Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.018094 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055883 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.073222 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.013723 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.064367 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background Finished invoke: name: bg status: 0 time: 0.012042 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 853.164311 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 105.645069 Invoking: centrimo -seqlen 470 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.212882 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.549466 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary SGGRRTCGAACCSVKGAYCTYHHSRTTAM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.324647 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary BDTGGYSYAGTGGKTARVGCSHHM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.348318 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary TTYTTTTYYTTYTTTTYCTKM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.357535 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary ACCACYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.251937 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary CCTTAVC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.273575 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary GGTADC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.306482 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary ACCCABAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.19391 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary AMGWTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.412138 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary CGGCTATY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.193595 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary CACGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.2097 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary GATRAAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.19892 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary ATMTTTTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.202617 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary AAGAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.341719 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary CACTCGGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.22431 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary ACSTTCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.240096 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary GTMTTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.25263 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -primary ATGGGYGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.185158 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif SGGRRTCGAACCSVKGAYCTYHHSRTTAM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo1 status: 0 time: 0.261613 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif BDTGGYSYAGTGGKTARVGCSHHM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo2 status: 0 time: 0.246914 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif TTYTTTTYYTTYTTTTYCTKM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo3 status: 0 time: 0.257203 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif ACCACYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo4 status: 0 time: 0.152932 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif CCTTAVC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo5 status: 0 time: 0.153667 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif GGTADC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo6 status: 0 time: 0.137129 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif ACCCABAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo7 status: 0 time: 0.155483 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif AMGWTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo8 status: 0 time: 0.136795 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif CGGCTATY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo9 status: 0 time: 0.155546 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif CACGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo10 status: 0 time: 0.153863 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif GATRAAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo11 status: 0 time: 0.156807 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif ATMTTTTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo12 status: 0 time: 0.154663 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif AAGAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo13 status: 0 time: 0.1386 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif CACTCGGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo14 status: 0 time: 0.155029 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif ACSTTCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo15 status: 0 time: 0.154634 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif GTMTTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo16 status: 0 time: 0.151202 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background --motif ATGGGYGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/AWRI1631--MIG1.fa Finished invoke: name: fimo17 status: 0 time: 0.179534 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/summary.tsv Finished invoke: name: summary status: 0 time: 0.164021 Done