******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:617759-617859 1.0000 100 chrIX:174925-175190 1.0000 100 chrVIII:493151-493621 1.0000 100 chrXV:110856-111155 1.0000 100 chrV:269272-269742 1.0000 100 chrVIII:375363-375764 1.0000 100 chrVII:544502-544828 1.0000 100 chrXIII:220601-221071 1.0000 100 chrII:391405-391875 1.0000 100 chrXV:832434-832717 1.0000 100 chrX:197201-197301 1.0000 100 chrXVI:75290-75760 1.0000 100 chrI:166148-166511 1.0000 100 chrIX:210475-210876 1.0000 100 chrXVI:403457-403927 1.0000 100 chrIV:1305461-1305787 1.0000 100 chrXIII:226048-226518 1.0000 100 chrXII:656841-657140 1.0000 100 chrXIII:550121-550260 1.0000 100 chrXII:592427-592769 1.0000 100 chrIII:107198-107609 1.0000 100 chrIV:83409-83728 1.0000 100 chrXVI:860204-860642 1.0000 100 chrXV:254362-254832 1.0000 100 chrXIII:667666-668136 1.0000 100 chrXI:356146-356381 1.0000 100 chrXII:637019-638458 1.0000 100 chrV:141054-141341 1.0000 100 chrXV:1027940-1028354 1.0000 100 chrVII:961055-961525 1.0000 100 chrXV:977790-978260 1.0000 100 chrX:422786-422886 1.0000 100 chrVII:847106-847576 1.0000 100 chrIV:538881-539241 1.0000 100 chrXII:784195-784558 1.0000 100 chrIX:265054-265524 1.0000 100 chrXVI:689413-689796 1.0000 100 chrV:354757-355186 1.0000 100 chrII:605784-606088 1.0000 100 chrXII:95398-95868 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100 chrII:266258-266580 1.0000 100 chrXIII:550207-550677 1.0000 100 chrXIII:362911-363238 1.0000 100 chrXIII:480524-480836 1.0000 100 chrIV:359449-359802 1.0000 100 chrXI:552090-552560 1.0000 100 chrIV:1359462-1359748 1.0000 100 chrVI:210511-210845 1.0000 100 chrXV:438500-438879 1.0000 100 chrV:491105-491384 1.0000 100 chrIV:1352402-1352652 1.0000 100 chrXI:164951-165421 1.0000 100 chrIV:410218-410564 1.0000 100 chrV:250183-250653 1.0000 100 chrXV:1053966-1054436 1.0000 100 chrXIII:250520-250990 1.0000 100 chrVI:19621-19764 1.0000 100 chrVII:878586-878990 1.0000 100 chrIV:555765-556305 1.0000 100 chrXIV:632488-632737 1.0000 100 chrXI:338322-338792 1.0000 100 chrXII:932142-932430 1.0000 100 chrXIV:660300-660770 1.0000 100 chrI:139029-139334 1.0000 100 chrXII:424098-424415 1.0000 100 chrII:332393-332683 1.0000 100 chrIV:1075351-1075684 1.0000 100 chrXVI:282552-283022 1.0000 100 chrVIII:34454-35023 1.0000 100 chrII:256450-256920 1.0000 100 chrVI:137388-137677 1.0000 100 chrIV:117246-117520 1.0000 100 chrVII:987356-987652 1.0000 100 chrIV:992690-992989 1.0000 100 chrVII:1004099-1004368 1.0000 100 chrV:492249-492582 1.0000 100 chrXII:499128-499610 1.0000 100 chrXI:431973-432443 1.0000 100 chrX:189996-190096 1.0000 100 chrVII:930866-931160 1.0000 100 chrIII:295326-295742 1.0000 100 chrXII:731977-732267 1.0000 100 chrXII:1019092-1019262 1.0000 100 chrXII:605171-605550 1.0000 100 chrIV:769671-770141 1.0000 100 chrV:362765-363235 1.0000 100 chrV:305834-306145 1.0000 100 chrXVI:901587-901912 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 563 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 56300 N= 563 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.292 C 0.208 G 0.208 T 0.292 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MIG1/background): A 0.303 C 0.197 G 0.197 T 0.303 ******************************************************************************** ******************************************************************************** MOTIF BDTGGYSYAGTGGKTARVGCSHHM MEME-1 width = 24 sites = 131 llr = 1758 E-value = 1.0e-271 ******************************************************************************** -------------------------------------------------------------------------------- Motif BDTGGYSYAGTGGKTARVGCSHHM MEME-1 Description -------------------------------------------------------------------------------- Simplified A 13:3:::1a2::::27442:1323 pos.-specific C 3::::743::12:11:13163344 probability G 23:7a:32:8:6a4:133635112 matrix T 44a::324::92:56211111332 bits 2.3 * * 2.1 * * 1.9 * * 1.6 * * * * Relative 1.4 * * *** * Entropy 1.2 **** *** * (19.4 bits) 0.9 **** *** * 0.7 **** ***** * * 0.5 ***** ******** *** 0.2 ********************* * 0.0 ------------------------ Multilevel TTTGGCCTAGTGGTTAAAGCGTCC consensus CG A TGC A T GATGGAGCCTA sequence A T C AA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYSYAGTGGKTARVGCSHHM MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------ chrIV:410218-410564 + 43 2.01e-11 ATATTGGGCG TGTGGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrVII:774198-774515 + 48 2.01e-11 TAATTGGGCG TGTGGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrVIII:146160-146439 - 37 2.01e-11 TATCAGGGCG TGTGGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrXI:517808-518150 + 64 2.01e-11 ACTATGGGCG TGTGGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrXVI:856748-857083 + 42 2.01e-11 GATTCGGGCG TGTGGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrXII:656841-657140 - 38 2.01e-11 AAATTGGGCG TGTGGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrX:197201-197301 - 64 2.01e-11 TATTAGGGCG TGTGGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrV:288318-288663 - 56 1.89e-10 TGATAGGCAC TATGGCCGAGTGGTTAAGGCGACA GACTTGAAAT chrXVI:689413-689796 + 16 1.89e-10 TTTTGGGCAC TATGGCCGAGTGGTTAAGGCGACA GACTTGAAAT chrX:523898-523998 - 33 2.96e-10 TTAAAGGCAA CTTGGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrIV:437618-437942 + 47 2.96e-10 AGTAAGGCAA CTTGGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrI:182460-182650 - 70 2.96e-10 TTGGCAA CTTGGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrXII:167865-168184 - 23 2.96e-10 CATATGGCAA CTTGGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrXIII:259055-259386 - 41 2.96e-10 AGTATGGCAA CTTGGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrIV:980862-981172 - 60 2.96e-10 ATTGAGGCAA CTTGGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrIV:1305461-1305787 + 61 2.96e-10 ATTAAGGCAA CTTGGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrXII:214786-215079 - 45 1.03e-09 TTTTAGGGCA CATGGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrXVI:819339-819776 + 27 1.51e-09 AGAATGGTCT CTTGGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrIX:183348-183667 - 28 1.51e-09 TTCCTGGTCT CTTGGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXVI:880129-880542 - 56 1.51e-09 ATAATGGTCT CTTGGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrII:197337-197633 + 64 1.51e-09 ATCAAGGTCT CTTGGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXIV:569812-570098 - 7 1.51e-09 ACAGTGGTCT CTTGGCCCAGTTGGTTAAGGCACC GTGCTA chrVII:738957-739307 + 45 1.51e-09 AAATAGGTCT CTTGGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXII:734655-734968 + 46 1.51e-09 AGTTTGGTCT CTTGGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrIX:210475-210876 + 45 1.51e-09 TATCTGGTCT CTTGGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrII:266258-266580 + 14 1.83e-09 AAACTGCTTC TATGGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXIV:104694-105013 + 7 1.83e-09 AGCTTC TATGGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrIV:434194-434456 - 33 1.83e-09 CAGAAGCTTC TATGGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrVIII:116006-116334 - 31 1.83e-09 TTAGAGCTTC TATGGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXV:353961-354249 - 30 1.83e-09 TTACTGCTTC TATGGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXV:113670-113969 + 38 1.83e-09 ATTTAGCTTC TATGGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrX:59006-59106 - 37 1.83e-09 TAGAAGCTTC TATGGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrIX:174925-175190 + 29 1.83e-09 TACGAGCTTC TATGGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXV:274499-274881 + 38 2.20e-09 ATCGTGTCCC AGTGGCCGAGTGGTTAAGGCGATG CCCTGCTATT chrXII:784195-784558 + 33 2.20e-09 CAACCGTCCC AGTGGCCGAGTGGTTAAGGCGATG CCTGCTATTT chrXII:731977-732267 + 23 6.31e-09 ACAATGGGAG TTTGGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrXII:592427-592769 - 43 6.31e-09 ACAATGGGAG TTTGGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrX:617759-617859 + 49 6.31e-09 ACAATGGGAG TTTGGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrV:492249-492582 - 31 1.03e-08 TCCTATTCCT CGTGGCCCAATGGTCACGGCGTCT GGCTACGAAC chrXV:438500-438879 + 9 1.03e-08 TCATCCTT GTTAGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrIV:359449-359802 + 7 1.03e-08 ATCCTT GTTAGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrXVI:769084-769486 - 39 1.03e-08 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrXV:340209-340512 - 33 1.03e-08 ATCTGTTCCT CGTGGCCCAATGGTCACGGCGTCT GGCTACGAAC chrXII:374175-374554 + 46 1.03e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGCGTCT GGCTACGAAC chrXI:490809-491130 + 54 1.03e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGCGTCT GGCTACGAAC chrIV:619867-620174 - 43 1.03e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGCGTCT GGCTACGAAC chrIV:1352402-1352652 - 33 3.44e-08 AAATAGCCTT GTTGGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrXIII:480524-480836 - 35 3.44e-08 AAGTAGCCTT GTTGGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrIX:300160-300443 - 21 3.44e-08 AAATAGCCTT GTTGGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrXVI:581938-582226 + 35 3.44e-08 AAAGAGCCTT GTTGGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrVI:226593-226899 - 36 3.44e-08 AAAATGCCTT GTTGGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrVII:122140-122467 + 21 3.44e-08 AATTAGCCTT GTTGGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrV:135333-135644 - 31 3.44e-08 AAAAAGCCTT GTTGGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrVII:876241-876553 + 52 3.44e-08 GAATAGCCTT GTTGGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrII:9470-9743 + 32 6.84e-08 TTCGTGGAGG GTTGGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrIV:519631-519888 + 39 6.84e-08 TTTACGGAGG GTTGGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrXII:962895-963208 - 26 6.84e-08 TCGACGGAGG GTTGGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrV:469307-469585 + 66 7.80e-08 TAATTGGTTT CGTGGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXI:308041-308359 - 39 7.80e-08 TAAGTGGTTT CGTGGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXIII:372359-372620 - 51 7.80e-08 AACCTGGTTT CGTGGTCTAGTCGGTTATGGCATC TGCTTAACAC chrV:438573-438836 + 51 7.80e-08 AATTAGGTTT CGTGGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXV:663687-664020 - 54 7.80e-08 ATAGTGGTTT CGTGGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXIII:420461-420797 - 54 7.80e-08 TAACAGGTTT CGTGGTCTAGTCGGTTATGGCATC TGCTTAACAC chrII:36252-36584 + 35 1.65e-07 TGTAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrVIII:358394-358695 - 47 1.65e-07 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrVII:440553-440965 - 70 1.65e-07 ATGCGGA TTTAGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrVIII:237771-238091 - 30 1.65e-07 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrXII:628233-628590 + 27 1.65e-07 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrVI:137388-137677 - 49 2.09e-07 TGACTGACTC CATGGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXIV:632488-632737 + 42 2.09e-07 AAAGTGACTC CATGGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXIV:102591-102924 + 14 2.09e-07 TATAAGACTC CATGGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrIV:802621-802962 - 33 5.60e-07 TTGTCGGTCC TATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrIII:168228-168534 - 13 5.60e-07 GTCCTGGTCC TATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrXII:448490-448867 - 65 5.60e-07 GTTCCGGTCC TATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrIV:520834-521137 + 42 5.60e-07 TTTAGGGTCC TATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrXIII:808154-808462 - 31 5.60e-07 AAAAAGGTCC TATAGTGTAGTGGTTATCACTTTC GGTTCTGATC chrV:131021-131279 - 25 5.60e-07 TAAGAGGTTT TATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrVII:930866-931160 - 32 6.85e-07 AGTGAGCGCA AGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrIV:992690-992989 + 48 6.85e-07 TGTGAGCGCA AGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrXV:226519-226836 - 26 6.85e-07 ATTCAGCGCA AGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrIII:142608-142934 - 22 6.85e-07 TACTAGCGCA AGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrXV:282021-282328 + 45 6.85e-07 AAAGCGCGCA AGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrXI:84049-84365 + 56 6.85e-07 TGTATGGAGG GTTGGCCGAGTGGTCTAATGCGGC AGACTTAAGA chrXVI:860204-860642 + 11 6.85e-07 AACAAGCGCA AGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrXIV:96120-96452 - 48 8.35e-07 CACATGGGCG GTTAGTGTAGTGGTTATCATCCCA CCCTTCCAAG chrXV:110856-111155 - 50 8.35e-07 AACCCGGGCG GTTAGTGTAGTGGTTATCATCCCA CCCTTCCAAG chrI:139029-139334 + 26 9.20e-07 AGTACGGGCG TGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrXIV:567995-568268 + 39 9.20e-07 TAATCGGGCG TGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrXII:92366-92751 + 45 9.20e-07 AATAAGGGCG TGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrX:538459-538559 + 23 9.20e-07 AGTTGGTTCC GTTGGCGTAATGGTAACGCGTCTC CCTCCTAAGG chrVI:101247-101545 + 35 9.20e-07 AATTCGGGCG TGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrVI:210511-210845 - 51 1.22e-06 AACGACTCTC GGTAGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrX:390947-391047 - 9 1.22e-06 ATAGTGCTTC AGTAGCTCAGTAGGAAGAGCGTCA GTCTCATA chrIV:1175664-1176020 + 42 1.22e-06 ACAAAGCTTC AGTAGCTCAGTAGGAAGAGCGTCA GTCTCATAAT chrX:422786-422886 + 62 1.22e-06 TGTATGCTTC AGTAGCTCAGTAGGAAGAGCGTCA GTCTCATAAT chrII:405726-406125 + 8 2.66e-06 TAGCTCG CGTGGCGTAATGGCAACGCGTCTG ACTTCTAATC chrIV:568747-569114 + 7 2.66e-06 AGCTCG CGTGGCGTAATGGCAACGCGTCTG ACTTCTAATC chrXI:162397-162689 - 37 2.66e-06 TATTAGCTCG CGTGGCGTAATGGCAACGCGTCTG ACTTCTAATC chrVII:736159-736569 + 31 2.66e-06 CAATAGCTCG CGTGGCGTAATGGCAACGCGTCTG ACTTCTAATC chrXI:46656-46951 - 25 3.12e-06 ACTCAGCCCT TTTGGCCAAGTGGTAAGGCATCGC ACTCGTAATG chrIV:1256914-1257238 - 25 3.38e-06 TCTTAGCGAA AGTGGTTCAGTGGTTAGAATTCAT GCTTCCCAAG chrVII:1004099-1004368 + 38 3.65e-06 GGTTTGCCTC CTTAGCTTAGTGGTAGAGCGTTGC ACTTGTAATG chrVII:661576-661917 + 58 3.65e-06 AATTTGCCTC CTTAGCTTAGTGGTAGAGCGTTGC ACTTGTAATG chrVIII:466837-467110 + 72 3.65e-06 TTTTAGCCTC CTTAGCTTAGTGGTAGAGCGTTGC ACTTG chrIV:1324612-1325082 - 22 4.25e-06 GGCAGGCCAA GTTGGCGGAGCTGGTTCCATCCCA GGGCAGTATG chrXV:594252-594579 - 32 4.25e-06 GAAACGCGCA AGTGGTTCAGTGGTTAGAATTTAT GCTTCCCAAG chrXVI:435802-436114 - 28 7.52e-06 CAAAAGCTCG TATGGCGCAGTGGTAGCGCAGCAG ATTGCAAATC chrV:99986-100318 + 36 7.52e-06 GGCTAAGCGC CGTGGCGCAGTGGAAGCGCGCAGG GCTCATAACC chrX:517752-517852 - 22 7.52e-06 AGTTAAGCGC CGTGGCGCAGTGGAAGCGCGCAGG GCTCATAACC chrII:642920-643210 - 35 7.52e-06 AGAAAGCTCG TATGGCGCAGTGGTAGCGCAGCAG ATTGCAAATC chrIII:149786-150081 + 42 7.52e-06 TGTTGAGCGC CGTGGCGCAGTGGAAGCGCGCAGG GCTCATAACC chrIV:1075351-1075684 - 49 9.18e-06 ATATTGTTCC AATAGTGTAGCGGCTATCACGTTG CCTTCACACG chrX:204577-204677 + 34 9.79e-06 AAAAATCCGT GATAGTTTAATGGTCAGAATGGGC GCTTGTCGCG chrX:541407-541507 + 24 9.79e-06 GAAAATCCGT GATAGTTTAATGGTCAGAATGGGC GCTTGTCGCG chrXII:426994-427299 + 41 9.79e-06 TCTTATCCGT GATAGTTTAATGGTCAGAATGGGC GCTTGTCGCG chrXIII:463414-463769 + 18 9.79e-06 ATTTGTCCGT GATAGTTTAATGGTCAGAATGGGC GCTTGTCGCG chrX:355216-355316 + 45 9.79e-06 TTTCTTCCGT GATAGTTTAATGGTCAGAATGGGC GCTTGTCGCG chrVII:544502-544828 - 5 9.79e-06 TTTCTTCCGT GATAGTTTAATGGTCAGAATGGGC GCTT chrXIII:362911-363238 + 45 1.18e-05 AGTTTGCCAT CTTAGTATAGTGGTTAGTACACAT CGTTGTGGCC chrXI:313303-313618 - 34 1.18e-05 TGTTTGCCAT CTTAGTATAGTGGTTAGTACACAT CGTTGTGGCC chrVII:110499-110812 - 63 1.18e-05 TACCTGCCAT CTTAGTATAGTGGTTAGTACACAT CGTTGTGGCC chrV:434467-434768 - 17 1.18e-05 AAGTCGCCAT CTTAGTATAGTGGTTAGTACACAT CGTTGTGGCC chrIV:1017091-1017423 - 43 1.69e-05 TACAATCCGA TGTAGTGTAACGGCTATCACATCA CGTTCTCACC chrXIV:631724-632060 - 47 2.11e-05 CTACCGGGCG TGTGGTCTAGAGGTATGATTCTCG CTTAGGGTGC chrV:487241-487544 - 32 2.34e-05 TTTAATCCGA TATAGTGTAACGGCTATCACATCA CGCTTTCACC chrV:176952-177328 + 14 2.34e-05 TTTGATCCGA TATAGTGTAACGGCTATCACATCA CGCTTTCACC chrV:354757-355172 + 25 2.34e-05 TGTAATCCGA TATAGTGTAACGGCTATCACATCA CGCTTTCACC chrXIII:290638-290990 + 42 2.34e-05 TATAATCCGA TATAGTGTAACGGCTATCACATCA CGCTTTCACC chrIII:82361-82660 - 45 2.34e-05 TGTTATCCGA TATAGTGTAACGGCTATCACATCA CGCTTTCACC chrV:354757-355186 + 18 2.34e-05 TGTAATCCGA TATAGTGTAACGGCTATCACATCA CGCTTTCACC chrXII:283096-283805 - 37 5.74e-05 AGTATTCTGG TCTGTCCAAGTTGGTGAAACCCCA CTTCTTAGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYSYAGTGGKTARVGCSHHM MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:410218-410564 2e-11 42_[+1]_34 chrVII:774198-774515 2e-11 47_[+1]_29 chrVIII:146160-146439 2e-11 36_[-1]_40 chrXI:517808-518150 2e-11 63_[+1]_13 chrXVI:856748-857083 2e-11 41_[+1]_35 chrXII:656841-657140 2e-11 37_[-1]_39 chrX:197201-197301 2e-11 63_[-1]_13 chrV:288318-288663 1.9e-10 55_[-1]_21 chrXVI:689413-689796 1.9e-10 15_[+1]_61 chrX:523898-523998 3e-10 32_[-1]_44 chrIV:437618-437942 3e-10 46_[+1]_30 chrI:182460-182650 3e-10 69_[-1]_7 chrXII:167865-168184 3e-10 22_[-1]_54 chrXIII:259055-259386 3e-10 40_[-1]_36 chrIV:980862-981172 3e-10 59_[-1]_17 chrIV:1305461-1305787 3e-10 60_[+1]_16 chrXII:214786-215079 1e-09 44_[-1]_32 chrXVI:819339-819776 1.5e-09 26_[+1]_50 chrIX:183348-183667 1.5e-09 27_[-1]_49 chrXVI:880129-880542 1.5e-09 55_[-1]_21 chrII:197337-197633 1.5e-09 63_[+1]_13 chrXIV:569812-570098 1.5e-09 6_[-1]_70 chrVII:738957-739307 1.5e-09 44_[+1]_32 chrXII:734655-734968 1.5e-09 45_[+1]_31 chrIX:210475-210876 1.5e-09 44_[+1]_32 chrII:266258-266580 1.8e-09 13_[+1]_63 chrXIV:104694-105013 1.8e-09 6_[+1]_70 chrIV:434194-434456 1.8e-09 32_[-1]_44 chrVIII:116006-116334 1.8e-09 30_[-1]_46 chrXV:353961-354249 1.8e-09 29_[-1]_47 chrXV:113670-113969 1.8e-09 37_[+1]_39 chrX:59006-59106 1.8e-09 36_[-1]_40 chrIX:174925-175190 1.8e-09 28_[+1]_48 chrXV:274499-274881 2.2e-09 37_[+1]_39 chrXII:784195-784558 2.2e-09 32_[+1]_44 chrXII:731977-732267 6.3e-09 22_[+1]_54 chrXII:592427-592769 6.3e-09 42_[-1]_34 chrX:617759-617859 6.3e-09 48_[+1]_28 chrV:492249-492582 1e-08 30_[-1]_46 chrXV:438500-438879 1e-08 8_[+1]_68 chrIV:359449-359802 1e-08 6_[+1]_70 chrXVI:769084-769486 1e-08 38_[-1]_38 chrXV:340209-340512 1e-08 32_[-1]_44 chrXII:374175-374554 1e-08 45_[+1]_31 chrXI:490809-491130 1e-08 53_[+1]_23 chrIV:619867-620174 1e-08 42_[-1]_34 chrIV:1352402-1352652 3.4e-08 32_[-1]_44 chrXIII:480524-480836 3.4e-08 34_[-1]_42 chrIX:300160-300443 3.4e-08 20_[-1]_56 chrXVI:581938-582226 3.4e-08 34_[+1]_42 chrVI:226593-226899 3.4e-08 35_[-1]_41 chrVII:122140-122467 3.4e-08 20_[+1]_56 chrV:135333-135644 3.4e-08 30_[-1]_46 chrVII:876241-876553 3.4e-08 51_[+1]_25 chrII:9470-9743 6.8e-08 31_[+1]_45 chrIV:519631-519888 6.8e-08 38_[+1]_38 chrXII:962895-963208 6.8e-08 25_[-1]_51 chrV:469307-469585 7.8e-08 65_[+1]_11 chrXI:308041-308359 7.8e-08 38_[-1]_38 chrXIII:372359-372620 7.8e-08 50_[-1]_26 chrV:438573-438836 7.8e-08 50_[+1]_26 chrXV:663687-664020 7.8e-08 53_[-1]_23 chrXIII:420461-420797 7.8e-08 53_[-1]_23 chrII:36252-36584 1.7e-07 34_[+1]_42 chrVIII:358394-358695 1.7e-07 46_[-1]_30 chrVII:440553-440965 1.7e-07 69_[-1]_7 chrVIII:237771-238091 1.7e-07 29_[-1]_47 chrXII:628233-628590 1.7e-07 26_[+1]_50 chrVI:137388-137677 2.1e-07 48_[-1]_28 chrXIV:632488-632737 2.1e-07 41_[+1]_35 chrXIV:102591-102924 2.1e-07 13_[+1]_63 chrIV:802621-802962 5.6e-07 32_[-1]_44 chrIII:168228-168534 5.6e-07 12_[-1]_64 chrXII:448490-448867 5.6e-07 64_[-1]_12 chrIV:520834-521137 5.6e-07 41_[+1]_35 chrXIII:808154-808462 5.6e-07 30_[-1]_46 chrV:131021-131279 5.6e-07 24_[-1]_52 chrVII:930866-931160 6.9e-07 31_[-1]_45 chrIV:992690-992989 6.9e-07 47_[+1]_29 chrXV:226519-226836 6.9e-07 25_[-1]_51 chrIII:142608-142934 6.9e-07 21_[-1]_55 chrXV:282021-282328 6.9e-07 44_[+1]_32 chrXI:84049-84365 6.9e-07 55_[+1]_21 chrXVI:860204-860642 6.9e-07 10_[+1]_66 chrXIV:96120-96452 8.3e-07 47_[-1]_29 chrXV:110856-111155 8.3e-07 49_[-1]_27 chrI:139029-139334 9.2e-07 25_[+1]_51 chrXIV:567995-568268 9.2e-07 38_[+1]_38 chrXII:92366-92751 9.2e-07 44_[+1]_32 chrX:538459-538559 9.2e-07 22_[+1]_54 chrVI:101247-101545 9.2e-07 34_[+1]_42 chrVI:210511-210845 1.2e-06 50_[-1]_26 chrX:390947-391047 1.2e-06 8_[-1]_68 chrIV:1175664-1176020 1.2e-06 41_[+1]_35 chrX:422786-422886 1.2e-06 61_[+1]_15 chrII:405726-406125 2.7e-06 7_[+1]_69 chrIV:568747-569114 2.7e-06 6_[+1]_70 chrXI:162397-162689 2.7e-06 36_[-1]_40 chrVII:736159-736569 2.7e-06 30_[+1]_46 chrXI:46656-46951 3.1e-06 24_[-1]_52 chrIV:1256914-1257238 3.4e-06 24_[-1]_52 chrVII:1004099-1004368 3.7e-06 37_[+1]_39 chrVII:661576-661917 3.7e-06 57_[+1]_19 chrVIII:466837-467110 3.7e-06 71_[+1]_5 chrIV:1324612-1325082 4.3e-06 21_[-1]_55 chrXV:594252-594579 4.3e-06 31_[-1]_45 chrXVI:435802-436114 7.5e-06 27_[-1]_49 chrV:99986-100318 7.5e-06 35_[+1]_41 chrX:517752-517852 7.5e-06 21_[-1]_55 chrII:642920-643210 7.5e-06 34_[-1]_42 chrIII:149786-150081 7.5e-06 41_[+1]_35 chrIV:1075351-1075684 9.2e-06 48_[-1]_28 chrX:204577-204677 9.8e-06 33_[+1]_43 chrX:541407-541507 9.8e-06 23_[+1]_53 chrXII:426994-427299 9.8e-06 40_[+1]_36 chrXIII:463414-463769 9.8e-06 17_[+1]_59 chrX:355216-355316 9.8e-06 44_[+1]_32 chrVII:544502-544828 9.8e-06 4_[-1]_72 chrXIII:362911-363238 1.2e-05 44_[+1]_32 chrXI:313303-313618 1.2e-05 33_[-1]_43 chrVII:110499-110812 1.2e-05 62_[-1]_14 chrV:434467-434768 1.2e-05 16_[-1]_60 chrIV:1017091-1017423 1.7e-05 42_[-1]_34 chrXIV:631724-632060 2.1e-05 46_[-1]_30 chrV:487241-487544 2.3e-05 31_[-1]_45 chrV:176952-177328 2.3e-05 13_[+1]_63 chrV:354757-355172 2.3e-05 24_[+1]_52 chrXIII:290638-290990 2.3e-05 41_[+1]_35 chrIII:82361-82660 2.3e-05 44_[-1]_32 chrV:354757-355186 2.3e-05 17_[+1]_59 chrXII:283096-283805 5.7e-05 36_[-1]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYSYAGTGGKTARVGCSHHM MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BDTGGYSYAGTGGKTARVGCSHHM width=24 seqs=131 chrIV:410218-410564 ( 43) TGTGGCGTAGTCGGTAGCGCGCTC 1 chrVII:774198-774515 ( 48) TGTGGCGTAGTCGGTAGCGCGCTC 1 chrVIII:146160-146439 ( 37) TGTGGCGTAGTCGGTAGCGCGCTC 1 chrXI:517808-518150 ( 64) TGTGGCGTAGTCGGTAGCGCGCTC 1 chrXVI:856748-857083 ( 42) TGTGGCGTAGTCGGTAGCGCGCTC 1 chrXII:656841-657140 ( 38) TGTGGCGTAGTCGGTAGCGCGCTC 1 chrX:197201-197301 ( 64) TGTGGCGTAGTCGGTAGCGCGCTC 1 chrV:288318-288663 ( 56) TATGGCCGAGTGGTTAAGGCGACA 1 chrXVI:689413-689796 ( 16) TATGGCCGAGTGGTTAAGGCGACA 1 chrX:523898-523998 ( 33) CTTGGCCGAGTGGTTAAGGCGAAA 1 chrIV:437618-437942 ( 47) CTTGGCCGAGTGGTTAAGGCGAAA 1 chrI:182460-182650 ( 70) CTTGGCCGAGTGGTTAAGGCGAAA 1 chrXII:167865-168184 ( 23) CTTGGCCGAGTGGTTAAGGCGAAA 1 chrXIII:259055-259386 ( 41) CTTGGCCGAGTGGTTAAGGCGAAA 1 chrIV:980862-981172 ( 60) CTTGGCCGAGTGGTTAAGGCGAAA 1 chrIV:1305461-1305787 ( 61) CTTGGCCGAGTGGTTAAGGCGAAA 1 chrXII:214786-215079 ( 45) CATGGCGCAGTTGGTAGCGCGCTT 1 chrXVI:819339-819776 ( 27) CTTGGCCCAGTTGGTTAAGGCACC 1 chrIX:183348-183667 ( 28) CTTGGCCCAGTTGGTTAAGGCACC 1 chrXVI:880129-880542 ( 56) CTTGGCCCAGTTGGTTAAGGCACC 1 chrII:197337-197633 ( 64) CTTGGCCCAGTTGGTTAAGGCACC 1 chrXIV:569812-570098 ( 7) CTTGGCCCAGTTGGTTAAGGCACC 1 chrVII:738957-739307 ( 45) CTTGGCCCAGTTGGTTAAGGCACC 1 chrXII:734655-734968 ( 46) CTTGGCCCAGTTGGTTAAGGCACC 1 chrIX:210475-210876 ( 45) CTTGGCCCAGTTGGTTAAGGCACC 1 chrII:266258-266580 ( 14) TATGGCCAAGTTGGTAAGGCGCCA 1 chrXIV:104694-105013 ( 7) TATGGCCAAGTTGGTAAGGCGCCA 1 chrIV:434194-434456 ( 33) TATGGCCAAGTTGGTAAGGCGCCA 1 chrVIII:116006-116334 ( 31) TATGGCCAAGTTGGTAAGGCGCCA 1 chrXV:353961-354249 ( 30) TATGGCCAAGTTGGTAAGGCGCCA 1 chrXV:113670-113969 ( 38) TATGGCCAAGTTGGTAAGGCGCCA 1 chrX:59006-59106 ( 37) TATGGCCAAGTTGGTAAGGCGCCA 1 chrIX:174925-175190 ( 29) TATGGCCAAGTTGGTAAGGCGCCA 1 chrXV:274499-274881 ( 38) AGTGGCCGAGTGGTTAAGGCGATG 1 chrXII:784195-784558 ( 33) AGTGGCCGAGTGGTTAAGGCGATG 1 chrXII:731977-732267 ( 23) TTTGGCCGAGTGGTTTAAGGCGTC 1 chrXII:592427-592769 ( 43) TTTGGCCGAGTGGTTTAAGGCGTC 1 chrX:617759-617859 ( 49) TTTGGCCGAGTGGTTTAAGGCGTC 1 chrV:492249-492582 ( 31) CGTGGCCCAATGGTCACGGCGTCT 1 chrXV:438500-438879 ( 9) GTTAGCTCAGTTGGTAGAGCGTTC 1 chrIV:359449-359802 ( 7) GTTAGCTCAGTTGGTAGAGCGTTC 1 chrXVI:769084-769486 ( 39) GTTAGCTCAGTTGGTAGAGCGTTC 1 chrXV:340209-340512 ( 33) CGTGGCCCAATGGTCACGGCGTCT 1 chrXII:374175-374554 ( 46) CGTGGCCCAATGGTCACGGCGTCT 1 chrXI:490809-491130 ( 54) CGTGGCCCAATGGTCACGGCGTCT 1 chrIV:619867-620174 ( 43) CGTGGCCCAATGGTCACGGCGTCT 1 chrIV:1352402-1352652 ( 33) GTTGGCGCAATCGGTAGCGCGTAT 1 chrXIII:480524-480836 ( 35) GTTGGCGCAATCGGTAGCGCGTAT 1 chrIX:300160-300443 ( 21) GTTGGCGCAATCGGTAGCGCGTAT 1 chrXVI:581938-582226 ( 35) GTTGGCGCAATCGGTAGCGCGTAT 1 chrVI:226593-226899 ( 36) GTTGGCGCAATCGGTAGCGCGTAT 1 chrVII:122140-122467 ( 21) GTTGGCGCAATCGGTAGCGCGTAT 1 chrV:135333-135644 ( 31) GTTGGCGCAATCGGTAGCGCGTAT 1 chrVII:876241-876553 ( 52) GTTGGCGCAATCGGTAGCGCGTAT 1 chrII:9470-9743 ( 32) GTTGGCCGAGTGGTCTAAGGCGGC 1 chrIV:519631-519888 ( 39) GTTGGCCGAGTGGTCTAAGGCGGC 1 chrXII:962895-963208 ( 26) GTTGGCCGAGTGGTCTAAGGCGGC 1 chrV:469307-469585 ( 66) CGTGGTCTAGTCGGTTATGGCATC 1 chrXI:308041-308359 ( 39) CGTGGTCTAGTCGGTTATGGCATC 1 chrXIII:372359-372620 ( 51) CGTGGTCTAGTCGGTTATGGCATC 1 chrV:438573-438836 ( 51) CGTGGTCTAGTCGGTTATGGCATC 1 chrXV:663687-664020 ( 54) CGTGGTCTAGTCGGTTATGGCATC 1 chrXIII:420461-420797 ( 54) CGTGGTCTAGTCGGTTATGGCATC 1 chrII:36252-36584 ( 35) TTTAGCTCAGTTGGGAGAGCGCCA 1 chrVIII:358394-358695 ( 47) TTTAGCTCAGTTGGGAGAGCGCCA 1 chrVII:440553-440965 ( 70) TTTAGCTCAGTTGGGAGAGCGCCA 1 chrVIII:237771-238091 ( 30) TTTAGCTCAGTTGGGAGAGCGCCA 1 chrXII:628233-628590 ( 27) TTTGGCCGAGCGGTCTAAGGCGCC 1 chrVI:137388-137677 ( 49) CATGGCCAAGTTGGTTAAGGCGTG 1 chrXIV:632488-632737 ( 42) CATGGCCAAGTTGGTTAAGGCGTG 1 chrXIV:102591-102924 ( 14) CATGGCCAAGTTGGTTAAGGCGTG 1 chrIV:802621-802962 ( 33) TATAGTGTAGTGGTTATCACTTTC 1 chrIII:168228-168534 ( 13) TATAGTGTAGTGGTTATCACTTTC 1 chrXII:448490-448867 ( 65) TATAGTGTAGTGGTTATCACTTTC 1 chrIV:520834-521137 ( 42) TATAGTGTAGTGGTTATCACTTTC 1 chrXIII:808154-808462 ( 31) TATAGTGTAGTGGTTATCACTTTC 1 chrV:131021-131279 ( 25) TATAGTGTAGTGGTTATCACTTTC 1 chrVII:930866-931160 ( 32) AGTGGTTTAGTGGTAAAATCCAAC 1 chrIV:992690-992989 ( 48) AGTGGTTTAGTGGTAAAATCCAAC 1 chrXV:226519-226836 ( 26) AGTGGTTTAGTGGTAAAATCCAAC 1 chrIII:142608-142934 ( 22) AGTGGTTTAGTGGTAAAATCCAAC 1 chrXV:282021-282328 ( 45) AGTGGTTTAGTGGTAAAATCCAAC 1 chrXI:84049-84365 ( 56) GTTGGCCGAGTGGTCTAATGCGGC 1 chrXVI:860204-860642 ( 11) AGTGGTTTAGTGGTAAAATCCAAC 1 chrXIV:96120-96452 ( 48) GTTAGTGTAGTGGTTATCATCCCA 1 chrXV:110856-111155 ( 50) GTTAGTGTAGTGGTTATCATCCCA 1 chrI:139029-139334 ( 26) TGTGGTCTAGTGGTATGATTCTCG 1 chrXIV:567995-568268 ( 39) TGTGGTCTAGTGGTATGATTCTCG 1 chrXII:92366-92751 ( 45) TGTGGTCTAGTGGTATGATTCTCG 1 chrX:538459-538559 ( 23) GTTGGCGTAATGGTAACGCGTCTC 1 chrVI:101247-101545 ( 35) TGTGGTCTAGTGGTATGATTCTCG 1 chrVI:210511-210845 ( 51) GGTAGCCAAGTTGGTTTAAGGCGC 1 chrX:390947-391047 ( 9) AGTAGCTCAGTAGGAAGAGCGTCA 1 chrIV:1175664-1176020 ( 42) AGTAGCTCAGTAGGAAGAGCGTCA 1 chrX:422786-422886 ( 62) AGTAGCTCAGTAGGAAGAGCGTCA 1 chrII:405726-406125 ( 8) CGTGGCGTAATGGCAACGCGTCTG 1 chrIV:568747-569114 ( 7) CGTGGCGTAATGGCAACGCGTCTG 1 chrXI:162397-162689 ( 37) CGTGGCGTAATGGCAACGCGTCTG 1 chrVII:736159-736569 ( 31) CGTGGCGTAATGGCAACGCGTCTG 1 chrXI:46656-46951 ( 25) TTTGGCCAAGTGGTAAGGCATCGC 1 chrIV:1256914-1257238 ( 25) AGTGGTTCAGTGGTTAGAATTCAT 1 chrVII:1004099-1004368 ( 38) CTTAGCTTAGTGGTAGAGCGTTGC 1 chrVII:661576-661917 ( 58) CTTAGCTTAGTGGTAGAGCGTTGC 1 chrVIII:466837-467110 ( 72) CTTAGCTTAGTGGTAGAGCGTTGC 1 chrIV:1324612-1325082 ( 22) GTTGGCGGAGCTGGTTCCATCCCA 1 chrXV:594252-594579 ( 32) AGTGGTTCAGTGGTTAGAATTTAT 1 chrXVI:435802-436114 ( 28) TATGGCGCAGTGGTAGCGCAGCAG 1 chrV:99986-100318 ( 36) CGTGGCGCAGTGGAAGCGCGCAGG 1 chrX:517752-517852 ( 22) CGTGGCGCAGTGGAAGCGCGCAGG 1 chrII:642920-643210 ( 35) TATGGCGCAGTGGTAGCGCAGCAG 1 chrIII:149786-150081 ( 42) CGTGGCGCAGTGGAAGCGCGCAGG 1 chrIV:1075351-1075684 ( 49) AATAGTGTAGCGGCTATCACGTTG 1 chrX:204577-204677 ( 34) GATAGTTTAATGGTCAGAATGGGC 1 chrX:541407-541507 ( 24) GATAGTTTAATGGTCAGAATGGGC 1 chrXII:426994-427299 ( 41) GATAGTTTAATGGTCAGAATGGGC 1 chrXIII:463414-463769 ( 18) GATAGTTTAATGGTCAGAATGGGC 1 chrX:355216-355316 ( 45) GATAGTTTAATGGTCAGAATGGGC 1 chrVII:544502-544828 ( 5) GATAGTTTAATGGTCAGAATGGGC 1 chrXIII:362911-363238 ( 45) CTTAGTATAGTGGTTAGTACACAT 1 chrXI:313303-313618 ( 34) CTTAGTATAGTGGTTAGTACACAT 1 chrVII:110499-110812 ( 63) CTTAGTATAGTGGTTAGTACACAT 1 chrV:434467-434768 ( 17) CTTAGTATAGTGGTTAGTACACAT 1 chrIV:1017091-1017423 ( 43) TGTAGTGTAACGGCTATCACATCA 1 chrXIV:631724-632060 ( 47) TGTGGTCTAGAGGTATGATTCTCG 1 chrV:487241-487544 ( 32) TATAGTGTAACGGCTATCACATCA 1 chrV:176952-177328 ( 14) TATAGTGTAACGGCTATCACATCA 1 chrV:354757-355172 ( 25) TATAGTGTAACGGCTATCACATCA 1 chrXIII:290638-290990 ( 42) TATAGTGTAACGGCTATCACATCA 1 chrIII:82361-82660 ( 45) TATAGTGTAACGGCTATCACATCA 1 chrV:354757-355186 ( 18) TATAGTGTAACGGCTATCACATCA 1 chrXII:283096-283805 ( 37) TCTGTCCAAGTTGGTGAAACCCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYSYAGTGGKTARVGCSHHM MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 24 n= 43351 bayes= 6.62168 E= 1.0e-271 -150 77 1 25 -18 -469 80 33 -1368 -1368 -1368 172 1 -1368 182 -1368 -1368 -1368 233 -531 -1368 173 -1368 18 -331 114 73 -55 -150 59 -37 55 172 -1368 -1368 -1368 -36 -1368 195 -1368 -531 -137 -1368 160 -372 -30 157 -40 -1368 -1368 234 -1368 -372 -111 106 64 -50 -69 -269 107 118 -1368 -152 -31 45 -69 77 -122 33 35 56 -199 -36 -88 152 -172 -372 154 52 -131 -185 73 121 -122 -22 56 -60 8 -45 86 -52 -10 -18 112 -37 -99 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYSYAGTGGKTARVGCSHHM MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 24 nsites= 131 E= 1.0e-271 0.106870 0.335878 0.198473 0.358779 0.267176 0.007634 0.343511 0.381679 0.000000 0.000000 0.000000 1.000000 0.305344 0.000000 0.694656 0.000000 0.000000 0.000000 0.992366 0.007634 0.000000 0.656489 0.000000 0.343511 0.030534 0.435115 0.328244 0.206107 0.106870 0.297710 0.152672 0.442748 1.000000 0.000000 0.000000 0.000000 0.236641 0.000000 0.763359 0.000000 0.007634 0.076336 0.000000 0.916031 0.022901 0.160305 0.587786 0.229008 0.000000 0.000000 1.000000 0.000000 0.022901 0.091603 0.412214 0.473282 0.213740 0.122137 0.030534 0.633588 0.687023 0.000000 0.068702 0.244275 0.412214 0.122137 0.335878 0.129771 0.381679 0.251908 0.290076 0.076336 0.236641 0.106870 0.564885 0.091603 0.022901 0.572519 0.282443 0.122137 0.083969 0.328244 0.458015 0.129771 0.259542 0.290076 0.129771 0.320611 0.221374 0.358779 0.137405 0.282443 0.267176 0.427481 0.152672 0.152672 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYSYAGTGGKTARVGCSHHM MEME-1 regular expression -------------------------------------------------------------------------------- [TC][TGA]T[GA]G[CT][CGT][TC]A[GA]T[GT]G[TG][TA][AT][AG][AGC][GA][CG][GC][TCA][CTA][CA] -------------------------------------------------------------------------------- Time 312.86 secs. ******************************************************************************** ******************************************************************************** MOTIF SGGRRTCGAACCSVKGAYCTYHHSRTTAM MEME-2 width = 29 sites = 69 llr = 1378 E-value = 1.9e-280 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYHHSRTTAM MEME-2 Description -------------------------------------------------------------------------------- Simplified A :2:64:::aa::13127:1:132:41162 pos.-specific C 4:::1:8:::a8631::6725443211:5 probability G 67a43::a::::43481:111:1731231 matrix T ::::2a2::::2::4:2427423::7611 bits 2.3 * * * 2.1 * * * 1.9 * * * 1.6 * * **** Relative 1.4 * ****** * * Entropy 1.2 *** ******* * * * (28.8 bits) 0.9 **** ******** * * * 0.7 **** ******** ***** * 0.5 **** **************** ***** 0.2 ***************************** 0.0 ----------------------------- Multilevel GGGAATCGAACCCAGGACCTCCCGATTAC consensus CA GG T GCTATT CTATCG GGA sequence G TA C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYHHSRTTAM MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXII:214786-215079 + 11 1.34e-12 TGGACGCAAC CGGAATCGAACCGATGACCTCTTCCTTGC AAGGGAAGCG chrI:166148-166511 - 22 1.34e-12 TGGACGCAAC CGGAATCGAACCGATGACCTCTTCCTTGC AAGGGAAGCG chrVII:328454-328818 - 30 2.54e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrV:176952-177328 - 42 2.54e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrV:354757-355172 - 53 2.54e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrXIII:290638-290990 - 70 2.54e-12 CG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrIII:82361-82660 + 12 2.54e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrV:354757-355186 - 46 2.54e-12 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTGAA AGCGTGATGT chrIV:1017091-1017423 + 10 2.96e-12 TCCGAAGCG GGGAGTCGAACCCCGGTCTCCACGGTGAG AACGTGATGT chrXIII:480524-480836 + 1 6.26e-12 . GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrXVI:581938-582226 - 64 6.26e-12 CCCTGTAG GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrXVI:819339-819776 - 57 6.26e-12 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTTAT TAGCACGGTG chrVI:226593-226899 + 2 6.26e-12 G GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrVII:122140-122467 - 50 6.26e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATTAA GAGTCATACG chrXVI:880129-880542 + 21 6.26e-12 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTTAT TAGCACGGTG chrII:405726-406125 - 36 7.23e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrIV:568747-569120 - 32 7.23e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrIV:568747-569114 - 35 7.23e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrXI:162397-162689 + 4 7.23e-12 GAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrVII:736159-736569 - 59 7.23e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrVII:405398-405685 - 12 7.23e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATTAG AAGTCAGACG chrIII:295326-295742 - 34 1.45e-11 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrII:266258-266580 - 43 1.45e-11 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrXIV:104694-105013 - 36 1.45e-11 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrXV:113670-113969 - 67 1.45e-11 CCAAT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrX:59006-59106 + 3 1.45e-11 AT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrIX:174925-175190 - 58 1.45e-11 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATTAC TAGTGTGGCG chrXV:282021-282328 - 72 1.90e-11 . CGGAATCGAACCGGGGGCCCAACGATGGC AACGTTGGAT chrXVI:860204-860642 - 38 1.90e-11 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATGGC AACGTTGGAT chrIV:83409-83728 - 62 1.90e-11 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATGGC AACGTTGGAT chrIV:410218-410564 - 72 3.20e-11 . CGGAATCGAACCGGAGACCTCTCCCATGC TAAGGGAGCG chrVIII:146160-146439 + 3 3.20e-11 TC CGGAATCGAACCGGAGACCTCTCCCATGC TAAGGGAGCG chrXVI:856748-857083 - 71 3.20e-11 C CGGAATCGAACCGGAGACCTCTCCCATGC TAAGGGAGCG chrXIV:631724-632060 + 14 3.20e-11 GGGGCGAGCC GGGACTCGAACCCGGGACCTCCCGCACCC TAAGCGAGAA chrXII:656841-657140 + 4 3.20e-11 GTC CGGAATCGAACCGGAGACCTCTCCCATGC TAAGGGAGCG chrX:197201-197301 + 30 3.20e-11 TGGACGAGTC CGGAATCGAACCGGAGACCTCTCCCATGC TAAGGGAGCG chrVIII:388825-388997 + 42 4.67e-11 GGGGCGAGCT GGGAATTGAACCCAGGGCCTCTCGCATGC TTTGTCTTCC chrXII:448490-448867 + 32 3.59e-10 AGGTCCTACC CGGATTCGAACCGGGGTTGTCCGGATCAA AACCGAAAGT chrIV:520834-521137 - 70 3.59e-10 CC CGGATTCGAACCGGGGTTGTCCGGATCAA AACCGAAAGT chrX:538459-538559 - 51 3.98e-10 CGTTCCGTAC GGGACTCGAACCCGCAGTCTTCTCCTTAG GAGGGAGACG chrXV:438500-438879 - 61 4.42e-10 CTCCTCATAG GGGGCTCGAACCCCTGACATTTCGGTATC CTTGCTTAAG chrIV:359449-359802 - 59 4.42e-10 CTCCTCATAG GGGGCTCGAACCCCTGACATTTCGGTATC CTTGCTTAAG chrXI:578816-579253 - 38 4.42e-10 CTCCTCATAG GGGGCTCGAACCCCTGACATTTCGGTATC CTTGCTTAAG chrXIV:96120-96452 + 15 5.97e-10 TGAGCGGTAC GAGAATCGAACCCGTGTCCCCACCTTGGA AGGGTGGGAT chrXV:110856-111155 + 17 5.97e-10 TGAGCGGTAC GAGAATCGAACCCGTGTCCCCACCTTGGA AGGGTGGGAT chrVI:210511-210845 + 1 1.55e-09 . GCGAGTCGAACGCCCGATCTCAAGATTTC GTAGTGGTAA chrIV:946151-946560 - 57 1.55e-09 TCTCCCGGGG GCGAGTCGAACGCCCGATCTCAAGATTTC GTAGTGATAA chrXIII:168679-169068 - 22 1.55e-09 TCTCCCGGGG GCGAGTCGAACGCCCGATCTCAAGATTTC GTAGTGATAA chrVI:137388-137677 + 14 2.87e-09 CGACCCCAGT GAGGGTTGAACTCACGATCTTGCGATTAA CAGTCGCACG chrIV:1075351-1075684 + 15 2.87e-09 TGTTCCAACC GAGGATCGAACTCGGGACCTTTGCCGTGT GAAGGCAACG chrXIV:632488-632737 - 72 2.87e-09 . GAGGGTTGAACTCACGATCTTGCGATTAA CAGTCGCACG chrXIV:102591-102924 - 44 2.87e-09 CGACCCCAGT GAGGGTTGAACTCACGATCTTGCGATTAA CAGTCGCACG chrXI:308041-308359 + 4 4.02e-09 GCC CAGGATCGAACTGGGGACGTTCTGCGTGT TAAGCAGATG chrXIII:372359-372620 + 16 4.02e-09 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGTGT TAAGCAGATG chrXV:663687-664020 + 19 4.02e-09 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGTGT TAAGCAGATG chrXIII:420461-420797 + 19 4.02e-09 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGTGT TAAGCAGATG chrVII:440553-440965 + 17 5.57e-09 TGCGAATTCT GTGGATCGAACACAGGACCTCCAGATAAC TTGACCGAAG chrIV:1175664-1176020 - 71 6.53e-09 G GAGGTTCGAACTCTCGACCTTCAGATTAT GAGACTGACG chrX:204577-204677 - 62 1.04e-08 CTCCGCGACG GGGAATTGAACCCCGATCTGGCACGCGAC AAGCGCCCAT chrX:541407-541507 - 52 1.04e-08 CTCCGCGACG GGGAATTGAACCCCGATCTGGCACGCGAC AAGCGCCCAT chrXII:426994-427299 - 69 1.04e-08 ACG GGGAATTGAACCCCGATCTGGCACGCGAC AAGCGCCCAT chrXIII:463414-463769 - 46 1.04e-08 CTCCGCGACG GGGAATTGAACCCCGATCTGGCACGCGAC AAGCGCCCAT chrVII:1004099-1004368 - 66 1.12e-08 ACCTGT CAGAATTGAACTAACGACCTTTGCATTAC AAGTGCAACG chrV:99986-100318 - 64 2.61e-08 GCGCCGCT CGGTTTCGATCCGAGGACATCAGGGTTAT GAGCCCTGCG chrIII:149786-150081 - 70 2.61e-08 CT CGGTTTCGATCCGAGGACATCAGGGTTAT GAGCCCTGCG chrII:642920-643210 + 2 9.07e-08 T CAGGATCGAACTAAGGACCAACAGATTTG CAATCTGCTG chrIV:619867-620174 + 9 1.58e-07 TCCCCGCC AGGACTTGAACCTGGAATCTTCTGGTTCG TAGCCAGACG chrXI:313303-313618 + 1 1.85e-07 . TAGAATCGAACCAGGGTTTCATCGGCCAC AACGATGTGT chrVII:110499-110812 + 30 1.85e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCATCGGCCAC AACGATGTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYHHSRTTAM MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:214786-215079 1.3e-12 10_[+2]_61 chrI:166148-166511 1.3e-12 21_[-2]_50 chrVII:328454-328818 2.5e-12 29_[-2]_42 chrV:176952-177328 2.5e-12 41_[-2]_30 chrV:354757-355172 2.5e-12 52_[-2]_19 chrXIII:290638-290990 2.5e-12 69_[-2]_2 chrIII:82361-82660 2.5e-12 11_[+2]_60 chrV:354757-355186 2.5e-12 45_[-2]_26 chrIV:1017091-1017423 3e-12 9_[+2]_62 chrXIII:480524-480836 6.3e-12 [+2]_71 chrXVI:581938-582226 6.3e-12 63_[-2]_8 chrXVI:819339-819776 6.3e-12 56_[-2]_15 chrVI:226593-226899 6.3e-12 1_[+2]_70 chrVII:122140-122467 6.3e-12 49_[-2]_22 chrXVI:880129-880542 6.3e-12 20_[+2]_51 chrII:405726-406125 7.2e-12 35_[-2]_36 chrIV:568747-569120 7.2e-12 31_[-2]_40 chrIV:568747-569114 7.2e-12 34_[-2]_37 chrXI:162397-162689 7.2e-12 3_[+2]_68 chrVII:736159-736569 7.2e-12 58_[-2]_13 chrVII:405398-405685 7.2e-12 11_[-2]_60 chrIII:295326-295742 1.5e-11 33_[-2]_38 chrII:266258-266580 1.5e-11 42_[-2]_29 chrXIV:104694-105013 1.5e-11 35_[-2]_36 chrXV:113670-113969 1.5e-11 66_[-2]_5 chrX:59006-59106 1.5e-11 2_[+2]_69 chrIX:174925-175190 1.5e-11 57_[-2]_14 chrXV:282021-282328 1.9e-11 71_[-2] chrXVI:860204-860642 1.9e-11 37_[-2]_34 chrIV:83409-83728 1.9e-11 61_[-2]_10 chrIV:410218-410564 3.2e-11 71_[-2] chrVIII:146160-146439 3.2e-11 2_[+2]_69 chrXVI:856748-857083 3.2e-11 70_[-2]_1 chrXIV:631724-632060 3.2e-11 13_[+2]_58 chrXII:656841-657140 3.2e-11 3_[+2]_68 chrX:197201-197301 3.2e-11 29_[+2]_42 chrVIII:388825-388997 4.7e-11 41_[+2]_30 chrXII:448490-448867 3.6e-10 31_[+2]_40 chrIV:520834-521137 3.6e-10 69_[-2]_2 chrX:538459-538559 4e-10 50_[-2]_21 chrXV:438500-438879 4.4e-10 60_[-2]_11 chrIV:359449-359802 4.4e-10 58_[-2]_13 chrXI:578816-579253 4.4e-10 37_[-2]_34 chrXIV:96120-96452 6e-10 14_[+2]_57 chrXV:110856-111155 6e-10 16_[+2]_55 chrVI:210511-210845 1.5e-09 [+2]_71 chrIV:946151-946560 1.5e-09 56_[-2]_15 chrXIII:168679-169068 1.5e-09 21_[-2]_50 chrVI:137388-137677 2.9e-09 13_[+2]_58 chrIV:1075351-1075684 2.9e-09 14_[+2]_57 chrXIV:632488-632737 2.9e-09 71_[-2] chrXIV:102591-102924 2.9e-09 43_[-2]_28 chrXI:308041-308359 4e-09 3_[+2]_68 chrXIII:372359-372620 4e-09 15_[+2]_56 chrXV:663687-664020 4e-09 18_[+2]_53 chrXIII:420461-420797 4e-09 18_[+2]_53 chrVII:440553-440965 5.6e-09 16_[+2]_55 chrIV:1175664-1176020 6.5e-09 70_[-2]_1 chrX:204577-204677 1e-08 61_[-2]_10 chrX:541407-541507 1e-08 51_[-2]_20 chrXII:426994-427299 1e-08 68_[-2]_3 chrXIII:463414-463769 1e-08 45_[-2]_26 chrVII:1004099-1004368 1.1e-08 65_[-2]_6 chrV:99986-100318 2.6e-08 63_[-2]_8 chrIII:149786-150081 2.6e-08 69_[-2]_2 chrII:642920-643210 9.1e-08 1_[+2]_70 chrIV:619867-620174 1.6e-07 8_[+2]_63 chrXI:313303-313618 1.8e-07 [+2]_71 chrVII:110499-110812 1.8e-07 29_[+2]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYHHSRTTAM MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGGRRTCGAACCSVKGAYCTYHHSRTTAM width=29 seqs=69 chrXII:214786-215079 ( 11) CGGAATCGAACCGATGACCTCTTCCTTGC 1 chrI:166148-166511 ( 22) CGGAATCGAACCGATGACCTCTTCCTTGC 1 chrVII:328454-328818 ( 30) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrV:176952-177328 ( 42) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrV:354757-355172 ( 53) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrXIII:290638-290990 ( 70) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrIII:82361-82660 ( 12) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrV:354757-355186 ( 46) GGGAGTCGAACCCCGGTCTCCACGGTGAA 1 chrIV:1017091-1017423 ( 10) GGGAGTCGAACCCCGGTCTCCACGGTGAG 1 chrXIII:480524-480836 ( 1) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrXVI:581938-582226 ( 64) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrXVI:819339-819776 ( 57) CGGGATCGAACCGCTGATCCCCGCGTTAT 1 chrVI:226593-226899 ( 2) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrVII:122140-122467 ( 50) GGGGCTCGAACCCCTAACCTTATGATTAA 1 chrXVI:880129-880542 ( 21) CGGGATCGAACCGCTGATCCCCGCGTTAT 1 chrII:405726-406125 ( 36) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrIV:568747-569120 ( 32) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrIV:568747-569114 ( 35) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrXI:162397-162689 ( 4) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrVII:736159-736569 ( 59) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrVII:405398-405685 ( 12) GGGGGTCGAACCCATAATCTTCTGATTAG 1 chrIII:295326-295742 ( 34) CGGATTTGAACCGATGATCTCCACATTAC 1 chrII:266258-266580 ( 43) CGGATTTGAACCGATGATCTCCACATTAC 1 chrXIV:104694-105013 ( 36) CGGATTTGAACCGATGATCTCCACATTAC 1 chrXV:113670-113969 ( 67) CGGATTTGAACCGATGATCTCCACATTAC 1 chrX:59006-59106 ( 3) CGGATTTGAACCGATGATCTCCACATTAC 1 chrIX:174925-175190 ( 58) CGGATTTGAACCGATGATCTCCACATTAC 1 chrXV:282021-282328 ( 72) CGGAATCGAACCGGGGGCCCAACGATGGC 1 chrXVI:860204-860642 ( 38) CGGAATCGAACCGGGGGCCCAACGATGGC 1 chrIV:83409-83728 ( 62) CGGAATCGAACCGGGGGCCCAACGATGGC 1 chrIV:410218-410564 ( 72) CGGAATCGAACCGGAGACCTCTCCCATGC 1 chrVIII:146160-146439 ( 3) CGGAATCGAACCGGAGACCTCTCCCATGC 1 chrXVI:856748-857083 ( 71) CGGAATCGAACCGGAGACCTCTCCCATGC 1 chrXIV:631724-632060 ( 14) GGGACTCGAACCCGGGACCTCCCGCACCC 1 chrXII:656841-657140 ( 4) CGGAATCGAACCGGAGACCTCTCCCATGC 1 chrX:197201-197301 ( 30) CGGAATCGAACCGGAGACCTCTCCCATGC 1 chrVIII:388825-388997 ( 42) GGGAATTGAACCCAGGGCCTCTCGCATGC 1 chrXII:448490-448867 ( 32) CGGATTCGAACCGGGGTTGTCCGGATCAA 1 chrIV:520834-521137 ( 70) CGGATTCGAACCGGGGTTGTCCGGATCAA 1 chrX:538459-538559 ( 51) GGGACTCGAACCCGCAGTCTTCTCCTTAG 1 chrXV:438500-438879 ( 61) GGGGCTCGAACCCCTGACATTTCGGTATC 1 chrIV:359449-359802 ( 59) GGGGCTCGAACCCCTGACATTTCGGTATC 1 chrXI:578816-579253 ( 38) GGGGCTCGAACCCCTGACATTTCGGTATC 1 chrXIV:96120-96452 ( 15) GAGAATCGAACCCGTGTCCCCACCTTGGA 1 chrXV:110856-111155 ( 17) GAGAATCGAACCCGTGTCCCCACCTTGGA 1 chrVI:210511-210845 ( 1) GCGAGTCGAACGCCCGATCTCAAGATTTC 1 chrIV:946151-946560 ( 57) GCGAGTCGAACGCCCGATCTCAAGATTTC 1 chrXIII:168679-169068 ( 22) GCGAGTCGAACGCCCGATCTCAAGATTTC 1 chrVI:137388-137677 ( 14) GAGGGTTGAACTCACGATCTTGCGATTAA 1 chrIV:1075351-1075684 ( 15) GAGGATCGAACTCGGGACCTTTGCCGTGT 1 chrXIV:632488-632737 ( 72) GAGGGTTGAACTCACGATCTTGCGATTAA 1 chrXIV:102591-102924 ( 44) GAGGGTTGAACTCACGATCTTGCGATTAA 1 chrXI:308041-308359 ( 4) CAGGATCGAACTGGGGACGTTCTGCGTGT 1 chrXIII:372359-372620 ( 16) CAGGATCGAACTGGGGACGTTCTGCGTGT 1 chrXV:663687-664020 ( 19) CAGGATCGAACTGGGGACGTTCTGCGTGT 1 chrXIII:420461-420797 ( 19) CAGGATCGAACTGGGGACGTTCTGCGTGT 1 chrVII:440553-440965 ( 17) GTGGATCGAACACAGGACCTCCAGATAAC 1 chrIV:1175664-1176020 ( 71) GAGGTTCGAACTCTCGACCTTCAGATTAT 1 chrX:204577-204677 ( 62) GGGAATTGAACCCCGATCTGGCACGCGAC 1 chrX:541407-541507 ( 52) GGGAATTGAACCCCGATCTGGCACGCGAC 1 chrXII:426994-427299 ( 69) GGGAATTGAACCCCGATCTGGCACGCGAC 1 chrXIII:463414-463769 ( 46) GGGAATTGAACCCCGATCTGGCACGCGAC 1 chrVII:1004099-1004368 ( 66) CAGAATTGAACTAACGACCTTTGCATTAC 1 chrV:99986-100318 ( 64) CGGTTTCGATCCGAGGACATCAGGGTTAT 1 chrIII:149786-150081 ( 70) CGGTTTCGATCCGAGGACATCAGGGTTAT 1 chrII:642920-643210 ( 2) CAGGATCGAACTAAGGACCAACAGATTTG 1 chrIV:619867-620174 ( 9) AGGACTTGAACCTGGAATCTTCTGGTTCG 1 chrXI:313303-313618 ( 1) TAGAATCGAACCAGGGTTTCATCGGCCAC 1 chrVII:110499-110812 ( 30) TAGAATCGAACCAGGGTTTCATCGGCCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYHHSRTTAM MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 40536 bayes= 9.28223 E= 1.9e-280 -438 104 148 -338 -48 -218 188 -438 -1275 -1275 234 -1275 97 -1275 93 -338 47 -44 48 -92 -1275 -1275 -1275 172 -1275 196 -1275 -38 -1275 -1275 234 -1275 172 -1275 -1275 -1275 168 -1275 -1275 -338 -1275 234 -1275 -1275 -438 199 -218 -92 -238 148 93 -438 14 76 69 -438 -206 -60 114 26 -38 -1275 196 -1275 117 -1275 -144 -30 -1275 166 -1275 32 -206 172 -118 -68 -438 23 -177 120 -180 132 -177 26 1 114 -218 -48 -38 99 -77 -21 -1275 82 172 -1275 57 14 63 -338 -158 -118 -144 129 -238 -144 23 107 101 -277 40 -158 -30 123 -44 -106 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYHHSRTTAM MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 69 E= 1.9e-280 0.014493 0.405797 0.550725 0.028986 0.217391 0.043478 0.724638 0.014493 0.000000 0.000000 1.000000 0.000000 0.594203 0.000000 0.376812 0.028986 0.420290 0.144928 0.275362 0.159420 0.000000 0.000000 0.000000 1.000000 0.000000 0.768116 0.000000 0.231884 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.971014 0.000000 0.000000 0.028986 0.000000 1.000000 0.000000 0.000000 0.014493 0.782609 0.043478 0.159420 0.057971 0.550725 0.376812 0.014493 0.333333 0.333333 0.318841 0.014493 0.072464 0.130435 0.434783 0.362319 0.231884 0.000000 0.768116 0.000000 0.681159 0.000000 0.072464 0.246377 0.000000 0.623188 0.000000 0.376812 0.072464 0.652174 0.086957 0.188406 0.014493 0.231884 0.057971 0.695652 0.086957 0.492754 0.057971 0.362319 0.304348 0.434783 0.043478 0.217391 0.231884 0.391304 0.115942 0.260870 0.000000 0.347826 0.652174 0.000000 0.449275 0.217391 0.304348 0.028986 0.101449 0.086957 0.072464 0.739130 0.057971 0.072464 0.231884 0.637681 0.608696 0.028986 0.260870 0.101449 0.246377 0.463768 0.144928 0.144928 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYHHSRTTAM MEME-2 regular expression -------------------------------------------------------------------------------- [GC][GA]G[AG][AG]T[CT]GAACC[CG][ACG][GT][GA][AT][CT]C[TC][CT][CAT][CTA][GC][AGC]T[TG][AG][CA] -------------------------------------------------------------------------------- Time 580.58 secs. ******************************************************************************** ******************************************************************************** MOTIF TTYTTTTYYTTYTTTTYCTKM MEME-3 width = 21 sites = 67 llr = 753 E-value = 4.4e-035 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTYTTTTYYTTYTTTTYCTKM MEME-3 Description -------------------------------------------------------------------------------- Simplified A :111:11:11::311:1:3:3 pos.-specific C 1:42221451:4::3:36::4 probability G 1111::::::1::1:112242 matrix T 884587853896797953661 bits 2.3 2.1 1.9 1.6 Relative 1.4 * Entropy 1.2 * * * * (16.2 bits) 0.9 * * * ***** * * 0.7 ** ************ * * 0.5 ** ************** * 0.2 ********************* 0.0 --------------------- Multilevel TTTTTTTTCTTTTTTTTCTTC consensus CC C CT CA C CTAGA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYTTTTYYTTYTTTTYCTKM MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXVI:678896-679300 + 21 6.35e-10 TTTAAAGTAT TTTCTTTCTTTTTTTTCCTGC TACTTACGCT chrXV:896797-897267 + 6 1.96e-09 TTCTC TTCTTTTCTTTCTTTTCTTTC TTTTCTTCCT chrXV:896576-897046 + 68 2.25e-08 GCATCCTTAT TTCTTCTCTTTCTTCTCTTTC TTGGACTTCT chrXVI:795517-795987 - 35 3.10e-08 TTAAGATCTT GGCTTTTCCTTCTTTTCCTTC CACAAAGCCA chrXII:704337-704572 + 39 3.10e-08 AGTTACACTT TTTTTTTCATTTTTTTTTTTC TTTTCTCCTC chrVII:807112-807324 + 33 3.63e-08 TGGAAGACTC TTCGTCTTCTTCTTCTTCGGC GTCCTCAGAT chrX:531676-531776 + 19 3.63e-08 GCTTGCGCAG TTTCTTTTCTTTTTTTCTGGA AAATAAGAAA chrXII:1013552-1014022 + 70 4.24e-08 TGTTTTCTCG TTTCTTTTCTTTTTTTTGTTT TATATCTTAC chrXI:284411-284693 - 17 4.24e-08 GACTTCAGGG TTTTTTTCTTTTTTCTTTTGA AAATTCGTTT chrV:225429-225718 - 26 4.24e-08 CGACCGCCGG CTTTTTTCTTTCTTTTTCTGG AAAAAGAAAA chrXV:254362-254832 - 2 4.24e-08 CTTCAGCGGC TTCTTCTTCCTTTTCTTCTTC A chrXIII:168679-169068 + 65 8.92e-08 GGGAGATATT TTTTTTCCCTTTTTCTCCAGG CCTAGTGAGG chrVII:400224-400694 + 35 1.03e-07 TTAAGTTCTA TTTTTTATTTTTTTTTTCTGG GCCCTGGAGC chrXIII:123134-123604 + 80 1.18e-07 TGGGAACAAG TTAGCTTCCTTCTTTTCCTTC chrXV:866660-866893 + 51 1.55e-07 GTTACACCGG TTTTTCTTTTTTATTTCCAGA GAAGTACAAT chrVII:727549-727796 - 78 1.78e-07 TT GGCTTTTCCTTCTTTTCTTTC CACAAAGCCA chrXIII:163261-163590 - 7 2.03e-07 GTAAATACTG TTATTTTTTTTCTTTTCTGGC TGGGCT chrXIV:722248-722374 - 10 2.31e-07 TATGTTAACT TTTTTTTTTTTTTTTTTGATT CTTTCCAAC chrII:237842-238312 - 69 3.83e-07 CTGTTTGAAC GTTCTCTTTTTCATTTTCTGC TGAAAGCAAG chrIV:769671-770141 - 10 4.33e-07 AACACCTATG CTTGTCTCCTTCTTCTCCGTC GTGGAGACC chrVII:609441-610086 - 4 4.33e-07 CCTTTTTTAG TTCCTTTTTTTTTTCTCCCTC GGT chrVII:706838-707308 - 15 4.88e-07 TTTTGAAGAT GTTCTTTTTTTTTTTTTGGGC CTCATTACAA chrXI:338322-338792 + 5 5.50e-07 CTCC TTTTTTTCATATTTTTCCTTC TTAGCAGGTT chrVI:101247-101545 - 72 6.18e-07 CGCATGCT TTGTCTTCCTGTTTTTTCAGG AAGTCGCCCA chrIV:915890-916132 + 52 7.79e-07 TAGACCTTTC TGTTTTTCCTTTTTATTTTTC TATATATAAT chrIV:541272-541712 - 42 8.73e-07 CAGAGTAGCT TTCATTTTCTTTATTTCTGTT TCTGTTTCGC chrXI:261339-261809 + 66 9.76e-07 GCGACTCTAG TTCCTCTTCATCTGCTTCTGC TTCGTCTGCT chrXIII:754377-754847 - 44 9.76e-07 GCCACAATCC TTCCTCATCTTTTTTTTGAGA CTTTTAACCC chrVII:847786-848256 + 24 1.51e-06 CAACACCCCT TTCTCTTTCATCATCTTCGTA ATCCTTGATG chrIV:1278668-1279138 - 56 1.67e-06 AGTAGCAGTA TTCTTTTCCCTCATCGTCTTA CCATCGTGCC chrIV:579652-580498 + 4 1.86e-06 TAT TTCTTCTTCTGCTATTCCATA CTCTAGAAAT chrXVI:171062-171532 - 59 2.06e-06 TTCCGGAGTT TTCTTTTTTTTTATTTGGGGT AATTTGGAGG chrXI:259521-259776 + 2 2.52e-06 T TTGATTCTTTTCTTTTCGTTA ATATATTTTT chrXIII:552878-553015 + 27 2.78e-06 GGGATTATTT TTCGCTCTTTTCATTTTCTTA TAATTGTATA chrII:141831-142301 + 10 2.78e-06 TCAATTTTA TGTATTTTTTTTTTCTTTTGG TATAGCATTG chrXIV:174264-174384 + 75 3.38e-06 TGCTTTCCGG TTCCTTTCCTGTAACTCGTGC TTGGA chrXII:796471-796786 - 64 3.38e-06 GGAAATTAAT TTGTCTTCTATCTTTTGCATC CGTGCCTCCT chrXV:384770-384996 + 53 3.38e-06 CGATGTAAAG TTAATTTCCCTTTTTTTCGGT TGGGCTGGAG chrXII:962895-963208 - 71 4.09e-06 TGGATGGTG TTTGTATCCTGTATTTCCTTG TTGTTGTATT chrXV:680431-680901 + 24 4.49e-06 TGCACAAGAA TAACTTCTCTTCTTTTTCTTG AAATAAAGGC chrIX:394779-395098 - 50 4.49e-06 GGAAAAAAAA GGCTTTTTCTTTTTTGCCTTT CAGTTTCTCG chrXII:242415-242885 + 63 4.49e-06 ATAATTTATC TTTCCTCTCTTTTTTTAGGTC CACCAAGAAC chrVI:64161-64307 + 62 4.49e-06 TGTCTATTTA TTCATCATCCTCTTCTTCGTC AGCATCTTCA chrIII:246655-246997 - 20 5.91e-06 GATGTCTATT CACCTTTTCTTCATTTTTTGG AAACTATACC chrIV:1402992-1403301 + 71 5.91e-06 TTGTTCATTT TTATTATCCTTTATTTACTTG TAAAAAAAC chrVII:518614-519084 - 67 6.46e-06 GACTAGATGT TTCACTTCCTTCTGTTGTTGA AGACGATGCG chrXII:639381-640118 - 41 6.46e-06 TTTATCTTCT TCGTCTTCCTTCTTTTCGATT CTTGGACCAG chrXIII:550121-550260 + 69 7.06e-06 ATTTAATTTA TTTCTTCTTTTCAGCTTCAGC TTCAGCCTTC chrI:139029-139334 - 63 7.70e-06 CTCGCATGCT TTGTCTTCCTGTTTATTCAGG AAGTCGCCCA chrVIII:388825-388997 + 72 7.70e-06 CTCGCATGCT TTGTCTTCCTGTTTATTCAGG AAGTCGCC chrXIII:408450-408797 - 17 9.15e-06 GTACGTAGTT TTACTTTTAATTTTTTTTTTA TCGCGCGTTG chrXV:1006622-1007092 - 47 1.08e-05 ACGGTTTAGT TGTTTTTCATTTATTTATTTA TGGTTGTTTA chrII:256450-256920 - 52 1.28e-05 TCTAGCCAAC TTGATATCCTTCTTTTGGATA GTGACACGCT chrIV:117246-117520 + 63 1.50e-05 ACACCCATAA CTTTTTACATTTATTTTTTTA TCACATAATA chrXII:128461-128931 - 62 1.75e-05 GTCTAAATCT TTCTTTTAATTTTTCGTCATA TTCTAATTTA chrXIV:628706-628976 + 19 1.89e-05 ATTATACATT TTTTTATTATTTTTTTATATA TTAAAGTTAA chrV:85734-86787 + 42 2.04e-05 GGTTTTTTTC TTTGCAATTTTTTTTTCGTTC TCCTAAAGCA chrII:592952-593230 - 12 2.04e-05 TTGAACTCCA TACATCTTATTTTTTTGCTGT TTTTTTTCAG chrXIII:808154-808462 + 60 2.21e-05 CTATAGGACC TTTTTCTTCTGTTGTTAGTGT ACACTAAAAC chrVII:364901-365371 + 50 2.21e-05 CTCTCTGGTC TATTTTACTTTCTATTTCTTT TCTTATAATC chrII:393469-393611 + 25 2.96e-05 AAACAGCTAA CTCATCTACTTCTATTCCATC TTCATGTAGT chrVII:534865-535158 + 75 3.18e-05 ATATAGAATT TTGCTTTATATTATTTTGAGC GGGCT chrXIII:296994-298850 + 6 3.18e-05 GAATG GATTTTTTTCTCATTTTCGTA TAATTATGTG chrIX:388229-388516 + 40 3.41e-05 GCGGGCCCCT TTTTTCTTCTATATCTATTTA TTATCTAAAT chrXVI:303677-303876 - 28 3.92e-05 ATTCAGAGAA TCTTTCTTCATCATCGTCAGC TAATTCTTCC chrXVI:718416-719228 - 77 4.20e-05 TTT CTTATTTCAATTTATTCCTTA TCAGTTGATT chrXV:832434-832717 + 30 4.49e-05 AGCAATAGCT TCCTTTACTATTTTATTCTTA AGGAGAACTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYTTTTYYTTYTTTTYCTKM MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:678896-679300 6.4e-10 20_[+3]_59 chrXV:896797-897267 2e-09 5_[+3]_74 chrXV:896576-897046 2.3e-08 67_[+3]_12 chrXVI:795517-795987 3.1e-08 34_[-3]_45 chrXII:704337-704572 3.1e-08 38_[+3]_41 chrVII:807112-807324 3.6e-08 32_[+3]_47 chrX:531676-531776 3.6e-08 18_[+3]_61 chrXII:1013552-1014022 4.2e-08 69_[+3]_10 chrXI:284411-284693 4.2e-08 16_[-3]_63 chrV:225429-225718 4.2e-08 25_[-3]_54 chrXV:254362-254832 4.2e-08 1_[-3]_78 chrXIII:168679-169068 8.9e-08 64_[+3]_15 chrVII:400224-400694 1e-07 34_[+3]_45 chrXIII:123134-123604 1.2e-07 79_[+3] chrXV:866660-866893 1.6e-07 50_[+3]_29 chrVII:727549-727796 1.8e-07 77_[-3]_2 chrXIII:163261-163590 2e-07 6_[-3]_73 chrXIV:722248-722374 2.3e-07 9_[-3]_70 chrII:237842-238312 3.8e-07 68_[-3]_11 chrIV:769671-770141 4.3e-07 9_[-3]_70 chrVII:609441-610086 4.3e-07 3_[-3]_76 chrVII:706838-707308 4.9e-07 14_[-3]_65 chrXI:338322-338792 5.5e-07 4_[+3]_75 chrVI:101247-101545 6.2e-07 71_[-3]_8 chrIV:915890-916132 7.8e-07 51_[+3]_28 chrIV:541272-541712 8.7e-07 41_[-3]_38 chrXI:261339-261809 9.8e-07 65_[+3]_14 chrXIII:754377-754847 9.8e-07 43_[-3]_36 chrVII:847786-848256 1.5e-06 23_[+3]_56 chrIV:1278668-1279138 1.7e-06 55_[-3]_24 chrIV:579652-580498 1.9e-06 3_[+3]_76 chrXVI:171062-171532 2.1e-06 58_[-3]_21 chrXI:259521-259776 2.5e-06 1_[+3]_78 chrXIII:552878-553015 2.8e-06 26_[+3]_53 chrII:141831-142301 2.8e-06 9_[+3]_70 chrXIV:174264-174384 3.4e-06 74_[+3]_5 chrXII:796471-796786 3.4e-06 63_[-3]_16 chrXV:384770-384996 3.4e-06 52_[+3]_27 chrXII:962895-963208 4.1e-06 70_[-3]_9 chrXV:680431-680901 4.5e-06 23_[+3]_56 chrIX:394779-395098 4.5e-06 49_[-3]_30 chrXII:242415-242885 4.5e-06 62_[+3]_17 chrVI:64161-64307 4.5e-06 61_[+3]_18 chrIII:246655-246997 5.9e-06 19_[-3]_60 chrIV:1402992-1403301 5.9e-06 70_[+3]_9 chrVII:518614-519084 6.5e-06 66_[-3]_13 chrXII:639381-640118 6.5e-06 40_[-3]_39 chrXIII:550121-550260 7.1e-06 68_[+3]_11 chrI:139029-139334 7.7e-06 62_[-3]_17 chrVIII:388825-388997 7.7e-06 71_[+3]_8 chrXIII:408450-408797 9.1e-06 16_[-3]_63 chrXV:1006622-1007092 1.1e-05 46_[-3]_33 chrII:256450-256920 1.3e-05 51_[-3]_28 chrIV:117246-117520 1.5e-05 62_[+3]_17 chrXII:128461-128931 1.8e-05 61_[-3]_18 chrXIV:628706-628976 1.9e-05 18_[+3]_61 chrV:85734-86787 2e-05 41_[+3]_38 chrII:592952-593230 2e-05 11_[-3]_68 chrXIII:808154-808462 2.2e-05 59_[+3]_20 chrVII:364901-365371 2.2e-05 49_[+3]_30 chrII:393469-393611 3e-05 24_[+3]_55 chrVII:534865-535158 3.2e-05 74_[+3]_5 chrXIII:296994-298850 3.2e-05 5_[+3]_74 chrIX:388229-388516 3.4e-05 39_[+3]_40 chrXVI:303677-303876 3.9e-05 27_[-3]_52 chrXVI:718416-719228 4.2e-05 76_[-3]_3 chrXV:832434-832717 4.5e-05 29_[+3]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYTTTTYYTTYTTTTYCTKM MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTYTTTTYYTTYTTTTYCTKM width=21 seqs=67 chrXVI:678896-679300 ( 21) TTTCTTTCTTTTTTTTCCTGC 1 chrXV:896797-897267 ( 6) TTCTTTTCTTTCTTTTCTTTC 1 chrXV:896576-897046 ( 68) TTCTTCTCTTTCTTCTCTTTC 1 chrXVI:795517-795987 ( 35) GGCTTTTCCTTCTTTTCCTTC 1 chrXII:704337-704572 ( 39) TTTTTTTCATTTTTTTTTTTC 1 chrVII:807112-807324 ( 33) TTCGTCTTCTTCTTCTTCGGC 1 chrX:531676-531776 ( 19) TTTCTTTTCTTTTTTTCTGGA 1 chrXII:1013552-1014022 ( 70) TTTCTTTTCTTTTTTTTGTTT 1 chrXI:284411-284693 ( 17) TTTTTTTCTTTTTTCTTTTGA 1 chrV:225429-225718 ( 26) CTTTTTTCTTTCTTTTTCTGG 1 chrXV:254362-254832 ( 2) TTCTTCTTCCTTTTCTTCTTC 1 chrXIII:168679-169068 ( 65) TTTTTTCCCTTTTTCTCCAGG 1 chrVII:400224-400694 ( 35) TTTTTTATTTTTTTTTTCTGG 1 chrXIII:123134-123604 ( 80) TTAGCTTCCTTCTTTTCCTTC 1 chrXV:866660-866893 ( 51) TTTTTCTTTTTTATTTCCAGA 1 chrVII:727549-727796 ( 78) GGCTTTTCCTTCTTTTCTTTC 1 chrXIII:163261-163590 ( 7) TTATTTTTTTTCTTTTCTGGC 1 chrXIV:722248-722374 ( 10) TTTTTTTTTTTTTTTTTGATT 1 chrII:237842-238312 ( 69) GTTCTCTTTTTCATTTTCTGC 1 chrIV:769671-770141 ( 10) CTTGTCTCCTTCTTCTCCGTC 1 chrVII:609441-610086 ( 4) TTCCTTTTTTTTTTCTCCCTC 1 chrVII:706838-707308 ( 15) GTTCTTTTTTTTTTTTTGGGC 1 chrXI:338322-338792 ( 5) TTTTTTTCATATTTTTCCTTC 1 chrVI:101247-101545 ( 72) TTGTCTTCCTGTTTTTTCAGG 1 chrIV:915890-916132 ( 52) TGTTTTTCCTTTTTATTTTTC 1 chrIV:541272-541712 ( 42) TTCATTTTCTTTATTTCTGTT 1 chrXI:261339-261809 ( 66) TTCCTCTTCATCTGCTTCTGC 1 chrXIII:754377-754847 ( 44) TTCCTCATCTTTTTTTTGAGA 1 chrVII:847786-848256 ( 24) TTCTCTTTCATCATCTTCGTA 1 chrIV:1278668-1279138 ( 56) TTCTTTTCCCTCATCGTCTTA 1 chrIV:579652-580498 ( 4) TTCTTCTTCTGCTATTCCATA 1 chrXVI:171062-171532 ( 59) TTCTTTTTTTTTATTTGGGGT 1 chrXI:259521-259776 ( 2) TTGATTCTTTTCTTTTCGTTA 1 chrXIII:552878-553015 ( 27) TTCGCTCTTTTCATTTTCTTA 1 chrII:141831-142301 ( 10) TGTATTTTTTTTTTCTTTTGG 1 chrXIV:174264-174384 ( 75) TTCCTTTCCTGTAACTCGTGC 1 chrXII:796471-796786 ( 64) TTGTCTTCTATCTTTTGCATC 1 chrXV:384770-384996 ( 53) TTAATTTCCCTTTTTTTCGGT 1 chrXII:962895-963208 ( 71) TTTGTATCCTGTATTTCCTTG 1 chrXV:680431-680901 ( 24) TAACTTCTCTTCTTTTTCTTG 1 chrIX:394779-395098 ( 50) GGCTTTTTCTTTTTTGCCTTT 1 chrXII:242415-242885 ( 63) TTTCCTCTCTTTTTTTAGGTC 1 chrVI:64161-64307 ( 62) TTCATCATCCTCTTCTTCGTC 1 chrIII:246655-246997 ( 20) CACCTTTTCTTCATTTTTTGG 1 chrIV:1402992-1403301 ( 71) TTATTATCCTTTATTTACTTG 1 chrVII:518614-519084 ( 67) TTCACTTCCTTCTGTTGTTGA 1 chrXII:639381-640118 ( 41) TCGTCTTCCTTCTTTTCGATT 1 chrXIII:550121-550260 ( 69) TTTCTTCTTTTCAGCTTCAGC 1 chrI:139029-139334 ( 63) TTGTCTTCCTGTTTATTCAGG 1 chrVIII:388825-388997 ( 72) TTGTCTTCCTGTTTATTCAGG 1 chrXIII:408450-408797 ( 17) TTACTTTTAATTTTTTTTTTA 1 chrXV:1006622-1007092 ( 47) TGTTTTTCATTTATTTATTTA 1 chrII:256450-256920 ( 52) TTGATATCCTTCTTTTGGATA 1 chrIV:117246-117520 ( 63) CTTTTTACATTTATTTTTTTA 1 chrXII:128461-128931 ( 62) TTCTTTTAATTTTTCGTCATA 1 chrXIV:628706-628976 ( 19) TTTTTATTATTTTTTTATATA 1 chrV:85734-86787 ( 42) TTTGCAATTTTTTTTTCGTTC 1 chrII:592952-593230 ( 12) TACATCTTATTTTTTTGCTGT 1 chrXIII:808154-808462 ( 60) TTTTTCTTCTGTTGTTAGTGT 1 chrVII:364901-365371 ( 50) TATTTTACTTTCTATTTCTTT 1 chrII:393469-393611 ( 25) CTCATCTACTTCTATTCCATC 1 chrVII:534865-535158 ( 75) TTGCTTTATATTATTTTGAGC 1 chrXIII:296994-298850 ( 6) GATTTTTTTCTCATTTTCGTA 1 chrIX:388229-388516 ( 40) TTTTTCTTCTATATCTATTTA 1 chrXVI:303677-303876 ( 28) TCTTTCTTCATCATCGTCAGC 1 chrXVI:718416-719228 ( 77) CTTATTTCAATTTATTCCTTA 1 chrXV:832434-832717 ( 30) TCCTTTACTATTTTATTCTTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYTTTTYYTTYTTTTYCTKM MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 45040 bayes= 10.1723 E= 4.4e-035 -1271 -114 -114 144 -202 -214 -114 139 -176 86 -72 52 -102 18 -114 83 -1271 -27 -1271 147 -202 18 -1271 121 -153 -114 -1271 141 -276 118 -1271 75 -117 140 -1271 18 -134 -140 -1271 141 -334 -1271 -92 152 -1271 108 -1271 94 -17 -1271 -1271 127 -202 -1271 -172 152 -234 36 -1271 118 -1271 -1271 -172 164 -176 80 -140 70 -1271 148 -2 -25 -25 -372 -14 87 -1271 -1271 103 98 -2 98 -27 -102 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYTTTTYYTTYTTTTYCTKM MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 67 E= 4.4e-035 0.000000 0.089552 0.089552 0.820896 0.074627 0.044776 0.089552 0.791045 0.089552 0.358209 0.119403 0.432836 0.149254 0.223881 0.089552 0.537313 0.000000 0.164179 0.000000 0.835821 0.074627 0.223881 0.000000 0.701493 0.104478 0.089552 0.000000 0.805970 0.044776 0.447761 0.000000 0.507463 0.134328 0.522388 0.000000 0.343284 0.119403 0.074627 0.000000 0.805970 0.029851 0.000000 0.104478 0.865672 0.000000 0.417910 0.000000 0.582090 0.268657 0.000000 0.000000 0.731343 0.074627 0.000000 0.059701 0.865672 0.059701 0.253731 0.000000 0.686567 0.000000 0.000000 0.059701 0.940299 0.089552 0.343284 0.074627 0.492537 0.000000 0.552239 0.194030 0.253731 0.253731 0.014925 0.179104 0.552239 0.000000 0.000000 0.402985 0.597015 0.298507 0.388060 0.164179 0.149254 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYTTTTYYTTYTTTTYCTKM MEME-3 regular expression -------------------------------------------------------------------------------- TT[TC][TC]T[TC]T[TC][CT]TT[TC][TA]T[TC]T[TC][CT][TA][TG][CA] -------------------------------------------------------------------------------- Time 848.79 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:617759-617859 4.19e-05 48_[+1(6.31e-09)]_28 chrIX:174925-175190 1.48e-13 28_[+1(1.83e-09)]_5_[-2(1.45e-11)]_\ 14 chrVIII:493151-493621 8.40e-02 100 chrXV:110856-111155 1.12e-09 16_[+2(5.97e-10)]_4_[-1(8.35e-07)]_\ 27 chrV:269272-269742 3.59e-01 100 chrVIII:375363-375764 8.23e-01 100 chrVII:544502-544828 2.19e-02 4_[-1(9.79e-06)]_72 chrXIII:220601-221071 7.39e-01 100 chrII:391405-391875 9.32e-01 100 chrXV:832434-832717 1.04e-01 29_[+3(4.49e-05)]_50 chrX:197201-197301 2.73e-16 29_[+2(3.20e-11)]_5_[-1(2.01e-11)]_\ 13 chrXVI:75290-75760 3.08e-01 100 chrI:166148-166511 2.17e-09 21_[-2(1.34e-12)]_50 chrIX:210475-210876 2.80e-05 44_[+1(1.51e-09)]_32 chrXVI:403457-403927 9.05e-01 100 chrIV:1305461-1305787 3.71e-06 60_[+1(2.96e-10)]_16 chrXIII:226048-226518 3.61e-02 21_[+3(7.97e-05)]_58 chrXII:656841-657140 4.67e-15 3_[+2(3.20e-11)]_5_[-1(2.01e-11)]_\ 39 chrXIII:550121-550260 3.22e-02 20_[-3(4.49e-05)]_27_[+3(7.06e-06)]_\ 11 chrXII:592427-592769 1.52e-05 42_[-1(6.31e-09)]_34 chrIII:107198-107609 3.86e-02 100 chrIV:83409-83728 1.28e-10 34_[+1(6.85e-07)]_3_[-2(1.90e-11)]_\ 10 chrXVI:860204-860642 1.15e-11 10_[+1(6.85e-07)]_3_[-2(1.90e-11)]_\ 34 chrXV:254362-254832 2.76e-04 1_[-3(4.24e-08)]_78 chrXIII:667666-668136 2.70e-01 100 chrXI:356146-356381 1.85e-01 100 chrXII:637019-638458 2.16e-01 100 chrV:141054-141341 2.21e-01 100 chrXV:1027940-1028354 6.82e-01 100 chrVII:961055-961525 4.39e-01 100 chrXV:977790-978260 7.98e-01 100 chrX:422786-422886 5.21e-04 61_[+1(1.22e-06)]_15 chrVII:847106-847576 8.43e-01 100 chrIV:538881-539241 3.33e-01 100 chrXII:784195-784558 1.61e-05 32_[+1(2.20e-09)]_44 chrIX:265054-265524 8.85e-01 100 chrXVI:689413-689796 1.97e-06 15_[+1(1.89e-10)]_61 chrV:354757-355186 4.85e-10 17_[+1(2.34e-05)]_4_[-2(2.54e-12)]_\ 26 chrII:605784-606088 2.19e-01 100 chrXII:95398-95868 1.71e-01 100 chrV:117697-118225 8.22e-01 100 chrI:71938-73305 7.22e-02 100 chrXV:159228-160197 6.15e-01 100 chrIV:555765-556207 8.97e-02 100 chrXVI:718416-719228 1.02e-01 76_[-3(4.20e-05)]_3 chrXVI:171062-171532 5.67e-03 58_[-3(2.06e-06)]_21 chrXVI:407191-407661 1.11e-02 63_[-1(1.79e-05)]_13 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8.41e-01 100 chrXIII:91086-91556 6.41e-01 100 chrXIV:776785-776915 8.64e-01 100 chrXIII:420461-420797 1.95e-09 18_[+2(4.02e-09)]_6_[-1(7.80e-08)]_\ 23 chrXVI:678896-679300 1.18e-06 20_[+3(6.35e-10)]_59 chrXVI:39997-40467 3.82e-01 100 chrXV:896797-897267 1.33e-06 5_[+3(1.96e-09)]_74 chrXIII:408450-408797 5.72e-04 16_[-3(9.15e-06)]_18_[+2(3.61e-05)]_\ 16 chrII:255146-255487 3.62e-01 100 chrVII:908274-908744 4.67e-01 100 chrV:53634-53813 9.38e-01 100 chrXV:87316-87786 4.05e-01 100 chrIV:914257-914492 1.27e-01 100 chrVII:610894-611364 8.95e-01 100 chrVII:914868-915175 3.75e-01 100 chrXI:364874-365151 3.66e-01 100 chrXV:978736-979206 8.00e-01 100 chrXI:313303-313618 6.40e-06 [+2(1.85e-07)]_4_[-1(1.18e-05)]_43 chrXII:242415-242885 2.30e-02 62_[+3(4.49e-06)]_17 chrXIII:162113-162342 5.46e-01 100 chrIII:137982-138624 5.43e-01 100 chrXIII:808154-808462 4.84e-06 30_[-1(5.60e-07)]_5_[+3(2.21e-05)]_\ 20 chrVII:788379-788669 5.80e-01 100 chrXIV:568288-568461 7.07e-01 100 chrVIII:104468-104938 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70_[-1(4.83e-05)]_6 chrIV:568747-569120 1.25e-10 3_[+1(2.66e-06)]_4_[-2(7.23e-12)]_\ 40 chrVII:847786-848256 1.01e-02 23_[+3(1.51e-06)]_56 chrXIII:250314-250784 7.35e-01 100 chrXII:241751-241895 3.83e-01 100 chrXIII:290638-290990 4.32e-10 41_[+1(2.34e-05)]_4_[-2(2.54e-12)]_\ 2 chrXII:92366-92751 2.27e-03 44_[+1(9.20e-07)]_32 chrXIV:716172-716537 2.09e-01 100 chrXIII:67713-67837 5.52e-01 100 chrV:85734-86787 4.07e-02 41_[+3(2.04e-05)]_38 chrXI:38713-39183 3.09e-01 100 chrXV:671035-671452 8.81e-01 100 chrVII:255191-255373 3.12e-01 100 chrXVI:75506-75976 3.57e-01 100 chrXIV:567995-568268 7.58e-05 38_[+1(9.20e-07)]_38 chrVIII:160229-160699 6.70e-01 100 chrXIII:162416-162704 7.53e-01 100 chrIX:141970-142440 5.03e-01 100 chrVI:75300-75770 9.21e-01 100 chrXIII:552878-553015 1.21e-02 26_[+3(2.78e-06)]_53 chrXIV:174264-174384 1.05e-02 74_[+3(3.38e-06)]_5 chrXII:374175-374554 7.15e-06 45_[+1(1.03e-08)]_31 chrXI:302769-303074 4.90e-03 51_[+1(1.18e-05)]_25 chrII:405726-406125 1.25e-10 7_[+1(2.66e-06)]_4_[-2(7.23e-12)]_\ 36 chrV:236376-236624 9.80e-01 100 chrXV:232014-232484 3.72e-01 100 chrXVI:113690-114160 8.62e-01 100 chrXV:353961-354249 1.15e-05 29_[-1(1.83e-09)]_47 chrXVI:173350-173740 1.70e-01 100 chrXV:760580-761050 5.60e-01 100 chrVII:400224-400694 3.27e-04 34_[+3(1.03e-07)]_45 chrXIII:163843-164313 9.18e-01 100 chrV:483329-483799 8.11e-01 100 chrV:167022-167492 2.34e-01 100 chrV:135333-135644 2.00e-04 30_[-1(3.44e-08)]_46 chrVII:556745-557215 1.38e-01 100 chrXV:904120-904590 4.76e-02 100 chrXIV:442875-443286 1.72e-02 50_[-2(9.13e-05)]_21 chrVII:877272-877742 3.68e-01 100 chrV:354757-355172 4.85e-10 24_[+1(2.34e-05)]_4_[-2(2.54e-12)]_\ 19 chrXV:216296-216639 9.71e-01 100 chrVII:771867-772337 5.19e-01 100 chrIV:1236636-1236784 7.72e-01 100 chrIV:472671-473141 9.61e-01 100 chrVIII:116006-116334 8.00e-06 30_[-1(1.83e-09)]_46 chrXII:806165-806635 5.06e-01 100 chrXII:952096-952566 4.98e-01 100 chrII:197337-197633 2.56e-05 63_[+1(1.51e-09)]_13 chrXIV:96120-96452 3.81e-09 14_[+2(5.97e-10)]_4_[-1(8.35e-07)]_\ 29 chrXV:620585-620863 2.63e-01 100 chrXVI:880129-880542 1.45e-13 20_[+2(6.26e-12)]_6_[-1(1.51e-09)]_\ 21 chrXV:282021-282328 4.94e-11 44_[+1(6.85e-07)]_3_[-2(1.90e-11)] chrV:438573-438836 1.70e-04 50_[+1(7.80e-08)]_26 chrVII:122140-122467 2.11e-12 20_[+1(3.44e-08)]_5_[-2(6.26e-12)]_\ 22 chrIV:946151-946560 1.29e-08 11_[+1(1.22e-06)]_21_[-2(1.55e-09)]_\ 15 chrXV:92001-92471 1.09e-01 100 chrXIV:86755-87225 1.34e-02 100 chrXV:505218-505424 7.86e-01 100 chrXII:506324-506794 9.72e-01 100 chrIV:427530-428000 4.65e-01 100 chrX:523898-523998 4.05e-06 32_[-1(2.96e-10)]_44 chrVII:847525-847995 4.72e-02 100 chrXV:795745-796215 2.56e-01 100 chrI:141632-141913 9.98e-01 100 chrXII:448490-448867 1.18e-09 31_[+2(3.59e-10)]_4_[-1(5.60e-07)]_\ 12 chrXII:837671-839026 4.84e-01 100 chrXV:730002-730472 5.97e-01 100 chrXII:922188-922489 4.44e-01 100 chrV:266238-266708 2.31e-01 100 chrXIII:372359-372620 2.41e-09 15_[+2(4.02e-09)]_6_[-1(7.80e-08)]_\ 26 chrIV:306707-307177 6.42e-01 100 chrV:77582-77826 9.12e-01 100 chrXII:806498-806840 6.01e-01 100 chrIV:519631-519888 3.06e-05 38_[+1(6.84e-08)]_38 chrXVI:76435-76649 2.17e-01 100 chrXV:382896-383366 5.21e-01 100 chrXIV:414511-414782 9.19e-01 100 chrX:123425-123525 2.65e-01 100 chrXIII:225453-225666 4.08e-01 100 chrXV:877822-877989 7.79e-01 100 chrXV:506467-506595 2.93e-01 100 chrXII:366109-366428 1.55e-02 63_[+2(1.86e-05)]_8 chrIX:323192-323662 6.00e-01 100 chrIX:177663-177935 7.01e-01 100 chrVIII:451302-453009 5.38e-01 100 chrIX:324200-324361 1.33e-01 100 chrXII:47900-48370 2.34e-01 100 chrX:541407-541507 4.81e-07 23_[+1(9.79e-06)]_4_[-2(1.04e-08)]_\ 20 chrVI:226593-226899 2.11e-12 1_[+2(6.26e-12)]_5_[-1(3.44e-08)]_\ 41 chrVI:223214-223684 5.21e-01 100 chrXVI:280509-281450 2.76e-01 100 chrVII:311215-312227 2.67e-01 100 chrXVI:188661-188926 4.13e-01 100 chrVIII:127126-127596 4.67e-01 100 chrXV:274499-274881 1.74e-05 37_[+1(2.20e-09)]_39 chrXIII:731965-732435 6.59e-01 100 chrXV:340209-340512 3.93e-05 32_[-1(1.03e-08)]_44 chrXII:128186-128656 1.39e-01 100 chrXII:1013552-1014022 2.42e-04 69_[+3(4.24e-08)]_10 chrIII:57711-58181 4.00e-01 100 chrXIII:220402-220872 3.43e-01 100 chrXIV:502193-502663 5.55e-01 100 chrIV:1175664-1176020 3.14e-08 41_[+1(1.22e-06)]_5_[-2(6.53e-09)]_\ 1 chrV:122294-122764 6.43e-02 100 chrXII:645780-646250 4.59e-01 100 chrXI:46656-46951 1.39e-03 24_[-1(3.12e-06)]_52 chrXII:710699-710862 3.56e-01 100 chrVI:225384-225854 1.54e-01 100 chrIII:168228-168534 4.17e-04 12_[-1(5.60e-07)]_64 chrVII:561551-561714 9.49e-01 100 chrIX:183348-183667 2.62e-05 27_[-1(1.51e-09)]_49 chrIX:69156-69626 4.36e-01 100 chrXV:234268-234738 5.15e-02 100 chrXVI:654381-654851 6.64e-01 100 chrVII:440553-440965 6.57e-09 16_[+2(5.57e-09)]_24_[-1(1.65e-07)]_\ 7 chrXV:866660-866893 7.89e-05 50_[+3(1.55e-07)]_29 chrIV:1324612-1325082 2.64e-04 21_[-1(4.25e-06)]_55 chrXIII:302830-303070 7.57e-01 100 chrV:99986-100318 8.84e-07 35_[+1(7.52e-06)]_4_[-2(2.61e-08)]_\ 8 chrXI:558878-559006 8.55e-01 100 chrVII:968732-969202 5.20e-01 100 chrIV:434194-434456 3.88e-06 32_[-1(1.83e-09)]_44 chrVIII:411216-411670 2.27e-01 100 chrXV:900293-900415 6.38e-01 100 chrIII:142608-142934 8.80e-04 21_[-1(6.85e-07)]_55 chrV:51948-52418 1.82e-01 100 chrIV:1256914-1257238 1.66e-02 24_[-1(3.38e-06)]_52 chrIV:1233710-1234056 9.96e-01 100 chrXVI:404851-405801 9.00e-01 100 chrXIV:63677-64012 5.06e-01 100 chrIX:316199-316541 8.03e-01 100 chrII:88897-89367 9.64e-01 100 chrX:348885-348985 9.08e-01 100 chrXIV:253163-253633 7.43e-03 15_[-2(1.09e-05)]_56 chrVIII:146160-146439 4.67e-15 2_[+2(3.20e-11)]_5_[-1(2.01e-11)]_\ 40 chrXVI:769084-769486 9.75e-05 38_[-1(1.03e-08)]_38 chrIII:217353-217823 7.53e-01 100 chrXII:737672-738142 7.65e-01 100 chrXII:283096-283805 3.10e-02 36_[-1(5.74e-05)]_40 chrIV:802621-802962 1.95e-04 32_[-1(5.60e-07)]_44 chrVIII:358394-358695 1.02e-03 46_[-1(1.65e-07)]_30 chrVIII:488202-488672 1.01e-01 100 chrXVI:435802-436114 4.73e-03 27_[-1(7.52e-06)]_49 chrXV:680431-680901 8.23e-03 23_[+3(4.49e-06)]_56 chrV:396317-396473 5.36e-01 100 chrIV:118461-118692 3.11e-01 100 chrX:703344-703444 4.79e-01 100 chrXV:925073-925543 1.66e-01 100 chrXIII:504927-505100 1.19e-02 6_[-2(9.13e-05)]_65 chrXIV:663092-663562 3.87e-01 100 chrXII:515333-515803 2.18e-01 100 chrVII:56672-57142 8.24e-01 100 chrXIII:631856-632326 6.54e-01 100 chrXV:226519-226836 2.16e-03 25_[-1(6.85e-07)]_51 chrVIII:388825-388997 1.43e-09 1_[-3(5.84e-05)]_19_[+2(4.67e-11)]_\ 1_[+3(7.70e-06)]_8 chrXII:242885-243029 3.03e-01 100 chrXI:283474-284213 5.27e-02 100 chrV:176952-177328 2.98e-10 13_[+1(2.34e-05)]_4_[-2(2.54e-12)]_\ 30 chrXI:308041-308359 1.46e-09 3_[+2(4.02e-09)]_6_[-1(7.80e-08)]_\ 38 chrIV:1156281-1156751 8.55e-01 100 chrVII:798674-799144 5.46e-01 100 chrXV:161579-162049 9.00e-01 100 chrXV:624068-624538 2.92e-01 100 chrVII:706838-707308 4.28e-03 14_[-3(4.88e-07)]_65 chrVII:677081-677551 2.42e-01 100 chrVII:1050160-1050630 3.87e-01 100 chrXII:797008-797345 3.76e-02 56_[+1(2.34e-05)]_20 chrXI:259521-259776 7.70e-03 1_[+3(2.52e-06)]_78 chrXVI:819339-819776 1.45e-13 26_[+1(1.51e-09)]_6_[-2(6.26e-12)]_\ 15 chrVII:328454-328818 4.98e-10 1_[+1(2.34e-05)]_4_[-2(2.54e-12)]_\ 42 chrV:469307-469585 5.69e-04 65_[+1(7.80e-08)]_11 chrX:531676-531776 2.66e-04 18_[+3(3.63e-08)]_61 chrXIII:761854-762086 1.19e-01 100 chrII:89561-90031 1.11e-01 100 chrXI:261339-261809 1.16e-03 65_[+3(9.76e-07)]_14 chrX:204577-204677 3.50e-08 33_[+1(9.79e-06)]_4_[-2(1.04e-08)]_\ 10 chrVIII:382965-383262 7.42e-01 100 chrIII:163509-163826 8.91e-01 100 chrIX:129780-130250 5.00e-01 100 chrXV:989084-989426 7.28e-04 40_[-1(5.31e-06)]_36 chrXII:1028202-1028672 8.59e-02 100 chrII:36252-36584 4.92e-04 34_[+1(1.65e-07)]_42 chrIX:388229-388516 9.61e-02 39_[+3(3.41e-05)]_40 chrVII:609441-610086 1.34e-03 3_[-3(4.33e-07)]_55_[+3(7.50e-05)] chrXII:97617-97803 9.50e-01 100 chrXIV:412857-413327 9.64e-01 100 chrXII:369259-370281 4.10e-01 100 chrXII:402616-403086 2.33e-01 100 chrIX:380473-380943 7.64e-01 100 chrVII:439372-439770 9.47e-01 100 chrXIII:500168-500361 7.68e-01 100 chrXIII:267926-268293 8.85e-01 100 chrIX:254326-254447 5.14e-01 100 chrII:9470-9743 3.26e-05 31_[+1(6.84e-08)]_45 chrII:680321-680752 8.89e-01 100 chrII:60996-61130 5.98e-01 100 chrXV:1006622-1007092 1.93e-02 46_[-3(1.08e-05)]_33 chrXI:430744-431214 4.49e-02 100 chrX:227787-227887 7.81e-01 100 chrIV:392583-393053 4.35e-02 17_[-2(6.71e-05)]_54 chrVII:287274-287607 7.42e-03 36_[-1(1.18e-05)]_40 chrIV:129970-130298 1.54e-01 9_[-3(7.05e-05)]_70 chrVII:807112-807324 3.07e-04 3_[+3(2.56e-05)]_8_[+3(3.63e-08)]_\ 47 chrX:606375-606475 5.59e-01 100 chrVIII:175067-175399 7.16e-01 100 chrVII:57191-57661 4.72e-02 100 chrIV:44308-44594 6.69e-02 40_[-3(5.84e-05)]_39 chrVIII:126003-126238 1.69e-01 100 chrIV:1270244-1270457 3.10e-01 100 chrXIII:222505-222975 9.79e-01 100 chrXVI:581938-582226 2.11e-12 34_[+1(3.44e-08)]_5_[-2(6.26e-12)]_\ 8 chrVII:774198-774515 1.36e-07 47_[+1(2.01e-11)]_29 chrVII:766134-766499 1.82e-01 100 chrXV:779792-781043 4.14e-03 43_[-1(2.60e-05)]_33 chrIV:601340-601603 3.27e-01 100 chrX:390947-391047 3.00e-03 8_[-1(1.22e-06)]_68 chrXI:518871-519238 4.13e-01 100 chrVIII:147764-148234 5.34e-01 100 chrII:159681-160151 1.75e-01 100 chrII:393469-393611 1.82e-02 24_[+3(2.96e-05)]_55 chrII:234954-235424 7.24e-01 100 chrXIV:392397-392690 9.55e-01 100 chrXIV:301736-302076 4.49e-01 100 chrXIV:104694-105013 1.48e-13 6_[+1(1.83e-09)]_5_[-2(1.45e-11)]_\ 36 chrV:487241-487544 5.93e-02 31_[-1(2.34e-05)]_45 chrV:396855-397325 9.07e-01 100 chrIX:300160-300443 2.00e-04 20_[-1(3.44e-08)]_56 chrXVI:820504-820974 4.89e-01 100 chrXI:163612-163979 7.12e-01 100 chrXVI:55891-56419 2.23e-02 100 chrVII:518614-519084 1.09e-02 66_[-3(6.46e-06)]_13 chrXIV:722248-722374 1.69e-03 9_[-3(2.31e-07)]_70 chrII:266258-266580 1.48e-13 13_[+1(1.83e-09)]_5_[-2(1.45e-11)]_\ 29 chrXIII:550207-550677 9.63e-01 100 chrXIII:362911-363238 3.25e-02 44_[+1(1.18e-05)]_32 chrXIII:480524-480836 1.28e-12 [+2(6.26e-12)]_5_[-1(3.44e-08)]_42 chrIV:359449-359802 3.83e-11 6_[+1(1.03e-08)]_28_[-2(4.42e-10)]_\ 13 chrXI:552090-552560 6.38e-01 100 chrIV:1359462-1359748 9.11e-01 100 chrVI:210511-210845 1.24e-08 [+2(1.55e-09)]_21_[-1(1.22e-06)]_26 chrXV:438500-438879 3.83e-11 8_[+1(1.03e-08)]_28_[-2(4.42e-10)]_\ 11 chrV:491105-491384 3.91e-02 45_[+2(9.65e-05)]_26 chrIV:1352402-1352652 2.00e-04 32_[-1(3.44e-08)]_44 chrXI:164951-165421 5.40e-01 100 chrIV:410218-410564 4.67e-15 42_[+1(2.01e-11)]_5_[-2(3.20e-11)] chrV:250183-250653 3.20e-01 100 chrXV:1053966-1054436 9.34e-01 100 chrXIII:250520-250990 1.41e-01 100 chrVI:19621-19764 2.82e-01 100 chrVII:878586-878990 7.42e-03 48_[-1(1.18e-05)]_28 chrIV:555765-556305 2.42e-01 100 chrXIV:632488-632737 3.14e-09 41_[+1(2.09e-07)]_6_[-2(2.87e-09)] chrXI:338322-338792 2.54e-03 4_[+3(5.50e-07)]_75 chrXII:932142-932430 6.51e-01 100 chrXIV:660300-660770 3.63e-01 100 chrI:139029-139334 7.54e-06 25_[+1(9.20e-07)]_13_[-3(7.70e-06)]_\ 17 chrXII:424098-424415 7.66e-01 100 chrII:332393-332683 4.18e-01 100 chrIV:1075351-1075684 1.39e-07 14_[+2(2.87e-09)]_5_[-1(9.18e-06)]_\ 28 chrXVI:282552-283022 5.71e-01 100 chrVIII:34454-35023 3.36e-01 100 chrII:256450-256920 2.93e-03 51_[-3(1.28e-05)]_28 chrVI:137388-137677 4.00e-09 13_[+2(2.87e-09)]_6_[-1(2.09e-07)]_\ 28 chrIV:117246-117520 4.79e-02 62_[+3(1.50e-05)]_17 chrVII:987356-987652 6.68e-01 100 chrIV:992690-992989 8.15e-04 47_[+1(6.85e-07)]_29 chrVII:1004099-1004368 3.24e-08 37_[+1(3.65e-06)]_4_[-2(1.12e-08)]_\ 6 chrV:492249-492582 2.71e-05 30_[-1(1.03e-08)]_46 chrXII:499128-499610 8.27e-01 100 chrXI:431973-432443 1.03e-01 100 chrX:189996-190096 3.54e-01 100 chrVII:930866-931160 7.49e-04 31_[-1(6.85e-07)]_13_[+1(8.24e-05)]_\ 8 chrIII:295326-295742 1.54e-14 4_[+1(1.83e-09)]_5_[-2(1.45e-11)]_\ 38 chrXII:731977-732267 2.14e-05 22_[+1(6.31e-09)]_54 chrXII:1019092-1019262 9.92e-01 100 chrXII:605171-605550 6.05e-01 100 chrIV:769671-770141 1.02e-03 9_[-3(4.33e-07)]_70 chrV:362765-363235 9.01e-01 100 chrV:305834-306145 3.46e-01 100 chrXVI:901587-901912 6.25e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************