Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.106268 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.068919 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.096299 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.040003 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.092116 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background Finished invoke: name: bg status: 0 time: 0.030536 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 889.947287 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 86.508427 Invoking: centrimo -seqlen 456 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.467102 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.503526 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary DDSSCYYWWMCMACTRVGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.394701 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary SGGRRTCGAACCSVKGAYCTY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.36619 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary TGTAACGGCTATCACATCACGCTTTCACCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.283458 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.239332 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary CMAGAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.365164 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary ACGVTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.287733 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.226513 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary ATGGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.215913 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary AGCGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.256865 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary AGCARATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.200449 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary AGAGRT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.299428 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary ATTAASAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.213391 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary CACTTKCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.221959 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background -primary GAAGAMA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.264199 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif DDSSCYYWWMCMACTRVGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo1 status: 0 time: 0.268105 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif SGGRRTCGAACCSVKGAYCTY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo2 status: 0 time: 0.48402 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif TGTAACGGCTATCACATCACGCTTTCACCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo3 status: 0 time: 0.289844 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo4 status: 0 time: 0.169396 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif CMAGAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo5 status: 0 time: 0.153072 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif ACGVTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo6 status: 0 time: 0.177558 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo7 status: 0 time: 0.166257 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif ATGGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo8 status: 0 time: 0.170829 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif AGCGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo9 status: 0 time: 0.171447 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif AGCARATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo10 status: 0 time: 0.190249 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif AGAGRT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo11 status: 0 time: 0.170974 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif ATTAASAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo12 status: 0 time: 0.189901 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif CACTTKCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo13 status: 0 time: 0.189544 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/background --motif GAAGAMA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/AWRI1631--MCM1.fa Finished invoke: name: fimo14 status: 0 time: 0.174052 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--MCM1/summary.tsv Finished invoke: name: summary status: 0 time: 0.255216 Done