Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.011846 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055663 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.068265 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.012422 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background Finished invoke: name: bg status: 0 time: 0.009975 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 851.606442 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 76.910471 Invoking: centrimo -seqlen 376 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.207896 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.561889 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary GRATCGAACCSVKGAYCTYMHSRTTAMWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.432339 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary WACAYCCRTACATYH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.377792 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary AGTGGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.285393 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.275171 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary CTTGGCY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.266454 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary AGCGCGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.230894 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary TGGCGYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.267077 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary GTGGAGAY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.254002 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary ACACSCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.251346 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary AAAAAAMT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.273465 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.252185 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary CCAACWG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.244241 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary ACACTATA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.260193 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary GACTGTWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.214507 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.261882 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary ATCTKG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.274769 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary CCTTATKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.211554 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background -primary GACCATTR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.252283 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif GRATCGAACCSVKGAYCTYMHSRTTAMWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo1 status: 0 time: 0.20808 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif WACAYCCRTACATYH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo2 status: 0 time: 0.196749 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif AGTGGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo3 status: 0 time: 0.0983 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo4 status: 0 time: 0.098097 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif CTTGGCY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo5 status: 0 time: 0.09892 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif AGCGCGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo6 status: 0 time: 0.097828 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif TGGCGYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo7 status: 0 time: 0.099652 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif GTGGAGAY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo8 status: 0 time: 0.101036 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif ACACSCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo9 status: 0 time: 0.097912 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif AAAAAAMT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo10 status: 0 time: 0.102254 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo11 status: 0 time: 0.100868 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif CCAACWG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo12 status: 0 time: 0.098891 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif ACACTATA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo13 status: 0 time: 0.098917 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif GACTGTWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo14 status: 0 time: 0.100577 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo15 status: 0 time: 0.100732 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif ATCTKG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo16 status: 0 time: 0.08267 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif CCTTATKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo17 status: 0 time: 0.10011 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/background --motif GACCATTR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/AWRI1631--PDR1.fa Finished invoke: name: fimo18 status: 0 time: 0.099961 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--PDR1/summary.tsv Finished invoke: name: summary status: 0 time: 0.167746 Done