Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.020237 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.057369 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.077593 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.01951 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background Finished invoke: name: bg status: 0 time: 0.011075 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 519.12394 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/seqs-shuffled Finished invoke: name: dreme status: 0 time: 59.547669 Invoking: centrimo -seqlen 340 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.228922 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.44816 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary DTGGYBYAGTGGKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.68282 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary WGYAAYSDDRAGGTCMBSGGTTCGATYCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.370108 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary DRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.357201 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.245312 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.213231 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.261147 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.283531 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.258404 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary AAGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.252995 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary CACTTKCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.237692 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.2499 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.226032 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary GTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.243864 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary ATCAKAAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.226789 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary ATCTKTTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.228903 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary GYGCCAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.21709 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background -primary SAAAAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.251542 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif DTGGYBYAGTGGKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo1 status: 0 time: 0.194398 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif WGYAAYSDDRAGGTCMBSGGTTCGATYCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo2 status: 0 time: 0.202321 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif DRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo3 status: 0 time: 0.210507 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo4 status: 0 time: 0.12662 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo5 status: 0 time: 0.181374 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo6 status: 0 time: 0.11356 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo7 status: 0 time: 0.301532 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo8 status: 0 time: 0.102396 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif AAGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo9 status: 0 time: 0.11359 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif CACTTKCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo10 status: 0 time: 0.323477 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo11 status: 0 time: 0.121725 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo12 status: 0 time: 0.123068 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif GTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo13 status: 0 time: 0.098257 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif ATCAKAAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo14 status: 0 time: 0.099954 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif ATCTKTTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo15 status: 0 time: 0.103785 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif GYGCCAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo16 status: 0 time: 0.104814 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/background --motif SAAAAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/AWRI1631--MGA2.fa Finished invoke: name: fimo17 status: 0 time: 0.094883 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MGA2/summary.tsv Finished invoke: name: summary status: 0 time: 0.404155 Done