Invoking:
  getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.040265
Invoking:
  fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.05878
Invoking:
  fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.085211
Invoking:
  fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.015944
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background
Finished invoke:
  name: bg  status: 0  time: 0.021899
Invoking:
  meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 571.221962
Invoking:
  dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 58.756777
Invoking:
  centrimo -seqlen 340 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: centrimo  status: 0  time: 0.19724
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 0.352136
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary SCYYWAMCCACTRVGCCAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo1  status: 0  time: 0.430597
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary CGAACCSVKGAYCTYMYGRTT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo2  status: 0  time: 0.332874
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary WTWWWACAYCCRTACATYW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo3  status: 0  time: 0.364499
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo4  status: 0  time: 0.236912
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary AGTGRTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo5  status: 0  time: 0.236216
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary AARAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo6  status: 0  time: 0.257549
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary TAGTGTR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo7  status: 0  time: 0.247677
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary CAASGATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo8  status: 0  time: 0.210231
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary AGCGCV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo9  status: 0  time: 0.249967
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary GATTRGAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo10  status: 0  time: 0.200716
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary CACGGTGM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo11  status: 0  time: 0.210536
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary KTAGCTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo12  status: 0  time: 0.208331
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary CATYACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo13  status: 0  time: 0.219332
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary AGACCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo14  status: 0  time: 0.209475
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background -primary ACCATTRA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml
Finished invoke:
  name: spamo15  status: 0  time: 0.209663
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif SCYYWAMCCACTRVGCCAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo1  status: 0  time: 0.182159
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif CGAACCSVKGAYCTYMYGRTT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo2  status: 0  time: 0.183429
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif WTWWWACAYCCRTACATYW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo3  status: 0  time: 0.187167
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo4  status: 0  time: 0.089562
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif AGTGRTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo5  status: 0  time: 0.08344
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif AARAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo6  status: 0  time: 0.0823120000000001
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif TAGTGTR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo7  status: 0  time: 0.086087
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif CAASGATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo8  status: 0  time: 0.103078
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif AGCGCV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo9  status: 0  time: 0.117369
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif GATTRGAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo10  status: 0  time: 0.101612
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif CACGGTGM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo11  status: 0  time: 0.099995
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif KTAGCTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo12  status: 0  time: 0.095672
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif CATYACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo13  status: 0  time: 0.094166
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif AGACCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo14  status: 0  time: 0.08723
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/background --motif ACCATTRA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/AWRI1631--PDR8.fa
Finished invoke:
  name: fimo15  status: 0  time: 0.094414
Writing output
Invoking:
  meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR8/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.195684
Done