Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.013255 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.056693 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.071159 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.012671 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.063329 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background Finished invoke: name: bg status: 0 time: 0.00984 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 933.686305 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 73.054128 Invoking: centrimo -seqlen 356 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.209025 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.461923 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary SSCYYWWMCMACTRVGCCAHV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.388983 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary GRRTCGAACCSVKGAYCTYHYSRTTRMWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.323301 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary TWACAYCCRTACATY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.33994 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary GCCTTAMC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.207092 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary MAGAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.301535 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary GMGCTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.220719 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary CTCTMCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.205441 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary AGTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.209147 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary CAASGATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.196535 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary CATYACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.216814 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary GRTCTCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.190753 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.233589 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary AAACCSAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.200186 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background -primary CGTGYTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.188342 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif SSCYYWWMCMACTRVGCCAHV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo1 status: 0 time: 0.200995 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif GRRTCGAACCSVKGAYCTYHYSRTTRMWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo2 status: 0 time: 0.207132 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif TWACAYCCRTACATY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo3 status: 0 time: 0.197719 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif GCCTTAMC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo4 status: 0 time: 0.10647 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif MAGAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo5 status: 0 time: 0.090253 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif GMGCTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo6 status: 0 time: 0.105575 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif CTCTMCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo7 status: 0 time: 0.105559 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif AGTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo8 status: 0 time: 0.103639 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif CAASGATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo9 status: 0 time: 0.103081 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif CATYACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo10 status: 0 time: 0.104054 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif GRTCTCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo11 status: 0 time: 0.104841 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo12 status: 0 time: 0.104705 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif AAACCSAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo13 status: 0 time: 0.103526 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/background --motif CGTGYTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/AWRI1631--AFT1.fa Finished invoke: name: fimo14 status: 0 time: 0.104373 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/AWRI1631--AFT1/summary.tsv Finished invoke: name: summary status: 0 time: 0.160782 Done