******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= intersect_memeout/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:7-1377 1.0000 100 chrI:81890-82271 1.0000 100 chrI:138854-139395 1.0000 100 chrI:141721-143705 1.0000 100 chrI:166006-166809 1.0000 100 chrI:180903-181517 1.0000 100 chrI:182327-182810 1.0000 100 chrI:229231-230193 1.0000 100 chrII:6044-7131 1.0000 100 chrII:9296-9934 1.0000 100 chrII:36134-36569 1.0000 100 chrII:44961-45350 1.0000 100 chrII:60086-61340 1.0000 100 chrII:87964-88555 1.0000 100 chrII:88971-89998 1.0000 100 chrII:165058-165692 1.0000 100 chrII:167650-169698 1.0000 100 chrII:181315-181677 1.0000 100 chrII:197136-197868 1.0000 100 chrII:226824-227683 1.0000 100 chrII:254777-255790 1.0000 100 chrII:266132-266707 1.0000 100 chrII:301164-301584 1.0000 100 chrII:326581-327610 1.0000 100 chrII:332215-333446 1.0000 100 chrII:347372-348139 1.0000 100 chrII:350465-351151 1.0000 100 chrII:405585-406309 1.0000 100 chrII:415477-415941 1.0000 100 chrII:476828-477786 1.0000 100 chrII:478964-479461 1.0000 100 chrII:556081-558470 1.0000 100 chrII:592351-593457 1.0000 100 chrII:604090-607612 1.0000 100 chrII:644955-645492 1.0000 100 chrII:680934-682212 1.0000 100 chrIII:2-1645 1.0000 100 chrIII:11069-11549 1.0000 100 chrIII:13981-16629 1.0000 100 chrIII:28867-31938 1.0000 100 chrIII:81980-82788 1.0000 100 chrIII:123303-123833 1.0000 100 chrIII:127507-127924 1.0000 100 chrIII:142173-143114 1.0000 100 chrIII:161727-163908 1.0000 100 chrIII:168067-168632 1.0000 100 chrIII:177032-179277 1.0000 100 chrIII:227622-228215 1.0000 100 chrIII:292287-293093 1.0000 100 chrIII:293644-294419 1.0000 100 chrIII:294590-295934 1.0000 100 chrIII:316218-316618 1.0000 100 chrIV:28-325 1.0000 100 chrIV:83230-83805 1.0000 100 chrIV:116862-118232 1.0000 100 chrIV:129455-131003 1.0000 100 chrIV:217027-218081 1.0000 100 chrIV:221038-222374 1.0000 100 chrIV:229449-230688 1.0000 100 chrIV:307973-309778 1.0000 100 chrIV:321687-323602 1.0000 100 chrIV:340181-341628 1.0000 100 chrIV:355120-356933 1.0000 100 chrIV:358108-358466 1.0000 100 chrIV:359312-359898 1.0000 100 chrIV:410108-410715 1.0000 100 chrIV:411240-411652 1.0000 100 chrIV:433979-435095 1.0000 100 chrIV:437480-438107 1.0000 100 chrIV:488415-489138 1.0000 100 chrIV:490444-491898 1.0000 100 chrIV:519495-520297 1.0000 100 chrIV:520458-521300 1.0000 100 chrIV:525062-525377 1.0000 100 chrIV:540954-542089 1.0000 100 chrIV:568536-569220 1.0000 100 chrIV:579010-581059 1.0000 100 chrIV:619636-620302 1.0000 100 chrIV:644989-645393 1.0000 100 chrIV:667770-668285 1.0000 100 chrIV:802120-803048 1.0000 100 chrIV:835786-836307 1.0000 100 chrIV:884092-884669 1.0000 100 chrIV:915821-916271 1.0000 100 chrIV:946138-946617 1.0000 100 chrIV:980749-981315 1.0000 100 chrIV:992549-993090 1.0000 100 chrIV:1013063-1013930 1.0000 100 chrIV:1016886-1017523 1.0000 100 chrIV:1062719-1063147 1.0000 100 chrIV:1075227-1075836 1.0000 100 chrIV:1094931-1095781 1.0000 100 chrIV:1150216-1151582 1.0000 100 chrIV:1175518-1176179 1.0000 100 chrIV:1201314-1202137 1.0000 100 chrIV:1236814-1238479 1.0000 100 chrIV:1256867-1257331 1.0000 100 chrIV:1300272-1301346 1.0000 100 chrIV:1304948-1306341 1.0000 100 chrIV:1352317-1352772 1.0000 100 chrIV:1355691-1356065 1.0000 100 chrIV:1359216-1360522 1.0000 100 chrIV:1401222-1401921 1.0000 100 chrIV:1402411-1403478 1.0000 100 chrIV:1449791-1451331 1.0000 100 chrIV:1461478-1462177 1.0000 100 chrIV:1488907-1489946 1.0000 100 chrIV:1524033-1525649 1.0000 100 chrIX:2-205 1.0000 100 chrIX:67479-69909 1.0000 100 chrIX:99640-100081 1.0000 100 chrIX:174807-175320 1.0000 100 chrIX:182509-183734 1.0000 100 chrIX:197300-198088 1.0000 100 chrIX:210497-211288 1.0000 100 chrIX:248640-249363 1.0000 100 chrIX:254235-254536 1.0000 100 chrIX:255021-258071 1.0000 100 chrIX:299998-301210 1.0000 100 chrIX:316112-317421 1.0000 100 chrIX:324007-324623 1.0000 100 chrIX:325492-326288 1.0000 100 chrIX:370102-370717 1.0000 100 chrIX:438531-439886 1.0000 100 chrM:58218-58901 1.0000 100 chrM:60479-60946 1.0000 100 chrM:61105-61504 1.0000 100 chrV:6137-6995 1.0000 100 chrV:51933-52881 1.0000 100 chrV:53473-54282 1.0000 100 chrV:61009-62222 1.0000 100 chrV:85146-85690 1.0000 100 chrV:85943-86947 1.0000 100 chrV:99653-100375 1.0000 100 chrV:110067-111375 1.0000 100 chrV:117558-118465 1.0000 100 chrV:130775-131425 1.0000 100 chrV:135141-135722 1.0000 100 chrV:138286-140884 1.0000 100 chrV:176808-177400 1.0000 100 chrV:207021-207730 1.0000 100 chrV:250089-250795 1.0000 100 chrV:269089-270782 1.0000 100 chrV:288037-288754 1.0000 100 chrV:301566-302459 1.0000 100 chrV:304688-306716 1.0000 100 chrV:311864-312458 1.0000 100 chrV:321766-323260 1.0000 100 chrV:354649-355680 1.0000 100 chrV:361869-362541 1.0000 100 chrV:396158-397314 1.0000 100 chrV:406068-409209 1.0000 100 chrV:423104-424049 1.0000 100 chrV:430996-431625 1.0000 100 chrV:433689-434786 1.0000 100 chrV:434945-436045 1.0000 100 chrV:438151-438984 1.0000 100 chrV:441570-442724 1.0000 100 chrV:443034-443544 1.0000 100 chrV:469237-469772 1.0000 100 chrV:487075-487634 1.0000 100 chrV:492117-492591 1.0000 100 chrV:550992-551743 1.0000 100 chrVI:4473-5117 1.0000 100 chrVI:63941-65433 1.0000 100 chrVI:82406-84528 1.0000 100 chrVI:95484-95825 1.0000 100 chrVI:100871-101633 1.0000 100 chrVI:137094-137908 1.0000 100 chrVI:157676-158305 1.0000 100 chrVI:161727-162480 1.0000 100 chrVI:167253-167960 1.0000 100 chrVI:180611-181228 1.0000 100 chrVI:191310-191880 1.0000 100 chrVI:204752-205563 1.0000 100 chrVI:210409-210900 1.0000 100 chrVI:221506-222086 1.0000 100 chrVI:223763-224160 1.0000 100 chrVI:226524-226961 1.0000 100 chrVI:268370-270159 1.0000 100 chrVII:13-1869 1.0000 100 chrVII:10165-10664 1.0000 100 chrVII:73648-74420 1.0000 100 chrVII:110380-110971 1.0000 100 chrVII:115212-116056 1.0000 100 chrVII:122056-122737 1.0000 100 chrVII:147397-149544 1.0000 100 chrVII:185391-186070 1.0000 100 chrVII:205287-205809 1.0000 100 chrVII:228493-228809 1.0000 100 chrVII:253918-254732 1.0000 100 chrVII:277011-277398 1.0000 100 chrVII:286912-288132 1.0000 100 chrVII:310400-312693 1.0000 100 chrVII:319565-320296 1.0000 100 chrVII:327827-329036 1.0000 100 chrVII:345856-346572 1.0000 100 chrVII:364892-366741 1.0000 100 chrVII:400977-401798 1.0000 100 chrVII:405280-405779 1.0000 100 chrVII:412106-412624 1.0000 100 chrVII:422911-423513 1.0000 100 chrVII:438562-439884 1.0000 100 chrVII:440293-442049 1.0000 100 chrVII:479132-482989 1.0000 100 chrVII:533564-535239 1.0000 100 chrVII:541553-542202 1.0000 100 chrVII:544301-546175 1.0000 100 chrVII:555187-557569 1.0000 100 chrVII:561322-561984 1.0000 100 chrVII:648835-649493 1.0000 100 chrVII:661328-661963 1.0000 100 chrVII:700108-701308 1.0000 100 chrVII:706894-707351 1.0000 100 chrVII:725977-727453 1.0000 100 chrVII:730916-731440 1.0000 100 chrVII:736177-736698 1.0000 100 chrVII:738747-739340 1.0000 100 chrVII:773970-775030 1.0000 100 chrVII:778982-779891 1.0000 100 chrVII:788298-788800 1.0000 100 chrVII:793943-794699 1.0000 100 chrVII:823237-823707 1.0000 100 chrVII:828434-829048 1.0000 100 chrVII:844909-845930 1.0000 100 chrVII:856763-856951 1.0000 100 chrVII:857239-857650 1.0000 100 chrVII:876095-876728 1.0000 100 chrVII:878319-879336 1.0000 100 chrVII:882032-883982 1.0000 100 chrVII:919843-920245 1.0000 100 chrVII:930120-931588 1.0000 100 chrVII:1003986-1004430 1.0000 100 chrVIII:34445-35582 1.0000 100 chrVIII:35758-36396 1.0000 100 chrVIII:62461-63080 1.0000 100 chrVIII:74916-75929 1.0000 100 chrVIII:85022-85641 1.0000 100 chrVIII:103869-104759 1.0000 100 chrVIII:115332-116543 1.0000 100 chrVIII:125914-127823 1.0000 100 chrVIII:132804-134742 1.0000 100 chrVIII:145968-146467 1.0000 100 chrVIII:147651-149334 1.0000 100 chrVIII:237670-238213 1.0000 100 chrVIII:296890-297281 1.0000 100 chrVIII:358239-358908 1.0000 100 chrVIII:381442-383509 1.0000 100 chrVIII:388615-389263 1.0000 100 chrVIII:410948-411893 1.0000 100 chrVIII:451595-453016 1.0000 100 chrVIII:466739-467221 1.0000 100 chrVIII:475266-476061 1.0000 100 chrVIII:505815-506518 1.0000 100 chrVIII:555854-557191 1.0000 100 chrVIII:562279-562580 1.0000 100 chrX:58735-59582 1.0000 100 chrX:73001-77024 1.0000 100 chrX:90052-90453 1.0000 100 chrX:115478-116230 1.0000 100 chrX:121262-122386 1.0000 100 chrX:139112-141515 1.0000 100 chrX:156295-157963 1.0000 100 chrX:197124-197670 1.0000 100 chrX:204257-205011 1.0000 100 chrX:227813-228721 1.0000 100 chrX:233707-234664 1.0000 100 chrX:332938-333449 1.0000 100 chrX:353499-354832 1.0000 100 chrX:355086-355735 1.0000 100 chrX:374196-374835 1.0000 100 chrX:377688-378576 1.0000 100 chrX:390844-391308 1.0000 100 chrX:396550-397094 1.0000 100 chrX:414721-415382 1.0000 100 chrX:415726-416720 1.0000 100 chrX:422648-423458 1.0000 100 chrX:424330-424744 1.0000 100 chrX:517609-518177 1.0000 100 chrX:523744-524313 1.0000 100 chrX:531454-532220 1.0000 100 chrX:538316-539141 1.0000 100 chrX:540446-541772 1.0000 100 chrX:542743-543739 1.0000 100 chrX:607815-609089 1.0000 100 chrX:617742-618182 1.0000 100 chrX:651188-651668 1.0000 100 chrX:651936-652925 1.0000 100 chrX:663636-664204 1.0000 100 chrX:702731-703649 1.0000 100 chrX:745260-745743 1.0000 100 chrXI:1-276 1.0000 100 chrXI:25478-26570 1.0000 100 chrXI:46546-47192 1.0000 100 chrXI:74440-74955 1.0000 100 chrXI:83951-84455 1.0000 100 chrXI:108507-109108 1.0000 100 chrXI:109567-110472 1.0000 100 chrXI:140730-142495 1.0000 100 chrXI:158193-159627 1.0000 100 chrXI:162003-162785 1.0000 100 chrXI:202815-203326 1.0000 100 chrXI:219412-220129 1.0000 100 chrXI:302529-303703 1.0000 100 chrXI:308016-308427 1.0000 100 chrXI:313136-314018 1.0000 100 chrXI:379482-380060 1.0000 100 chrXI:430791-431697 1.0000 100 chrXI:458323-459116 1.0000 100 chrXI:490216-491340 1.0000 100 chrXI:513196-513932 1.0000 100 chrXI:551239-551768 1.0000 100 chrXI:578758-579316 1.0000 100 chrXI:617676-619232 1.0000 100 chrXI:665355-666797 1.0000 100 chrXII:6-230 1.0000 100 chrXII:5471-5921 1.0000 100 chrXII:11017-12036 1.0000 100 chrXII:48599-49112 1.0000 100 chrXII:84167-84647 1.0000 100 chrXII:91494-92871 1.0000 100 chrXII:167712-168542 1.0000 100 chrXII:199089-199699 1.0000 100 chrXII:202489-203048 1.0000 100 chrXII:209926-210558 1.0000 100 chrXII:214646-215224 1.0000 100 chrXII:232089-234251 1.0000 100 chrXII:241529-242786 1.0000 100 chrXII:262712-263936 1.0000 100 chrXII:282162-283063 1.0000 100 chrXII:348194-348885 1.0000 100 chrXII:365863-366598 1.0000 100 chrXII:369202-370234 1.0000 100 chrXII:374187-374687 1.0000 100 chrXII:403966-404650 1.0000 100 chrXII:426906-427506 1.0000 100 chrXII:448480-449117 1.0000 100 chrXII:489288-489554 1.0000 100 chrXII:498428-499900 1.0000 100 chrXII:522130-522999 1.0000 100 chrXII:592352-593227 1.0000 100 chrXII:605131-605687 1.0000 100 chrXII:628126-629109 1.0000 100 chrXII:637164-640318 1.0000 100 chrXII:650368-651273 1.0000 100 chrXII:656679-657984 1.0000 100 chrXII:673287-674521 1.0000 100 chrXII:687613-688224 1.0000 100 chrXII:712247-713597 1.0000 100 chrXII:729972-730659 1.0000 100 chrXII:731825-732266 1.0000 100 chrXII:734699-735245 1.0000 100 chrXII:780671-781903 1.0000 100 chrXII:784126-784803 1.0000 100 chrXII:793718-797429 1.0000 100 chrXII:805349-806199 1.0000 100 chrXII:806420-807317 1.0000 100 chrXII:817715-820540 1.0000 100 chrXII:837656-839025 1.0000 100 chrXII:855668-857980 1.0000 100 chrXII:875249-875694 1.0000 100 chrXII:897629-899609 1.0000 100 chrXII:921645-922629 1.0000 100 chrXII:932064-932525 1.0000 100 chrXII:962805-963751 1.0000 100 chrXII:975730-976309 1.0000 100 chrXII:1018867-1019399 1.0000 100 chrXII:1028125-1028595 1.0000 100 chrXII:1051594-1052916 1.0000 100 chrXII:1063975-1065357 1.0000 100 chrXIII:5313-5736 1.0000 100 chrXIII:23717-25995 1.0000 100 chrXIII:91606-92098 1.0000 100 chrXIII:122853-124720 1.0000 100 chrXIII:131133-132225 1.0000 100 chrXIII:145804-146525 1.0000 100 chrXIII:162699-164317 1.0000 100 chrXIII:168529-169119 1.0000 100 chrXIII:183702-184200 1.0000 100 chrXIII:195914-196443 1.0000 100 chrXIII:222582-224430 1.0000 100 chrXIII:225324-226967 1.0000 100 chrXIII:259005-259569 1.0000 100 chrXIII:267775-268822 1.0000 100 chrXIII:289480-291378 1.0000 100 chrXIII:296710-299566 1.0000 100 chrXIII:320931-321832 1.0000 100 chrXIII:352064-352472 1.0000 100 chrXIII:362842-363348 1.0000 100 chrXIII:372163-372773 1.0000 100 chrXIII:378846-379650 1.0000 100 chrXIII:420327-421365 1.0000 100 chrXIII:462761-463943 1.0000 100 chrXIII:480403-480925 1.0000 100 chrXIII:499053-501823 1.0000 100 chrXIII:504629-505381 1.0000 100 chrXIII:550836-553198 1.0000 100 chrXIII:572627-573495 1.0000 100 chrXIII:586345-586877 1.0000 100 chrXIII:650735-651726 1.0000 100 chrXIII:651949-652940 1.0000 100 chrXIII:731698-733542 1.0000 100 chrXIII:747717-748329 1.0000 100 chrXIII:753603-754800 1.0000 100 chrXIII:761243-763190 1.0000 100 chrXIII:807908-808609 1.0000 100 chrXIII:837670-838684 1.0000 100 chrXIII:887394-888151 1.0000 100 chrXIII:923380-924382 1.0000 100 chrXIV:6502-7142 1.0000 100 chrXIV:23876-25841 1.0000 100 chrXIV:61572-64705 1.0000 100 chrXIV:88860-90140 1.0000 100 chrXIV:96005-96658 1.0000 100 chrXIV:102408-103079 1.0000 100 chrXIV:104593-105148 1.0000 100 chrXIV:173857-174661 1.0000 100 chrXIV:229438-230911 1.0000 100 chrXIV:241352-241748 1.0000 100 chrXIV:302342-302691 1.0000 100 chrXIV:302994-303704 1.0000 100 chrXIV:330506-332557 1.0000 100 chrXIV:374626-375197 1.0000 100 chrXIV:442818-444172 1.0000 100 chrXIV:444429-444856 1.0000 100 chrXIV:493686-495612 1.0000 100 chrXIV:499009-499780 1.0000 100 chrXIV:499972-502062 1.0000 100 chrXIV:546936-547374 1.0000 100 chrXIV:560173-561191 1.0000 100 chrXIV:567837-568683 1.0000 100 chrXIV:569607-570157 1.0000 100 chrXIV:575049-575859 1.0000 100 chrXIV:585370-586535 1.0000 100 chrXIV:602115-602577 1.0000 100 chrXIV:613219-613730 1.0000 100 chrXIV:631721-632150 1.0000 100 chrXIV:632359-632896 1.0000 100 chrXIV:715516-716669 1.0000 100 chrXIV:725754-726439 1.0000 100 chrXIV:783348-784325 1.0000 100 chrXV:6-1042 1.0000 100 chrXV:33131-33785 1.0000 100 chrXV:79093-80121 1.0000 100 chrXV:92075-94888 1.0000 100 chrXV:109571-111279 1.0000 100 chrXV:113361-114121 1.0000 100 chrXV:159321-160737 1.0000 100 chrXV:161083-161661 1.0000 100 chrXV:167730-168473 1.0000 100 chrXV:216252-216681 1.0000 100 chrXV:226406-226945 1.0000 100 chrXV:227962-228612 1.0000 100 chrXV:253489-254340 1.0000 100 chrXV:274489-275018 1.0000 100 chrXV:281530-282591 1.0000 100 chrXV:287944-288437 1.0000 100 chrXV:300820-301480 1.0000 100 chrXV:339764-340677 1.0000 100 chrXV:353803-354891 1.0000 100 chrXV:438370-439070 1.0000 100 chrXV:444909-446145 1.0000 100 chrXV:464186-464687 1.0000 100 chrXV:487175-487730 1.0000 100 chrXV:505072-505515 1.0000 100 chrXV:571378-572259 1.0000 100 chrXV:594119-594914 1.0000 100 chrXV:619632-624684 1.0000 100 chrXV:663453-664356 1.0000 100 chrXV:677956-679221 1.0000 100 chrXV:709952-710534 1.0000 100 chrXV:728961-730197 1.0000 100 chrXV:779687-780898 1.0000 100 chrXV:832299-832849 1.0000 100 chrXV:842428-843284 1.0000 100 chrXV:853989-854439 1.0000 100 chrXV:866566-868427 1.0000 100 chrXV:900033-901690 1.0000 100 chrXV:968129-968410 1.0000 100 chrXV:976142-977328 1.0000 100 chrXV:978832-979130 1.0000 100 chrXV:979813-981042 1.0000 100 chrXV:1003791-1005325 1.0000 100 chrXV:1025726-1026627 1.0000 100 chrXV:1027290-1029670 1.0000 100 chrXVI:55783-56555 1.0000 100 chrXVI:76167-76724 1.0000 100 chrXVI:172741-174126 1.0000 100 chrXVI:188615-189019 1.0000 100 chrXVI:209905-210528 1.0000 100 chrXVI:280636-282778 1.0000 100 chrXVI:302590-303254 1.0000 100 chrXVI:338705-339162 1.0000 100 chrXVI:378674-379038 1.0000 100 chrXVI:404548-405781 1.0000 100 chrXVI:406204-407859 1.0000 100 chrXVI:433444-434397 1.0000 100 chrXVI:435636-436583 1.0000 100 chrXVI:515149-517033 1.0000 100 chrXVI:520155-520820 1.0000 100 chrXVI:559990-560983 1.0000 100 chrXVI:571561-573072 1.0000 100 chrXVI:581654-582469 1.0000 100 chrXVI:622125-622855 1.0000 100 chrXVI:653754-655033 1.0000 100 chrXVI:689083-690438 1.0000 100 chrXVI:699915-700677 1.0000 100 chrXVI:718451-719459 1.0000 100 chrXVI:731690-732337 1.0000 100 chrXVI:743729-744700 1.0000 100 chrXVI:768498-769513 1.0000 100 chrXVI:775656-776216 1.0000 100 chrXVI:794383-796081 1.0000 100 chrXVI:810390-810945 1.0000 100 chrXVI:818768-819958 1.0000 100 chrXVI:856461-857177 1.0000 100 chrXVI:860037-860594 1.0000 100 chrXVI:866445-866763 1.0000 100 chrXVI:880067-880570 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme intersect_memeout/seqs-centered -oc intersect_memeout/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile intersect_memeout/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 519 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 51900 N= 519 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.309 C 0.191 G 0.191 T 0.309 Background letter frequencies (from intersect_memeout/background): A 0.319 C 0.181 G 0.181 T 0.319 ******************************************************************************** ******************************************************************************** MOTIF AAYCDKRAGRTCMBSGGTTCGANYCCSVK MEME-1 width = 29 sites = 68 llr = 1417 E-value = 1.4e-300 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGANYCCSVK MEME-1 Description -------------------------------------------------------------------------------- Simplified A 78::3257252:4:12::::3a2:::13: pos.-specific C 2:3811::1:17433::::a::35a7642 probability G 1112444375::2368a:::7:2:::334 matrix T :15:231:1:73:31::aa:::45:21:4 bits 2.5 * * * 2.2 * * * 2.0 * * * 1.7 * * ** * * Relative 1.5 * * **** * * Entropy 1.2 * * ******* ** (30.1 bits) 1.0 * * * ******* **** 0.7 * * *** * ******** ***** 0.5 **** **************** ****** 0.2 ********************** ****** 0.0 ----------------------------- Multilevel AATCGGAAGGTCCGGGGTTCGATTCCCCG consensus C ATGG AATATC A CC TGGT sequence A C G A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGANYCCSVK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrIII:123303-123833 - 68 1.56e-13 TAGG GTGCGGGAGGTCCCGGGTTCGAGTCCCGG CTCGCCCCAC chrXIII:480403-480925 - 16 5.16e-13 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTC chrXI:202815-203326 + 15 5.16e-13 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrX:414721-415382 + 1 5.16e-13 . AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAA chrVII:876095-876728 + 69 5.16e-13 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACA chrVII:185391-186070 - 42 5.16e-13 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAT chrVI:226524-226961 - 4 5.16e-13 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACA chrV:135141-135722 - 52 5.16e-13 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrXVI:209905-210528 - 34 6.07e-13 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTT chrVII:541553-542202 + 58 6.07e-13 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTG chrV:487075-487634 - 35 6.07e-13 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrIV:1016886-1017523 - 61 6.07e-13 ATCACGTTCT CACCGTGGAGACCGGGGTTCGACTCCCCG CTTCGGAGTT chrII:644955-645492 + 29 6.07e-13 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTT chrXVI:880067-880570 - 36 1.14e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrXIV:602115-602577 + 54 1.14e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrXIV:569607-570157 - 44 1.14e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrIV:667770-668285 - 38 1.14e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrX:374196-374835 - 49 1.80e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrX:355086-355735 + 49 1.80e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:828434-829048 - 41 1.80e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:405280-405779 + 26 1.80e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrII:405585-406309 + 17 1.80e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrXVI:571561-573072 + 37 1.61e-11 CCAACGTTGC CATCGTTGGGCCCCCGGTTCGATTCCGGG CTTGCGCAAT chrXIII:183702-184200 - 6 1.61e-11 CCAACGTTGC CATCGTTGGGCCCCCGGTTCGATTCCGGG CTTGC chrXV:853989-854439 - 32 1.82e-11 CTTCCCTTGC AAGGAAGAGGTCATCGGTTCGATTCCGGT TGCGTCCAAT chrXII:214646-215224 - 7 1.82e-11 CTTCCCTTGC AAGGAAGAGGTCATCGGTTCGATTCCGGT TGCGTC chrXV:438370-439070 + 33 3.35e-11 TAAGCAAGGA TACCGAAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXII:875249-875694 + 14 3.35e-11 TAAGCAAGGA TACCGAAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXI:578758-579316 + 38 3.35e-11 TAAGCAAGGA TACCGAAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrIV:644989-645393 - 21 3.35e-11 TTTCGGTTTT GATCCGGACAACCCCGGTTCGAATCCGGG TAGGACCTTT chrIII:168067-168632 - 10 3.35e-11 TTTCGGTTTT GATCCGGACAACCCCGGTTCGAATCCGGG TAGGACCTT chrV:130775-131425 - 41 5.34e-11 TTTCGGTTTT GATCCGAACAACCCCGGTTCGAATCCGGG TAAGACCTAT chrXV:300820-301480 + 63 5.99e-11 GGGACAAAGC ATGCGAGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCC chrXIV:546936-547374 + 56 5.99e-11 AAGACAAAGC ATGCGAGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCGT chrVIII:388615-389263 - 13 5.99e-11 AAGACAAAGC ATGCGAGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCAT chrXIV:560173-561191 - 70 1.77e-10 GT AATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrXIV:104593-105148 + 21 1.77e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrIX:174807-175320 + 54 1.77e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCAAT chrII:266132-266707 + 45 1.77e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATT chrXIV:632359-632896 + 59 2.94e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXIV:102408-103079 + 60 2.94e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXII:975730-976309 - 22 2.94e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXI:74440-74955 + 14 2.94e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGCT chrVII:730916-731440 + 47 2.94e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrVI:137094-137908 - 44 2.94e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrX:390844-391308 - 26 3.25e-10 TCAGTCTCAT AATCTGAAGGTCGAGAGTTCGAACCTCCC CTGGAGCATA chrIV:1175518-1176179 + 67 3.25e-10 TCAGTCTCAT AATCTGAAGGTCGAGAGTTCGAACCTCCC CTGGA chrXIII:807908-808609 - 46 3.58e-10 TTTCGGTTCT GATCCGAACAACCCCAGTTCGAATCCGGG TGGGACCTTC chrXIII:372163-372773 - 36 4.35e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrVIII:85022-85641 - 25 4.35e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrV:469237-469772 + 40 4.35e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXII:374187-374687 + 5 4.78e-10 TACG AACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrV:492117-492591 - 57 4.78e-10 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGGA chrIV:619636-620302 - 59 4.78e-10 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrVI:210409-210900 - 23 6.34e-10 ACCACTACGA AATCTTGAGATCGGGCGTTCGACTCGCCC CCGGGAGATA chrIV:946138-946617 + 37 6.34e-10 ATCACTACGA AATCTTGAGATCGGGCGTTCGACTCGCCC CCGGGAGATT chrXIV:374626-375197 + 62 1.30e-09 TCGGTCAAGT CATCTGGAGGTCCTGTGTTCGATCCACAG AGTTCGCAAT chrXVI:55783-56555 - 59 2.35e-09 ATAAGATTGC AATCGAAGGGTTGCAGGTTCAATTCCTGT CCGTTTCAAT chrVII:706894-707351 - 44 9.32e-09 GCAGATTGCA AATCTGTTGGTCCTTAGTTCGATCCTGAG TGCGAGCTTT chrIV:410108-410715 + 54 1.07e-08 CTCCCTTAGC ATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAA chrXV:709952-710534 + 44 2.11e-08 CAGGGCTCAT AACCCTGATGTCCTCGGATCGAAACCGAG CGGCGCTAAT chrXII:426906-427506 + 12 2.56e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAA chrIX:324007-324623 - 47 2.56e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXIII:362842-363348 + 55 4.71e-08 ACATCGTTGT GGCCGATGAAACCCTGGTTCGATTCTAGG AGATGGCATT chrVIII:62461-63080 + 70 4.71e-08 ACATCGTTGT GGCCGATGAAACCCTGGTTCGATTCTAGG AG chrVII:110380-110971 - 8 4.71e-08 ACATCGTTGT GGCCGATGAAACCCTGGTTCGATTCTAGG AGATGGC chrV:207021-207730 + 67 4.71e-08 ACATCGTTGT GGCCGATGAAACCCTGGTTCGATTCTAGG AGATG chrVII:700108-701308 + 63 1.56e-07 AGGTCCTGAT CTCTTCGGAGGCGCGGGTTCAAACCCCGC GGGTATCAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGANYCCSVK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123303-123833 1.6e-13 67_[-1]_4 chrXIII:480403-480925 5.2e-13 15_[-1]_56 chrXI:202815-203326 5.2e-13 14_[+1]_57 chrX:414721-415382 5.2e-13 [+1]_71 chrVII:876095-876728 5.2e-13 68_[+1]_3 chrVII:185391-186070 5.2e-13 41_[-1]_30 chrVI:226524-226961 5.2e-13 3_[-1]_68 chrV:135141-135722 5.2e-13 51_[-1]_20 chrXVI:209905-210528 6.1e-13 33_[-1]_38 chrVII:541553-542202 6.1e-13 57_[+1]_14 chrV:487075-487634 6.1e-13 34_[-1]_37 chrIV:1016886-1017523 6.1e-13 60_[-1]_11 chrII:644955-645492 6.1e-13 28_[+1]_43 chrXVI:880067-880570 1.1e-12 35_[-1]_36 chrXIV:602115-602577 1.1e-12 53_[+1]_18 chrXIV:569607-570157 1.1e-12 43_[-1]_28 chrIV:667770-668285 1.1e-12 37_[-1]_34 chrX:374196-374835 1.8e-12 48_[-1]_23 chrX:355086-355735 1.8e-12 48_[+1]_23 chrVII:828434-829048 1.8e-12 40_[-1]_31 chrVII:405280-405779 1.8e-12 25_[+1]_46 chrII:405585-406309 1.8e-12 16_[+1]_55 chrXVI:571561-573072 1.6e-11 36_[+1]_35 chrXIII:183702-184200 1.6e-11 5_[-1]_66 chrXV:853989-854439 1.8e-11 31_[-1]_40 chrXII:214646-215224 1.8e-11 6_[-1]_65 chrXV:438370-439070 3.3e-11 32_[+1]_39 chrXII:875249-875694 3.3e-11 13_[+1]_58 chrXI:578758-579316 3.3e-11 37_[+1]_34 chrIV:644989-645393 3.3e-11 20_[-1]_51 chrIII:168067-168632 3.3e-11 9_[-1]_62 chrV:130775-131425 5.3e-11 40_[-1]_31 chrXV:300820-301480 6e-11 62_[+1]_9 chrXIV:546936-547374 6e-11 55_[+1]_16 chrVIII:388615-389263 6e-11 12_[-1]_59 chrXIV:560173-561191 1.8e-10 69_[-1]_2 chrXIV:104593-105148 1.8e-10 20_[+1]_51 chrIX:174807-175320 1.8e-10 53_[+1]_18 chrII:266132-266707 1.8e-10 44_[+1]_27 chrXIV:632359-632896 2.9e-10 58_[+1]_13 chrXIV:102408-103079 2.9e-10 59_[+1]_12 chrXII:975730-976309 2.9e-10 21_[-1]_50 chrXI:74440-74955 2.9e-10 13_[+1]_58 chrVII:730916-731440 2.9e-10 46_[+1]_25 chrVI:137094-137908 2.9e-10 43_[-1]_28 chrX:390844-391308 3.2e-10 25_[-1]_46 chrIV:1175518-1176179 3.2e-10 66_[+1]_5 chrXIII:807908-808609 3.6e-10 45_[-1]_26 chrXIII:372163-372773 4.3e-10 35_[-1]_36 chrVIII:85022-85641 4.3e-10 24_[-1]_47 chrV:469237-469772 4.3e-10 39_[+1]_32 chrXII:374187-374687 4.8e-10 4_[+1]_67 chrV:492117-492591 4.8e-10 56_[-1]_15 chrIV:619636-620302 4.8e-10 58_[-1]_13 chrVI:210409-210900 6.3e-10 22_[-1]_49 chrIV:946138-946617 6.3e-10 36_[+1]_35 chrXIV:374626-375197 1.3e-09 61_[+1]_10 chrXVI:55783-56555 2.4e-09 58_[-1]_13 chrVII:706894-707351 9.3e-09 43_[-1]_28 chrIV:410108-410715 1.1e-08 53_[+1]_18 chrXV:709952-710534 2.1e-08 43_[+1]_28 chrXII:426906-427506 2.6e-08 11_[+1]_60 chrIX:324007-324623 2.6e-08 46_[-1]_25 chrXIII:362842-363348 4.7e-08 54_[+1]_17 chrVIII:62461-63080 4.7e-08 69_[+1]_2 chrVII:110380-110971 4.7e-08 7_[-1]_64 chrV:207021-207730 4.7e-08 66_[+1]_5 chrVII:700108-701308 1.6e-07 62_[+1]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGANYCCSVK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAYCDKRAGRTCMBSGGTTCGANYCCSVK width=29 seqs=68 chrIII:123303-123833 ( 68) GTGCGGGAGGTCCCGGGTTCGAGTCCCGG 1 chrXIII:480403-480925 ( 16) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrXI:202815-203326 ( 15) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrX:414721-415382 ( 1) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrVII:876095-876728 ( 69) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrVII:185391-186070 ( 42) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrVI:226524-226961 ( 4) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrV:135141-135722 ( 52) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrXVI:209905-210528 ( 34) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrVII:541553-542202 ( 58) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrV:487075-487634 ( 35) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIV:1016886-1017523 ( 61) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrII:644955-645492 ( 29) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrXVI:880067-880570 ( 36) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrXIV:602115-602577 ( 54) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrXIV:569607-570157 ( 44) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrIV:667770-668285 ( 38) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrX:374196-374835 ( 49) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrX:355086-355735 ( 49) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrVII:828434-829048 ( 41) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrVII:405280-405779 ( 26) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrII:405585-406309 ( 17) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrXVI:571561-573072 ( 37) CATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrXIII:183702-184200 ( 6) CATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrXV:853989-854439 ( 32) AAGGAAGAGGTCATCGGTTCGATTCCGGT 1 chrXII:214646-215224 ( 7) AAGGAAGAGGTCATCGGTTCGATTCCGGT 1 chrXV:438370-439070 ( 33) TACCGAAATGTCAGGGGTTCGAGCCCCCT 1 chrXII:875249-875694 ( 14) TACCGAAATGTCAGGGGTTCGAGCCCCCT 1 chrXI:578758-579316 ( 38) TACCGAAATGTCAGGGGTTCGAGCCCCCT 1 chrIV:644989-645393 ( 21) GATCCGGACAACCCCGGTTCGAATCCGGG 1 chrIII:168067-168632 ( 10) GATCCGGACAACCCCGGTTCGAATCCGGG 1 chrV:130775-131425 ( 41) GATCCGAACAACCCCGGTTCGAATCCGGG 1 chrXV:300820-301480 ( 63) ATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrXIV:546936-547374 ( 56) ATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrVIII:388615-389263 ( 13) ATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrXIV:560173-561191 ( 70) AATGTGGAGATCATCGGTTCAAATCCGAT 1 chrXIV:104593-105148 ( 21) AATGTGGAGATCATCGGTTCAAATCCGAT 1 chrIX:174807-175320 ( 54) AATGTGGAGATCATCGGTTCAAATCCGAT 1 chrII:266132-266707 ( 45) AATGTGGAGATCATCGGTTCAAATCCGAT 1 chrXIV:632359-632896 ( 59) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrXIV:102408-103079 ( 60) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrXII:975730-976309 ( 22) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrXI:74440-74955 ( 14) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrVII:730916-731440 ( 47) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrVI:137094-137908 ( 44) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrX:390844-391308 ( 26) AATCTGAAGGTCGAGAGTTCGAACCTCCC 1 chrIV:1175518-1176179 ( 67) AATCTGAAGGTCGAGAGTTCGAACCTCCC 1 chrXIII:807908-808609 ( 46) GATCCGAACAACCCCAGTTCGAATCCGGG 1 chrXIII:372163-372773 ( 36) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrVIII:85022-85641 ( 25) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrV:469237-469772 ( 40) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrXII:374187-374687 ( 5) AACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrV:492117-492591 ( 57) AACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrIV:619636-620302 ( 59) AACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrVI:210409-210900 ( 23) AATCTTGAGATCGGGCGTTCGACTCGCCC 1 chrIV:946138-946617 ( 37) AATCTTGAGATCGGGCGTTCGACTCGCCC 1 chrXIV:374626-375197 ( 62) CATCTGGAGGTCCTGTGTTCGATCCACAG 1 chrXVI:55783-56555 ( 59) AATCGAAGGGTTGCAGGTTCAATTCCTGT 1 chrVII:706894-707351 ( 44) AATCTGTTGGTCCTTAGTTCGATCCTGAG 1 chrIV:410108-410715 ( 54) ATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrXV:709952-710534 ( 44) AACCCTGATGTCCTCGGATCGAAACCGAG 1 chrXII:426906-427506 ( 12) CGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrIX:324007-324623 ( 47) CGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrXIII:362842-363348 ( 55) GGCCGATGAAACCCTGGTTCGATTCTAGG 1 chrVIII:62461-63080 ( 70) GGCCGATGAAACCCTGGTTCGATTCTAGG 1 chrVII:110380-110971 ( 8) GGCCGATGAAACCCTGGTTCGATTCTAGG 1 chrV:207021-207730 ( 67) GGCCGATGAAACCCTGGTTCGATTCTAGG 1 chrVII:700108-701308 ( 63) CTCTTCGGAGGCGCGGGTTCAAACCCCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGANYCCSVK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 37368 bayes= 11.1185 E= 1.4e-300 105 -16 -45 -285 129 -203 -103 -186 -1273 91 -30 69 -1273 214 8 -444 -12 -45 108 -74 -63 -81 129 -35 56 -262 114 -163 114 -262 47 -444 -86 -81 187 -244 56 -1273 155 -1273 -53 -130 -362 111 -1273 203 -1273 -27 20 129 -3 -444 -344 70 91 8 -244 77 163 -212 -74 -262 208 -444 -1273 -1273 247 -1273 -444 -1273 -1273 163 -1273 -1273 -1273 165 -1273 247 -1273 -1273 -12 -1273 197 -1273 165 -1273 -1273 -1273 -86 55 19 14 -444 143 -1273 65 -1273 247 -1273 -1273 -444 200 -262 -44 -244 163 84 -244 -5 103 84 -1273 -444 -16 129 26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGANYCCSVK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 68 E= 1.4e-300 0.661765 0.161765 0.132353 0.044118 0.779412 0.044118 0.088235 0.088235 0.000000 0.338235 0.147059 0.514706 0.000000 0.794118 0.191176 0.014706 0.294118 0.132353 0.382353 0.191176 0.205882 0.102941 0.441176 0.250000 0.470588 0.029412 0.397059 0.102941 0.705882 0.029412 0.250000 0.014706 0.176471 0.102941 0.661765 0.058824 0.470588 0.000000 0.529412 0.000000 0.220588 0.073529 0.014706 0.691176 0.000000 0.735294 0.000000 0.264706 0.367647 0.441176 0.176471 0.014706 0.029412 0.294118 0.338235 0.338235 0.058824 0.308824 0.558824 0.073529 0.191176 0.029412 0.764706 0.014706 0.000000 0.000000 1.000000 0.000000 0.014706 0.000000 0.000000 0.985294 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.294118 0.000000 0.705882 0.000000 1.000000 0.000000 0.000000 0.000000 0.176471 0.264706 0.205882 0.352941 0.014706 0.485294 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.014706 0.720588 0.029412 0.235294 0.058824 0.558824 0.323529 0.058824 0.308824 0.367647 0.323529 0.000000 0.014706 0.161765 0.441176 0.382353 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGANYCCSVK MEME-1 regular expression -------------------------------------------------------------------------------- AA[TC]C[GA][GTA][AG][AG]G[GA][TA][CT][CA][GTC][GC]GGTTC[GA]A[TCG][TC]C[CT][CG][CGA][GT] -------------------------------------------------------------------------------- Time 732.45 secs. ******************************************************************************** ******************************************************************************** MOTIF YKTGGCCSAGTBGGTWAAGSSVYVBRCTT MEME-2 width = 29 sites = 60 llr = 1174 E-value = 1.3e-227 ******************************************************************************** -------------------------------------------------------------------------------- Motif YKTGGCCSAGTBGGTWAAGSSVYVBRCTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 12:2:::2a1:::::575:::422132:2 pos.-specific C 5::::964::12::1::2:5534431532 probability G 23:8a:23:9:3a71:32a54212442:2 matrix T 35a::222::94:375:2::124131175 bits 2.5 * 2.2 * * * 2.0 * * * * 1.7 **** ** * * Relative 1.5 **** ** * ** Entropy 1.2 **** *** ** *** (28.2 bits) 1.0 ***** *** ** * *** * 0.7 ***** *** ** * *** * 0.5 * ***** ********* *** * ** 0.2 ********************* ******* 0.0 ----------------------------- Multilevel CTTGGCCCAGTTGGTTAAGCCATCGGCTT consensus TG TG G T AG GGCCACAAC sequence A C G GT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YKTGGCCSAGTBGGTWAAGSSVYVBRCTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXVI:880067-880570 - 68 2.23e-13 GTCT CTTGGCCCAGTTGGTTAAGGCACCGTGCT AATAACGCGG chrXIV:602115-602577 + 22 2.23e-13 ACAATGGTCT CTTGGCCCAGTTGGTTAAGGCACCGTGCT AATAACGCGG chrV:550992-551743 - 8 2.23e-13 TTACAGGTCT CTTGGCCCAGTTGGTTAAGGCACCGTGCT AATAACG chrV:443034-443544 - 4 2.23e-13 AATTTGGTCT CTTGGCCCAGTTGGTTAAGGCACCGTGCT AAT chrIV:667770-668285 - 70 2.23e-13 CT CTTGGCCCAGTTGGTTAAGGCACCGTGCT AATAACGCGG chrII:197136-197868 + 48 2.23e-13 ATCAAGGTCT CTTGGCCCAGTTGGTTAAGGCACCGTGCT AATAACGCGG chrXVI:810390-810945 + 64 6.25e-12 TTTGCGACTC CATGGCCAAGTTGGTTAAGGCGTGCGACT GTTAATCG chrXV:487175-487730 + 42 6.25e-12 AGTTAGACTC CATGGCCAAGTTGGTTAAGGCGTGCGACT GTTAATCGCA chrXIV:632359-632896 + 27 6.25e-12 AAAGTGACTC CATGGCCAAGTTGGTTAAGGCGTGCGACT GTTAATCGCA chrXIV:102408-103079 + 28 6.25e-12 TATAAGACTC CATGGCCAAGTTGGTTAAGGCGTGCGACT GTTAATCGCA chrXII:975730-976309 - 54 6.25e-12 TAAAAGACTC CATGGCCAAGTTGGTTAAGGCGTGCGACT GTTAATCGCA chrVII:730916-731440 + 15 6.25e-12 AAAAAGACTC CATGGCCAAGTTGGTTAAGGCGTGCGACT GTTAATCGCA chrIII:127507-127924 + 56 6.25e-12 AAAATGACTC CATGGCCAAGTTGGTTAAGGCGTGCGACT GTTAATCGCA chrIV:359312-359898 + 28 2.66e-11 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCGTTCGGCTT TTAAGCGCAT chrX:617742-618182 + 13 4.54e-11 ACAATGGGAG TTTGGCCGAGTGGTTTAAGGCGTCAGATT TAGGTGGATT chrXIII:372163-372773 - 68 5.16e-11 GTTT CGTGGTCTAGTCGGTTATGGCATCTGCTT AACACGCAGA chrXII:687613-688224 - 31 5.16e-11 TAATAGGTTT CGTGGTCTAGTCGGTTATGGCATCTGCTT AACACGCAGA chrXI:308016-308427 - 13 5.16e-11 TAAGTGGTTT CGTGGTCTAGTCGGTTATGGCATCTGCTT AACACGCAGA chrVIII:85022-85641 - 57 5.16e-11 AATTTGGTTT CGTGGTCTAGTCGGTTATGGCATCTGCTT AACACGCAGA chrVII:823237-823707 + 66 5.16e-11 AGAGTGGTTT CGTGGTCTAGTCGGTTATGGCATCTGCTT AACACG chrVII:412106-412624 - 20 5.16e-11 AAACTGGTTT CGTGGTCTAGTCGGTTATGGCATCTGCTT AACACGCAGA chrV:469237-469772 + 8 5.16e-11 TTGGTTT CGTGGTCTAGTCGGTTATGGCATCTGCTT AACACGCAGA chrXV:853989-854439 - 63 6.66e-11 ATCAGGGCA CATGGCGCAGTTGGTAGCGCGCTTCCCTT GCAAGGAAGA chrXII:214646-215224 - 38 6.66e-11 TTTTAGGGCA CATGGCGCAGTTGGTAGCGCGCTTCCCTT GCAAGGAAGA chrX:58735-59582 - 31 6.66e-11 TAGAAGCTTC TATGGCCAAGTTGGTAAGGCGCCACACTA GTAATGTGGA chrIX:174807-175320 + 23 6.66e-11 TACGAGCTTC TATGGCCAAGTTGGTAAGGCGCCACACTA GTAATGTGGA chrII:266132-266707 + 14 6.66e-11 AAACTGCTTC TATGGCCAAGTTGGTAAGGCGCCACACTA GTAATGTGGA chrXIV:374626-375197 + 13 1.23e-10 AATAAGCGGA CTTAGCTCAGTTGGGAGAGCGCCAGACTG AAGAAAAACT chrVII:857239-857650 - 64 1.75e-10 AGTGGTTG TTTGGCCGAGCGGTCTAAGGCGCCTGATT CAAGAAATAT chrVII:205287-205809 + 29 1.75e-10 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGCGCCTGATT CAAGCAATAT chrIV:1461478-1462177 - 19 1.75e-10 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGCGCCTGATT CAAGAAAAAA chrVI:191310-191880 - 36 3.42e-10 ATTCTGTCCC AGTGGCCGAGTGGTTAAGGCGATGCCCTG CTATTTCCTC chrXIII:352064-352472 + 68 3.81e-10 TATAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACTG AAGA chrVIII:358239-358908 - 13 3.81e-10 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACTG AAGAAAAAAC chrVIII:237670-238213 - 15 3.81e-10 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACTG AAGAAAAAAC chrVI:157676-158305 - 34 3.81e-10 TAGAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACTG AAGAAAAAAC chrIV:1304948-1306341 + 41 3.81e-10 ATTAAGGCAA CTTGGCCGAGTGGTTAAGGCGAAAGATTA GAAATCTTTT chrIV:980749-981315 - 41 3.81e-10 ATTGAGGCAA CTTGGCCGAGTGGTTAAGGCGAAAGATTA GAAATCTTTT chrIV:437480-438107 + 34 3.81e-10 AGTAAGGCAA CTTGGCCGAGTGGTTAAGGCGAAAGATTA GAAATCTTTT chrI:182327-182810 - 52 3.81e-10 ATTTTGGCAA CTTGGCCGAGTGGTTAAGGCGAAAGATTA GAAATCTTTT chrXI:83951-84455 + 61 1.17e-09 TGTATGGAGG GTTGGCCGAGTGGTCTAAGGCGGCAGACT TAAGATCTGT chrII:9296-9934 + 24 1.17e-09 TTCGTGGAGG GTTGGCCGAGTGGTCTAAGGCGGCAGACT TAAGATCTGT chrX:197124-197670 - 6 2.05e-09 TATTAGGGCG TGTGGCGTAGTCGGTAGCGCGCTCCCTTA GCATG chrIV:410108-410715 + 23 2.05e-09 ATATTGGGCG TGTGGCGTAGTCGGTAGCGCGCTCCCTTA GCATGGGAGA chrVII:700108-701308 + 23 3.48e-09 GAATTGGTAC TCTGGCCGAGTGGTCTAAGGCGTCAGGTC GAGGTCCTGA chrXII:605131-605687 - 41 4.12e-09 AAAATGCTCG TGTAGCTCAGTGGTTAGAGCTTCGTGCTT ATAGCAACAT chrIV:884092-884669 + 36 4.12e-09 AAAATGCTCG TGTAGCTCAGTGGTTAGAGCTTCGTGCTT ATAGCAACAT chrXVI:581654-582469 + 56 6.23e-09 AAAGAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACTC TTAATCATAA chrXIII:480403-480925 - 47 6.23e-09 AAGTAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACTC TTAATCATAA chrVII:876095-876728 + 38 6.23e-09 GAATAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACTC TTAATCATAA chrVI:226524-226961 - 35 6.23e-09 AAAATGCCTT GTTGGCGCAATCGGTAGCGCGTATGACTC TTAATCATAA chrIV:1352317-1352772 - 11 6.23e-09 AAATAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACTC TTAATCATAA chrIV:1150216-1151582 - 60 2.55e-08 TTTCAGTCCC AGTGGCCGAGTGGTTAAGGCGATGCCTGC TATTTCCTCA chrXI:1-276 - 53 9.97e-08 GTGGGAGTGG TATGGTTGAGTGGGGCAGGGTAACGAGTG GAGAGGTAGG chrIII:316218-316618 + 52 9.97e-08 TTGGGAGTGG TATGGTTGAGTGGGGCAGGGTAACGAGTG GGGAGGTAGG chrXVI:433444-434397 + 55 1.05e-07 CAGGTTTGAA GGTGGCCAAGATGTTGAAGGCCGGTACCG TCTGGATCAA chrX:390844-391308 - 57 1.24e-07 ATAGTGCTTC AGTAGCTCAGTAGGAAGAGCGTCAGTCTC ATAATCTGAA chrIV:1175518-1176179 + 36 1.24e-07 ACAAAGCTTC AGTAGCTCAGTAGGAAGAGCGTCAGTCTC ATAATCTGAA chrIV:1524033-1525649 - 60 1.90e-07 ATACACGGCA CTTGCCTCAGCGGTCTATACCCTGTGCCA TTTACCCATA chrIII:2-1645 + 72 1.90e-07 ATGCACGGCA CTTGCCTCAGCGGTCTATACCCTGTGCCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YKTGGCCSAGTBGGTWAAGSSVYVBRCTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:880067-880570 2.2e-13 67_[-2]_4 chrXIV:602115-602577 2.2e-13 21_[+2]_50 chrV:550992-551743 2.2e-13 7_[-2]_64 chrV:443034-443544 2.2e-13 3_[-2]_68 chrIV:667770-668285 2.2e-13 69_[-2]_2 chrII:197136-197868 2.2e-13 47_[+2]_24 chrXVI:810390-810945 6.3e-12 63_[+2]_8 chrXV:487175-487730 6.3e-12 41_[+2]_30 chrXIV:632359-632896 6.3e-12 26_[+2]_45 chrXIV:102408-103079 6.3e-12 27_[+2]_44 chrXII:975730-976309 6.3e-12 53_[-2]_18 chrVII:730916-731440 6.3e-12 14_[+2]_57 chrIII:127507-127924 6.3e-12 55_[+2]_16 chrIV:359312-359898 2.7e-11 27_[+2]_44 chrX:617742-618182 4.5e-11 12_[+2]_59 chrXIII:372163-372773 5.2e-11 67_[-2]_4 chrXII:687613-688224 5.2e-11 30_[-2]_41 chrXI:308016-308427 5.2e-11 12_[-2]_59 chrVIII:85022-85641 5.2e-11 56_[-2]_15 chrVII:823237-823707 5.2e-11 65_[+2]_6 chrVII:412106-412624 5.2e-11 19_[-2]_52 chrV:469237-469772 5.2e-11 7_[+2]_64 chrXV:853989-854439 6.7e-11 62_[-2]_9 chrXII:214646-215224 6.7e-11 37_[-2]_34 chrX:58735-59582 6.7e-11 30_[-2]_41 chrIX:174807-175320 6.7e-11 22_[+2]_49 chrII:266132-266707 6.7e-11 13_[+2]_58 chrXIV:374626-375197 1.2e-10 12_[+2]_59 chrVII:857239-857650 1.7e-10 63_[-2]_8 chrVII:205287-205809 1.7e-10 28_[+2]_43 chrIV:1461478-1462177 1.7e-10 18_[-2]_53 chrVI:191310-191880 3.4e-10 35_[-2]_36 chrXIII:352064-352472 3.8e-10 67_[+2]_4 chrVIII:358239-358908 3.8e-10 12_[-2]_59 chrVIII:237670-238213 3.8e-10 14_[-2]_57 chrVI:157676-158305 3.8e-10 33_[-2]_38 chrIV:1304948-1306341 3.8e-10 40_[+2]_31 chrIV:980749-981315 3.8e-10 40_[-2]_31 chrIV:437480-438107 3.8e-10 33_[+2]_38 chrI:182327-182810 3.8e-10 51_[-2]_20 chrXI:83951-84455 1.2e-09 60_[+2]_11 chrII:9296-9934 1.2e-09 23_[+2]_48 chrX:197124-197670 2e-09 5_[-2]_66 chrIV:410108-410715 2e-09 22_[+2]_49 chrVII:700108-701308 3.5e-09 22_[+2]_49 chrXII:605131-605687 4.1e-09 40_[-2]_31 chrIV:884092-884669 4.1e-09 35_[+2]_36 chrXVI:581654-582469 6.2e-09 55_[+2]_16 chrXIII:480403-480925 6.2e-09 46_[-2]_25 chrVII:876095-876728 6.2e-09 37_[+2]_34 chrVI:226524-226961 6.2e-09 34_[-2]_37 chrIV:1352317-1352772 6.2e-09 10_[-2]_61 chrIV:1150216-1151582 2.5e-08 59_[-2]_12 chrXI:1-276 1e-07 52_[-2]_19 chrIII:316218-316618 1e-07 51_[+2]_20 chrXVI:433444-434397 1.1e-07 54_[+2]_17 chrX:390844-391308 1.2e-07 56_[-2]_15 chrIV:1175518-1176179 1.2e-07 35_[+2]_36 chrIV:1524033-1525649 1.9e-07 59_[-2]_12 chrIII:2-1645 1.9e-07 71_[+2] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YKTGGCCSAGTBGGTWAAGSSVYVBRCTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YKTGGCCSAGTBGGTWAAGSSVYVBRCTT width=29 seqs=60 chrXVI:880067-880570 ( 68) CTTGGCCCAGTTGGTTAAGGCACCGTGCT 1 chrXIV:602115-602577 ( 22) CTTGGCCCAGTTGGTTAAGGCACCGTGCT 1 chrV:550992-551743 ( 8) CTTGGCCCAGTTGGTTAAGGCACCGTGCT 1 chrV:443034-443544 ( 4) CTTGGCCCAGTTGGTTAAGGCACCGTGCT 1 chrIV:667770-668285 ( 70) CTTGGCCCAGTTGGTTAAGGCACCGTGCT 1 chrII:197136-197868 ( 48) CTTGGCCCAGTTGGTTAAGGCACCGTGCT 1 chrXVI:810390-810945 ( 64) CATGGCCAAGTTGGTTAAGGCGTGCGACT 1 chrXV:487175-487730 ( 42) CATGGCCAAGTTGGTTAAGGCGTGCGACT 1 chrXIV:632359-632896 ( 27) CATGGCCAAGTTGGTTAAGGCGTGCGACT 1 chrXIV:102408-103079 ( 28) CATGGCCAAGTTGGTTAAGGCGTGCGACT 1 chrXII:975730-976309 ( 54) CATGGCCAAGTTGGTTAAGGCGTGCGACT 1 chrVII:730916-731440 ( 15) CATGGCCAAGTTGGTTAAGGCGTGCGACT 1 chrIII:127507-127924 ( 56) CATGGCCAAGTTGGTTAAGGCGTGCGACT 1 chrIV:359312-359898 ( 28) GTTAGCTCAGTTGGTAGAGCGTTCGGCTT 1 chrX:617742-618182 ( 13) TTTGGCCGAGTGGTTTAAGGCGTCAGATT 1 chrXIII:372163-372773 ( 68) CGTGGTCTAGTCGGTTATGGCATCTGCTT 1 chrXII:687613-688224 ( 31) CGTGGTCTAGTCGGTTATGGCATCTGCTT 1 chrXI:308016-308427 ( 13) CGTGGTCTAGTCGGTTATGGCATCTGCTT 1 chrVIII:85022-85641 ( 57) CGTGGTCTAGTCGGTTATGGCATCTGCTT 1 chrVII:823237-823707 ( 66) CGTGGTCTAGTCGGTTATGGCATCTGCTT 1 chrVII:412106-412624 ( 20) CGTGGTCTAGTCGGTTATGGCATCTGCTT 1 chrV:469237-469772 ( 8) CGTGGTCTAGTCGGTTATGGCATCTGCTT 1 chrXV:853989-854439 ( 63) CATGGCGCAGTTGGTAGCGCGCTTCCCTT 1 chrXII:214646-215224 ( 38) CATGGCGCAGTTGGTAGCGCGCTTCCCTT 1 chrX:58735-59582 ( 31) TATGGCCAAGTTGGTAAGGCGCCACACTA 1 chrIX:174807-175320 ( 23) TATGGCCAAGTTGGTAAGGCGCCACACTA 1 chrII:266132-266707 ( 14) TATGGCCAAGTTGGTAAGGCGCCACACTA 1 chrXIV:374626-375197 ( 13) CTTAGCTCAGTTGGGAGAGCGCCAGACTG 1 chrVII:857239-857650 ( 64) TTTGGCCGAGCGGTCTAAGGCGCCTGATT 1 chrVII:205287-205809 ( 29) TTTGGCCGAGCGGTCTAAGGCGCCTGATT 1 chrIV:1461478-1462177 ( 19) TTTGGCCGAGCGGTCTAAGGCGCCTGATT 1 chrVI:191310-191880 ( 36) AGTGGCCGAGTGGTTAAGGCGATGCCCTG 1 chrXIII:352064-352472 ( 68) TTTAGCTCAGTTGGGAGAGCGCCAGACTG 1 chrVIII:358239-358908 ( 13) TTTAGCTCAGTTGGGAGAGCGCCAGACTG 1 chrVIII:237670-238213 ( 15) TTTAGCTCAGTTGGGAGAGCGCCAGACTG 1 chrVI:157676-158305 ( 34) TTTAGCTCAGTTGGGAGAGCGCCAGACTG 1 chrIV:1304948-1306341 ( 41) CTTGGCCGAGTGGTTAAGGCGAAAGATTA 1 chrIV:980749-981315 ( 41) CTTGGCCGAGTGGTTAAGGCGAAAGATTA 1 chrIV:437480-438107 ( 34) CTTGGCCGAGTGGTTAAGGCGAAAGATTA 1 chrI:182327-182810 ( 52) CTTGGCCGAGTGGTTAAGGCGAAAGATTA 1 chrXI:83951-84455 ( 61) GTTGGCCGAGTGGTCTAAGGCGGCAGACT 1 chrII:9296-9934 ( 24) GTTGGCCGAGTGGTCTAAGGCGGCAGACT 1 chrX:197124-197670 ( 6) TGTGGCGTAGTCGGTAGCGCGCTCCCTTA 1 chrIV:410108-410715 ( 23) TGTGGCGTAGTCGGTAGCGCGCTCCCTTA 1 chrVII:700108-701308 ( 23) TCTGGCCGAGTGGTCTAAGGCGTCAGGTC 1 chrXII:605131-605687 ( 41) TGTAGCTCAGTGGTTAGAGCTTCGTGCTT 1 chrIV:884092-884669 ( 36) TGTAGCTCAGTGGTTAGAGCTTCGTGCTT 1 chrXVI:581654-582469 ( 56) GTTGGCGCAATCGGTAGCGCGTATGACTC 1 chrXIII:480403-480925 ( 47) GTTGGCGCAATCGGTAGCGCGTATGACTC 1 chrVII:876095-876728 ( 38) GTTGGCGCAATCGGTAGCGCGTATGACTC 1 chrVI:226524-226961 ( 35) GTTGGCGCAATCGGTAGCGCGTATGACTC 1 chrIV:1352317-1352772 ( 11) GTTGGCGCAATCGGTAGCGCGTATGACTC 1 chrIV:1150216-1151582 ( 60) AGTGGCCGAGTGGTTAAGGCGATGCCTGC 1 chrXI:1-276 ( 53) TATGGTTGAGTGGGGCAGGGTAACGAGTG 1 chrIII:316218-316618 ( 52) TATGGTTGAGTGGGGCAGGGTAACGAGTG 1 chrXVI:433444-434397 ( 55) GGTGGCCAAGATGTTGAAGGCCGGTACCG 1 chrX:390844-391308 ( 57) AGTAGCTCAGTAGGAAGAGCGTCAGTCTC 1 chrIV:1175518-1176179 ( 36) AGTAGCTCAGTAGGAAGAGCGTCAGTCTC 1 chrIV:1524033-1525649 ( 60) CTTGCCTCAGCGGTCTATACCCTGTGCCA 1 chrIII:2-1645 ( 72) CTTGCCTCAGCGGTCTATACCCTGTGCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YKTGGCCSAGTBGGTWAAGSSVYVBRCTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 37368 bayes= 10.5563 E= 1.3e-227 -226 142 -27 -9 -45 -344 56 60 -1255 -1255 -1255 165 -94 -1255 221 -1255 -1255 -244 242 -1255 -1255 223 -1255 -109 -1255 177 -27 -45 -80 121 47 -109 165 -1255 -1255 -1255 -194 -1255 234 -1255 -426 -112 -1255 149 -326 37 81 38 -1255 -1255 247 -1255 -1255 -1255 195 -9 -326 -44 -63 117 55 -244 -344 60 110 -1255 81 -1255 69 -27 2 -109 -326 -1255 242 -1255 -1255 147 147 -1255 -1255 147 126 -226 13 47 37 -94 -80 95 -185 38 -45 121 37 -145 -226 56 121 -35 6 -85 126 -126 -56 152 -27 -145 -1255 73 -344 110 -80 -27 -27 69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YKTGGCCSAGTBGGTWAAGSSVYVBRCTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 60 E= 1.3e-227 0.066667 0.483333 0.150000 0.300000 0.233333 0.016667 0.266667 0.483333 0.000000 0.000000 0.000000 1.000000 0.166667 0.000000 0.833333 0.000000 0.000000 0.033333 0.966667 0.000000 0.000000 0.850000 0.000000 0.150000 0.000000 0.616667 0.150000 0.233333 0.183333 0.416667 0.250000 0.150000 1.000000 0.000000 0.000000 0.000000 0.083333 0.000000 0.916667 0.000000 0.016667 0.083333 0.000000 0.900000 0.033333 0.233333 0.316667 0.416667 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.700000 0.300000 0.033333 0.133333 0.116667 0.716667 0.466667 0.033333 0.016667 0.483333 0.683333 0.000000 0.316667 0.000000 0.516667 0.150000 0.183333 0.150000 0.033333 0.000000 0.966667 0.000000 0.000000 0.500000 0.500000 0.000000 0.000000 0.500000 0.433333 0.066667 0.350000 0.250000 0.233333 0.166667 0.183333 0.350000 0.050000 0.416667 0.233333 0.416667 0.233333 0.116667 0.066667 0.266667 0.416667 0.250000 0.333333 0.100000 0.433333 0.133333 0.216667 0.516667 0.150000 0.116667 0.000000 0.300000 0.016667 0.683333 0.183333 0.150000 0.150000 0.516667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YKTGGCCSAGTBGGTWAAGSSVYVBRCTT MEME-2 regular expression -------------------------------------------------------------------------------- [CT][TGA]TGGC[CT][CG]AGT[TGC]G[GT]T[TA][AG]AG[CG][CG][ACG][TC][CAG][GCT][GA][CA][TC]T -------------------------------------------------------------------------------- Time 1057.84 secs. ******************************************************************************** ******************************************************************************** MOTIF YACCACTAMACCACDYSCVC MEME-3 width = 20 sites = 39 llr = 595 E-value = 1.7e-066 ******************************************************************************** -------------------------------------------------------------------------------- Motif YACCACTAMACCACDYSCVC MEME-3 Description -------------------------------------------------------------------------------- Simplified A 28::73:838:1915:1231 pos.-specific C 31aa362:61a818:53637 probability G :1:::::212::::32623: matrix T 51:::18::::2:133::12 bits 2.5 * 2.2 ** * 2.0 ** * 1.7 ** * Relative 1.5 ** * * Entropy 1.2 ** ** * * (22.0 bits) 1.0 ** ** ***** * * 0.7 ************* *** * 0.5 ************** *** * 0.2 ******************** 0.0 -------------------- Multilevel TACCACTACACCACACGCCC consensus C CAC A GTC G sequence TG A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YACCACTAMACCACDYSCVC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXV:464186-464687 - 64 1.76e-11 GCGAGAATCA TACCACTAGACCACACGCCC TTGTTAACTT chrXIII:195914-196443 + 23 1.76e-11 GCGAGAATCA TACCACTAGACCACACGCCC TTGTGAACTT chrI:138854-139395 - 78 1.76e-11 TCA TACCACTAGACCACACGCCC GTACTAATTG chrXVI:571561-573072 - 3 2.16e-10 CGTTGGATTT TACCACTAAACCACTTGCGC GA chrXV:226406-226945 + 37 2.16e-10 CGTTGGATTT TACCACTAAACCACTTGCGC TGAATTTCTT chrXIII:183702-184200 + 49 2.16e-10 CGTTGGATTT TACCACTAAACCACTTGCGC GATCTTTATT chrX:531454-532220 - 42 2.16e-10 CGTTGGATTT TACCACTAAACCACTTGCGC TCACTAATTG chrX:396550-397094 + 6 2.16e-10 GATTT TACCACTAAACCACTTGCGC TTACTTTTGA chrIV:992549-993090 - 63 2.16e-10 CGTTGGATTT TACCACTAAACCACTTGCGC TCACAATTGT chrIV:83230-83805 - 81 2.16e-10 . TACCACTAAACCACTTGCGC TAAGTGAACT chrXIII:5313-5736 + 70 7.02e-10 TATACACCCA CACCCACACACCACACCCAC ACCCACACAC chrXII:5471-5921 + 22 7.02e-10 ATATACACCA CACCCACACACCACACCCAC ACCACACCCA chrVIII:562279-562580 - 79 7.02e-10 CA CACCCACACACCACACCCAC ACTTTTCACA chrVI:4473-5117 + 55 7.02e-10 ACCACACCCA CACCCACACACCACACCCAC ACCCTAATAC chrIX:2-205 + 1 7.02e-10 . CACCCACACACCACACCCAC ACCAACTCTC chrXIV:631721-632150 + 13 2.67e-09 GCGAGAATCA TACCTCTAGACCACACGCCC GGTAGAAGTT chrX:355086-355735 - 14 3.50e-08 TCAGACGCGT TGCCATTACGCCACGCGAGC TACTGTTTGT chrIV:568536-569220 - 55 3.50e-08 TCAGACGCGT TGCCATTACGCCACGCGAGC TACTATTTGT chrVIII:555854-557191 - 33 9.12e-08 TCACCATCAC TACCACCTCACCACATGCCA TACTCACCTT chrXIV:96005-96658 + 12 1.20e-07 GTGGGATGAT AACCACTACACTAACCGCCC ATGTGTTGGA chrIV:1256867-1257331 + 12 1.85e-07 CATGAATTCT AACCACTGAACCACTTTCGC TAAGAAGATC chrXVI:338705-339162 + 17 2.19e-07 CCCTGCGCGC TTCCACTGCGCCACGGCGCT GCTAAATCAT chrXV:709952-710534 - 9 2.19e-07 CCCTGCGCGC TTCCACTGCGCCACGGCGCT GCTAATTC chrX:517609-518177 + 23 2.19e-07 CCCTGCGCGC TTCCACTGCGCCACGGCGCT TAACTTTTAT chrXII:489288-489554 - 49 2.59e-07 GCGTATGGTC ACCCACTACACTACTCGGTC AGGCTCTTAC chrIV:644989-645393 + 65 2.59e-07 CGAAAGTGAT AACCACTACACTATAGGACC GTAACAACTG chrIII:168067-168632 + 54 2.59e-07 CGAAAGTGAT AACCACTACACTATAGGACC AGGACTTCTT chrXIV:499009-499780 - 81 2.82e-07 . CACCAGTGCACCACATGAGT TTACACATCA chrXIV:783348-784325 - 81 3.59e-07 . TACCACTAACCACCGCCCAC CATAACCGTT chrIV:525062-525377 - 26 3.59e-07 ATTTTCACAA CACCCATACACTACACCAAA AATATTCCTA chrIV:411240-411652 + 39 3.89e-07 AAACAAATCA AACACCCACACCCCGGGCAC CCAAAGTCCC chrIV:28-325 + 12 3.89e-07 ACCACACCCA CACCCACACACCACACACTA CCCCTAACAC chrXVI:866445-866763 - 27 7.75e-07 AACGGAAATA CACCCATACACCAAACCTCT GTGAATTTGA chrXV:968129-968410 - 42 7.75e-07 GAGCAGCGCA CGCCCACGCACCCCACGCTT TTGAGATCCA chrXII:11017-12036 + 15 8.34e-07 TCTCTCTACT TACCACTAACCACCGTCCAC CATAACCGTT chrVII:856763-856951 - 50 1.28e-06 TGAGGGTACC CGCCCATACACCGCACCAAT GGAACTAGCA chrVIII:466739-467221 - 61 1.47e-06 TGCAACGCTC TACCACTAAGCTAAGGAGGC TAAAAATACA chrVII:1003986-1004430 - 59 1.47e-06 TGCAACGCTC TACCACTAAGCTAAGGAGGC AAACCCTTGA chrX:424330-424744 + 2 2.20e-06 G CCGCCTTAGACCACTCGGCC AACCCTCCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YACCACTAMACCACDYSCVC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:464186-464687 1.8e-11 63_[-3]_17 chrXIII:195914-196443 1.8e-11 22_[+3]_58 chrI:138854-139395 1.8e-11 77_[-3]_3 chrXVI:571561-573072 2.2e-10 2_[-3]_78 chrXV:226406-226945 2.2e-10 36_[+3]_44 chrXIII:183702-184200 2.2e-10 48_[+3]_32 chrX:531454-532220 2.2e-10 41_[-3]_39 chrX:396550-397094 2.2e-10 5_[+3]_75 chrIV:992549-993090 2.2e-10 62_[-3]_18 chrIV:83230-83805 2.2e-10 80_[-3] chrXIII:5313-5736 7e-10 69_[+3]_11 chrXII:5471-5921 7e-10 21_[+3]_59 chrVIII:562279-562580 7e-10 78_[-3]_2 chrVI:4473-5117 7e-10 54_[+3]_26 chrIX:2-205 7e-10 [+3]_80 chrXIV:631721-632150 2.7e-09 12_[+3]_68 chrX:355086-355735 3.5e-08 13_[-3]_67 chrIV:568536-569220 3.5e-08 54_[-3]_26 chrVIII:555854-557191 9.1e-08 32_[-3]_48 chrXIV:96005-96658 1.2e-07 11_[+3]_69 chrIV:1256867-1257331 1.9e-07 11_[+3]_69 chrXVI:338705-339162 2.2e-07 16_[+3]_64 chrXV:709952-710534 2.2e-07 8_[-3]_72 chrX:517609-518177 2.2e-07 22_[+3]_58 chrXII:489288-489554 2.6e-07 48_[-3]_32 chrIV:644989-645393 2.6e-07 64_[+3]_16 chrIII:168067-168632 2.6e-07 53_[+3]_27 chrXIV:499009-499780 2.8e-07 80_[-3] chrXIV:783348-784325 3.6e-07 80_[-3] chrIV:525062-525377 3.6e-07 25_[-3]_55 chrIV:411240-411652 3.9e-07 38_[+3]_42 chrIV:28-325 3.9e-07 11_[+3]_69 chrXVI:866445-866763 7.8e-07 26_[-3]_54 chrXV:968129-968410 7.8e-07 41_[-3]_39 chrXII:11017-12036 8.3e-07 14_[+3]_66 chrVII:856763-856951 1.3e-06 49_[-3]_31 chrVIII:466739-467221 1.5e-06 60_[-3]_20 chrVII:1003986-1004430 1.5e-06 58_[-3]_22 chrX:424330-424744 2.2e-06 1_[+3]_79 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YACCACTAMACCACDYSCVC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YACCACTAMACCACDYSCVC width=20 seqs=39 chrXV:464186-464687 ( 64) TACCACTAGACCACACGCCC 1 chrXIII:195914-196443 ( 23) TACCACTAGACCACACGCCC 1 chrI:138854-139395 ( 78) TACCACTAGACCACACGCCC 1 chrXVI:571561-573072 ( 3) TACCACTAAACCACTTGCGC 1 chrXV:226406-226945 ( 37) TACCACTAAACCACTTGCGC 1 chrXIII:183702-184200 ( 49) TACCACTAAACCACTTGCGC 1 chrX:531454-532220 ( 42) TACCACTAAACCACTTGCGC 1 chrX:396550-397094 ( 6) TACCACTAAACCACTTGCGC 1 chrIV:992549-993090 ( 63) TACCACTAAACCACTTGCGC 1 chrIV:83230-83805 ( 81) TACCACTAAACCACTTGCGC 1 chrXIII:5313-5736 ( 70) CACCCACACACCACACCCAC 1 chrXII:5471-5921 ( 22) CACCCACACACCACACCCAC 1 chrVIII:562279-562580 ( 79) CACCCACACACCACACCCAC 1 chrVI:4473-5117 ( 55) CACCCACACACCACACCCAC 1 chrIX:2-205 ( 1) CACCCACACACCACACCCAC 1 chrXIV:631721-632150 ( 13) TACCTCTAGACCACACGCCC 1 chrX:355086-355735 ( 14) TGCCATTACGCCACGCGAGC 1 chrIV:568536-569220 ( 55) TGCCATTACGCCACGCGAGC 1 chrVIII:555854-557191 ( 33) TACCACCTCACCACATGCCA 1 chrXIV:96005-96658 ( 12) AACCACTACACTAACCGCCC 1 chrIV:1256867-1257331 ( 12) AACCACTGAACCACTTTCGC 1 chrXVI:338705-339162 ( 17) TTCCACTGCGCCACGGCGCT 1 chrXV:709952-710534 ( 9) TTCCACTGCGCCACGGCGCT 1 chrX:517609-518177 ( 23) TTCCACTGCGCCACGGCGCT 1 chrXII:489288-489554 ( 49) ACCCACTACACTACTCGGTC 1 chrIV:644989-645393 ( 65) AACCACTACACTATAGGACC 1 chrIII:168067-168632 ( 54) AACCACTACACTATAGGACC 1 chrXIV:499009-499780 ( 81) CACCAGTGCACCACATGAGT 1 chrXIV:783348-784325 ( 81) TACCACTAACCACCGCCCAC 1 chrIV:525062-525377 ( 26) CACCCATACACTACACCAAA 1 chrIV:411240-411652 ( 39) AACACCCACACCCCGGGCAC 1 chrIV:28-325 ( 12) CACCCACACACCACACACTA 1 chrXVI:866445-866763 ( 27) CACCCATACACCAAACCTCT 1 chrXV:968129-968410 ( 42) CGCCCACGCACCCCACGCTT 1 chrXII:11017-12036 ( 15) TACCACTAACCACCGTCCAC 1 chrVII:856763-856951 ( 50) CGCCCATACACCGCACCAAT 1 chrVIII:466739-467221 ( 61) TACCACTAAGCTAAGGAGGC 1 chrVII:1003986-1004430 ( 59) TACCACTAAGCTAAGGAGGC 1 chrX:424330-424744 ( 2) CCGCCTTAGACCACTCGGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YACCACTAMACCACDYSCVC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 42039 bayes= 10.9942 E= 1.7e-066 -105 77 -1193 75 127 -182 -82 -205 -1193 243 -281 -1193 -363 243 -1193 -1193 106 77 -1193 -363 -32 183 -281 -205 -1193 35 -1193 127 136 -1193 -23 -363 -5 164 -49 -1193 127 -182 -1 -1193 -1193 247 -1193 -1193 -264 209 -1193 -83 145 -82 -281 -1193 -164 223 -1193 -264 53 -281 51 -32 -1193 151 18 -18 -205 88 164 -363 -83 177 -1 -363 -32 88 88 -205 -205 204 -1193 -83 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YACCACTAMACCACDYSCVC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 39 E= 1.7e-066 0.153846 0.307692 0.000000 0.538462 0.769231 0.051282 0.102564 0.076923 0.000000 0.974359 0.025641 0.000000 0.025641 0.974359 0.000000 0.000000 0.666667 0.307692 0.000000 0.025641 0.256410 0.641026 0.025641 0.076923 0.000000 0.230769 0.000000 0.769231 0.820513 0.000000 0.153846 0.025641 0.307692 0.564103 0.128205 0.000000 0.769231 0.051282 0.179487 0.000000 0.000000 1.000000 0.000000 0.000000 0.051282 0.769231 0.000000 0.179487 0.871795 0.102564 0.025641 0.000000 0.102564 0.846154 0.000000 0.051282 0.461538 0.025641 0.256410 0.256410 0.000000 0.512821 0.205128 0.282051 0.076923 0.333333 0.564103 0.025641 0.179487 0.615385 0.179487 0.025641 0.256410 0.333333 0.333333 0.076923 0.076923 0.743590 0.000000 0.179487 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YACCACTAMACCACDYSCVC MEME-3 regular expression -------------------------------------------------------------------------------- [TC]ACC[AC][CA][TC]A[CA]ACCAC[AGT][CTG][GC]C[CGA]C -------------------------------------------------------------------------------- Time 1293.68 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:7-1377 3.74e-01 100 chrI:81890-82271 1.80e-01 100 chrI:138854-139395 6.73e-08 77_[-3(1.76e-11)]_3 chrI:141721-143705 6.10e-02 100 chrI:166006-166809 8.58e-01 100 chrI:180903-181517 1.11e-02 100 chrI:182327-182810 1.23e-09 11_[-1(3.53e-05)]_11_[-2(3.81e-10)]_\ 20 chrI:229231-230193 2.22e-02 100 chrII:6044-7131 7.72e-01 100 chrII:9296-9934 5.95e-11 23_[+2(1.17e-09)]_13_[+1(1.46e-05)]_\ 6 chrII:36134-36569 7.70e-01 100 chrII:44961-45350 9.26e-01 100 chrII:60086-61340 9.62e-01 100 chrII:87964-88555 7.76e-01 100 chrII:88971-89998 4.12e-01 100 chrII:165058-165692 3.61e-01 100 chrII:167650-169698 3.22e-01 100 chrII:181315-181677 1.47e-01 100 chrII:197136-197868 7.57e-10 47_[+2(2.23e-13)]_24 chrII:226824-227683 6.66e-01 100 chrII:254777-255790 9.73e-01 100 chrII:266132-266707 7.00e-15 13_[+2(6.66e-11)]_2_[+1(1.77e-10)]_\ 27 chrII:301164-301584 9.37e-01 100 chrII:326581-327610 8.52e-01 100 chrII:332215-333446 2.19e-01 100 chrII:347372-348139 4.35e-01 100 chrII:350465-351151 6.62e-02 100 chrII:405585-406309 2.84e-10 16_[+1(1.80e-12)]_23_[+2(7.77e-05)]_\ 3 chrII:415477-415941 8.39e-01 100 chrII:476828-477786 4.89e-01 100 chrII:478964-479461 7.63e-01 100 chrII:556081-558470 2.26e-01 100 chrII:592351-593457 9.08e-02 100 chrII:604090-607612 7.41e-01 100 chrII:644955-645492 2.47e-09 28_[+1(6.07e-13)]_43 chrII:680934-682212 6.31e-01 100 chrIII:2-1645 2.07e-05 71_[+2(1.90e-07)] chrIII:11069-11549 9.69e-01 100 chrIII:13981-16629 9.72e-01 100 chrIII:28867-31938 3.15e-01 100 chrIII:81980-82788 9.53e-01 100 chrIII:123303-123833 4.90e-10 67_[-1(1.56e-13)]_4 chrIII:127507-127924 4.18e-09 55_[+2(6.25e-12)]_16 chrIII:142173-143114 5.54e-01 100 chrIII:161727-163908 9.44e-01 100 chrIII:168067-168632 4.39e-13 9_[-1(3.35e-11)]_15_[+3(2.59e-07)]_\ 27 chrIII:177032-179277 9.09e-01 100 chrIII:227622-228215 1.72e-02 100 chrIII:292287-293093 8.67e-01 100 chrIII:293644-294419 8.38e-01 100 chrIII:294590-295934 9.19e-01 100 chrIII:316218-316618 1.65e-05 51_[+2(9.97e-08)]_20 chrIV:28-325 3.07e-04 11_[+3(3.89e-07)]_69 chrIV:83230-83805 4.04e-07 80_[-3(2.16e-10)] chrIV:116862-118232 3.89e-01 100 chrIV:129455-131003 8.48e-01 100 chrIV:217027-218081 8.63e-01 100 chrIV:221038-222374 7.55e-01 100 chrIV:229449-230688 8.76e-01 100 chrIV:307973-309778 4.51e-01 100 chrIV:321687-323602 4.78e-01 100 chrIV:340181-341628 9.90e-01 100 chrIV:355120-356933 1.22e-01 100 chrIV:358108-358466 4.81e-01 100 chrIV:359312-359898 1.22e-07 27_[+2(2.66e-11)]_44 chrIV:410108-410715 3.98e-13 22_[+2(2.05e-09)]_2_[+1(1.07e-08)]_\ 18 chrIV:411240-411652 2.62e-05 38_[+3(3.89e-07)]_42 chrIV:433979-435095 9.09e-01 100 chrIV:437480-438107 1.28e-07 33_[+2(3.81e-10)]_38 chrIV:488415-489138 3.67e-02 67_[+1(2.08e-05)]_4 chrIV:490444-491898 6.94e-01 100 chrIV:519495-520297 9.06e-01 100 chrIV:520458-521300 3.63e-01 100 chrIV:525062-525377 2.21e-03 25_[-3(3.59e-07)]_55 chrIV:540954-542089 6.53e-01 100 chrIV:568536-569220 6.50e-05 54_[-3(3.50e-08)]_26 chrIV:579010-581059 8.54e-01 100 chrIV:619636-620302 6.81e-06 58_[-1(4.78e-10)]_13 chrIV:644989-645393 4.39e-13 20_[-1(3.35e-11)]_15_[+3(2.59e-07)]_\ 16 chrIV:667770-668285 1.06e-18 37_[-1(1.14e-12)]_3_[-2(2.23e-13)]_\ 2 chrIV:802120-803048 9.72e-01 100 chrIV:835786-836307 3.40e-02 50_[-2(5.70e-05)]_21 chrIV:884092-884669 2.32e-10 35_[+2(4.12e-09)]_36 chrIV:915821-916271 9.62e-01 100 chrIV:946138-946617 6.87e-06 36_[+1(6.34e-10)]_35 chrIV:980749-981315 1.23e-09 [-1(3.53e-05)]_11_[-2(3.81e-10)]_31 chrIV:992549-993090 1.02e-08 62_[-3(2.16e-10)]_18 chrIV:1013063-1013930 2.42e-01 100 chrIV:1016886-1017523 9.19e-09 60_[-1(6.07e-13)]_11 chrIV:1062719-1063147 7.73e-01 100 chrIV:1075227-1075836 8.67e-03 100 chrIV:1094931-1095781 7.16e-01 100 chrIV:1150216-1151582 2.81e-08 1_[-1(4.89e-05)]_29_[-2(2.55e-08)]_\ 12 chrIV:1175518-1176179 2.28e-11 35_[+2(1.24e-07)]_2_[+1(3.25e-10)]_\ 5 chrIV:1201314-1202137 9.21e-01 100 chrIV:1236814-1238479 6.01e-01 100 chrIV:1256867-1257331 7.16e-04 11_[+3(1.85e-07)]_69 chrIV:1300272-1301346 5.44e-01 100 chrIV:1304948-1306341 6.39e-08 40_[+2(3.81e-10)]_31 chrIV:1352317-1352772 3.44e-05 10_[-2(6.23e-09)]_61 chrIV:1355691-1356065 7.78e-01 100 chrIV:1359216-1360522 8.00e-01 100 chrIV:1401222-1401921 6.02e-02 100 chrIV:1402411-1403478 4.64e-01 100 chrIV:1449791-1451331 6.04e-01 100 chrIV:1461478-1462177 2.38e-07 18_[-2(1.75e-10)]_53 chrIV:1488907-1489946 9.22e-01 100 chrIV:1524033-1525649 4.87e-05 59_[-2(1.90e-07)]_12 chrIX:2-205 8.60e-06 [+3(7.02e-10)]_80 chrIX:67479-69909 2.40e-01 100 chrIX:99640-100081 3.96e-01 100 chrIX:174807-175320 7.00e-15 22_[+2(6.66e-11)]_2_[+1(1.77e-10)]_\ 18 chrIX:182509-183734 1.25e-01 100 chrIX:197300-198088 7.18e-01 100 chrIX:210497-211288 7.91e-01 100 chrIX:248640-249363 4.46e-01 100 chrIX:254235-254536 2.26e-02 66_[-3(3.38e-05)]_14 chrIX:255021-258071 1.36e-01 100 chrIX:299998-301210 6.14e-01 100 chrIX:316112-317421 7.78e-01 100 chrIX:324007-324623 7.43e-05 46_[-1(2.56e-08)]_25 chrIX:325492-326288 6.00e-01 100 chrIX:370102-370717 2.32e-01 100 chrIX:438531-439886 6.91e-01 100 chrM:58218-58901 9.99e-01 100 chrM:60479-60946 8.42e-01 100 chrM:61105-61504 5.83e-01 100 chrV:6137-6995 7.72e-01 100 chrV:51933-52881 9.86e-01 100 chrV:53473-54282 8.91e-01 100 chrV:61009-62222 7.14e-01 100 chrV:85146-85690 4.63e-01 100 chrV:85943-86947 1.92e-01 100 chrV:99653-100375 8.55e-01 100 chrV:110067-111375 1.86e-01 100 chrV:117558-118465 2.59e-01 100 chrV:130775-131425 1.13e-09 40_[-1(5.34e-11)]_1_[-2(2.34e-05)]_\ 1 chrV:135141-135722 8.77e-10 51_[-1(5.16e-13)]_20 chrV:138286-140884 7.33e-02 100 chrV:176808-177400 1.95e-01 100 chrV:207021-207730 9.42e-06 66_[+1(4.71e-08)]_5 chrV:250089-250795 3.39e-01 100 chrV:269089-270782 9.97e-01 100 chrV:288037-288754 5.29e-01 100 chrV:301566-302459 9.78e-01 100 chrV:304688-306716 9.49e-01 100 chrV:311864-312458 9.02e-02 100 chrV:321766-323260 5.42e-01 100 chrV:354649-355680 1.09e-01 100 chrV:361869-362541 7.97e-01 100 chrV:396158-397314 8.80e-01 100 chrV:406068-409209 7.15e-01 100 chrV:423104-424049 9.91e-01 100 chrV:430996-431625 3.41e-01 100 chrV:433689-434786 5.20e-01 100 chrV:434945-436045 6.49e-01 100 chrV:438151-438984 7.75e-01 100 chrV:441570-442724 5.34e-02 4_[-2(3.80e-05)]_67 chrV:443034-443544 8.88e-10 3_[-2(2.23e-13)]_68 chrV:469237-469772 8.12e-14 7_[+2(5.16e-11)]_3_[+1(4.35e-10)]_\ 32 chrV:487075-487634 1.05e-09 34_[-1(6.07e-13)]_37 chrV:492117-492591 6.00e-06 56_[-1(4.78e-10)]_15 chrV:550992-551743 5.09e-10 7_[-2(2.23e-13)]_64 chrVI:4473-5117 1.44e-06 26_[+3(1.89e-08)]_8_[+3(7.02e-10)]_\ 26 chrVI:63941-65433 3.74e-01 100 chrVI:82406-84528 7.19e-02 100 chrVI:95484-95825 6.54e-02 100 chrVI:100871-101633 2.37e-01 100 chrVI:137094-137908 3.28e-07 43_[-1(2.94e-10)]_28 chrVI:157676-158305 4.45e-08 33_[-2(3.81e-10)]_38 chrVI:161727-162480 1.99e-01 100 chrVI:167253-167960 4.73e-01 100 chrVI:180611-181228 9.50e-01 100 chrVI:191310-191880 1.66e-08 35_[-2(3.42e-10)]_36 chrVI:204752-205563 7.08e-01 100 chrVI:210409-210900 6.12e-08 22_[-1(6.34e-10)]_18_[-2(7.98e-05)]_\ 2 chrVI:221506-222086 3.58e-02 100 chrVI:223763-224160 5.74e-01 100 chrVI:226524-226961 1.40e-14 3_[-1(5.16e-13)]_2_[-2(6.23e-09)]_\ 37 chrVI:268370-270159 9.91e-01 100 chrVII:13-1869 9.69e-01 100 chrVII:10165-10664 4.62e-02 100 chrVII:73648-74420 7.13e-01 100 chrVII:110380-110971 9.42e-06 7_[-1(4.71e-08)]_64 chrVII:115212-116056 4.01e-01 100 chrVII:122056-122737 8.67e-01 100 chrVII:147397-149544 8.07e-01 100 chrVII:185391-186070 2.30e-10 41_[-1(5.16e-13)]_30 chrVII:205287-205809 1.55e-07 28_[+2(1.75e-10)]_43 chrVII:228493-228809 8.16e-01 100 chrVII:253918-254732 4.38e-01 100 chrVII:277011-277398 3.43e-01 100 chrVII:286912-288132 7.04e-01 100 chrVII:310400-312693 1.93e-01 100 chrVII:319565-320296 8.96e-01 100 chrVII:327827-329036 8.50e-01 100 chrVII:345856-346572 4.79e-01 100 chrVII:364892-366741 4.67e-01 100 chrVII:400977-401798 1.13e-01 100 chrVII:405280-405779 1.93e-08 25_[+1(1.80e-12)]_46 chrVII:412106-412624 7.79e-08 19_[-2(5.16e-11)]_52 chrVII:422911-423513 5.80e-02 100 chrVII:438562-439884 7.10e-01 100 chrVII:440293-442049 4.80e-01 100 chrVII:479132-482989 2.81e-01 100 chrVII:533564-535239 7.36e-01 100 chrVII:541553-542202 1.05e-09 57_[+1(6.07e-13)]_14 chrVII:544301-546175 8.78e-01 100 chrVII:555187-557569 5.57e-01 100 chrVII:561322-561984 1.22e-02 67_[-1(3.53e-05)]_4 chrVII:648835-649493 6.88e-01 100 chrVII:661328-661963 1.17e-01 100 chrVII:700108-701308 4.76e-12 22_[+2(3.48e-09)]_11_[+1(1.56e-07)]_\ 9 chrVII:706894-707351 4.09e-06 43_[-1(9.32e-09)]_28 chrVII:725977-727453 1.23e-01 100 chrVII:730916-731440 5.24e-16 14_[+2(6.25e-12)]_3_[+1(2.94e-10)]_\ 25 chrVII:736177-736698 9.69e-01 100 chrVII:738747-739340 6.72e-01 100 chrVII:773970-775030 3.54e-02 100 chrVII:778982-779891 9.92e-01 100 chrVII:788298-788800 3.82e-01 100 chrVII:793943-794699 6.80e-01 100 chrVII:823237-823707 6.64e-08 65_[+2(5.16e-11)]_6 chrVII:828434-829048 1.30e-08 40_[-1(1.80e-12)]_31 chrVII:844909-845930 1.94e-01 100 chrVII:856763-856951 1.50e-04 49_[-3(1.28e-06)]_31 chrVII:857239-857650 2.38e-07 63_[-2(1.75e-10)]_8 chrVII:876095-876728 2.20e-14 37_[+2(6.23e-09)]_2_[+1(5.16e-13)]_\ 3 chrVII:878319-879336 1.30e-03 18_[+3(1.49e-05)]_62 chrVII:882032-883982 2.01e-01 100 chrVII:919843-920245 9.46e-01 100 chrVII:930120-931588 4.13e-01 100 chrVII:1003986-1004430 2.12e-04 58_[-3(1.47e-06)]_22 chrVIII:34445-35582 3.88e-01 100 chrVIII:35758-36396 4.12e-01 100 chrVIII:62461-63080 9.42e-06 69_[+1(4.71e-08)]_2 chrVIII:74916-75929 9.22e-01 100 chrVIII:85022-85641 8.12e-14 24_[-1(4.35e-10)]_3_[-2(5.16e-11)]_\ 15 chrVIII:103869-104759 7.30e-02 100 chrVIII:115332-116543 7.12e-01 100 chrVIII:125914-127823 7.06e-01 100 chrVIII:132804-134742 6.54e-01 100 chrVIII:145968-146467 3.10e-02 71_[+1(2.68e-05)] chrVIII:147651-149334 6.43e-01 100 chrVIII:237670-238213 1.44e-08 14_[-2(3.81e-10)]_57 chrVIII:296890-297281 6.93e-01 100 chrVIII:358239-358908 3.45e-08 12_[-2(3.81e-10)]_59 chrVIII:381442-383509 9.97e-01 100 chrVIII:388615-389263 3.73e-07 12_[-1(5.99e-11)]_59 chrVIII:410948-411893 7.32e-01 100 chrVIII:451595-453016 1.79e-01 100 chrVIII:466739-467221 2.66e-04 60_[-3(1.47e-06)]_20 chrVIII:475266-476061 7.38e-01 100 chrVIII:505815-506518 8.60e-01 100 chrVIII:555854-557191 3.33e-04 32_[-3(9.12e-08)]_48 chrVIII:562279-562580 1.19e-05 78_[-3(7.02e-10)]_2 chrX:58735-59582 5.47e-08 30_[-2(6.66e-11)]_41 chrX:73001-77024 2.14e-01 100 chrX:90052-90453 6.37e-01 100 chrX:115478-116230 7.53e-01 100 chrX:121262-122386 2.13e-01 100 chrX:139112-141515 9.43e-01 100 chrX:156295-157963 1.40e-01 100 chrX:197124-197670 5.16e-08 5_[-2(2.05e-09)]_66 chrX:204257-205011 4.40e-01 100 chrX:227813-228721 1.19e-01 100 chrX:233707-234664 8.03e-01 100 chrX:332938-333449 4.30e-01 100 chrX:353499-354832 7.28e-01 100 chrX:355086-355735 1.55e-13 13_[-3(3.50e-08)]_15_[+1(1.80e-12)]_\ 23 chrX:374196-374835 3.24e-09 48_[-1(1.80e-12)]_23 chrX:377688-378576 3.72e-01 100 chrX:390844-391308 2.28e-11 25_[-1(3.25e-10)]_2_[-2(1.24e-07)]_\ 15 chrX:396550-397094 2.98e-06 5_[+3(2.16e-10)]_75 chrX:414721-415382 3.84e-10 [+1(5.16e-13)]_71 chrX:415726-416720 6.86e-01 100 chrX:422648-423458 5.27e-02 100 chrX:424330-424744 1.04e-04 1_[+3(2.20e-06)]_79 chrX:517609-518177 2.24e-04 22_[+3(2.19e-07)]_58 chrX:523744-524313 1.22e-02 41_[-1(3.53e-05)]_30 chrX:531454-532220 1.02e-08 41_[-3(2.16e-10)]_39 chrX:538316-539141 7.38e-01 100 chrX:540446-541772 4.50e-01 100 chrX:542743-543739 4.46e-01 100 chrX:607815-609089 7.51e-01 100 chrX:617742-618182 3.74e-11 12_[+2(4.54e-11)]_59 chrX:651188-651668 9.50e-01 100 chrX:651936-652925 8.36e-01 100 chrX:663636-664204 3.40e-01 100 chrX:702731-703649 6.00e-01 100 chrX:745260-745743 1.12e-01 3_[-3(7.88e-05)]_77 chrXI:1-276 1.53e-06 52_[-2(9.97e-08)]_19 chrXI:25478-26570 9.94e-01 100 chrXI:46546-47192 9.55e-01 100 chrXI:74440-74955 1.75e-06 13_[+1(2.94e-10)]_58 chrXI:83951-84455 1.04e-09 60_[+2(1.17e-09)]_11 chrXI:108507-109108 9.15e-01 100 chrXI:109567-110472 3.94e-01 100 chrXI:140730-142495 8.42e-01 100 chrXI:158193-159627 9.44e-01 100 chrXI:162003-162785 5.60e-01 100 chrXI:202815-203326 7.08e-10 14_[+1(5.16e-13)]_57 chrXI:219412-220129 9.75e-01 100 chrXI:302529-303703 8.34e-01 100 chrXI:308016-308427 7.79e-08 12_[-2(5.16e-11)]_59 chrXI:313136-314018 8.03e-01 100 chrXI:379482-380060 5.94e-01 100 chrXI:430791-431697 8.52e-01 100 chrXI:458323-459116 9.77e-01 100 chrXI:490216-491340 7.31e-01 100 chrXI:513196-513932 9.36e-01 100 chrXI:551239-551768 5.97e-01 100 chrXI:578758-579316 2.82e-07 37_[+1(3.35e-11)]_34 chrXI:617676-619232 8.15e-01 100 chrXI:665355-666797 7.77e-01 100 chrXII:6-230 9.76e-01 100 chrXII:5471-5921 3.30e-06 21_[+3(7.02e-10)]_10_[+3(7.20e-07)]_\ 29 chrXII:11017-12036 4.38e-06 14_[+3(8.34e-07)]_14_[-2(2.38e-06)]_\ 23 chrXII:48599-49112 4.68e-01 100 chrXII:84167-84647 3.43e-01 100 chrXII:91494-92871 9.68e-01 100 chrXII:167712-168542 6.61e-01 100 chrXII:199089-199699 1.02e-01 100 chrXII:202489-203048 6.94e-01 100 chrXII:209926-210558 4.81e-01 100 chrXII:214646-215224 3.20e-17 6_[-1(1.82e-11)]_2_[-2(6.66e-11)]_\ 34 chrXII:232089-234251 9.73e-02 67_[+1(9.92e-05)]_4 chrXII:241529-242786 7.62e-01 100 chrXII:262712-263936 4.23e-01 100 chrXII:282162-283063 6.88e-01 100 chrXII:348194-348885 9.43e-01 100 chrXII:365863-366598 1.57e-01 100 chrXII:369202-370234 2.98e-01 100 chrXII:374187-374687 4.22e-06 4_[+1(4.78e-10)]_67 chrXII:403966-404650 5.18e-01 100 chrXII:426906-427506 9.27e-05 11_[+1(2.56e-08)]_60 chrXII:448480-449117 9.83e-01 100 chrXII:489288-489554 9.72e-07 48_[-3(2.59e-07)]_32 chrXII:498428-499900 9.59e-02 100 chrXII:522130-522999 7.80e-01 100 chrXII:592352-593227 8.61e-01 100 chrXII:605131-605687 2.32e-10 40_[-2(4.12e-09)]_31 chrXII:628126-629109 1.00e+00 100 chrXII:637164-640318 6.46e-01 100 chrXII:650368-651273 9.38e-01 100 chrXII:656679-657984 3.43e-02 100 chrXII:673287-674521 9.87e-01 100 chrXII:687613-688224 7.79e-08 30_[-2(5.16e-11)]_41 chrXII:712247-713597 9.05e-01 100 chrXII:729972-730659 1.92e-01 100 chrXII:731825-732266 5.25e-01 100 chrXII:734699-735245 9.47e-01 100 chrXII:780671-781903 1.78e-01 100 chrXII:784126-784803 6.27e-02 2_[+1(4.89e-05)]_69 chrXII:793718-797429 7.85e-01 100 chrXII:805349-806199 9.80e-01 100 chrXII:806420-807317 9.75e-01 100 chrXII:817715-820540 3.95e-01 100 chrXII:837656-839025 9.12e-02 100 chrXII:855668-857980 6.72e-01 100 chrXII:875249-875694 2.54e-07 13_[+1(3.35e-11)]_58 chrXII:897629-899609 6.34e-01 100 chrXII:921645-922629 3.68e-01 100 chrXII:932064-932525 9.70e-01 100 chrXII:962805-963751 5.31e-02 57_[+1(8.17e-05)]_14 chrXII:975730-976309 5.24e-16 21_[-1(2.94e-10)]_3_[-2(6.25e-12)]_\ 18 chrXII:1018867-1019399 4.75e-01 100 chrXII:1028125-1028595 9.99e-01 100 chrXII:1051594-1052916 3.62e-01 100 chrXII:1063975-1065357 1.18e-01 100 chrXIII:5313-5736 1.68e-06 69_[+3(7.02e-10)]_11 chrXIII:23717-25995 4.47e-01 100 chrXIII:91606-92098 1.18e-01 100 chrXIII:122853-124720 2.94e-01 100 chrXIII:131133-132225 5.26e-01 100 chrXIII:145804-146525 2.06e-01 100 chrXIII:162699-164317 2.20e-01 100 chrXIII:168529-169119 8.18e-03 26_[+2(7.98e-05)]_45 chrXIII:183702-184200 3.69e-16 5_[-1(1.61e-11)]_14_[+3(2.16e-10)]_\ 32 chrXIII:195914-196443 1.85e-09 22_[+3(1.76e-11)]_58 chrXIII:222582-224430 6.15e-01 100 chrXIII:225324-226967 4.07e-02 56_[-1(7.10e-05)]_15 chrXIII:259005-259569 9.20e-01 100 chrXIII:267775-268822 9.89e-01 100 chrXIII:289480-291378 7.29e-01 100 chrXIII:296710-299566 6.23e-01 100 chrXIII:320931-321832 9.22e-01 100 chrXIII:352064-352472 1.10e-08 67_[+2(3.81e-10)]_4 chrXIII:362842-363348 9.42e-06 54_[+1(4.71e-08)]_17 chrXIII:372163-372773 1.99e-13 35_[-1(4.35e-10)]_3_[-2(5.16e-11)]_\ 4 chrXIII:378846-379650 4.46e-01 100 chrXIII:420327-421365 8.55e-01 100 chrXIII:462761-463943 8.00e-01 100 chrXIII:480403-480925 2.20e-14 15_[-1(5.16e-13)]_2_[-2(6.23e-09)]_\ 25 chrXIII:499053-501823 1.05e-01 100 chrXIII:504629-505381 4.97e-02 100 chrXIII:550836-553198 7.34e-01 100 chrXIII:572627-573495 9.36e-01 100 chrXIII:586345-586877 9.79e-01 100 chrXIII:650735-651726 8.21e-01 100 chrXIII:651949-652940 8.33e-01 100 chrXIII:731698-733542 3.02e-01 100 chrXIII:747717-748329 3.31e-01 100 chrXIII:753603-754800 2.03e-01 100 chrXIII:761243-763190 3.98e-01 100 chrXIII:807908-808609 1.10e-06 45_[-1(3.58e-10)]_26 chrXIII:837670-838684 4.66e-01 100 chrXIII:887394-888151 1.74e-01 100 chrXIII:923380-924382 2.15e-01 100 chrXIV:6502-7142 4.84e-02 100 chrXIV:23876-25841 3.78e-01 100 chrXIV:61572-64705 8.48e-02 100 chrXIV:88860-90140 1.50e-01 100 chrXIV:96005-96658 3.60e-05 11_[+3(1.20e-07)]_69 chrXIV:102408-103079 5.24e-16 27_[+2(6.25e-12)]_3_[+1(2.94e-10)]_\ 12 chrXIV:104593-105148 2.62e-06 20_[+1(1.77e-10)]_51 chrXIV:173857-174661 2.59e-02 100 chrXIV:229438-230911 3.37e-01 100 chrXIV:241352-241748 4.31e-02 62_[+3(8.53e-05)]_18 chrXIV:302342-302691 9.67e-02 100 chrXIV:302994-303704 4.38e-02 100 chrXIV:330506-332557 4.95e-01 100 chrXIV:374626-375197 8.69e-15 12_[+2(1.23e-10)]_20_[+1(1.30e-09)]_\ 10 chrXIV:442818-444172 7.56e-01 100 chrXIV:444429-444856 9.75e-01 100 chrXIV:493686-495612 1.09e-01 100 chrXIV:499009-499780 2.16e-04 80_[-3(2.82e-07)] chrXIV:499972-502062 5.72e-01 100 chrXIV:546936-547374 2.71e-08 55_[+1(5.99e-11)]_16 chrXIV:560173-561191 7.64e-07 69_[-1(1.77e-10)]_2 chrXIV:567837-568683 9.91e-01 100 chrXIV:569607-570157 5.61e-09 43_[-1(1.14e-12)]_28 chrXIV:575049-575859 6.78e-01 100 chrXIV:585370-586535 9.44e-01 100 chrXIV:602115-602577 6.22e-19 21_[+2(2.23e-13)]_3_[+1(1.14e-12)]_\ 18 chrXIV:613219-613730 8.19e-01 100 chrXIV:631721-632150 2.76e-06 12_[+3(2.67e-09)]_68 chrXIV:632359-632896 5.24e-16 26_[+2(6.25e-12)]_3_[+1(2.94e-10)]_\ 13 chrXIV:715516-716669 8.98e-01 100 chrXIV:725754-726439 9.09e-01 100 chrXIV:783348-784325 2.08e-05 37_[+2(5.54e-05)]_14_[-3(3.59e-07)] chrXV:6-1042 3.92e-01 100 chrXV:33131-33785 5.69e-01 100 chrXV:79093-80121 9.74e-01 100 chrXV:92075-94888 5.22e-01 100 chrXV:109571-111279 6.47e-01 100 chrXV:113361-114121 8.78e-01 100 chrXV:159321-160737 3.62e-01 100 chrXV:161083-161661 7.08e-01 100 chrXV:167730-168473 7.41e-01 100 chrXV:216252-216681 1.70e-02 100 chrXV:226406-226945 1.02e-08 36_[+3(2.16e-10)]_44 chrXV:227962-228612 9.99e-01 100 chrXV:253489-254340 6.07e-02 100 chrXV:274489-275018 4.40e-03 33_[+1(4.89e-05)]_38 chrXV:281530-282591 1.25e-01 100 chrXV:287944-288437 5.58e-02 56_[+2(7.98e-05)]_15 chrXV:300820-301480 1.55e-08 62_[+1(5.99e-11)]_9 chrXV:339764-340677 5.79e-01 100 chrXV:353803-354891 7.38e-01 100 chrXV:438370-439070 2.82e-07 32_[+1(3.35e-11)]_39 chrXV:444909-446145 2.10e-01 100 chrXV:464186-464687 1.85e-09 63_[-3(1.76e-11)]_17 chrXV:487175-487730 2.66e-09 41_[+2(6.25e-12)]_30 chrXV:505072-505515 1.59e-01 100 chrXV:571378-572259 9.98e-01 100 chrXV:594119-594914 8.80e-01 100 chrXV:619632-624684 2.35e-01 100 chrXV:663453-664356 9.83e-02 100 chrXV:677956-679221 9.96e-01 100 chrXV:709952-710534 4.52e-09 8_[-3(2.19e-07)]_15_[+1(2.11e-08)]_\ 28 chrXV:728961-730197 9.91e-01 100 chrXV:779687-780898 7.06e-01 100 chrXV:832299-832849 6.93e-01 100 chrXV:842428-843284 4.85e-01 100 chrXV:853989-854439 3.20e-17 31_[-1(1.82e-11)]_2_[-2(6.66e-11)]_\ 9 chrXV:866566-868427 2.62e-01 100 chrXV:900033-901690 6.50e-01 100 chrXV:968129-968410 5.37e-04 41_[-3(7.75e-07)]_39 chrXV:976142-977328 3.15e-01 100 chrXV:978832-979130 1.72e-02 100 chrXV:979813-981042 3.95e-01 100 chrXV:1003791-1005325 7.51e-01 100 chrXV:1025726-1026627 9.24e-01 100 chrXV:1027290-1029670 5.74e-01 100 chrXVI:55783-56555 2.33e-05 58_[-1(2.35e-09)]_13 chrXVI:76167-76724 3.48e-02 100 chrXVI:172741-174126 7.28e-01 100 chrXVI:188615-189019 5.83e-01 100 chrXVI:209905-210528 1.05e-09 33_[-1(6.07e-13)]_38 chrXVI:280636-282778 3.83e-01 100 chrXVI:302590-303254 7.17e-01 100 chrXVI:338705-339162 1.04e-04 16_[+3(2.19e-07)]_64 chrXVI:378674-379038 2.50e-01 100 chrXVI:404548-405781 6.56e-03 22_[+3(5.93e-05)]_58 chrXVI:406204-407859 8.09e-01 100 chrXVI:433444-434397 4.21e-06 54_[+2(1.05e-07)]_17 chrXVI:435636-436583 9.54e-01 100 chrXVI:515149-517033 5.43e-01 100 chrXVI:520155-520820 6.00e-03 18_[-1(9.92e-05)]_53 chrXVI:559990-560983 9.91e-01 100 chrXVI:571561-573072 3.69e-16 2_[-3(2.16e-10)]_14_[+1(1.61e-11)]_\ 35 chrXVI:581654-582469 3.25e-05 55_[+2(6.23e-09)]_16 chrXVI:622125-622855 2.96e-02 69_[+2(9.67e-05)]_2 chrXVI:653754-655033 5.00e-01 100 chrXVI:689083-690438 8.32e-01 100 chrXVI:699915-700677 1.63e-01 100 chrXVI:718451-719459 7.14e-01 100 chrXVI:731690-732337 4.23e-02 100 chrXVI:743729-744700 6.17e-01 100 chrXVI:768498-769513 7.72e-01 100 chrXVI:775656-776216 7.56e-01 100 chrXVI:794383-796081 6.85e-01 100 chrXVI:810390-810945 2.08e-09 63_[+2(6.25e-12)]_8 chrXVI:818768-819958 9.48e-01 100 chrXVI:856461-857177 8.99e-01 100 chrXVI:860037-860594 6.95e-01 100 chrXVI:866445-866763 1.82e-03 26_[-3(7.75e-07)]_54 chrXVI:880067-880570 1.06e-18 35_[-1(1.14e-12)]_3_[-2(2.23e-13)]_\ 4 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************