CAATAAGAGT GGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:420438-420830 - 52 1.36e-08 ACAAATAACA GGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:469282-469620 + 56 1.36e-08 AGAAATAATT GGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:308007-308375 - 51 1.36e-08 ACAATTAAGT GGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:438529-438853 + 59 1.36e-08 CAACAAATTA GGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:586528-586874 - 33 1.36e-08 AACTTACTAT GGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:490768-491158 + 55 1.53e-08 ATAATTCTTG TTCCTCGTGGCCCAATGGTCACGGCG TCTGGCTACG chrX:233753-233853 + 62 1.53e-08 TATATTCTTG TTCCTCGTGGCCCAATGGTCACGGCG TCTGGCTACG chrIV:619811-620220 - 51 1.53e-08 AGAAATCTTG TTCCTCGTGGCCCAATGGTCACGGCG TCTGGCTACG chrV:492199-492597 - 51 1.53e-08 GAACATCCTA TTCCTCGTGGCCCAATGGTCACGGCG TCTGGCTACG chrXII:374169-374606 + 18 1.53e-08 ATAAATCTTG TTCCTCGTGGCCCAATGGTCACGGCG TCTGGCTACG chrIII:127536-127896 + 50 1.73e-08 AAGATAAAAT GACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:594255-594595 - 25 1.73e-08 TGATTGAAAC GCGCAAGTGGTTCAGTGGTTAGAATT TATGCTTCCC chrVII:730960-731354 + 30 1.73e-08 TAGTCAAAAA GACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXVI:810531-810842 + 40 1.73e-08 CATTATTTGC GACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXII:975870-976215 - 39 1.73e-08 GGAAATAAAA GACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXI:74442-74821 + 43 1.73e-08 ATAGCAATTA GACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:976234-976635 + 37 2.18e-08 TATTTTGTGC GCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:422767-422867 + 45 2.18e-08 TCCTTTGTAT GCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXIII:572744-573144 - 36 2.18e-08 ATAACAGATA GCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXII:628198-628654 + 7 5.81e-08 ATAAGT GGTTGTTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXI:84030-84383 + 52 5.81e-08 AAATTTGTAT GGAGGGTTGGCCGAGTGGTCTAATGC GGCAGACTTA chrXV:110832-111160 - 62 8.69e-08 CAATTAACCC GGGCGGTTAGTGTAGTGGTTATCATC CCACCCTTCC chrXI:46639-46980 - 22 8.69e-08 AAATTACTCA GCCCTTTTGGCCAAGTGGTAAGGCAT CGCACTCGTA chrII:326654-327054 - 36 9.58e-08 TCGAGTTCCG GGTCCAATGGTCCAGTGGTTCAAGAC GTCGCCTTTA chrVII:661561-661927 + 55 1.28e-07 GTAAAAATTT GCCTCCTTAGCTTAGTGGTAGAGCGT TGCACTTGTA chrVII:1004051-1004415 + 33 1.28e-07 TCAAGGGTTT GCCTCCTTAGCTTAGTGGTAGAGCGT TGCACTTGTA chrIII:123435-123804 - 54 1.54e-07 TTTCAAAGGA GGGCGTGTGGTCTAGAGGTATGATTC TCGCTTAGGG chrXIV:631730-632094 - 30 1.54e-07 AACTTCTACC GGGCGTGTGGTCTAGAGGTATGATTC TCGCTTAGGG chrIV:1256907-1257258 - 22 1.84e-07 GATCTTCTTA GCGAAAGTGGTTCAGTGGTTAGAATT CATGCTTCCC chrIV:645033-645393 - 36 2.01e-07 CAGTTGTTAC GGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrXIII:808107-808524 - 27 2.01e-07 AGAAGAAAAA GGTCCTATAGTGTAGTGGTTATCACT TTCGGTTCTG chrIII:168171-168561 - 31 2.01e-07 AAGAAGTCCT GGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrVIII:134170-134549 + 12 2.01e-07 AGTAAGTTCC GGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:802587-802984 - 42 2.01e-07 ATGAATTGTC GGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:520805-521170 + 35 2.01e-07 TCCATTTTAG GGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrII:642905-643247 - 27 2.20e-07 GTAATAGAAA GCTCGTATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrXVI:775645-776010 - 34 2.20e-07 TAATTCAAAA GCTCGTATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrXVI:435748-436144 - 43 2.20e-07 TACAACAAAA GCTCGTATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrXIII:747789-748130 - 29 3.96e-07 CATATGACTA GCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrV:138484-138928 + 10 3.96e-07 ATAAATAAT GCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrV:130967-131335 - 27 4.64e-07 ATAATTAAGA GGTTTTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrX:374208-374308 - 41 1.20e-06 CTTTGTTTCT TCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrXI:513226-513583 - 24 1.20e-06 CAAATAACGT TCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrXV:571778-572140 + 49 1.20e-06 ACAATTAAAA TCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrX:541373-541473 + 33 1.20e-06 AGAAAGAAAA TCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrX:355196-355296 + 48 1.20e-06 CTTTGTTTCT TCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrX:204552-204652 + 20 1.20e-06 AACATAAAAA TCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrXII:426947-427361 + 28 1.20e-06 GTGTTTCTTA TCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrXV:989045-989456 - 49 1.46e-06 TAGCTATGAC GTTTGGGTGGCCTAGCCGGTTCGCGT GTGCCTGTCG chrVI:210503-210882 - 40 2.26e-06 ACAAAAACGA CTCTCGGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXV:288004-288441 + 20 2.26e-06 AAAATAGCTT CTCTCGGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrX:542829-542929 - 43 2.26e-06 CAATTAAATA CTCTCGGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrVII:878539-878993 - 74 3.02e-06 T GAAGCGGTGGCTCAATGGTAGAGCTT TCGACTCCAA chrX:415837-415937 - 35 3.02e-06 AACAAAAGTT GAAGCGGTGGCTCAATGGTAGAGCTT TCGACTCCAA chrXIII:379202-379587 - 39 3.02e-06 AATAAAAGTT GAAGCGGTGGCTCAATGGTAGAGCTT TCGACTCCAA chrVII:287203-287635 - 61 3.02e-06 ATTTCAAGAT GAAGCGGTGGCTCAATGGTAGAGCTT TCGACTCCAA chrVIII:475544-475949 - 57 7.80e-06 TTAAAAGTCT GTTCCAATAGTGTAGCGGCTATCACG TTGCCTTCAC chrII:605720-606132 - 41 1.05e-05 AAAAAAGGGT GTGGTGATGGTGAAGATGTACAGGTG TAAAACTGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNNDTGGYBYAGTGGKWWRAGSS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:856732-857128 1.5e-11 21_[+2]_53 chrVII:774167-774604 1.5e-11 13_[+2]_61 chrVIII:146072-146462 1.5e-11 71_[-2]_3 chrX:197189-197289 1.5e-11 71_[-2]_3 chrIX:183316-183700 4.3e-11 29_[-2]_45 chrVII:738940-739333 4.3e-11 35_[+2]_39 chrXII:1051988-1052267 4.3e-11 41_[-2]_33 chrXVI:880130-880552 4.3e-11 52_[-2]_22 chrV:443096-443429 4.3e-11 37_[-2]_37 chrXII:734642-734981 4.3e-11 40_[+2]_34 chrIX:210480-210889 4.3e-11 30_[+2]_44 chrVII:794237-794598 5.2e-11 49_[+2]_25 chrXII:214769-215107 5.2e-11 41_[-2]_33 chrXV:274483-274918 9.3e-11 22_[+2]_52 chrIV:1150716-1151105 9.3e-11 55_[-2]_19 chrXII:784175-784575 9.3e-11 28_[+2]_46 chrV:435646-435997 6.3e-10 27_[-2]_47 chrIV:1352373-1352676 6.3e-10 38_[-2]_36 chrIV:1201576-1202002 6.3e-10 10_[+2]_64 chrVI:226505-226932 6.3e-10 66_[-2]_8 chrV:135272-135657 6.3e-10 57_[-2]_17 chrXVI:581887-582277 6.3e-10 29_[+2]_45 chrVII:122112-122517 6.3e-10 4_[+2]_70 chrIV:980826-981203 7.4e-10 65_[-2]_9 chrII:226928-227289 7.4e-10 16_[+2]_58 chrIV:1305454-1305815 7.4e-10 45_[+2]_29 chrXV:113625-113982 1.4e-09 48_[+2]_26 chrX:58919-59019 1.4e-09 57_[-2]_17 chrX:617739-617839 2.8e-09 30_[+2]_44 chrXII:592407-592796 2.8e-09 42_[-2]_32 chrXII:731953-732282 2.8e-09 22_[+2]_52 chrXII:92365-92824 3.8e-09 3_[+2]_71 chrXIV:567965-568307 3.8e-09 28_[+2]_46 chrVI:101196-101560 3.8e-09 47_[+2]_27 chrXV:300924-301332 3.8e-09 18_[+2]_56 chrI:138971-139357 3.8e-09 37_[+2]_37 chrXII:875213-875594 4.3e-09 22_[+2]_52 chrXV:438465-438881 4.3e-09 19_[+2]_55 chrXVI:769060-769493 4.3e-09 50_[-2]_24 chrIV:359398-359811 4.3e-09 22_[+2]_52 chrVI:162046-162383 5.6e-09 63_[+2]_11 chrXVI:860194-860595 5.6e-09 34_[+2]_40 chrVII:845462-845882 5.6e-09 26_[+2]_48 chrXV:226500-226860 5.6e-09 25_[-2]_49 chrXV:281980-282355 5.6e-09 46_[+2]_28 chrIII:142611-142953 5.6e-09 13_[-2]_61 chrVII:930862-931189 5.6e-09 22_[-2]_52 chrIV:83388-83721 5.6e-09 43_[+2]_31 chrXIV:374712-375074 6.4e-09 25_[+2]_49 chrX:424334-424434 8.3e-09 19_[-2]_55 chrXII:962876-963238 8.3e-09 22_[-2]_52 chrVI:157806-158190 1.2e-08 33_[-2]_41 chrXVI:622327-622841 1.2e-08 71_[-2]_3 chrVIII:358326-358746 1.2e-08 57_[-2]_17 chrXIII:352098-352451 1.2e-08 55_[+2]_19 chrVIII:237722-238121 1.2e-08 42_[-2]_32 chrVII:823313-823698 1.4e-08 26_[+2]_48 chrXIII:420438-420830 1.4e-08 51_[-2]_23 chrV:469282-469620 1.4e-08 55_[+2]_19 chrXI:308007-308375 1.4e-08 50_[-2]_24 chrV:438529-438853 1.4e-08 58_[+2]_16 chrXIII:586528-586874 1.4e-08 32_[-2]_42 chrXI:490768-491158 1.5e-08 54_[+2]_20 chrX:233753-233853 1.5e-08 61_[+2]_13 chrIV:619811-620220 1.5e-08 50_[-2]_24 chrV:492199-492597 1.5e-08 50_[-2]_24 chrXII:374169-374606 1.5e-08 17_[+2]_57 chrIII:127536-127896 1.7e-08 49_[+2]_25 chrXV:594255-594595 1.7e-08 24_[-2]_50 chrVII:730960-731354 1.7e-08 29_[+2]_45 chrXVI:810531-810842 1.7e-08 39_[+2]_35 chrXII:975870-976215 1.7e-08 38_[-2]_36 chrXI:74442-74821 1.7e-08 42_[+2]_32 chrXV:976234-976635 2.2e-08 36_[+2]_38 chrX:422767-422867 2.2e-08 44_[+2]_30 chrXIII:572744-573144 2.2e-08 35_[-2]_39 chrXII:628198-628654 5.8e-08 6_[+2]_68 chrXI:84030-84383 5.8e-08 51_[+2]_23 chrXV:110832-111160 8.7e-08 61_[-2]_13 chrXI:46639-46980 8.7e-08 21_[-2]_53 chrII:326654-327054 9.6e-08 35_[-2]_39 chrVII:661561-661927 1.3e-07 54_[+2]_20 chrVII:1004051-1004415 1.3e-07 32_[+2]_42 chrIII:123435-123804 1.5e-07 53_[-2]_21 chrXIV:631730-632094 1.5e-07 29_[-2]_45 chrIV:1256907-1257258 1.8e-07 21_[-2]_53 chrIV:645033-645393 2e-07 35_[-2]_39 chrXIII:808107-808524 2e-07 26_[-2]_48 chrIII:168171-168561 2e-07 30_[-2]_44 chrVIII:134170-134549 2e-07 11_[+2]_63 chrIV:802587-802984 2e-07 41_[-2]_33 chrIV:520805-521170 2e-07 34_[+2]_40 chrII:642905-643247 2.2e-07 26_[-2]_48 chrXVI:775645-776010 2.2e-07 33_[-2]_41 chrXVI:435748-436144 2.2e-07 42_[-2]_32 chrXIII:747789-748130 4e-07 28_[-2]_46 chrV:138484-138928 4e-07 9_[+2]_65 chrV:130967-131335 4.6e-07 26_[-2]_48 chrX:374208-374308 1.2e-06 40_[-2]_34 chrXI:513226-513583 1.2e-06 23_[-2]_51 chrXV:571778-572140 1.2e-06 48_[+2]_26 chrX:541373-541473 1.2e-06 32_[+2]_42 chrX:355196-355296 1.2e-06 47_[+2]_27 chrX:204552-204652 1.2e-06 19_[+2]_55 chrXII:426947-427361 1.2e-06 27_[+2]_47 chrXV:989045-989456 1.5e-06 48_[-2]_26 chrVI:210503-210882 2.3e-06 39_[-2]_35 chrXV:288004-288441 2.3e-06 19_[+2]_55 chrX:542829-542929 2.3e-06 42_[-2]_32 chrVII:878539-878993 3e-06 73_[-2]_1 chrX:415837-415937 3e-06 34_[-2]_40 chrXIII:379202-379587 3e-06 38_[-2]_36 chrVII:287203-287635 3e-06 60_[-2]_14 chrVIII:475544-475949 7.8e-06 56_[-2]_18 chrII:605720-606132 1e-05 40_[-2]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNNDTGGYBYAGTGGKWWRAGSS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSBYNNDTGGYBYAGTGGKWWRAGSS width=26 seqs=115 chrXVI:856732-857128 ( 22) GGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrVII:774167-774604 ( 14) GGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrVIII:146072-146462 ( 72) GGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrX:197189-197289 ( 72) GGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrIX:183316-183700 ( 30) GGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrVII:738940-739333 ( 36) GGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrXII:1051988-1052267 ( 42) GGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrXVI:880130-880552 ( 53) GGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrV:443096-443429 ( 38) GGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrXII:734642-734981 ( 41) GGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrIX:210480-210889 ( 31) GGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrVII:794237-794598 ( 50) GGGCACATGGCGCAGTTGGTAGCGCG 1 chrXII:214769-215107 ( 42) GGGCACATGGCGCAGTTGGTAGCGCG 1 chrXV:274483-274918 ( 23) GTCCCAGTGGCCGAGTGGTTAAGGCG 1 chrIV:1150716-1151105 ( 56) GTCCCAGTGGCCGAGTGGTTAAGGCG 1 chrXII:784175-784575 ( 29) GTCCCAGTGGCCGAGTGGTTAAGGCG 1 chrV:435646-435997 ( 28) GCCTTGTTGGCGCAATCGGTAGCGCG 1 chrIV:1352373-1352676 ( 39) GCCTTGTTGGCGCAATCGGTAGCGCG 1 chrIV:1201576-1202002 ( 11) GCCTTGTTGGCGCAATCGGTAGCGCG 1 chrVI:226505-226932 ( 67) GCCTTGTTGGCGCAATCGGTAGCGCG 1 chrV:135272-135657 ( 58) GCCTTGTTGGCGCAATCGGTAGCGCG 1 chrXVI:581887-582277 ( 30) GCCTTGTTGGCGCAATCGGTAGCGCG 1 chrVII:122112-122517 ( 5) GCCTTGTTGGCGCAATCGGTAGCGCG 1 chrIV:980826-981203 ( 66) GGCAACTTGGCCGAGTGGTTAAGGCG 1 chrII:226928-227289 ( 17) GGCAACTTGGCCGAGTGGTTAAGGCG 1 chrIV:1305454-1305815 ( 46) GGCAACTTGGCCGAGTGGTTAAGGCG 1 chrXV:113625-113982 ( 49) GCTTCTATGGCCAAGTTGGTAAGGCG 1 chrX:58919-59019 ( 58) GCTTCTATGGCCAAGTTGGTAAGGCG 1 chrX:617739-617839 ( 31) GGGAGTTTGGCCGAGTGGTTTAAGGC 1 chrXII:592407-592796 ( 43) GGGAGTTTGGCCGAGTGGTTTAAGGC 1 chrXII:731953-732282 ( 23) GGGAGTTTGGCCGAGTGGTTTAAGGC 1 chrXII:92365-92824 ( 4) GGGCGTGTGGTCTAGTGGTATGATTC 1 chrXIV:567965-568307 ( 29) GGGCGTGTGGTCTAGTGGTATGATTC 1 chrVI:101196-101560 ( 48) GGGCGTGTGGTCTAGTGGTATGATTC 1 chrXV:300924-301332 ( 19) GGGCGTGTGGTCTAGTGGTATGATTC 1 chrI:138971-139357 ( 38) GGGCGTGTGGTCTAGTGGTATGATTC 1 chrXII:875213-875594 ( 23) TCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrXV:438465-438881 ( 20) TCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrXVI:769060-769493 ( 51) TCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrIV:359398-359811 ( 23) TCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrVI:162046-162383 ( 64) GCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXVI:860194-860595 ( 35) GCGCAAGTGGTTTAGTGGTAAAATCC 1 chrVII:845462-845882 ( 27) GCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXV:226500-226860 ( 26) GCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXV:281980-282355 ( 47) GCGCAAGTGGTTTAGTGGTAAAATCC 1 chrIII:142611-142953 ( 14) GCGCAAGTGGTTTAGTGGTAAAATCC 1 chrVII:930862-931189 ( 23) GCGCAAGTGGTTTAGTGGTAAAATCC 1 chrIV:83388-83721 ( 44) GCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXIV:374712-375074 ( 26) GCGGACTTAGCTCAGTTGGGAGAGCG 1 chrX:424334-424434 ( 20) GGAGGGTTGGCCGAGTGGTCTAAGGC 1 chrXII:962876-963238 ( 23) GGAGGGTTGGCCGAGTGGTCTAAGGC 1 chrVI:157806-158190 ( 34) GCGGATTTAGCTCAGTTGGGAGAGCG 1 chrXVI:622327-622841 ( 72) GCGGATTTAGCTCAGTTGGGAGAGCG 1 chrVIII:358326-358746 ( 58) GCGGATTTAGCTCAGTTGGGAGAGCG 1 chrXIII:352098-352451 ( 56) GCGGATTTAGCTCAGTTGGGAGAGCG 1 chrVIII:237722-238121 ( 43) GCGGATTTAGCTCAGTTGGGAGAGCG 1 chrVII:823313-823698 ( 27) GGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXIII:420438-420830 ( 52) GGTTTCGTGGTCTAGTCGGTTATGGC 1 chrV:469282-469620 ( 56) GGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXI:308007-308375 ( 51) GGTTTCGTGGTCTAGTCGGTTATGGC 1 chrV:438529-438853 ( 59) GGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXIII:586528-586874 ( 33) GGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXI:490768-491158 ( 55) TTCCTCGTGGCCCAATGGTCACGGCG 1 chrX:233753-233853 ( 62) TTCCTCGTGGCCCAATGGTCACGGCG 1 chrIV:619811-620220 ( 51) TTCCTCGTGGCCCAATGGTCACGGCG 1 chrV:492199-492597 ( 51) TTCCTCGTGGCCCAATGGTCACGGCG 1 chrXII:374169-374606 ( 18) TTCCTCGTGGCCCAATGGTCACGGCG 1 chrIII:127536-127896 ( 50) GACTCCATGGCCAAGTTGGTTAAGGC 1 chrXV:594255-594595 ( 25) GCGCAAGTGGTTCAGTGGTTAGAATT 1 chrVII:730960-731354 ( 30) GACTCCATGGCCAAGTTGGTTAAGGC 1 chrXVI:810531-810842 ( 40) GACTCCATGGCCAAGTTGGTTAAGGC 1 chrXII:975870-976215 ( 39) GACTCCATGGCCAAGTTGGTTAAGGC 1 chrXI:74442-74821 ( 43) GACTCCATGGCCAAGTTGGTTAAGGC 1 chrXV:976234-976635 ( 37) GCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrX:422767-422867 ( 45) GCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrXIII:572744-573144 ( 36) GCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrXII:628198-628654 ( 7) GGTTGTTTGGCCGAGCGGTCTAAGGC 1 chrXI:84030-84383 ( 52) GGAGGGTTGGCCGAGTGGTCTAATGC 1 chrXV:110832-111160 ( 62) GGGCGGTTAGTGTAGTGGTTATCATC 1 chrXI:46639-46980 ( 22) GCCCTTTTGGCCAAGTGGTAAGGCAT 1 chrII:326654-327054 ( 36) GGTCCAATGGTCCAGTGGTTCAAGAC 1 chrVII:661561-661927 ( 55) GCCTCCTTAGCTTAGTGGTAGAGCGT 1 chrVII:1004051-1004415 ( 33) GCCTCCTTAGCTTAGTGGTAGAGCGT 1 chrIII:123435-123804 ( 54) GGGCGTGTGGTCTAGAGGTATGATTC 1 chrXIV:631730-632094 ( 30) GGGCGTGTGGTCTAGAGGTATGATTC 1 chrIV:1256907-1257258 ( 22) GCGAAAGTGGTTCAGTGGTTAGAATT 1 chrIV:645033-645393 ( 36) GGTCCTATAGTGTAGTGGTTATCACT 1 chrXIII:808107-808524 ( 27) GGTCCTATAGTGTAGTGGTTATCACT 1 chrIII:168171-168561 ( 31) GGTCCTATAGTGTAGTGGTTATCACT 1 chrVIII:134170-134549 ( 12) GGTCCTATAGTGTAGTGGTTATCACT 1 chrIV:802587-802984 ( 42) GGTCCTATAGTGTAGTGGTTATCACT 1 chrIV:520805-521170 ( 35) GGTCCTATAGTGTAGTGGTTATCACT 1 chrII:642905-643247 ( 27) GCTCGTATGGCGCAGTGGTAGCGCAG 1 chrXVI:775645-776010 ( 34) GCTCGTATGGCGCAGTGGTAGCGCAG 1 chrXVI:435748-436144 ( 43) GCTCGTATGGCGCAGTGGTAGCGCAG 1 chrXIII:747789-748130 ( 29) GCTCGCGTGGCGTAATGGCAACGCGT 1 chrV:138484-138928 ( 10) GCTCGCGTGGCGTAATGGCAACGCGT 1 chrV:130967-131335 ( 27) GGTTTTATAGTGTAGTGGTTATCACT 1 chrX:374208-374308 ( 41) TCCGTGATAGTTTAATGGTCAGAATG 1 chrXI:513226-513583 ( 24) TCCGTGATAGTTTAATGGTCAGAATG 1 chrXV:571778-572140 ( 49) TCCGTGATAGTTTAATGGTCAGAATG 1 chrX:541373-541473 ( 33) TCCGTGATAGTTTAATGGTCAGAATG 1 chrX:355196-355296 ( 48) TCCGTGATAGTTTAATGGTCAGAATG 1 chrX:204552-204652 ( 20) TCCGTGATAGTTTAATGGTCAGAATG 1 chrXII:426947-427361 ( 28) TCCGTGATAGTTTAATGGTCAGAATG 1 chrXV:989045-989456 ( 49) GTTTGGGTGGCCTAGCCGGTTCGCGT 1 chrVI:210503-210882 ( 40) CTCTCGGTAGCCAAGTTGGTTTAAGG 1 chrXV:288004-288441 ( 20) CTCTCGGTAGCCAAGTTGGTTTAAGG 1 chrX:542829-542929 ( 43) CTCTCGGTAGCCAAGTTGGTTTAAGG 1 chrVII:878539-878993 ( 74) GAAGCGGTGGCTCAATGGTAGAGCTT 1 chrX:415837-415937 ( 35) GAAGCGGTGGCTCAATGGTAGAGCTT 1 chrXIII:379202-379587 ( 39) GAAGCGGTGGCTCAATGGTAGAGCTT 1 chrVII:287203-287635 ( 61) GAAGCGGTGGCTCAATGGTAGAGCTT 1 chrVIII:475544-475949 ( 57) GTTCCAATAGTGTAGCGGCTATCACG 1 chrII:605720-606132 ( 41) GTGGTGATGGTGAAGATGTACAGGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNNDTGGYBYAGTGGKWWRAGSS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 26 n= 43950 bayes= 10.2605 E= 7.4e-325 -1349 -287 213 -115 -198 110 104 -135 -235 87 64 -7 -235 125 -6 -3 -76 46 19 13 -98 59 50 -11 -30 -1349 113 9 -1349 -1349 -1349 169 -7 -1349 189 -1349 -1349 -1349 239 -1349 -1349 176 -1349 20 -1349 122 36 2 -157 101 -75 37 169 -1349 -1349 -1349 -51 -1349 204 -1349 -357 -287 -1349 161 -357 -28 155 -25 -1349 -1349 239 -1349 -1349 -287 119 80 -20 -45 -187 80 93 -345 -128 2 46 -99 98 -157 75 1 30 -257 -76 -75 157 -115 -283 133 59 -70 -1349 94 130 -91 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNNDTGGYBYAGTGGKWWRAGSS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 26 nsites= 115 E= 7.4e-325 0.000000 0.026087 0.834783 0.139130 0.078261 0.408696 0.391304 0.121739 0.060870 0.347826 0.295652 0.295652 0.060870 0.452174 0.182609 0.304348 0.182609 0.260870 0.217391 0.339130 0.156522 0.286957 0.269565 0.286957 0.252174 0.000000 0.417391 0.330435 0.000000 0.000000 0.000000 1.000000 0.295652 0.000000 0.704348 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.643478 0.000000 0.356522 0.000000 0.443478 0.243478 0.313043 0.104348 0.382609 0.113043 0.400000 1.000000 0.000000 0.000000 0.000000 0.217391 0.000000 0.782609 0.000000 0.026087 0.026087 0.000000 0.947826 0.026087 0.156522 0.556522 0.260870 0.000000 0.000000 1.000000 0.000000 0.000000 0.026087 0.434783 0.539130 0.269565 0.139130 0.052174 0.539130 0.591304 0.017391 0.078261 0.313043 0.426087 0.095652 0.373913 0.104348 0.521739 0.191304 0.234783 0.052174 0.182609 0.113043 0.565217 0.139130 0.043478 0.478261 0.286957 0.191304 0.000000 0.365217 0.469565 0.165217 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNNDTGGYBYAGTGGKWWRAGSS MEME-2 regular expression -------------------------------------------------------------------------------- G[CG][CGT][CT][TCG][CTG][GTA]T[GA]G[CT][CTG][TC]A[GA]T[GT]G[TG][TA][AT][AG][AG]G[CG][GC] -------------------------------------------------------------------------------- Time 643.28 secs. ******************************************************************************** ******************************************************************************** MOTIF RRTGTAYGGRTGT MEME-3 width = 13 sites = 131 llr = 1387 E-value = 1.2e-133 ******************************************************************************** -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 36:::811:5::1 pos.-specific C ::::215::::12 probability G 541a:1:9a5:81 matrix T 2:9:8:5:::915 bits 2.4 * 2.2 * * 1.9 * ** 1.7 * ** Relative 1.4 * ** * Entropy 1.2 ** ** ** (15.3 bits) 1.0 *** ***** 0.7 *********** 0.5 ************ 0.2 ************* 0.0 ------------- Multilevel GATGTATGGGTGT consensus AG C C A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------- chrIV:221973-222315 + 41 1.28e-08 ATGAGATAAG GGTGTACGGGTGT GGTAACCGTC chrVIII:382920-383344 + 19 4.15e-08 TTATTTTCAT GATGTATGGGTGT CTCGGATGTT chrXII:932098-932493 + 22 6.24e-08 CAGATGTACA GATGTACGGATGT ACGGATGTAT chrVIII:125928-126296 - 40 9.58e-08 TAAAGATGTA GGTGTACGGATGC ATTAACGTCT chrXIII:145908-146263 - 49 1.56e-07 TATGGTGTAT GGTGTATGGATGT ACAAAAATGC chrII:89629-89964 + 55 1.56e-07 TGTTAAAGAG GGTGTATGGATGT AAAGTCACAA chrX:157464-157564 + 3 1.56e-07 GA GATGTATGGATGT ATAAAGTGTA chrXI:614218-614320 - 84 1.76e-07 TTGT GGTGTGCGGGTGT TGCAGTCATT chrI:81950-82269 + 51 1.97e-07 ATCTAGCGGA GGTGCACGGATGT ACCAACAGTT chrIII:58762-58929 - 76 1.97e-07 TTTCAGAAAT GGTGCACGGATGT ACCCACGCAA chrVII:149129-149519 + 44 2.38e-07 TGTATGGGTG GGTGTATGGATGC TGTAAGCACA chrXII:922118-922549 - 62 3.06e-07 AGAATTGGAA TATGTACGGGTGT CAATTTCAAA chrVI:64982-65332 + 60 3.06e-07 TATCTCTGAA TATGTACGGGTGT TGACATGGAG chrX:703260-703360 + 58 3.06e-07 ATAAATAGTG GATGCATGGGTGC TTCCACGCGT chrIV:1355741-1355977 + 30 3.06e-07 AAATACTATA AATGTATGGGTGT AATTTTAACC chrIX:68211-68506 - 42 3.73e-07 ACATCTTAGT AATGTACGGATGT AATAAACTCA chrXVI:378673-378933 + 87 3.73e-07 TGAGAACTCG AATGTACGGATGT T chrXVI:76353-76721 + 56 3.73e-07 CACATCCGTG GATGTACGGGTGA AAATACAGTC chrXI:108749-109074 - 60 3.73e-07 GAGCCAACTA AATGTACGGATGT TGTAATGTGT chrV:396220-396556 - 41 3.73e-07 GGTTCACAAA AGTGTACGGATGT ATACAACAGG chrIV:1359392-1359792 - 54 3.73e-07 ATGGGTGCGT AATGTACGGATGT TTAATGTCTT chrXIII:225359-225716 - 58 3.73e-07 TAAAAAATAG AATGTACGGATGT AATGCACGGA chrXIII:732044-732397 - 36 4.38e-07 ACACATGCGC GATGTGCGGATGT ATTATGTCTT chrV:68964-69466 + 15 4.38e-07 GAAGCTTTGT GGGGTACGGGTGC ATGCTCGGCT chrII:181362-181609 - 60 5.02e-07 TATTCAATGT AATGTATGGGTGC TTTGTAAAGG chrII:45006-45343 - 46 5.82e-07 ACATACATAG AATGTACGGATGC ATGATTGTCT chrVI:95469-95881 + 11 5.82e-07 TACGCAATCC GGTGTGTGGGTGC ATGACTGATT chrXVI:794516-794786 - 54 5.82e-07 ATAATATAAA TATGTATGGGTGT TTGGAGATGT chrXV:1028671-1029106 + 69 5.82e-07 AAACAAATCA AATGTACGGATGC ACAATGGTAA chrXII:241630-241997 - 44 7.26e-07 TTACATTTTA TATGTACGGATGT AAAAAGGGAA chrXII:818835-819155 - 54 7.26e-07 CAACTATCAA TATGTACGGATGT TTAAAAGGTA chrXV:678837-679171 + 56 7.26e-07 GGGTCCACAA TATGTACGGATGT ATGGTCCCAA chrXII:713138-713568 + 69 7.26e-07 TTTTTATACA TATGTACGGATGT GATAGTCTGC chrXV:92933-93310 + 41 7.26e-07 GAACGTCACA TGTGTACGGATGT AGTTGTGTCA chrVI:223921-224192 + 51 7.26e-07 GGTCTAAGAG TATGTACGGATGT AAAAGAAAAC chrXII:262815-263080 - 68 7.26e-07 AATTAACATA AATGTATGGATGT ATTATTAAAT chrXII:522159-522420 - 64 7.26e-07 GAAAACCTTT TGTGTACGGATGT TTAGTTAATA chrIV:1300948-1301323 - 24 9.52e-07 AAACATCCAC AGTGCACGGATGT TTGAAGGAAA chrXII:710632-710899 - 18 9.52e-07 CGCAAAATGA GATGCGTGGGTGT GATTCCTGCT chrIII:163440-163893 + 31 1.39e-06 GCCGCGGTTG GGTGCGTGGGTGC GGTAATTTAA chrVI:221750-222072 + 59 1.39e-06 GGGTGTTAAA AATGTACGGGTGA AAAAAGTCTT chrXV:901347-901757 + 38 1.39e-06 GGAAACGTAA AATGTACGGGTGA ACAGTCCCGA chrXII:781465-781860 + 44 1.39e-06 GGTTTATGAA AATGCACGGATGC ATTTTCTCTA chrVII:534807-535220 + 41 1.39e-06 GGGTTACACA AATGCACGGATGC ATATATAAAA chrXII:1028204-1028564 - 64 1.57e-06 CATACATTTT GGTGCATGGGTGA TATTTTGTCT chrVIII:148947-149262 + 28 1.57e-06 ATAATTCAAT GGTGCATGGGTGA AAATGTATGG chrXV:167975-168464 - 38 1.75e-06 TTCTCAATGT GATGTGTGGGTGG CTTTGAACAC chrIV:541754-542122 - 56 1.75e-06 AATACCCGAA GATGTAAGGATGT TTTTGTTCCT chrIV:341268-341606 + 56 1.75e-06 TGGGTGTTAA AATGTACGGATGG AAAAGTAGAC chrIV:411256-411640 - 37 1.89e-06 TTGGGTGCCC GGGGTGTGGGTGT TTGATTTGTT chrIX:382203-382399 + 35 1.89e-06 CGCTTTCGGT AATGTGTGGGTGC GGTACCGTTA chrIII:78257-78802 + 63 1.89e-06 AATGCCGTGG GAGGCACGGATGC AAGATTTCTC chrIX:254232-254544 + 20 1.89e-06 CGGCAATTAG AATGTGTGGGTGC GGAAGCTCGC chrXV:1004091-1004419 + 42 1.89e-06 GTATGTTATG GGTGCAAGGGTGT TTTTTTTTTT chrXVI:406212-406547 - 42 1.89e-06 TGGAGGTGGA AAGGTACGGATGT TAAACTTCAT chrIV:538969-539216 - 63 1.89e-06 GATTGAATGA GGGGTGTGGGTGT GATAATTCAT chrVII:366051-366490 + 17 2.13e-06 GATTTATAAA TATGTGTGGGTGT TTATATGATC chrVIII:175062-175380 - 11 2.13e-06 GGAGTTTCAT GATGTATGGGTCT CAGCATTGCG chrXVI:829079-829372 + 46 2.47e-06 TTGACCGGAT GATGTAAGGATGC ATGTCCCTAC chrXVI:302688-302975 - 48 2.47e-06 GGTGTTTTAG GATGTCTGGATGT ACAAGTTAGC chrXII:48710-49078 + 59 2.47e-06 GGGTGTCTAA GATGTACGGATCT TCATTGGGAT chrXIII:754424-754768 + 26 2.47e-06 CGCTATTCTG GATGTATGGGGGT ATTTTATGTC chrV:140467-140908 + 38 2.47e-06 GGCATTGTAA AAGGTATGGGTGC TTTGTGCGTC chrXIV:444464-444772 + 53 2.47e-06 CGGATTTAAA GAGGTACGGATGG AGACCGTAGA chrXII:234639-234791 + 38 2.47e-06 GTTTTTAAGG AAGGTATGGGTGC AGTGTGCTTA chrVII:438593-438902 + 61 2.74e-06 AACGTTCCAA AATGTATGGATGG TAAGGTCTTT chrV:423108-423466 - 35 2.74e-06 GGGTGTAGAA GGTGTACGGAGGT AAATATGCAG chrXVI:281581-281883 - 84 2.74e-06 AGGA AGTGTAAGGGTGT AAAGAGGTAA chrXII:282507-282891 - 8 3.00e-06 GGAGGGAAAA GATGTACAGGTGT AAAAAAG chrI:141619-142062 - 57 4.15e-06 ACGTGTGCGC GGTGTGTGGATGA TGGTTTCATC chrXVI:188599-188958 - 62 4.15e-06 CATAGTAACC GATGCATGGGTTT TAAAAGTCAC chrXII:673823-674233 - 76 4.15e-06 ATCAATATCT GGTGCATGGGTCT AAAAAAATTA chrXI:618805-619208 + 55 4.57e-06 AAATCTGTTA GAGGCACGGATGG AAATAGTATT chrII:60830-61255 + 81 5.01e-06 AGCAGTTGGG GGTGTACAGATGT TAATGTA chrXII:498517-498874 - 28 5.01e-06 TTCCTTACAG GATGCACGGAGGT AAACAGGAAA chrIV:217172-217524 - 16 5.01e-06 TATAGAATAA AATGTACGGGTTC AAAGCAGGGC chrXII:903426-903640 - 39 5.55e-06 TAATGCATGT GGTGCATGGGTCC AATGCTTCTA chrXII:1012090-1012397 - 45 5.55e-06 ATTTGCGTGT GGTGCATGGGTTC TATTCCTCAT chrXV:882097-882507 - 46 5.55e-06 GGAAATATGC GGTGCACAGGTGT TTTTATAGGG chrIV:308025-308385 - 69 6.82e-06 TGCCTACATA TATGTAAGGATGT AACAGGAAAT chrIV:1401266-1401585 - 58 6.82e-06 AAGGGTAATA TATGTGTGGGTGG AAAATGATTG chrIX:316132-316589 - 42 7.53e-06 TTTGTAAAAT AATGTATGGGTTC TAGTCTGAAA chrXIII:650763-651173 - 63 7.53e-06 AAAACTGTGA AATGTACAGGTGT AAAACAGTCT chrVII:856733-856982 + 57 7.53e-06 CCATTGGTGC GGTGTATGGGCGG GTACCCTCAA chrXV:1025758-1025995 - 50 7.53e-06 AATTACACGT GATGAATGGGTGT TCAGCATATG chrV:522694-523104 - 53 7.53e-06 AGGCTTATGG GGTGTATGGGCGG GGGAAATAGG chrXV:505124-505494 - 35 8.23e-06 TAAGGTTCAT TGTGTATGGGTTT GAAATGAATG chrXV:216250-216684 - 42 8.23e-06 TGGGTTGAGG AAGGCGCGGGTGC TCGGATGTTC chrIV:117178-117582 - 40 8.23e-06 TGGGTGTAGA TATGTATGGGTCT GAGATTAATA chrII:165028-165517 - 35 9.13e-06 GCTCTAACGC GGTGTATGGGTTA GATTCGTAAT chrXV:253819-254097 + 70 1.01e-05 TTATACGCGC GGTGTACGGATTA AAAAAGTTTT chrIV:1492557-1492967 + 48 1.01e-05 TAAAGTGAGA TGTGCATGGATGA ATTATCCATG chrXV:391593-391846 - 47 1.12e-05 TTTATGCCGG GGTGTACGTATGT TAATCAGTTA chrXIV:63127-63538 + 36 1.12e-05 GGGTTGCTAA AATGTTCGGATGT AAAGTAGTAT chrII:332317-332729 - 52 1.12e-05 TGGGTTTAGA ATTGTATGGGTGC AGCAAGGAAA chrIV:1450891-1451240 + 68 1.12e-05 AAAATACAAA TATGTACAGGTGT TAATGTCTAA chrXV:968035-968435 + 84 1.23e-05 AAAAGCGTGG GGTGCGTGGGCGT GCGC chrXV:866564-866930 + 59 1.23e-05 GCATTCTGGG TTTGTATGGGTGT TACACCGGTT chrII:604129-604471 - 51 1.23e-05 GAATATGAAA AATGTACAGATGT GTAAATGTAC chrXVI:502864-503174 - 79 1.33e-05 ATTAGTCTG AATGTATGGAGGC TTCTGCAGGC chrIII:68378-68681 + 55 1.46e-05 CGTGAGTCAC TGTGCATGGGTTT AGCAATTAAT chrIX:99649-100011 + 30 1.46e-05 TTCATGAATA AATGTACTGGTGT TACATGGTGT chrIV:976478-976788 - 80 1.62e-05 GAAATTGT GGTGTATGGGTAC TATGCACAGC chrXIV:495209-495572 + 55 1.78e-05 GGGTGTGTAT AGTGTACGGATTG AATATGTCAA chrVIII:296879-297207 - 64 1.78e-05 AGCATGCAGT GATGTACTGGTGG ACGAAATTGT chrIV:599651-600219 - 67 1.92e-05 GAATCTGGCA GATGCATGGATCG TTGAATAGTA chrIII:137797-138207 + 56 2.08e-05 CAATCATTGT TGGGTAAGGATGT CACCTTCTTG chrVII:20404-20814 - 55 2.29e-05 TACAGGCAAG AGAGTACGGGTGT ATTGTTTTTT chrXVI:699958-700401 - 5 2.29e-05 GATTGGGTGT GATGTAAGGATTC GCGG chrIV:1162483-1162893 - 22 2.29e-05 AAATAATAAG AATGTATGTGTGT GCAATTTGTT chrXVI:520174-520540 - 57 2.50e-05 TTCCTCCGGC GAGGCCTGGGTGG AACACTCAGG chrIV:1278704-1278900 + 28 2.50e-05 CGCGGGATGC CATGCACGGATGC CTGCGGAGAC chrXIII:302733-303136 + 81 2.72e-05 CCAGGGGTGT GGGGTGTGGGCGC CCATATG chrX:651270-651370 - 67 2.94e-05 TTGAGACAAA TATGTATGGGTTA AGAATAATTA chrXIII:551369-551786 - 76 3.20e-05 TGGGTGCCAA TATGTACTGATGT TTAAGTAATA chrIX:177501-177911 + 54 3.48e-05 ACGGGTATTA GGGGTGAGGGTGA ATAAGGAAAG chrVII:592390-592800 - 67 3.48e-05 CGAACACGGA GAGGCACGGGCGA GAGAAAAAAA chrII:374878-375288 + 25 3.48e-05 TAAGAATATA AATGTCCGGATTT ATTTTATCAT chrII:605720-606132 + 81 3.77e-05 TTTTTTACTG GAGGCAAGGATGA GTTTGAA chrXI:518762-519273 + 62 3.77e-05 CCTAGTTCCT GGTGCCTGGATCT CGAGGCCGCG chrII:167907-168206 - 29 4.40e-05 TGGTGAAAAA TATGTCTGGGTTT TAAAACACTG chrIX:257362-257719 - 15 4.76e-05 CATACAATGT GTTGTTTGGGTGT TTTCCTTTCA chrIV:579054-579377 - 61 6.90e-05 TTTTTTTAAA AATGTTTGGGTCT ACTTTATGGT chrXIV:241396-241744 - 43 7.42e-05 GTGTATTGAT GGTGTTTAGGTGC TGGATGTTGG chrXIV:355480-355671 + 55 7.97e-05 CCCGTGCCAA GGTCTCTGGGTGT TGCTGATTTC chrV:354741-355234 + 88 7.97e-05 GACATCATAC AGTGTATGTATGG chrII:391452-391862 + 14 8.53e-05 CGTGCATATA TATGTGCGAGTGC ACGAAAGTGC chrXV:281980-282355 + 16 9.14e-05 CGCTTAAATA GAGGAGTGGATGC TCAGGATAAC chrXI:558633-559043 - 73 1.20e-04 TGAGATCAAT ATTGTCTGGGTGA TTGCTATCAC chrXI:356113-356348 + 28 1.38e-04 GACAGGCCAT TATGTAAGAGTGT GGAAACATAA chrV:140996-141400 - 66 2.03e-04 AAAAATAAGA AATGTACGGAGAC TGAGAGGAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:221973-222315 1.3e-08 40_[+3]_47 chrVIII:382920-383344 4.2e-08 18_[+3]_69 chrXII:932098-932493 6.2e-08 21_[+3]_66 chrVIII:125928-126296 9.6e-08 39_[-3]_48 chrXIII:145908-146263 1.6e-07 48_[-3]_39 chrII:89629-89964 1.6e-07 54_[+3]_33 chrX:157464-157564 1.6e-07 2_[+3]_85 chrXI:614218-614320 1.8e-07 83_[-3]_4 chrI:81950-82269 2e-07 50_[+3]_37 chrIII:58762-58929 2e-07 75_[-3]_12 chrVII:149129-149519 2.4e-07 43_[+3]_44 chrXII:922118-922549 3.1e-07 61_[-3]_26 chrVI:64982-65332 3.1e-07 59_[+3]_28 chrX:703260-703360 3.1e-07 57_[+3]_30 chrIV:1355741-1355977 3.1e-07 29_[+3]_58 chrIX:68211-68506 3.7e-07 41_[-3]_46 chrXVI:378673-378933 3.7e-07 86_[+3]_1 chrXVI:76353-76721 3.7e-07 55_[+3]_32 chrXI:108749-109074 3.7e-07 59_[-3]_28 chrV:396220-396556 3.7e-07 40_[-3]_47 chrIV:1359392-1359792 3.7e-07 53_[-3]_34 chrXIII:225359-225716 3.7e-07 57_[-3]_30 chrXIII:732044-732397 4.4e-07 35_[-3]_52 chrV:68964-69466 4.4e-07 14_[+3]_73 chrII:181362-181609 5e-07 59_[-3]_28 chrII:45006-45343 5.8e-07 45_[-3]_42 chrVI:95469-95881 5.8e-07 10_[+3]_77 chrXVI:794516-794786 5.8e-07 53_[-3]_34 chrXV:1028671-1029106 5.8e-07 68_[+3]_19 chrXII:241630-241997 7.3e-07 43_[-3]_44 chrXII:818835-819155 7.3e-07 53_[-3]_34 chrXV:678837-679171 7.3e-07 55_[+3]_32 chrXII:713138-713568 7.3e-07 68_[+3]_19 chrXV:92933-93310 7.3e-07 40_[+3]_47 chrVI:223921-224192 7.3e-07 50_[+3]_37 chrXII:262815-263080 7.3e-07 67_[-3]_20 chrXII:522159-522420 7.3e-07 63_[-3]_24 chrIV:1300948-1301323 9.5e-07 23_[-3]_64 chrXII:710632-710899 9.5e-07 17_[-3]_70 chrIII:163440-163893 1.4e-06 30_[+3]_57 chrVI:221750-222072 1.4e-06 58_[+3]_29 chrXV:901347-901757 1.4e-06 37_[+3]_50 chrXII:781465-781860 1.4e-06 43_[+3]_44 chrVII:534807-535220 1.4e-06 40_[+3]_47 chrXII:1028204-1028564 1.6e-06 63_[-3]_24 chrVIII:148947-149262 1.6e-06 27_[+3]_60 chrXV:167975-168464 1.7e-06 37_[-3]_50 chrIV:541754-542122 1.7e-06 55_[-3]_32 chrIV:341268-341606 1.7e-06 55_[+3]_32 chrIV:411256-411640 1.9e-06 36_[-3]_51 chrIX:382203-382399 1.9e-06 34_[+3]_53 chrIII:78257-78802 1.9e-06 62_[+3]_25 chrIX:254232-254544 1.9e-06 19_[+3]_68 chrXV:1004091-1004419 1.9e-06 41_[+3]_46 chrXVI:406212-406547 1.9e-06 41_[-3]_46 chrIV:538969-539216 1.9e-06 62_[-3]_25 chrVII:366051-366490 2.1e-06 16_[+3]_71 chrVIII:175062-175380 2.1e-06 10_[-3]_77 chrXVI:829079-829372 2.5e-06 45_[+3]_42 chrXVI:302688-302975 2.5e-06 47_[-3]_40 chrXII:48710-49078 2.5e-06 58_[+3]_29 chrXIII:754424-754768 2.5e-06 25_[+3]_62 chrV:140467-140908 2.5e-06 37_[+3]_50 chrXIV:444464-444772 2.5e-06 52_[+3]_35 chrXII:234639-234791 2.5e-06 37_[+3]_50 chrVII:438593-438902 2.7e-06 60_[+3]_27 chrV:423108-423466 2.7e-06 34_[-3]_53 chrXVI:281581-281883 2.7e-06 83_[-3]_4 chrXII:282507-282891 3e-06 7_[-3]_80 chrI:141619-142062 4.2e-06 56_[-3]_31 chrXVI:188599-188958 4.2e-06 61_[-3]_26 chrXII:673823-674233 4.2e-06 75_[-3]_12 chrXI:618805-619208 4.6e-06 54_[+3]_33 chrII:60830-61255 5e-06 80_[+3]_7 chrXII:498517-498874 5e-06 27_[-3]_60 chrIV:217172-217524 5e-06 15_[-3]_72 chrXII:903426-903640 5.6e-06 38_[-3]_49 chrXII:1012090-1012397 5.6e-06 44_[-3]_43 chrXV:882097-882507 5.6e-06 45_[-3]_42 chrIV:308025-308385 6.8e-06 68_[-3]_19 chrIV:1401266-1401585 6.8e-06 57_[-3]_30 chrIX:316132-316589 7.5e-06 41_[-3]_46 chrXIII:650763-651173 7.5e-06 62_[-3]_25 chrVII:856733-856982 7.5e-06 56_[+3]_31 chrXV:1025758-1025995 7.5e-06 49_[-3]_38 chrV:522694-523104 7.5e-06 52_[-3]_35 chrXV:505124-505494 8.2e-06 34_[-3]_53 chrXV:216250-216684 8.2e-06 41_[-3]_46 chrIV:117178-117582 8.2e-06 39_[-3]_48 chrII:165028-165517 9.1e-06 34_[-3]_53 chrXV:253819-254097 1e-05 69_[+3]_18 chrIV:1492557-1492967 1e-05 47_[+3]_40 chrXV:391593-391846 1.1e-05 46_[-3]_41 chrXIV:63127-63538 1.1e-05 35_[+3]_52 chrII:332317-332729 1.1e-05 51_[-3]_36 chrIV:1450891-1451240 1.1e-05 67_[+3]_20 chrXV:968035-968435 1.2e-05 83_[+3]_4 chrXV:866564-866930 1.2e-05 58_[+3]_29 chrII:604129-604471 1.2e-05 50_[-3]_37 chrXVI:502864-503174 1.3e-05 78_[-3]_9 chrIII:68378-68681 1.5e-05 54_[+3]_33 chrIX:99649-100011 1.5e-05 29_[+3]_58 chrIV:976478-976788 1.6e-05 79_[-3]_8 chrXIV:495209-495572 1.8e-05 54_[+3]_33 chrVIII:296879-297207 1.8e-05 63_[-3]_24 chrIV:599651-600219 1.9e-05 66_[-3]_21 chrIII:137797-138207 2.1e-05 55_[+3]_32 chrVII:20404-20814 2.3e-05 54_[-3]_33 chrXVI:699958-700401 2.3e-05 4_[-3]_83 chrIV:1162483-1162893 2.3e-05 21_[-3]_66 chrXVI:520174-520540 2.5e-05 56_[-3]_31 chrIV:1278704-1278900 2.5e-05 27_[+3]_60 chrXIII:302733-303136 2.7e-05 80_[+3]_7 chrX:651270-651370 2.9e-05 66_[-3]_21 chrXIII:551369-551786 3.2e-05 75_[-3]_12 chrIX:177501-177911 3.5e-05 53_[+3]_34 chrVII:592390-592800 3.5e-05 66_[-3]_21 chrII:374878-375288 3.5e-05 24_[+3]_63 chrII:605720-606132 3.8e-05 80_[+3]_7 chrXI:518762-519273 3.8e-05 61_[+3]_26 chrII:167907-168206 4.4e-05 28_[-3]_59 chrIX:257362-257719 4.8e-05 14_[-3]_73 chrIV:579054-579377 6.9e-05 60_[-3]_27 chrXIV:241396-241744 7.4e-05 42_[-3]_45 chrXIV:355480-355671 8e-05 54_[+3]_33 chrV:354741-355234 8e-05 87_[+3] chrII:391452-391862 8.5e-05 13_[+3]_74 chrXV:281980-282355 9.1e-05 15_[+3]_72 chrXI:558633-559043 0.00012 72_[-3]_15 chrXI:356113-356348 0.00014 27_[+3]_60 chrV:140996-141400 0.0002 65_[-3]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RRTGTAYGGRTGT width=13 seqs=131 chrIV:221973-222315 ( 41) GGTGTACGGGTGT 1 chrVIII:382920-383344 ( 19) GATGTATGGGTGT 1 chrXII:932098-932493 ( 22) GATGTACGGATGT 1 chrVIII:125928-126296 ( 40) GGTGTACGGATGC 1 chrXIII:145908-146263 ( 49) GGTGTATGGATGT 1 chrII:89629-89964 ( 55) GGTGTATGGATGT 1 chrX:157464-157564 ( 3) GATGTATGGATGT 1 chrXI:614218-614320 ( 84) GGTGTGCGGGTGT 1 chrI:81950-82269 ( 51) GGTGCACGGATGT 1 chrIII:58762-58929 ( 76) GGTGCACGGATGT 1 chrVII:149129-149519 ( 44) GGTGTATGGATGC 1 chrXII:922118-922549 ( 62) TATGTACGGGTGT 1 chrVI:64982-65332 ( 60) TATGTACGGGTGT 1 chrX:703260-703360 ( 58) GATGCATGGGTGC 1 chrIV:1355741-1355977 ( 30) AATGTATGGGTGT 1 chrIX:68211-68506 ( 42) AATGTACGGATGT 1 chrXVI:378673-378933 ( 87) AATGTACGGATGT 1 chrXVI:76353-76721 ( 56) GATGTACGGGTGA 1 chrXI:108749-109074 ( 60) AATGTACGGATGT 1 chrV:396220-396556 ( 41) AGTGTACGGATGT 1 chrIV:1359392-1359792 ( 54) AATGTACGGATGT 1 chrXIII:225359-225716 ( 58) AATGTACGGATGT 1 chrXIII:732044-732397 ( 36) GATGTGCGGATGT 1 chrV:68964-69466 ( 15) GGGGTACGGGTGC 1 chrII:181362-181609 ( 60) AATGTATGGGTGC 1 chrII:45006-45343 ( 46) AATGTACGGATGC 1 chrVI:95469-95881 ( 11) GGTGTGTGGGTGC 1 chrXVI:794516-794786 ( 54) TATGTATGGGTGT 1 chrXV:1028671-1029106 ( 69) AATGTACGGATGC 1 chrXII:241630-241997 ( 44) TATGTACGGATGT 1 chrXII:818835-819155 ( 54) TATGTACGGATGT 1 chrXV:678837-679171 ( 56) TATGTACGGATGT 1 chrXII:713138-713568 ( 69) TATGTACGGATGT 1 chrXV:92933-93310 ( 41) TGTGTACGGATGT 1 chrVI:223921-224192 ( 51) TATGTACGGATGT 1 chrXII:262815-263080 ( 68) AATGTATGGATGT 1 chrXII:522159-522420 ( 64) TGTGTACGGATGT 1 chrIV:1300948-1301323 ( 24) AGTGCACGGATGT 1 chrXII:710632-710899 ( 18) GATGCGTGGGTGT 1 chrIII:163440-163893 ( 31) GGTGCGTGGGTGC 1 chrVI:221750-222072 ( 59) AATGTACGGGTGA 1 chrXV:901347-901757 ( 38) AATGTACGGGTGA 1 chrXII:781465-781860 ( 44) AATGCACGGATGC 1 chrVII:534807-535220 ( 41) AATGCACGGATGC 1 chrXII:1028204-1028564 ( 64) GGTGCATGGGTGA 1 chrVIII:148947-149262 ( 28) GGTGCATGGGTGA 1 chrXV:167975-168464 ( 38) GATGTGTGGGTGG 1 chrIV:541754-542122 ( 56) GATGTAAGGATGT 1 chrIV:341268-341606 ( 56) AATGTACGGATGG 1 chrIV:411256-411640 ( 37) GGGGTGTGGGTGT 1 chrIX:382203-382399 ( 35) AATGTGTGGGTGC 1 chrIII:78257-78802 ( 63) GAGGCACGGATGC 1 chrIX:254232-254544 ( 20) AATGTGTGGGTGC 1 chrXV:1004091-1004419 ( 42) GGTGCAAGGGTGT 1 chrXVI:406212-406547 ( 42) AAGGTACGGATGT 1 chrIV:538969-539216 ( 63) GGGGTGTGGGTGT 1 chrVII:366051-366490 ( 17) TATGTGTGGGTGT 1 chrVIII:175062-175380 ( 11) GATGTATGGGTCT 1 chrXVI:829079-829372 ( 46) GATGTAAGGATGC 1 chrXVI:302688-302975 ( 48) GATGTCTGGATGT 1 chrXII:48710-49078 ( 59) GATGTACGGATCT 1 chrXIII:754424-754768 ( 26) GATGTATGGGGGT 1 chrV:140467-140908 ( 38) AAGGTATGGGTGC 1 chrXIV:444464-444772 ( 53) GAGGTACGGATGG 1 chrXII:234639-234791 ( 38) AAGGTATGGGTGC 1 chrVII:438593-438902 ( 61) AATGTATGGATGG 1 chrV:423108-423466 ( 35) GGTGTACGGAGGT 1 chrXVI:281581-281883 ( 84) AGTGTAAGGGTGT 1 chrXII:282507-282891 ( 8) GATGTACAGGTGT 1 chrI:141619-142062 ( 57) GGTGTGTGGATGA 1 chrXVI:188599-188958 ( 62) GATGCATGGGTTT 1 chrXII:673823-674233 ( 76) GGTGCATGGGTCT 1 chrXI:618805-619208 ( 55) GAGGCACGGATGG 1 chrII:60830-61255 ( 81) GGTGTACAGATGT 1 chrXII:498517-498874 ( 28) GATGCACGGAGGT 1 chrIV:217172-217524 ( 16) AATGTACGGGTTC 1 chrXII:903426-903640 ( 39) GGTGCATGGGTCC 1 chrXII:1012090-1012397 ( 45) GGTGCATGGGTTC 1 chrXV:882097-882507 ( 46) GGTGCACAGGTGT 1 chrIV:308025-308385 ( 69) TATGTAAGGATGT 1 chrIV:1401266-1401585 ( 58) TATGTGTGGGTGG 1 chrIX:316132-316589 ( 42) AATGTATGGGTTC 1 chrXIII:650763-651173 ( 63) AATGTACAGGTGT 1 chrVII:856733-856982 ( 57) GGTGTATGGGCGG 1 chrXV:1025758-1025995 ( 50) GATGAATGGGTGT 1 chrV:522694-523104 ( 53) GGTGTATGGGCGG 1 chrXV:505124-505494 ( 35) TGTGTATGGGTTT 1 chrXV:216250-216684 ( 42) AAGGCGCGGGTGC 1 chrIV:117178-117582 ( 40) TATGTATGGGTCT 1 chrII:165028-165517 ( 35) GGTGTATGGGTTA 1 chrXV:253819-254097 ( 70) GGTGTACGGATTA 1 chrIV:1492557-1492967 ( 48) TGTGCATGGATGA 1 chrXV:391593-391846 ( 47) GGTGTACGTATGT 1 chrXIV:63127-63538 ( 36) AATGTTCGGATGT 1 chrII:332317-332729 ( 52) ATTGTATGGGTGC 1 chrIV:1450891-1451240 ( 68) TATGTACAGGTGT 1 chrXV:968035-968435 ( 84) GGTGCGTGGGCGT 1 chrXV:866564-866930 ( 59) TTTGTATGGGTGT 1 chrII:604129-604471 ( 51) AATGTACAGATGT 1 chrXVI:502864-503174 ( 79) AATGTATGGAGGC 1 chrIII:68378-68681 ( 55) TGTGCATGGGTTT 1 chrIX:99649-100011 ( 30) AATGTACTGGTGT 1 chrIV:976478-976788 ( 80) GGTGTATGGGTAC 1 chrXIV:495209-495572 ( 55) AGTGTACGGATTG 1 chrVIII:296879-297207 ( 64) GATGTACTGGTGG 1 chrIV:599651-600219 ( 67) GATGCATGGATCG 1 chrIII:137797-138207 ( 56) TGGGTAAGGATGT 1 chrVII:20404-20814 ( 55) AGAGTACGGGTGT 1 chrXVI:699958-700401 ( 5) GATGTAAGGATTC 1 chrIV:1162483-1162893 ( 22) AATGTATGTGTGT 1 chrXVI:520174-520540 ( 57) GAGGCCTGGGTGG 1 chrIV:1278704-1278900 ( 28) CATGCACGGATGC 1 chrXIII:302733-303136 ( 81) GGGGTGTGGGCGC 1 chrX:651270-651370 ( 67) TATGTATGGGTTA 1 chrXIII:551369-551786 ( 76) TATGTACTGATGT 1 chrIX:177501-177911 ( 54) GGGGTGAGGGTGA 1 chrVII:592390-592800 ( 67) GAGGCACGGGCGA 1 chrII:374878-375288 ( 25) AATGTCCGGATTT 1 chrII:605720-606132 ( 81) GAGGCAAGGATGA 1 chrXI:518762-519273 ( 62) GGTGCCTGGATCT 1 chrII:167907-168206 ( 29) TATGTCTGGGTTT 1 chrIX:257362-257719 ( 15) GTTGTTTGGGTGT 1 chrIV:579054-579377 ( 61) AATGTTTGGGTCT 1 chrXIV:241396-241744 ( 43) GGTGTTTAGGTGC 1 chrXIV:355480-355671 ( 55) GGTCTCTGGGTGT 1 chrV:354741-355234 ( 88) AGTGTATGTATGG 1 chrII:391452-391862 ( 14) TATGTGCGAGTGC 1 chrXV:281980-282355 ( 16) GAGGAGTGGATGC 1 chrXI:558633-559043 ( 73) ATTGTCTGGGTGA 1 chrXI:356113-356348 ( 28) TATGTAAGAGTGT 1 chrV:140996-141400 ( 66) AATGTACGGAGAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 13 n= 51568 bayes= 8.64384 E= 1.2e-133 1 -464 136 -70 98 -1368 92 -334 -534 -1368 -55 148 -1368 -464 238 -1368 -434 22 -1368 130 132 -183 -39 -334 -202 127 -1368 59 -253 -1368 228 -376 -434 -1368 234 -376 59 -1368 149 -1368 -1368 -232 -232 158 -434 -164 212 -164 -154 36 -94 83 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 13 nsites= 131 E= 1.2e-133 0.312977 0.007634 0.488550 0.190840 0.610687 0.000000 0.358779 0.030534 0.007634 0.000000 0.129771 0.862595 0.000000 0.007634 0.992366 0.000000 0.015267 0.221374 0.000000 0.763359 0.770992 0.053435 0.145038 0.030534 0.076336 0.458015 0.000000 0.465649 0.053435 0.000000 0.923664 0.022901 0.015267 0.000000 0.961832 0.022901 0.465649 0.000000 0.534351 0.000000 0.000000 0.038168 0.038168 0.923664 0.015267 0.061069 0.824427 0.099237 0.106870 0.244275 0.099237 0.549618 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGT MEME-3 regular expression -------------------------------------------------------------------------------- [GA][AG]TG[TC]A[TC]GG[GA]TG[TC] -------------------------------------------------------------------------------- Time 931.22 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:673823-674233 8.24e-04 75_[-3(4.15e-06)]_12 chrXIII:372285-372628 1.85e-06 46_[-1(2.57e-10)]_24 chrIV:132680-133294 7.84e-01 100 chrVII:516252-516646 1.33e-01 100 chrII:181362-181609 3.86e-03 59_[-3(5.02e-07)]_28 chrIV:465068-465692 2.17e-01 100 chrIV:1256907-1257258 4.15e-04 21_[-2(1.84e-07)]_53 chrV:354741-355234 4.44e-11 30_[+1(5.51e-14)]_27_[+3(7.97e-05)] chrIV:1450036-1450170 9.91e-01 100 chrX:517693-517793 3.60e-02 100 chrXIV:631730-632094 1.06e-04 29_[-2(1.54e-07)]_45 chrXII:86946-87173 2.20e-01 100 chrV:138484-138928 1.80e-11 9_[+2(3.96e-07)]_8_[+1(6.60e-12)]_\ 27 chrIX:99649-100011 9.02e-03 29_[+3(1.46e-05)]_58 chrVII:400176-400586 9.76e-01 100 chrXII:731953-732282 6.56e-07 22_[+2(2.85e-09)]_52 chrIV:538969-539216 5.72e-04 62_[-3(1.89e-06)]_25 chrVIII:122179-122617 8.91e-01 100 chrVI:83094-83288 7.81e-01 100 chrXVI:40247-40706 8.76e-01 100 chrVIII:452618-452961 9.18e-01 100 chrXI:74442-74821 2.70e-05 42_[+2(1.73e-08)]_32 chrXV:796930-797429 7.13e-01 100 chrIX:248647-249403 3.11e-01 100 chrXV:677986-678396 3.73e-01 100 chrVIII:175062-175380 1.01e-03 10_[-3(2.13e-06)]_77 chrVI:31027-31503 9.35e-01 100 chrXIII:552900-553153 6.38e-01 100 chrXII:214769-215107 3.89e-15 2_[-1(6.60e-12)]_9_[-2(5.22e-11)]_\ 33 chrXVI:376912-377322 5.58e-01 100 chrXVI:173015-173236 8.16e-01 100 chrIV:1305454-1305815 9.16e-06 45_[+2(7.43e-10)]_29 chrXIV:443663-444073 2.73e-01 100 chrXI:518762-519273 1.09e-02 61_[+3(3.77e-05)]_26 chrIX:257362-257719 1.57e-02 14_[-3(4.76e-05)]_15_[-3(4.09e-05)]_\ 45 chrII:88956-89366 1.00e+00 100 chrIV:1401266-1401585 1.88e-02 57_[-3(6.82e-06)]_30 chrXV:882097-882507 1.83e-02 45_[-3(5.55e-06)]_42 chrIX:210480-210889 3.25e-16 30_[+2(4.28e-11)]_10_[+1(5.84e-13)]_\ 4 chrXVI:585881-586119 7.16e-01 100 chrXVI:67023-67324 1.84e-02 24_[-1(2.01e-05)]_46 chrVIII:388734-389024 1.01e-01 100 chrXVI:641197-641713 4.87e-01 100 chrX:197189-197289 3.87e-14 32_[-1(3.81e-10)]_9_[-2(1.50e-11)]_\ 3 chrXII:234639-234791 1.03e-02 37_[+3(2.47e-06)]_50 chrXIV:102534-103014 1.10e-06 27_[+1(5.46e-09)]_43 chrIV:1492557-1492967 2.98e-02 47_[+3(1.01e-05)]_40 chrII:414839-415249 9.94e-01 100 chrV:130967-131335 3.41e-04 26_[-2(4.64e-07)]_48 chrXII:793715-795085 8.12e-02 100 chrII:301230-301640 2.97e-01 100 chrXVI:435748-436144 2.14e-08 4_[-1(4.43e-08)]_8_[-2(2.20e-07)]_\ 32 chrIV:580393-580803 4.74e-01 100 chrXV:759065-759475 5.61e-01 100 chrXII:734642-734981 7.53e-07 40_[+2(4.28e-11)]_34 chrXIII:551369-551786 3.58e-03 [+3(5.02e-07)]_2_[+3(7.97e-05)]_47_\ [-3(3.20e-05)]_12 chrXV:671055-671337 1.61e-01 100 chrIV:1450891-1451240 2.03e-02 67_[+3(1.12e-05)]_20 chrXVI:643245-643655 7.77e-01 100 chrV:176925-177361 1.07e-10 39_[+1(5.51e-14)]_31 chrXIII:279905-280177 4.26e-01 100 chrXI:99692-100167 4.65e-01 100 chrX:123118-123218 5.06e-01 100 chrXII:950069-951312 3.07e-01 100 chrVIII:296879-297207 1.13e-02 41_[+3(7.42e-05)]_9_[-3(1.78e-05)]_\ 24 chrX:651270-651370 2.79e-02 66_[-3(2.94e-05)]_21 chrXIV:444464-444772 8.43e-03 36_[+3(6.16e-06)]_3_[+3(2.47e-06)]_\ 35 chrXI:248349-248481 9.49e-01 100 chrXII:795163-795462 7.82e-01 100 chrVII:481920-482578 4.81e-01 100 chrXIV:499375-499595 4.76e-01 100 chrIV:83388-83721 1.17e-05 43_[+2(5.62e-09)]_31 chrXVI:425219-425488 2.39e-01 100 chrXII:809262-809611 7.29e-01 100 chrVIII:455593-455887 1.40e-01 100 chrXIII:225359-225716 6.18e-04 44_[-3(9.52e-07)]_[-3(3.73e-07)]_30 chrXII:426947-427361 1.33e-08 27_[+2(1.20e-06)]_8_[+1(3.16e-09)]_\ 9 chrIV:1359392-1359792 2.53e-03 53_[-3(3.73e-07)]_2_[-3(2.29e-05)]_\ 19 chrXII:592407-592796 6.46e-06 42_[-2(2.85e-09)]_32 chrXVI:242807-243025 9.52e-01 100 chrXII:932098-932493 4.46e-04 21_[+3(6.24e-08)]_20_[+3(9.52e-07)]_\ 33 chrXV:778910-779320 4.62e-01 100 chrVII:366051-366490 1.70e-03 16_[+3(2.13e-06)]_71 chrXII:789759-790169 8.95e-01 100 chrVIII:475544-475949 8.25e-09 17_[-1(1.90e-10)]_9_[-2(7.80e-06)]_\ 18 chrXV:908675-908863 3.45e-01 100 chrII:332317-332729 3.77e-02 51_[-3(1.12e-05)]_36 chrIV:385973-386404 1.00e+00 100 chrXIII:752832-753242 1.01e-01 100 chrXV:980548-980922 1.51e-07 64_[+1(2.93e-11)]_6 chrVII:930862-931189 3.63e-05 22_[-2(5.62e-09)]_52 chrIV:1355741-1355977 1.97e-03 29_[+3(3.06e-07)]_11_[+3(7.26e-07)]_\ 34 chrXII:369289-370085 6.92e-01 100 chrIV:579054-579377 9.71e-02 60_[-3(6.90e-05)]_27 chrXI:283064-283474 9.97e-01 100 chrVII:794237-794598 4.14e-07 49_[+2(5.22e-11)]_25 chrX:608470-608570 7.26e-01 100 chrV:321862-322759 8.75e-01 100 chrXIII:301709-302119 3.09e-01 100 chrVII:122112-122517 4.08e-15 4_[+2(6.34e-10)]_9_[+1(1.67e-12)]_\ 31 chrIII:142611-142953 5.25e-05 13_[-2(5.62e-09)]_61 chrII:373145-373407 2.03e-01 100 chrXIII:411736-412146 2.65e-01 100 chrXII:88211-88409 9.09e-01 100 chrIX:187727-187971 6.55e-01 100 chrX:703260-703360 1.44e-03 57_[+3(3.06e-07)]_30 chrXII:947338-947748 8.21e-01 100 chrVII:648033-648443 5.54e-01 100 chrXI:309309-309719 7.52e-01 100 chrXIV:575274-575684 5.10e-01 100 chrIV:520805-521170 2.42e-12 34_[+2(2.01e-07)]_8_[+1(1.82e-11)]_\ 2 chrI:138971-139357 2.31e-06 37_[+2(3.76e-09)]_37 chrXV:300924-301332 6.84e-06 18_[+2(3.76e-09)]_56 chrV:140467-140908 7.29e-03 37_[+3(2.47e-06)]_24_[+3(1.12e-05)]_\ 13 chrVII:807276-807686 5.84e-01 100 chrXII:947111-947521 9.58e-01 100 chrXI:590037-590139 1.80e-01 100 chrV:140996-141400 2.18e-01 100 chrXII:721770-722180 6.84e-01 100 chrVII:287203-287635 6.77e-03 60_[-2(3.02e-06)]_14 chrXIV:229783-230193 9.97e-01 100 chrV:441818-442602 4.85e-01 100 chrXIII:572744-573144 2.15e-05 35_[-2(2.18e-08)]_39 chrIV:308025-308385 3.04e-03 48_[-3(2.08e-05)]_7_[-3(6.82e-06)]_\ 19 chrIV:434105-434461 2.17e-06 38_[-1(1.54e-10)]_32 chrXIV:783397-783807 2.84e-01 100 chrIX:316835-317245 8.22e-01 100 chrVI:224825-225328 2.62e-01 100 chrX:204552-204652 1.33e-08 19_[+2(1.20e-06)]_8_[+1(3.16e-09)]_\ 17 chrXIII:504886-505158 3.02e-01 100 chrVII:255195-255406 4.82e-01 100 chrIX:324137-324417 7.30e-01 100 chrX:526014-526114 5.69e-01 100 chrVIII:34933-35220 3.60e-01 100 chrX:121855-121955 6.79e-01 100 chrXVI:581887-582277 4.08e-15 29_[+2(6.34e-10)]_9_[+1(1.67e-12)]_\ 6 chrXI:162283-162728 5.72e-08 39_[-1(6.60e-12)]_31 chrIII:30564-30818 4.51e-01 100 chrXII:522159-522420 6.20e-03 38_[-3(1.23e-05)]_12_[-3(7.26e-07)]_\ 24 chrX:355196-355296 2.07e-03 47_[+2(1.20e-06)]_27 chrXII:262815-263080 5.20e-03 47_[-3(2.29e-05)]_7_[-3(7.26e-07)]_\ 20 chrIV:1489077-1489639 9.80e-01 100 chrXIII:388335-388633 2.90e-01 100 chrX:542829-542929 3.43e-03 42_[-2(2.26e-06)]_32 chrXV:619164-619598 7.56e-02 100 chrXII:300384-300667 5.41e-01 100 chrXII:65430-65715 1.27e-01 100 chrXIII:586528-586874 6.89e-05 32_[-2(1.36e-08)]_42 chrXIII:162059-162469 1.15e-01 36_[+1(9.41e-05)]_34 chrXV:1028671-1029106 1.97e-03 68_[+3(5.82e-07)]_19 chrVIII:555815-556225 4.96e-01 100 chrIV:357216-357626 1.57e-01 100 chrXI:84030-84383 3.10e-06 51_[+2(5.81e-08)]_23 chrVIII:148947-149262 5.56e-04 27_[+3(1.57e-06)]_60 chrXIII:302733-303136 8.90e-03 80_[+3(2.72e-05)]_7 chrIV:1461547-1461881 1.44e-01 100 chrXII:243303-243713 9.98e-01 100 chrX:617739-617839 1.79e-06 30_[+2(2.85e-09)]_44 chrIV:217172-217524 9.03e-04 15_[-3(5.01e-06)]_72 chrV:42215-42357 2.73e-01 100 chrXV:281980-282355 1.10e-06 15_[+3(9.14e-05)]_18_[+2(5.62e-09)]_\ 28 chrXII:784175-784575 1.63e-07 28_[+2(9.33e-11)]_46 chrVII:785487-785663 2.56e-01 100 chrXVI:406212-406547 1.14e-03 41_[-3(1.89e-06)]_46 chrI:70030-70185 3.33e-01 100 chrXIV:374712-375074 7.65e-06 25_[+2(6.41e-09)]_49 chrXV:1004091-1004419 7.23e-03 41_[+3(1.89e-06)]_46 chrV:139791-140012 2.66e-01 100 chrXIV:217295-217627 6.83e-01 100 chrV:522694-523104 1.70e-02 52_[-3(7.53e-06)]_35 chrXII:199209-199655 3.47e-01 100 chrVII:968759-969169 2.14e-02 56_[-3(5.56e-05)]_31 chrX:157464-157564 1.66e-04 2_[+3(1.56e-07)]_4_[+3(1.56e-07)]_\ 68 chrXII:806583-806775 5.21e-01 100 chrVI:223921-224192 7.17e-04 50_[+3(7.26e-07)]_37 chrVII:574780-575190 6.11e-01 100 chrVII:959325-959613 8.39e-01 100 chrII:226928-227289 1.70e-06 16_[+2(7.43e-10)]_58 chrIV:835782-836287 5.91e-01 100 chrIII:139210-139620 3.94e-01 100 chrVI:101196-101560 9.94e-06 47_[+2(3.76e-09)]_27 chrXII:975870-976215 2.70e-05 38_[-2(1.73e-08)]_36 chrVIII:62570-62942 1.11e-01 100 chrII:165932-166342 6.18e-01 100 chrXVI:453434-453766 4.24e-01 100 chrV:249802-249962 7.21e-01 100 chrXIII:661679-662053 1.05e-01 100 chrVII:771975-772182 5.29e-01 100 chrXV:836690-836903 9.71e-02 100 chrV:438529-438853 7.98e-05 58_[+2(1.36e-08)]_16 chrIV:541279-541853 8.81e-01 100 chrXII:628198-628654 4.33e-04 6_[+2(5.81e-08)]_68 chrXII:1029643-1030053 2.83e-01 100 chrXII:198623-198762 8.90e-01 100 chrIV:490985-491261 1.87e-01 100 chrXVI:775645-776010 6.53e-04 33_[-2(2.20e-07)]_41 chrX:541373-541473 1.33e-08 32_[+2(1.20e-06)]_8_[+1(3.16e-09)]_\ 4 chrVIII:75828-75937 6.60e-01 100 chrXII:603573-603983 5.79e-01 100 chrX:58919-59019 1.55e-12 18_[-1(1.54e-10)]_9_[-2(1.38e-09)]_\ 17 chrXII:637406-637602 1.72e-02 68_[+2(6.85e-05)]_6 chrVII:702882-703236 9.85e-01 100 chrVII:426976-427230 1.70e-01 100 chrVIII:125928-126296 8.75e-04 39_[-3(9.58e-08)]_1_[-3(6.39e-05)]_\ 34 chrXV:312571-312903 5.97e-01 100 chrXII:374169-374606 1.73e-10 17_[+2(1.53e-08)]_9_[+1(2.28e-09)]_\ 18 chrIII:11065-11475 2.19e-01 100 chrVII:798559-798969 3.47e-01 100 chrIII:58762-58929 7.61e-04 75_[-3(1.97e-07)]_12 chrXV:92933-93310 3.21e-05 14_[+3(1.12e-05)]_13_[+3(7.26e-07)]_\ 47 chrII:89629-89964 3.91e-04 34_[+3(5.01e-06)]_7_[+3(1.56e-07)]_\ 33 chrV:260309-260719 2.64e-01 100 chrI:182427-182627 3.04e-01 100 chrVIII:34558-34821 9.73e-01 100 chrX:648889-648989 1.51e-01 100 chrXV:288004-288441 6.99e-08 19_[+2(2.26e-06)]_25_[+1(1.13e-08)] chrXIV:663671-664081 4.27e-01 100 chrVI:64202-64388 4.91e-01 100 chrXII:713138-713568 6.05e-03 68_[+3(7.26e-07)]_19 chrXIV:241396-241744 3.97e-02 42_[-3(7.42e-05)]_45 chrIV:1236783-1237193 8.89e-01 100 chrXVI:810531-810842 2.70e-05 39_[+2(1.73e-08)]_35 chrXVI:719359-719524 2.79e-01 100 chrIV:359398-359811 7.00e-06 22_[+2(4.31e-09)]_52 chrIX:427238-427485 7.21e-01 100 chrIV:1150716-1151105 4.19e-07 55_[-2(9.33e-11)]_19 chrXIV:63127-63538 1.83e-03 35_[+3(1.12e-05)]_52 chrIX:370228-370652 1.07e-10 60_[+1(5.51e-14)]_10 chrV:301675-302085 5.33e-01 100 chrV:135272-135657 4.08e-15 18_[-1(1.67e-12)]_9_[-2(6.34e-10)]_\ 17 chrIV:1162483-1162893 2.67e-02 21_[-3(2.29e-05)]_66 chrXVI:281581-281883 1.57e-02 67_[-3(6.16e-06)]_3_[-3(2.74e-06)]_\ 4 chrXV:274483-274918 2.32e-07 22_[+2(9.33e-11)]_52 chrXV:678837-679171 3.06e-04 55_[+3(7.26e-07)]_32 chrIV:341268-341606 6.15e-04 55_[+3(1.75e-06)]_32 chrX:607263-607363 3.65e-01 100 chrVIII:451581-451792 2.60e-01 100 chrXV:1025758-1025995 7.81e-03 49_[-3(7.53e-06)]_38 chrXIV:665015-665284 8.29e-01 100 chrIII:16913-17237 1.79e-01 100 chrXII:498517-498874 2.58e-02 27_[-3(5.01e-06)]_60 chrV:52498-52650 9.99e-01 100 chrXIII:145908-146263 4.90e-04 48_[-3(1.56e-07)]_17_[-3(1.92e-05)]_\ 9 chrVI:137287-137725 2.50e-06 37_[-1(5.46e-09)]_33 chrIV:491587-491997 1.96e-01 100 chrVI:210503-210882 3.43e-03 39_[-2(2.26e-06)]_35 chrVII:319716-319981 1.69e-04 16_[+1(6.28e-08)]_54 chrIV:721795-722074 2.02e-01 100 chrVIII:48291-48495 6.49e-01 100 chrXV:382990-383196 9.84e-01 100 chrII:642905-643247 5.88e-04 26_[-2(2.20e-07)]_48 chrXIII:754424-754768 1.44e-02 25_[+3(2.47e-06)]_62 chrV:424948-425358 9.47e-01 100 chrV:396220-396556 7.78e-04 40_[-3(3.73e-07)]_5_[-3(8.53e-05)]_\ 29 chrIX:386566-387019 9.19e-01 100 chrXIII:379202-379587 2.64e-04 38_[-2(3.02e-06)]_36 chrVII:882879-883062 1.82e-01 100 chrXII:1028204-1028564 4.66e-03 63_[-3(1.57e-06)]_2_[+3(2.08e-05)]_\ 9 chrVI:64982-65332 1.21e-03 59_[+3(3.06e-07)]_28 chrVIII:237722-238121 5.34e-05 42_[-2(1.20e-08)]_32 chrXI:108749-109074 9.18e-04 41_[-3(6.90e-05)]_5_[-3(3.73e-07)]_\ 28 chrV:68964-69466 2.80e-04 14_[+3(4.38e-07)]_73 chrV:261041-261451 6.65e-02 100 chrXIII:510833-511243 6.25e-01 100 chrVII:399615-400025 5.76e-01 100 chrVII:1050214-1050555 3.46e-01 100 chrVIII:132906-133138 3.07e-01 100 chrVIII:105351-105538 8.98e-01 100 chrXIV:567965-568307 9.94e-06 28_[+2(3.76e-09)]_46 chrIV:230263-230673 8.94e-01 100 chrII:605720-606132 8.46e-05 39_[-3(3.00e-06)]_28_[+3(3.77e-05)]_\ 7 chrXV:989045-989456 2.42e-03 48_[-2(1.46e-06)]_26 chrXII:366071-366450 1.37e-01 100 chrXIV:355480-355671 8.01e-02 54_[+3(7.97e-05)]_33 chrII:604129-604471 2.28e-02 34_[-3(2.29e-05)]_3_[-3(1.23e-05)]_\ 37 chrXV:83104-83514 3.57e-01 100 chrV:61556-62125 1.08e-01 100 chrVI:180722-181220 2.80e-08 60_[-1(2.94e-12)]_10 chrIV:976478-976788 7.76e-03 79_[-3(1.62e-05)]_8 chrV:487232-487561 2.31e-01 100 chrIX:394749-395099 9.72e-01 100 chrIV:930671-930943 9.83e-01 100 chrVII:730960-731354 3.30e-10 29_[+2(1.73e-08)]_10_[+1(5.46e-09)]_\ 5 chrXV:911939-912730 4.12e-01 100 chrXII:962876-963238 7.25e-07 22_[-2(8.29e-09)]_52 chrXIII:352098-352451 7.27e-05 55_[+2(1.20e-08)]_19 chrII:60830-61255 1.35e-02 80_[+3(5.01e-06)]_7 chrX:415837-415937 5.96e-04 34_[-2(3.02e-06)]_40 chrXV:594255-594595 7.35e-05 24_[-2(1.73e-08)]_50 chrXI:308007-308375 2.50e-11 10_[-1(2.57e-10)]_10_[-2(1.36e-08)]_\ 24 chrVII:515-730 9.98e-01 100 chrIX:254232-254544 6.12e-03 19_[+3(1.89e-06)]_68 chrVII:364966-365376 9.70e-01 100 chrV:269138-269548 9.93e-01 100 chrXV:412169-412579 5.55e-01 100 chrXIV:104654-105072 3.48e-06 26_[+1(1.54e-10)]_44 chrIV:488473-489063 8.47e-01 100 chrV:117685-118278 6.26e-01 100 chrXIII:747789-748130 3.52e-04 28_[-2(3.96e-07)]_46 chrIV:802587-802984 2.42e-12 3_[-1(1.82e-11)]_8_[-2(2.01e-07)]_\ 33 chrXIV:417506-417770 5.24e-01 100 chrXV:253819-254097 1.17e-02 38_[-3(4.76e-05)]_18_[+3(1.01e-05)]_\ 18 chrXIII:759200-759339 9.74e-01 100 chrXII:796986-797365 3.03e-01 100 chrXV:226500-226860 4.76e-05 25_[-2(5.62e-09)]_49 chrVI:226505-226932 4.08e-15 27_[-1(1.67e-12)]_9_[-2(6.34e-10)]_\ 8 chrIV:1201576-1202002 4.08e-15 10_[+2(6.34e-10)]_9_[+1(1.67e-12)]_\ 25 chrVII:848665-848863 3.81e-01 100 chrVII:440518-440988 3.60e-06 20_[-1(4.61e-10)]_50 chrV:51826-52236 7.72e-01 100 chrXII:924472-924845 2.83e-01 100 chrXIV:442830-443291 2.90e-01 100 chrXII:818835-819155 3.44e-04 53_[-3(7.26e-07)]_34 chrIV:1080389-1080857 5.61e-01 100 chrXIII:296776-297468 8.60e-01 100 chrXIV:716088-716532 7.43e-01 100 chrIV:599651-600219 2.98e-02 66_[-3(1.92e-05)]_21 chrII:477065-477581 6.56e-01 100 chrX:73401-73501 7.41e-01 100 chrVIII:134170-134549 2.42e-12 11_[+2(2.01e-07)]_8_[+1(1.82e-11)]_\ 25 chrVII:878539-878993 6.16e-08 1_[-1(4.01e-09)]_42_[-2(3.02e-06)]_\ 1 chrVII:148494-148904 9.85e-01 100 chrXII:460402-460751 7.45e-01 100 chrXIV:507107-507517 4.05e-01 100 chrVII:534807-535220 2.06e-03 40_[+3(1.39e-06)]_47 chrXII:283541-283720 3.83e-01 100 chrVII:561471-561764 9.94e-01 100 chrII:167907-168206 2.43e-02 28_[-3(4.40e-05)]_4_[-3(5.97e-05)]_\ 42 chrXI:614972-615382 5.56e-01 100 chrIV:1352373-1352676 1.50e-06 38_[-2(6.34e-10)]_36 chrIII:292683-293093 9.46e-01 100 chrV:101124-101534 9.80e-01 100 chrIV:946124-946601 1.50e-05 50_[+1(1.13e-08)]_20 chrVII:845462-845882 2.03e-13 26_[+2(5.62e-09)]_7_[+1(2.94e-12)]_\ 11 chrXIII:91138-91298 3.68e-01 100 chrXII:232175-232584 9.58e-01 100 chrV:423108-423466 3.23e-03 34_[-3(2.74e-06)]_53 chrIII:177244-177347 2.19e-01 100 chrXII:781465-781860 4.92e-03 43_[+3(1.39e-06)]_44 chrII:255063-255473 9.11e-01 100 chrIV:541754-542122 1.21e-02 55_[-3(1.75e-06)]_32 chrXII:404167-404489 4.91e-01 100 chrXII:922118-922549 6.21e-04 35_[-3(1.01e-05)]_13_[-3(3.06e-07)]_\ 26 chrXVI:76353-76721 4.27e-04 55_[+3(3.73e-07)]_32 chrIII:149743-150126 1.71e-06 69_[+1(5.06e-09)]_1 chrXII:1012090-1012397 8.28e-04 44_[-3(5.55e-06)]_43 chrXII:241630-241997 1.71e-03 43_[-3(7.26e-07)]_8_[-3(1.01e-05)]_\ 23 chrVII:1004051-1004415 3.18e-09 32_[+2(1.28e-07)]_8_[+1(3.48e-08)]_\ 4 chrV:174660-175070 7.25e-01 100 chrXI:356113-356348 9.86e-02 100 chrVII:437189-437599 9.89e-01 100 chrVIII:382920-383344 8.87e-05 18_[+3(4.15e-08)]_4_[+3(4.57e-06)]_\ 52 chrII:374878-375288 4.16e-02 24_[+3(3.48e-05)]_63 chrIV:1302051-1302461 4.31e-01 100 chrIV:1278704-1278900 9.31e-03 27_[+3(2.50e-05)]_60 chrX:122050-122150 9.77e-01 100 chrVII:319313-319457 4.94e-01 100 chrII:391452-391862 1.49e-01 13_[+3(8.53e-05)]_74 chrV:492199-492597 1.73e-10 11_[-1(2.28e-09)]_9_[-2(1.53e-08)]_\ 24 chrV:225411-225742 7.35e-01 100 chrXII:368171-368602 4.27e-01 100 chrXIII:123256-123666 7.62e-01 100 chrX:422767-422867 1.05e-04 44_[+2(2.18e-08)]_30 chrVII:700473-701230 7.89e-01 100 chrVII:806161-806571 9.95e-01 100 chrIV:234218-234668 5.15e-01 100 chrV:99947-100370 1.71e-06 58_[+1(5.06e-09)]_12 chrXV:445847-446131 7.18e-01 100 chrV:469282-469620 3.15e-05 55_[+2(1.36e-08)]_19 chrXVI:794516-794786 3.73e-03 35_[-3(4.57e-06)]_5_[-3(5.82e-07)]_\ 34 chrXIII:653609-653726 7.72e-01 100 chrXVI:860194-860595 2.12e-13 34_[+2(5.62e-09)]_7_[+1(2.94e-12)]_\ 3 chrXVI:431949-432351 9.84e-01 100 chrIII:123435-123804 6.52e-13 15_[-1(1.24e-12)]_8_[-2(1.54e-07)]_\ 21 chrII:88135-88525 9.67e-01 100 chrXV:987598-988008 1.12e-01 100 chrVII:323792-324114 4.05e-01 100 chrVII:557630-558023 7.46e-02 100 chrXV:160368-160778 6.74e-01 100 chrXII:48710-49078 1.06e-02 58_[+3(2.47e-06)]_29 chrV:435646-435997 3.12e-06 27_[-2(6.34e-10)]_47 chrVIII:554213-554623 7.70e-01 100 chrIII:68378-68681 4.67e-02 54_[+3(1.46e-05)]_33 chrXIII:267985-268251 4.16e-01 100 chrX:531644-531744 9.54e-01 100 chrIX:127745-128086 3.26e-01 100 chrXVI:745472-745882 7.72e-01 100 chrVIII:146072-146462 3.87e-14 32_[-1(3.81e-10)]_9_[-2(1.50e-11)]_\ 3 chrXII:92365-92824 3.74e-13 3_[+2(3.76e-09)]_39_[+1(2.93e-11)]_\ 2 chrIII:127536-127896 8.21e-05 49_[+2(1.73e-08)]_25 chrVIII:358326-358746 8.35e-05 57_[-2(1.20e-08)]_17 chrXVI:502864-503174 3.27e-02 78_[-3(1.33e-05)]_9 chrVII:438593-438902 3.81e-03 37_[+3(9.13e-06)]_10_[+3(2.74e-06)]_\ 27 chrXI:46639-46980 7.45e-04 21_[-2(8.69e-08)]_53 chrXV:897523-897933 7.16e-01 100 chrX:115830-115930 3.03e-01 100 chrV:288187-288694 5.18e-01 100 chrXI:259521-259816 9.56e-01 100 chrIV:619811-620220 1.73e-10 11_[-1(2.28e-09)]_9_[-2(1.53e-08)]_\ 24 chrIII:78257-78802 1.59e-03 62_[+3(1.89e-06)]_25 chrIII:137797-138207 3.43e-02 55_[+3(2.08e-05)]_32 chrVII:914868-915196 2.72e-01 100 chrXVI:214855-215185 5.00e-01 100 chrX:233753-233853 1.04e-04 61_[+2(1.53e-08)]_13 chrVII:856733-856982 5.54e-04 56_[+3(7.53e-06)]_31 chrVII:405394-405713 5.67e-08 [+1(6.60e-12)]_70 chrXV:780366-780869 2.72e-01 100 chrIX:388635-388913 9.95e-01 100 chrVII:328416-328884 4.55e-10 16_[+1(5.51e-14)]_54 chrIII:168171-168561 8.16e-06 30_[-2(2.01e-07)]_44 chrV:443096-443429 7.78e-07 37_[-2(4.28e-11)]_37 chrVIII:148217-148627 9.79e-01 100 chrXVI:730915-731325 4.79e-01 100 chrXV:978133-978543 9.70e-01 100 chrVII:609634-610210 1.69e-02 100 chrXVI:188599-188958 5.06e-04 7_[+2(9.88e-05)]_28_[-3(4.15e-06)]_\ 26 chrIV:1095167-1095638 1.15e-05 25_[-1(2.92e-09)]_45 chrIV:980826-981203 1.70e-06 65_[-2(7.43e-10)]_9 chrXVI:812830-813134 3.36e-01 100 chrXVI:210030-210446 1.07e-10 11_[-1(5.51e-14)]_59 chrIX:382203-382399 6.46e-03 34_[+3(1.89e-06)]_53 chrXIV:65250-65500 1.47e-01 100 chrVI:162046-162383 2.67e-05 63_[+2(5.62e-09)]_11 chrVII:482672-482957 1.00e+00 100 chrIV:332851-333261 9.95e-01 100 chrXII:638539-638691 7.49e-01 100 chrXIV:89041-89720 6.86e-01 100 chrVIII:381640-381842 9.49e-01 100 chrXVI:769060-769493 1.85e-05 50_[-2(4.31e-09)]_24 chrXV:109545-110111 2.33e-01 100 chrXI:578784-579275 7.50e-07 43_[+1(8.83e-10)]_27 chrVII:919722-920132 8.20e-01 100 chrVII:23240-23650 2.23e-01 100 chrVIII:382269-382679 9.83e-01 100 chrXVI:645363-645748 4.33e-01 100 chrXV:113625-113982 2.35e-05 48_[+2(1.38e-09)]_26 chrXIII:297377-298862 5.32e-01 100 chrVII:479274-479489 7.64e-01 100 chrIV:1164964-1165171 3.71e-01 100 chrVI:95469-95881 1.58e-04 10_[+3(5.82e-07)]_77 chrVII:857231-857647 4.44e-01 100 chrXIV:64050-64460 6.92e-01 100 chrXV:976234-976635 2.39e-05 36_[+2(2.18e-08)]_38 chrI:180960-181435 2.36e-01 100 chrXVI:405115-405581 9.44e-01 100 chrXIII:652374-652940 7.60e-01 100 chrXII:84086-84402 4.17e-01 100 chrXII:856150-856560 4.80e-01 100 chrIV:591629-591957 3.66e-01 100 chrXV:977922-978332 9.03e-01 100 chrXII:499407-499592 8.84e-01 100 chrXV:841696-842106 8.00e-01 100 chrXIII:650763-651173 1.53e-02 62_[-3(7.53e-06)]_25 chrVIII:401059-401293 6.27e-01 100 chrXII:459548-460096 9.94e-01 100 chrXV:167975-168464 2.56e-03 18_[+3(3.28e-06)]_6_[-3(1.75e-06)]_\ 50 chrVII:774167-774604 4.30e-14 13_[+2(1.50e-11)]_9_[+1(3.81e-10)]_\ 22 chrXI:618805-619208 5.19e-03 26_[-3(2.72e-05)]_15_[+3(4.57e-06)]_\ 33 chrXI:490768-491158 1.82e-04 54_[+2(1.53e-08)]_20 chrVII:990103-990338 9.68e-01 100 chrXIII:808107-808524 3.99e-05 26_[-2(2.01e-07)]_48 chrIV:117178-117582 3.24e-02 39_[-3(8.23e-06)]_48 chrXII:125136-125405 6.98e-01 100 chrXV:866564-866930 3.72e-03 40_[-3(2.72e-05)]_5_[+3(1.23e-05)]_\ 29 chrXIII:420438-420830 1.35e-11 11_[-1(2.57e-10)]_10_[-2(1.36e-08)]_\ 23 chrXV:438465-438881 7.00e-06 19_[+2(4.31e-09)]_55 chrI:141619-142062 1.25e-02 56_[-3(4.15e-06)]_31 chrXII:710632-710899 4.74e-03 17_[-3(9.52e-07)]_70 chrIX:316132-316589 6.99e-03 41_[-3(7.53e-06)]_46 chrXVI:880130-880552 3.25e-16 12_[-1(5.84e-13)]_10_[-2(4.28e-11)]_\ 22 chrVI:31943-32277 4.61e-01 100 chrIV:551007-551417 8.13e-01 100 chrII:168552-168962 3.28e-01 100 chrXII:282507-282891 1.14e-02 7_[-3(3.00e-06)]_4_[-3(1.92e-05)]_\ 63 chrXI:364316-364647 8.26e-01 100 chrVII:786951-787361 9.55e-01 100 chrXI:140729-141273 1.18e-01 100 chrVII:592390-592800 1.87e-02 66_[-3(3.48e-05)]_21 chrXII:903426-903640 1.82e-02 38_[-3(5.55e-06)]_49 chrX:75973-76073 3.29e-01 100 chrXVI:243888-244298 2.55e-01 100 chrXV:901347-901757 2.74e-03 37_[+3(1.39e-06)]_50 chrXVI:770795-771089 6.85e-01 100 chrVII:661561-661927 1.98e-04 54_[+2(1.28e-07)]_20 chrI:81950-82269 1.02e-04 50_[+3(1.97e-07)]_37 chrIX:177501-177911 6.99e-02 53_[+3(3.48e-05)]_34 chrXIII:732044-732397 6.77e-04 35_[-3(4.38e-07)]_3_[+3(2.50e-05)]_\ 36 chrXV:571778-572140 3.53e-03 48_[+2(1.20e-06)]_26 chrXI:231156-231676 9.42e-02 100 chrIX:322375-322785 6.40e-01 100 chrXV:897752-898162 1.93e-01 100 chrVIII:294020-294430 6.03e-01 100 chrXI:614218-614320 2.79e-04 83_[-3(1.76e-07)]_4 chrXIV:87385-87759 8.24e-01 100 chrXVI:622327-622841 2.28e-11 13_[-1(4.61e-10)]_28_[-2(1.20e-08)]_\ 3 chrXI:513226-513583 3.09e-03 23_[-2(1.20e-06)]_51 chrXV:832497-832728 8.64e-01 100 chrXV:216250-216684 1.39e-02 33_[-3(8.23e-06)]_11_[-3(5.97e-05)]_\ 30 chrXV:110832-111160 1.92e-10 23_[-1(4.61e-10)]_8_[-2(8.69e-08)]_\ 13 chrVII:828476-828983 1.64e-07 51_[-1(6.60e-12)]_19 chrXVI:856732-857128 6.82e-14 21_[+2(1.50e-11)]_9_[+1(3.81e-10)]_\ 14 chrXII:940784-941194 9.41e-01 100 chrIV:130013-130337 7.89e-01 100 chrXII:1051988-1052267 2.33e-16 1_[-1(5.84e-13)]_10_[-2(4.28e-11)]_\ 33 chrIV:1017017-1017459 8.50e-11 26_[-1(5.51e-14)]_44 chrXII:645800-646212 2.21e-01 100 chrVIII:103899-104245 2.89e-01 100 chrVII:799-914 5.99e-01 100 chrXV:505124-505494 2.31e-02 34_[-3(8.23e-06)]_12_[-3(1.46e-05)]_\ 28 chrXIV:518996-519165 9.37e-02 100 chrV:176925-177363 1.07e-10 38_[+1(5.51e-14)]_32 chrIV:386453-386960 1.00e-01 100 chrII:165028-165517 1.11e-02 34_[-3(9.13e-06)]_53 chrXVI:282242-282652 8.98e-01 100 chrII:45006-45343 1.61e-03 45_[-3(5.82e-07)]_5_[+3(1.46e-05)]_\ 24 chrXII:875213-875594 7.00e-06 22_[+2(4.31e-09)]_52 chrIV:645033-645393 8.16e-06 35_[-2(2.01e-07)]_39 chrIV:230060-230470 5.45e-01 100 chrXV:1027946-1028240 9.97e-01 100 chrVII:738940-739333 7.78e-07 35_[+2(4.28e-11)]_39 chrVII:437895-438305 8.95e-01 100 chrXIII:119221-119526 6.36e-01 100 chrXIII:880526-880889 4.82e-01 100 chrVI:221750-222072 7.28e-03 58_[+3(1.39e-06)]_29 chrXVI:378673-378933 8.61e-05 61_[+3(7.53e-06)]_12_[+3(3.73e-07)]_\ 1 chrV:430992-431535 1.47e-02 29_[-1(5.61e-05)]_41 chrIX:183316-183700 7.78e-07 29_[-2(4.28e-11)]_45 chrXII:728277-728617 9.81e-02 100 chrXV:391593-391846 1.77e-02 46_[-3(1.12e-05)]_41 chrVII:823313-823698 2.50e-11 26_[+2(1.36e-08)]_10_[+1(2.57e-10)]_\ 8 chrII:326654-327054 4.59e-06 35_[-2(9.58e-08)]_39 chrXVI:520174-520540 5.30e-03 56_[-3(2.50e-05)]_31 chrV:102308-102718 7.48e-01 100 chrXVI:699958-700401 1.35e-02 4_[-3(2.29e-05)]_22_[-3(2.50e-05)]_\ 48 chrIX:68211-68506 5.91e-04 41_[-3(3.73e-07)]_46 chrXI:326940-327138 9.57e-01 100 chrIV:667789-668231 5.13e-09 54_[-1(5.84e-13)]_16 chrXII:1018993-1019351 1.29e-01 20_[+3(6.90e-05)]_67 chrXIII:306101-306911 9.69e-01 100 chrXIV:174195-174605 8.67e-01 100 chrXIV:392482-392684 9.22e-01 100 chrII:555863-556080 8.25e-01 100 chrXI:430699-431109 2.45e-01 100 chrXIII:550710-551120 8.45e-01 100 chrIV:221973-222315 4.88e-05 40_[+3(1.28e-08)]_47 chrV:434414-434775 4.76e-05 4_[-1(6.28e-08)]_66 chrXVI:302688-302975 1.08e-02 47_[-3(2.47e-06)]_40 chrIV:1300948-1301323 4.36e-03 23_[-3(9.52e-07)]_3_[+3(7.97e-05)]_\ 48 chrIII:163440-163893 1.28e-03 30_[+3(1.39e-06)]_17_[+3(3.20e-05)]_\ 27 chrVII:149129-149519 2.44e-03 43_[+3(2.38e-07)]_44 chrXI:558633-559043 6.03e-02 100 chrIII:139005-139415 6.01e-02 56_[+3(8.53e-05)]_31 chrIV:543658-544068 2.16e-01 100 chrXV:159670-159847 1.04e-02 33_[+1(6.27e-05)]_37 chrXV:968035-968435 9.78e-04 83_[+3(1.23e-05)]_4 chrXIII:302005-302415 2.83e-02 100 chrXIII:631930-632340 9.80e-01 100 chrV:250235-250514 2.74e-01 100 chrVII:807246-807355 9.70e-01 100 chrXIV:575474-575884 7.30e-01 100 chrVII:346182-346525 7.33e-01 100 chrVII:20404-20814 4.87e-02 54_[-3(2.29e-05)]_33 chrX:139822-139922 7.69e-01 100 chrIII:179018-179428 1.96e-01 100 chrXI:334194-334321 9.81e-01 100 chrII:405694-406172 1.47e-07 28_[+1(6.60e-12)]_42 chrIV:411256-411640 2.52e-04 36_[-3(1.89e-06)]_15_[-3(6.39e-05)]_\ 23 chrV:461771-462178 6.17e-01 100 chrVI:157806-158190 1.33e-04 33_[-2(1.20e-08)]_41 chrV:85819-86827 9.99e-01 100 chrXV:80662-81072 6.33e-01 100 chrVII:399414-399824 4.75e-01 100 chrXIII:290619-291053 1.07e-10 48_[+1(5.51e-14)]_22 chrXIV:495209-495572 4.31e-02 37_[+3(1.33e-05)]_4_[+3(1.78e-05)]_\ 33 chrXIV:138173-138430 5.98e-01 100 chrXVI:829079-829372 3.83e-04 45_[+3(2.47e-06)]_42 chrXV:779703-780413 8.63e-01 100 chrXV:424379-424647 6.14e-01 100 chrX:424334-424434 7.48e-06 19_[-2(8.29e-09)]_55 chrIV:323164-323574 5.29e-01 100 chrXVI:718477-718802 6.20e-01 100 chrX:374208-374308 1.33e-08 2_[-1(3.16e-09)]_8_[-2(1.20e-06)]_\ 34 chrIII:151038-151553 5.37e-09 46_[-1(1.67e-12)]_24 chrXV:742262-742672 7.57e-01 100 chrXVI:280799-281242 5.05e-01 100 chrII:613944-614354 7.79e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************