******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= a549_max_memeout/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr16:58548677-58548777 1.0000 100 chr1:220959824-220959924 1.0000 100 chr6:1477560-1477660 1.0000 100 chr4:57940984-57941084 1.0000 100 chr8:18812296-18812396 1.0000 100 chr19:49140308-49140408 1.0000 100 chr20:3800383-3800483 1.0000 100 chr2:72594737-72594837 1.0000 100 chr18:35158801-35158901 1.0000 100 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chr1:33378442-33378542 1.0000 100 chr7:142984852-142984952 1.0000 100 chr13:111358032-11135813 1.0000 100 chr16:84538082-84538182 1.0000 100 chr20:33124814-33124914 1.0000 100 chr1:155196424-155196524 1.0000 100 chr8:1771280-1771380 1.0000 100 chr20:33900140-33900240 1.0000 100 chr2:75072638-75072738 1.0000 100 chr16:3095622-3095722 1.0000 100 chr3:57947719-57947819 1.0000 100 chr19:46144522-46144622 1.0000 100 chr19:19477705-19477805 1.0000 100 chr6:86070764-86070864 1.0000 100 chr1:72748386-72748486 1.0000 100 chr2:74618849-74618949 1.0000 100 chr19:41829518-41829618 1.0000 100 chr22:38614429-38614529 1.0000 100 chr6:83073097-83073197 1.0000 100 chr16:764127-764227 1.0000 100 chr12:6476893-6476993 1.0000 100 chr2:161077917-161078017 1.0000 100 chr20:43538573-43538673 1.0000 100 chr1:846271-846371 1.0000 100 chr17:55727559-55727659 1.0000 100 chr16:67207820-67207920 1.0000 100 chr17:69434740-69434840 1.0000 100 chr19:12551602-12551702 1.0000 100 chr12:54262397-54262497 1.0000 100 chr9:75609630-75609730 1.0000 100 chr1:226270663-226270763 1.0000 100 chr12:53613046-53613146 1.0000 100 chr8:103740721-103740821 1.0000 100 chr12:54164034-54164134 1.0000 100 chr22:45080658-45080758 1.0000 100 chr4:90050426-90050526 1.0000 100 chr8:1703755-1703855 1.0000 100 chr20:18117972-18118072 1.0000 100 chr7:37960002-37960102 1.0000 100 chr5:81460494-81460594 1.0000 100 chr16:31469265-31469365 1.0000 100 chr20:19796159-19796259 1.0000 100 chr1:22740675-22740775 1.0000 100 chr12:40498731-40498831 1.0000 100 chr1:185125737-185125837 1.0000 100 chr14:104346341-10434644 1.0000 100 chr1:1290803-1290903 1.0000 100 chr3:122101730-122101830 1.0000 100 chr5:177018903-177019003 1.0000 100 chr5:119799745-119799845 1.0000 100 chr8:22431903-22432003 1.0000 100 chr11:63684500-63684600 1.0000 100 chrX:152066064-152066164 1.0000 100 chr4:75719764-75719864 1.0000 100 chr1:65891264-65891364 1.0000 100 chr11:66335861-66335961 1.0000 100 chr19:56146161-56146261 1.0000 100 chr6:140364432-140364532 1.0000 100 chr10:38264831-38264931 1.0000 100 chr2:20208602-20208702 1.0000 100 chr6:135501665-135501765 1.0000 100 chr18:11688863-11688963 1.0000 100 chr19:36193051-36193151 1.0000 100 chr12:94853055-94853155 1.0000 100 chr17:2858187-2858287 1.0000 100 chr10:74135458-74135558 1.0000 100 chr16:28223090-28223190 1.0000 100 chr14:75725266-75725366 1.0000 100 chr5:130500023-130500123 1.0000 100 chr5:5351451-5351551 1.0000 100 chr21:18985013-18985113 1.0000 100 chr3:115502697-115502797 1.0000 100 chr6:27573243-27573343 1.0000 100 chr6:106773143-106773243 1.0000 100 chr11:116942065-11694216 1.0000 100 chr10:93169229-93169329 1.0000 100 chr17:27966292-27966392 1.0000 100 chr2:225015893-225015993 1.0000 100 chr3:52080306-52080406 1.0000 100 chr2:239198740-239198840 1.0000 100 chr1:55972448-55972548 1.0000 100 chr15:72040572-72040672 1.0000 100 chr3:170075057-170075157 1.0000 100 chr2:71758660-71758760 1.0000 100 chr4:120001990-120002090 1.0000 100 chr5:172196955-172197055 1.0000 100 chr15:99091166-99091266 1.0000 100 chr16:46864455-46864555 1.0000 100 chr17:46323985-46324085 1.0000 100 chr11:3663328-3663428 1.0000 100 chr15:27931657-27931757 1.0000 100 chr20:62313210-62313310 1.0000 100 chr4:15151306-15151406 1.0000 100 chr16:711000-711100 1.0000 100 chr1:157016069-157016169 1.0000 100 chr2:11623156-11623256 1.0000 100 chr10:47074154-47074254 1.0000 100 chrX:48769133-48769233 1.0000 100 chr19:44555669-44555769 1.0000 100 chr16:2059745-2059845 1.0000 100 chr5:137827256-137827356 1.0000 100 chr22:18111403-18111503 1.0000 100 chr2:36608116-36608216 1.0000 100 chr2:47194210-47194310 1.0000 100 chr12:116818741-11681884 1.0000 100 chr11:75287512-75287612 1.0000 100 chr18:44496867-44496967 1.0000 100 chr6:34164099-34164199 1.0000 100 chr12:47473550-47473650 1.0000 100 chr6:27840831-27840931 1.0000 100 chr1:87793751-87793851 1.0000 100 chr13:99852364-99852464 1.0000 100 chr10:3509320-3509420 1.0000 100 chr9:138818472-138818572 1.0000 100 chr9:137516510-137516610 1.0000 100 chr6:3023390-3023490 1.0000 100 chr1:8761918-8762018 1.0000 100 chr17:44337842-44337942 1.0000 100 chr3:70048622-70048722 1.0000 100 chr12:47426501-47426601 1.0000 100 chr11:15096077-15096177 1.0000 100 chr19:13273414-13273514 1.0000 100 chr7:95128901-95129001 1.0000 100 chr18:74534722-74534822 1.0000 100 chrX:20393020-20393120 1.0000 100 chr17:61040708-61040808 1.0000 100 chr17:68164886-68164986 1.0000 100 chr8:1694159-1694259 1.0000 100 chr10:2992008-2992108 1.0000 100 chr9:118994514-118994614 1.0000 100 chr17:55520501-55520601 1.0000 100 chr10:80827073-80827173 1.0000 100 chr15:66789341-66789441 1.0000 100 chr7:30325262-30325362 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme a549_max_memeout/seqs-sampled -oc a549_max_memeout/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile a549_max_memeout/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.208 C 0.292 G 0.292 T 0.208 Background letter frequencies (from a549_max_memeout/background): A 0.207 C 0.293 G 0.293 T 0.207 ******************************************************************************** ******************************************************************************** MOTIF WHHTNWTCTSAWAADAAAAHWAWDAAMAW MEME-1 width = 29 sites = 103 llr = 1103 E-value = 4.3e-056 ******************************************************************************** -------------------------------------------------------------------------------- Motif WHHTNWTCTSAWAADAAAAHWAWDAAMAW MEME-1 Description -------------------------------------------------------------------------------- Simplified A 53332431326467546574455365484 pos.-specific C 243121:5:41222:222:2121111421 probability G :11:22:2:3121:221::11212222:1 matrix T 323632727123123212333:4411:14 bits 2.3 2.0 1.8 1.6 Relative 1.4 * * Entropy 1.1 * * * * (15.4 bits) 0.9 * * * * * * 0.7 * * * * ** *** * * 0.5 * * * * * *** *** *** ***** 0.2 **** **** ******************* 0.0 ----------------------------- Multilevel ACCTTATCTCAAAAAAAAAAAAATAAAAA consensus TATACTATAG TC TG TTTTGTA GC T sequence A A G C C C G G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHHTNWTCTSAWAADAAAAHWAWDAAMAW MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chr22:18632384-18632484 + 9 1.19e-12 agaatgag actccgtctcaaaaaaaaaaaaaaaaaaa aaaaGCGAGG chr19:1672246-1672346 - 31 4.96e-12 ACAGAGCGAG ACTCCGTCTCAAAAAAATAAAAATAAAAT AAAAATTAAA chr3:128949408-128949508 + 66 1.52e-11 agcaagactg actcaatttaaaaaaaaaaagataaaaat ggtgca chr8:132868695-132868795 + 10 1.19e-10 aagagcaaa actctgtctcaccaaaaaaaaaaaaacaa aaaacattgt chrX:148576582-148576682 - 11 2.57e-10 GACCTGACAA CCGACATTTCTTAAAAAAAAAAAAAAAAA GCACACCAGG chr5:43020169-43020269 - 54 8.08e-09 ATGCACAAAA ATTAGTAGTCAAAAGAAAAACGATAACAT TTTAGAGATT chr6:12365493-12365593 + 70 1.50e-08 CATCTCTGAC TACTGTTGTTAGAAAACTATAAATGACAT AA chr16:19009965-19010065 - 28 2.35e-08 ACAGAGAGAG ACACTGTCTCAAAATAAATAAATACAGCA TAGAGGGGCC chr2:201165425-201165525 + 60 3.16e-08 CTTCCATCTT TTTACTTTTTAAAAAATTATAATGATAAA GAAGCGCACA chr10:43915718-43915818 - 20 3.65e-08 CATGGCGAGA CCCACGTCTCTACTAAAAATACAAAAAAA TGTAGCCGGG chr11:75945748-75945848 + 14 4.87e-08 AAGTTACGCG TGCTAAACAGTTAAAAAAATTAAGAAAAG Aggggctcgt chr12:95711793-95711893 + 29 4.87e-08 ACTCCCTGAT TTGTTCTCTCAAACAAAATATATTAGCCT GTGGCGACTA chr7:116346502-116346602 + 4 4.87e-08 atg ttcttatctcctcagtctaaaaagaaaaa tggggaccca chr12:32687011-32687111 - 14 5.61e-08 GCACAGAGAG ACTTCTATTTATCAAAGTAAAGTAAACAA CTGAGGCACA chr5:81460494-81460594 - 7 6.46e-08 AGCTAATTGA TAAACATTTCTTAAAATAATTATTAGCTT TTGGGG chr4:125561218-125561318 + 70 1.28e-07 GATGGGACCT ACTTGCATTCAGAAAAAAATGACTAAAAG GG chr9:117373047-117373147 + 33 1.67e-07 caaagaggtt aaataatttaccaaagacgataataagaa gtggagagac chr12:87054597-87054697 + 20 1.91e-07 TCAGGAAGCA ACATCATCTCAATAAATCAAGAGTGACAT CTGCATGGTG chr20:52417413-52417513 - 32 2.81e-07 GACTTCGAGC TTCTTATCAGAAAAACACTTTGATGACAG CGCTTAGTGC chr11:116942065-11694216 - 40 4.11e-07 ACAGAGCGAG ACCCTGTCTTACAAAACAAAACAACAACT CTTGGAATTT chr10:29448962-29449062 - 24 4.11e-07 ACTGGTTTGC CTTTGATCTCAACATAAAAAACTCAGGCT CATTTTAAAC chr6:17352663-17352763 - 69 4.66e-07 ACC ACCATCTCTGGAAAAAGTTTAAATAAATA AAATTAGCTG chr2:48333734-48333834 - 13 5.95e-07 TGGGTAGATA AAATGATTTTAAATGATTACACATGAAAC CGAGGGCAAC chr1:225696219-225696319 - 7 5.95e-07 AGTGAGTCAG CCCAGATTAGAAAAACAATTCAAGCACAA TAGACA chr9:27436232-27436332 - 18 5.95e-07 GACCTTGTCC TCATGAACTTAAAAGCAAATAGTAGAGTA AGACCTACAG chr9:99374560-99374660 - 63 7.58e-07 CTGCCACAG ATTTGTTGTGAGAATGAAATGAAGGGGAT GCATATGAAG chr12:123626143-12362624 + 50 8.54e-07 GGGGAGGAAT AATTGAAGTAAAATGAAAAATGGGTGAAA TCAGGTACTA chr3:67022398-67022498 + 42 9.61e-07 ATCACATGTC AAAATATAACCCCAAATTAATATAAGAAA CACGCTGGGG chr1:42384148-42384248 + 12 1.08e-06 CACCCTCTGT TATTCCTCTGAATAAATATAAATCACGAT CAGAAACCCA chr4:78842952-78843052 - 39 1.21e-06 TGGAAAACAC AACCACTCACCCAAGAAAAATGTACACAT GCACGTACAC chr12:46825220-46825320 - 56 1.21e-06 TGTAGGTTCA TCTTAATCTCCTCAAAATACTCTTGGCCT TTTGCCCAAA chr6:1477560-1477660 - 26 1.21e-06 TAAGGGGAGC ACTTAATCTTTACAGTATTTTGAGGAGAA ATCCAACTTC chr12:47426501-47426601 + 45 1.36e-06 AGCAGAAATT ACATAGTAAAGAAATCCAATACATAAGAA ATAGTGAACT chr5:82872886-82872986 + 60 1.36e-06 tcgtgagttc ctcaaatcttatcatgaattccttaaact gttgacatac chr12:124615309-12461540 - 65 1.53e-06 CTTTGCT TCCTTCTCACGGATTCAATCTGAAAACAA ACAGTGCGAG chr2:161417726-161417826 - 72 1.53e-06 . CCCAGGTCACAGCTAGCAAATGATAAAAT CAGGATTTGA chr12:63187545-63187645 - 58 1.53e-06 ATGCAGAATC TGATTATTTGTGACTGACACTATTAGCAA TGTGCTCAGA chr2:239198740-239198840 + 17 1.92e-06 CCGCCCCCTC TCCCTAACACATACACACACAAATGCCAA GCAAACCCAG chr6:27573243-27573343 + 8 1.92e-06 CTTTCGG TACAAATCTGGTAGGGAAAAACAAAAGAT CAGGCTgtgt chr1:209562586-209562686 + 41 1.92e-06 AACCCAGGGT TAATTTATTCAGCAATCATTAAGAAAGCA AGTTCCTACT chr10:2992008-2992108 - 6 2.14e-06 TCAGAGTCAC AATTAGACAGTGATTCACATTATGTAAAA GATTC chr2:20208602-20208702 - 3 2.40e-06 TGGGTTTAAT TCCTTTTGACTTAACTAAATGCATGACAT AC chr17:57833543-57833643 - 29 2.40e-06 AGTTGTTTGG ACAACATCTGTAATGTCAATTCATAGCCT AATCCATCAT chr17:61818648-61818748 - 47 2.67e-06 AAGTCCTACC ACATGAAATGAGAAAAACACAATTCTCAG GAACAGCCAA chr8:107058210-107058310 + 4 2.67e-06 CTA CATTTTACTCATCATAAATCAGGTTTGAT TGCTCTCTTT chr1:225839704-225839804 - 48 2.67e-06 TGCCTCCGAA CTCTCGTGTTTAATTAAAAAAGGAAGAAA AGTTTGAAAG chr1:203527409-203527509 + 61 2.67e-06 tgcattggct tatttaactaaaaagcacatgagtcagct ggctccaggc chr9:75609630-75609730 - 32 2.98e-06 TGGCATGGCT CATAGCACTCCAAAATAATTACAGTAGAA ACATCAAAGA chr3:196943144-196943244 + 23 2.98e-06 tgagagtgag tcatattcacagatatgatttattacgac gaaaggctac chr2:143621115-143621215 + 56 2.98e-06 TAAGCTTTTC CTATGATCTCTAGCTGAAAATGTAAACAC AGTCTTTTTT chr20:52486046-52486146 + 5 2.98e-06 AACT TAAAATAGACAAAAGGAAAGGGAAATAAT GCATCAAGGG chr2:44108831-44108931 - 33 3.32e-06 AAGCCATGCT TTCAATACTGACAAATAAACAAATCTCTA CCCTTTCGCA chrX:20393020-20393120 - 47 3.70e-06 TTGACTTTCC AGATCATCAGATAATGAATTGAGTCACCT CTATGTGCCA chr18:12640632-12640732 - 28 4.12e-06 TTAAAGTCAA ATCTGAACTCATCATACTATCCTTACAAG CCTGTGTGAT chr3:97483029-97483129 - 24 4.58e-06 CGCGCCGAGG AACTATACATTGAAGAAAAATGTGTGCAC AGGTGGCAGG chrX:9199443-9199543 + 65 4.58e-06 CTCCAACATT CATTTCTAAACAAAAGCCACAAAGAACAA ACATCTC chr16:69510962-69511062 - 65 5.64e-06 AAACCTC AACTCAAATGGCTTAAACAACAAGAAAAT TTATGATCTC chr17:57862707-57862807 + 56 5.64e-06 agcctgacca acatggtgaaaccttgtaaaaatacaaaa ttttttgtac chr1:33378442-33378542 + 33 6.25e-06 TCAGCAGTTC TCCACATGTGATCTGCAAAGAATAAAGCA TTACATcagc chr3:152048942-152049042 - 69 6.25e-06 ACT TTATGCTTTAAATAAAACTGGCTAAAGAA AATCTACAAG chr4:123795004-123795104 - 27 6.25e-06 TAAACATAAT TCATTTACTCATTAACCTTTTGTAGACCT CAACTATTCC chr12:54164034-54164134 - 46 8.47e-06 TGAAACCACA ACCTTGACTCATGTTAGTATGGTTATAAA AAGTACATAC chr17:48715676-48715776 - 61 8.47e-06 GGACACTGTC TTCATTTGTGAGTCAAAATACATTGGCAT AGGAGCCTTG chr19:2507088-2507188 + 53 9.36e-06 agtccatgtt tattcatctgcacaatcaatgcgtagaac catagccctt chr6:111912284-111912384 + 70 9.36e-06 AGATACCAGC CATTGATTACGTTTTTCCATAAATGAAAA CT chr5:172192048-172192148 - 33 1.03e-05 AGATTGAAAT AAGACTTTTAATACTGATAATGTGGCAAT GATGGTTGCC chr20:52239933-52240033 - 23 1.14e-05 CCAAAATGGC TACTGCTCTGTAAATAAGAGATAAGAAAA CTCCGCTGGA chr2:101730194-101730294 + 22 1.14e-05 TCAAGACAGC AACTCTTGTGCAATTCCTAAAACAAGCAA CTATCTATTG chr10:13141440-13141540 - 17 1.14e-05 TGAAAAAAGG TTAACATCTAGACATAGTTAACTGAGCAT ACATAGCTTT chr12:30847945-30848045 + 56 1.14e-05 ACTTAAGGAA AATAAATCACACCCTGAAAACACTAGCAC AGGTTGCAAA chr7:26437538-26437638 - 37 1.26e-05 GCCGCTGACA ACTTCATTACCTCCGCATATAAAAATGAC TGCCGGGGAA chr8:28181955-28182055 + 45 1.26e-05 GGGCACAGCC ACGCTGTTTGGAACAAATTCTACAAAAAT GTCTAGAAAG chr6:122012187-122012287 + 27 1.38e-05 TGATTCTGGC ATATCCTCTGAAGATGAAAAATAATCACT GTCTCAGGGT chr7:22757369-22757469 + 41 1.38e-05 AGAAATATGT AACAGAACTGTAATGGAGATGAATCACAA GAAGGACGCA chr2:225015893-225015993 - 61 1.52e-05 GACATTGAGA AAGAGATGTAGTGTAAACAAAATGACAAA TCCCTGCCTT chr17:69434740-69434840 - 5 1.67e-05 ACACGCAGCT TAACAATCACAAACAACAGCACAGTTAAT GGGG chr15:39566043-39566143 + 45 1.67e-05 ACGACCTCAG AAGTATTTACAGACTGCAATGGAGACCAT GATATAATTC chr2:201170638-201170738 - 7 1.67e-05 ACCGAAACTC CCCTTGTTAATGAAAGATTTTGTCACAAT CCGCAC chr15:27931657-27931757 - 24 1.84e-05 TTTTCTGAAA ATCAACTCACAAAAGACAGATTAGTAGAA GCAAAGATCT chr5:5351451-5351551 + 52 1.84e-05 gcgtcagttc cgtctatgttataaaacctccatgaaaac cgctaaatga chr9:97567839-97567939 + 18 2.02e-05 TTTCTTAAGT ACCTCAATTTGCAAATAAACGGTATGCAC GTACATGCCC chr7:68012866-68012966 + 37 2.02e-05 ATAAACAATG TGCTCGTGTTATAAGTAAGACATACACAA TTGCGAAATT chr6:140364432-140364532 - 18 2.21e-05 TTAACTCCCC AACTATAATACTAAGACATTCATTTAATT CTGACTCACA chr12:53613046-53613146 + 32 2.21e-05 CAAGAGTGAA CATACATGTGAGCACGCATATAAAATCAT AGGTGCACAC chr12:125401673-12540177 - 67 2.21e-05 ACCTT TTATGGTTATATAAGCGATGACAAAGCAA GGCAAACCCT chr12:76384034-76384134 + 20 2.21e-05 CTTTGAAGTT ACATTATTTCTTAATCACTCTTCAGCCAT TGGTAAATAC chr6:27840831-27840931 + 41 2.66e-05 TCGCAGCAGT ACTTTATATAGTAATAAATCGGACCTGAT TGGGAACTCT chr1:86315912-86316012 + 25 2.66e-05 aggctctaga taaatatttgttgaacgaataaaCAGATA CCTAAGGAAA chr4:90050426-90050526 + 46 3.18e-05 TGAAAATGCT AGCCTTTGTCAGCAAGATACATAGCACAA AGTCAAGAGC chr5:76081268-76081368 + 24 3.18e-05 AAAGCAGTAT AGTATGACTCACCCAAGAACAATGACAAC CAGCACTGCC chr2:47194210-47194310 + 10 3.48e-05 aatctcctg aactcttttaacatttgcattattgtgca accagtctcc chr1:8761918-8762018 + 23 3.80e-05 TCTGTTCTCA ACTTTTACTCAGTGTCTCAATCTTAAAAC ACAGAGGCAC chr9:88358230-88358330 + 60 3.80e-05 GTGACGTTAC ACCTTATCAAACACCATATATATGTTACT GACCTCAACT chr12:116818741-11681884 + 27 4.52e-05 atccatggct atttccacactacagcaagaaagttgaat agttgccaca chr4:120001990-120002090 - 31 4.52e-05 ACAGAGGTCA CATTTTATTCACTAGTGTACTCCTAACAT CAAACACTGC chr1:22740675-22740775 + 16 5.36e-05 AACACCAGCT CCGTGTTTACACAAGGACTCTCATAATAT TTGCTTTCTG chr16:15968550-15968650 - 72 5.36e-05 . TTCCAAACTCATAATGATATTGACAGGCG GCCTCAATTC chr3:58257914-58258014 + 36 6.34e-05 acagagaaat tacattagtgccaaaaccacagtaggaac agagcccagg chr17:38752639-38752739 - 48 6.88e-05 AGGTAACTGC TAATTCACAAATGAGTACTGTATTGACAC GAGGGCTGCA chr17:46323985-46324085 - 2 8.10e-05 GAAATTCAAG AGGCTGTGTGATAAGTACTGTAAGTACAT A chr17:56468779-56468879 - 29 8.10e-05 TTGCCTGTAA TCGTTAACTCAGCCTGTAAACAGTTCAAA CGACACTGAG chr19:56915570-56915670 - 53 1.11e-04 ACACACGGTT CCTTAATGTCTCACACATTCTCACACACT GTCACACACG chr9:103142166-103142266 + 58 1.89e-04 cacatggcgc acacacacacacacacacacacacacaca gagagagaga -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHHTNWTCTSAWAADAAAAHWAWDAAMAW MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:18632384-18632484 1.2e-12 8_[+1]_63 chr19:1672246-1672346 5e-12 30_[-1]_41 chr3:128949408-128949508 1.5e-11 65_[+1]_6 chr8:132868695-132868795 1.2e-10 9_[+1]_62 chrX:148576582-148576682 2.6e-10 10_[-1]_61 chr5:43020169-43020269 8.1e-09 53_[-1]_18 chr6:12365493-12365593 1.5e-08 69_[+1]_2 chr16:19009965-19010065 2.4e-08 27_[-1]_44 chr2:201165425-201165525 3.2e-08 59_[+1]_12 chr10:43915718-43915818 3.7e-08 19_[-1]_52 chr11:75945748-75945848 4.9e-08 13_[+1]_58 chr12:95711793-95711893 4.9e-08 28_[+1]_43 chr7:116346502-116346602 4.9e-08 3_[+1]_68 chr12:32687011-32687111 5.6e-08 13_[-1]_58 chr5:81460494-81460594 6.5e-08 6_[-1]_65 chr4:125561218-125561318 1.3e-07 69_[+1]_2 chr9:117373047-117373147 1.7e-07 32_[+1]_39 chr12:87054597-87054697 1.9e-07 19_[+1]_52 chr20:52417413-52417513 2.8e-07 31_[-1]_40 chr11:116942065-11694216 4.1e-07 39_[-1]_32 chr10:29448962-29449062 4.1e-07 23_[-1]_48 chr6:17352663-17352763 4.7e-07 68_[-1]_3 chr2:48333734-48333834 6e-07 12_[-1]_59 chr1:225696219-225696319 6e-07 6_[-1]_65 chr9:27436232-27436332 6e-07 17_[-1]_54 chr9:99374560-99374660 7.6e-07 62_[-1]_9 chr12:123626143-12362624 8.5e-07 49_[+1]_22 chr3:67022398-67022498 9.6e-07 41_[+1]_30 chr1:42384148-42384248 1.1e-06 11_[+1]_60 chr4:78842952-78843052 1.2e-06 38_[-1]_33 chr12:46825220-46825320 1.2e-06 55_[-1]_16 chr6:1477560-1477660 1.2e-06 25_[-1]_46 chr12:47426501-47426601 1.4e-06 44_[+1]_27 chr5:82872886-82872986 1.4e-06 59_[+1]_12 chr12:124615309-12461540 1.5e-06 64_[-1]_7 chr2:161417726-161417826 1.5e-06 71_[-1] chr12:63187545-63187645 1.5e-06 57_[-1]_14 chr2:239198740-239198840 1.9e-06 16_[+1]_55 chr6:27573243-27573343 1.9e-06 7_[+1]_64 chr1:209562586-209562686 1.9e-06 40_[+1]_31 chr10:2992008-2992108 2.1e-06 5_[-1]_66 chr2:20208602-20208702 2.4e-06 2_[-1]_69 chr17:57833543-57833643 2.4e-06 28_[-1]_43 chr17:61818648-61818748 2.7e-06 46_[-1]_25 chr8:107058210-107058310 2.7e-06 3_[+1]_68 chr1:225839704-225839804 2.7e-06 47_[-1]_24 chr1:203527409-203527509 2.7e-06 60_[+1]_11 chr9:75609630-75609730 3e-06 31_[-1]_40 chr3:196943144-196943244 3e-06 22_[+1]_49 chr2:143621115-143621215 3e-06 55_[+1]_16 chr20:52486046-52486146 3e-06 4_[+1]_67 chr2:44108831-44108931 3.3e-06 32_[-1]_39 chrX:20393020-20393120 3.7e-06 46_[-1]_25 chr18:12640632-12640732 4.1e-06 27_[-1]_44 chr3:97483029-97483129 4.6e-06 23_[-1]_48 chrX:9199443-9199543 4.6e-06 64_[+1]_7 chr16:69510962-69511062 5.6e-06 64_[-1]_7 chr17:57862707-57862807 5.6e-06 55_[+1]_16 chr1:33378442-33378542 6.2e-06 32_[+1]_39 chr3:152048942-152049042 6.2e-06 68_[-1]_3 chr4:123795004-123795104 6.2e-06 26_[-1]_45 chr12:54164034-54164134 8.5e-06 45_[-1]_26 chr17:48715676-48715776 8.5e-06 60_[-1]_11 chr19:2507088-2507188 9.4e-06 52_[+1]_19 chr6:111912284-111912384 9.4e-06 69_[+1]_2 chr5:172192048-172192148 1e-05 32_[-1]_39 chr20:52239933-52240033 1.1e-05 22_[-1]_49 chr2:101730194-101730294 1.1e-05 21_[+1]_50 chr10:13141440-13141540 1.1e-05 16_[-1]_55 chr12:30847945-30848045 1.1e-05 55_[+1]_16 chr7:26437538-26437638 1.3e-05 36_[-1]_35 chr8:28181955-28182055 1.3e-05 44_[+1]_27 chr6:122012187-122012287 1.4e-05 26_[+1]_45 chr7:22757369-22757469 1.4e-05 40_[+1]_31 chr2:225015893-225015993 1.5e-05 60_[-1]_11 chr17:69434740-69434840 1.7e-05 4_[-1]_67 chr15:39566043-39566143 1.7e-05 44_[+1]_27 chr2:201170638-201170738 1.7e-05 6_[-1]_65 chr15:27931657-27931757 1.8e-05 23_[-1]_48 chr5:5351451-5351551 1.8e-05 51_[+1]_20 chr9:97567839-97567939 2e-05 17_[+1]_54 chr7:68012866-68012966 2e-05 36_[+1]_35 chr6:140364432-140364532 2.2e-05 17_[-1]_54 chr12:53613046-53613146 2.2e-05 31_[+1]_40 chr12:125401673-12540177 2.2e-05 66_[-1]_5 chr12:76384034-76384134 2.2e-05 19_[+1]_52 chr6:27840831-27840931 2.7e-05 40_[+1]_31 chr1:86315912-86316012 2.7e-05 24_[+1]_47 chr4:90050426-90050526 3.2e-05 45_[+1]_26 chr5:76081268-76081368 3.2e-05 23_[+1]_48 chr2:47194210-47194310 3.5e-05 9_[+1]_62 chr1:8761918-8762018 3.8e-05 22_[+1]_49 chr9:88358230-88358330 3.8e-05 59_[+1]_12 chr12:116818741-11681884 4.5e-05 26_[+1]_45 chr4:120001990-120002090 4.5e-05 30_[-1]_41 chr1:22740675-22740775 5.4e-05 15_[+1]_56 chr16:15968550-15968650 5.4e-05 71_[-1] chr3:58257914-58258014 6.3e-05 35_[+1]_36 chr17:38752639-38752739 6.9e-05 47_[-1]_24 chr17:46323985-46324085 8.1e-05 1_[-1]_70 chr17:56468779-56468879 8.1e-05 28_[-1]_43 chr19:56915570-56915670 0.00011 52_[-1]_19 chr9:103142166-103142266 0.00019 57_[+1]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHHTNWTCTSAWAADAAAAHWAWDAAMAW MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WHHTNWTCTSAWAADAAAAHWAWDAAMAW width=29 seqs=103 chr22:18632384-18632484 ( 9) ACTCCGTCTCAAAAAAAAAAAAAAAAAAA 1 chr19:1672246-1672346 ( 31) ACTCCGTCTCAAAAAAATAAAAATAAAAT 1 chr3:128949408-128949508 ( 66) ACTCAATTTAAAAAAAAAAAGATAAAAAT 1 chr8:132868695-132868795 ( 10) ACTCTGTCTCACCAAAAAAAAAAAAACAA 1 chrX:148576582-148576682 ( 11) CCGACATTTCTTAAAAAAAAAAAAAAAAA 1 chr5:43020169-43020269 ( 54) ATTAGTAGTCAAAAGAAAAACGATAACAT 1 chr6:12365493-12365593 ( 70) TACTGTTGTTAGAAAACTATAAATGACAT 1 chr16:19009965-19010065 ( 28) ACACTGTCTCAAAATAAATAAATACAGCA 1 chr2:201165425-201165525 ( 60) TTTACTTTTTAAAAAATTATAATGATAAA 1 chr10:43915718-43915818 ( 20) CCCACGTCTCTACTAAAAATACAAAAAAA 1 chr11:75945748-75945848 ( 14) TGCTAAACAGTTAAAAAAATTAAGAAAAG 1 chr12:95711793-95711893 ( 29) TTGTTCTCTCAAACAAAATATATTAGCCT 1 chr7:116346502-116346602 ( 4) TTCTTATCTCCTCAGTCTAAAAAGAAAAA 1 chr12:32687011-32687111 ( 14) ACTTCTATTTATCAAAGTAAAGTAAACAA 1 chr5:81460494-81460594 ( 7) TAAACATTTCTTAAAATAATTATTAGCTT 1 chr4:125561218-125561318 ( 70) ACTTGCATTCAGAAAAAAATGACTAAAAG 1 chr9:117373047-117373147 ( 33) AAATAATTTACCAAAGACGATAATAAGAA 1 chr12:87054597-87054697 ( 20) ACATCATCTCAATAAATCAAGAGTGACAT 1 chr20:52417413-52417513 ( 32) TTCTTATCAGAAAAACACTTTGATGACAG 1 chr11:116942065-11694216 ( 40) ACCCTGTCTTACAAAACAAAACAACAACT 1 chr10:29448962-29449062 ( 24) CTTTGATCTCAACATAAAAAACTCAGGCT 1 chr6:17352663-17352763 ( 69) ACCATCTCTGGAAAAAGTTTAAATAAATA 1 chr2:48333734-48333834 ( 13) AAATGATTTTAAATGATTACACATGAAAC 1 chr1:225696219-225696319 ( 7) CCCAGATTAGAAAAACAATTCAAGCACAA 1 chr9:27436232-27436332 ( 18) TCATGAACTTAAAAGCAAATAGTAGAGTA 1 chr9:99374560-99374660 ( 63) ATTTGTTGTGAGAATGAAATGAAGGGGAT 1 chr12:123626143-12362624 ( 50) AATTGAAGTAAAATGAAAAATGGGTGAAA 1 chr3:67022398-67022498 ( 42) AAAATATAACCCCAAATTAATATAAGAAA 1 chr1:42384148-42384248 ( 12) TATTCCTCTGAATAAATATAAATCACGAT 1 chr4:78842952-78843052 ( 39) AACCACTCACCCAAGAAAAATGTACACAT 1 chr12:46825220-46825320 ( 56) TCTTAATCTCCTCAAAATACTCTTGGCCT 1 chr6:1477560-1477660 ( 26) ACTTAATCTTTACAGTATTTTGAGGAGAA 1 chr12:47426501-47426601 ( 45) ACATAGTAAAGAAATCCAATACATAAGAA 1 chr5:82872886-82872986 ( 60) CTCAAATCTTATCATGAATTCCTTAAACT 1 chr12:124615309-12461540 ( 65) TCCTTCTCACGGATTCAATCTGAAAACAA 1 chr2:161417726-161417826 ( 72) CCCAGGTCACAGCTAGCAAATGATAAAAT 1 chr12:63187545-63187645 ( 58) TGATTATTTGTGACTGACACTATTAGCAA 1 chr2:239198740-239198840 ( 17) TCCCTAACACATACACACACAAATGCCAA 1 chr6:27573243-27573343 ( 8) TACAAATCTGGTAGGGAAAAACAAAAGAT 1 chr1:209562586-209562686 ( 41) TAATTTATTCAGCAATCATTAAGAAAGCA 1 chr10:2992008-2992108 ( 6) AATTAGACAGTGATTCACATTATGTAAAA 1 chr2:20208602-20208702 ( 3) TCCTTTTGACTTAACTAAATGCATGACAT 1 chr17:57833543-57833643 ( 29) ACAACATCTGTAATGTCAATTCATAGCCT 1 chr17:61818648-61818748 ( 47) ACATGAAATGAGAAAAACACAATTCTCAG 1 chr8:107058210-107058310 ( 4) CATTTTACTCATCATAAATCAGGTTTGAT 1 chr1:225839704-225839804 ( 48) CTCTCGTGTTTAATTAAAAAAGGAAGAAA 1 chr1:203527409-203527509 ( 61) TATTTAACTAAAAAGCACATGAGTCAGCT 1 chr9:75609630-75609730 ( 32) CATAGCACTCCAAAATAATTACAGTAGAA 1 chr3:196943144-196943244 ( 23) TCATATTCACAGATATGATTTATTACGAC 1 chr2:143621115-143621215 ( 56) CTATGATCTCTAGCTGAAAATGTAAACAC 1 chr20:52486046-52486146 ( 5) TAAAATAGACAAAAGGAAAGGGAAATAAT 1 chr2:44108831-44108931 ( 33) TTCAATACTGACAAATAAACAAATCTCTA 1 chrX:20393020-20393120 ( 47) AGATCATCAGATAATGAATTGAGTCACCT 1 chr18:12640632-12640732 ( 28) ATCTGAACTCATCATACTATCCTTACAAG 1 chr3:97483029-97483129 ( 24) AACTATACATTGAAGAAAAATGTGTGCAC 1 chrX:9199443-9199543 ( 65) CATTTCTAAACAAAAGCCACAAAGAACAA 1 chr16:69510962-69511062 ( 65) AACTCAAATGGCTTAAACAACAAGAAAAT 1 chr17:57862707-57862807 ( 56) ACATGGTGAAACCTTGTAAAAATACAAAA 1 chr1:33378442-33378542 ( 33) TCCACATGTGATCTGCAAAGAATAAAGCA 1 chr3:152048942-152049042 ( 69) TTATGCTTTAAATAAAACTGGCTAAAGAA 1 chr4:123795004-123795104 ( 27) TCATTTACTCATTAACCTTTTGTAGACCT 1 chr12:54164034-54164134 ( 46) ACCTTGACTCATGTTAGTATGGTTATAAA 1 chr17:48715676-48715776 ( 61) TTCATTTGTGAGTCAAAATACATTGGCAT 1 chr19:2507088-2507188 ( 53) TATTCATCTGCACAATCAATGCGTAGAAC 1 chr6:111912284-111912384 ( 70) CATTGATTACGTTTTTCCATAAATGAAAA 1 chr5:172192048-172192148 ( 33) AAGACTTTTAATACTGATAATGTGGCAAT 1 chr20:52239933-52240033 ( 23) TACTGCTCTGTAAATAAGAGATAAGAAAA 1 chr2:101730194-101730294 ( 22) AACTCTTGTGCAATTCCTAAAACAAGCAA 1 chr10:13141440-13141540 ( 17) TTAACATCTAGACATAGTTAACTGAGCAT 1 chr12:30847945-30848045 ( 56) AATAAATCACACCCTGAAAACACTAGCAC 1 chr7:26437538-26437638 ( 37) ACTTCATTACCTCCGCATATAAAAATGAC 1 chr8:28181955-28182055 ( 45) ACGCTGTTTGGAACAAATTCTACAAAAAT 1 chr6:122012187-122012287 ( 27) ATATCCTCTGAAGATGAAAAATAATCACT 1 chr7:22757369-22757469 ( 41) AACAGAACTGTAATGGAGATGAATCACAA 1 chr2:225015893-225015993 ( 61) AAGAGATGTAGTGTAAACAAAATGACAAA 1 chr17:69434740-69434840 ( 5) TAACAATCACAAACAACAGCACAGTTAAT 1 chr15:39566043-39566143 ( 45) AAGTATTTACAGACTGCAATGGAGACCAT 1 chr2:201170638-201170738 ( 7) CCCTTGTTAATGAAAGATTTTGTCACAAT 1 chr15:27931657-27931757 ( 24) ATCAACTCACAAAAGACAGATTAGTAGAA 1 chr5:5351451-5351551 ( 52) CGTCTATGTTATAAAACCTCCATGAAAAC 1 chr9:97567839-97567939 ( 18) ACCTCAATTTGCAAATAAACGGTATGCAC 1 chr7:68012866-68012966 ( 37) TGCTCGTGTTATAAGTAAGACATACACAA 1 chr6:140364432-140364532 ( 18) AACTATAATACTAAGACATTCATTTAATT 1 chr12:53613046-53613146 ( 32) CATACATGTGAGCACGCATATAAAATCAT 1 chr12:125401673-12540177 ( 67) TTATGGTTATATAAGCGATGACAAAGCAA 1 chr12:76384034-76384134 ( 20) ACATTATTTCTTAATCACTCTTCAGCCAT 1 chr6:27840831-27840931 ( 41) ACTTTATATAGTAATAAATCGGACCTGAT 1 chr1:86315912-86316012 ( 25) TAAATATTTGTTGAACGAATAAACAGATA 1 chr4:90050426-90050526 ( 46) AGCCTTTGTCAGCAAGATACATAGCACAA 1 chr5:76081268-76081368 ( 24) AGTATGACTCACCCAAGAACAATGACAAC 1 chr2:47194210-47194310 ( 10) AACTCTTTTAACATTTGCATTATTGTGCA 1 chr1:8761918-8762018 ( 23) ACTTTTACTCAGTGTCTCAATCTTAAAAC 1 chr9:88358230-88358330 ( 60) ACCTTATCAAACACCATATATATGTTACT 1 chr12:116818741-11681884 ( 27) ATTTCCACACTACAGCAAGAAAGTTGAAT 1 chr4:120001990-120002090 ( 31) CATTTTATTCACTAGTGTACTCCTAACAT 1 chr1:22740675-22740775 ( 16) CCGTGTTTACACAAGGACTCTCATAATAT 1 chr16:15968550-15968650 ( 72) TTCCAAACTCATAATGATATTGACAGGCG 1 chr3:58257914-58258014 ( 36) TACATTAGTGCCAAAACCACAGTAGGAAC 1 chr17:38752639-38752739 ( 48) TAATTCACAAATGAGTACTGTATTGACAC 1 chr17:46323985-46324085 ( 2) AGGCTGTGTGATAAGTACTGTAAGTACAT 1 chr17:56468779-56468879 ( 29) TCGTTAACTCAGCCTGTAAACAGTTCAAA 1 chr19:56915570-56915670 ( 53) CCTTAATGTCTCACACATTCTCACACACT 1 chr9:103142166-103142266 ( 58) ACACACACACACACACACACACACACACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHHTNWTCTSAWAADAAAAHWAWDAAMAW MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 10.3359 E= 4.3e-056 123 -75 -1333 72 72 41 -192 -9 34 25 -175 54 34 -101 -1333 152 5 -27 -46 67 111 -101 -75 17 59 -1333 -1333 174 -161 78 -67 23 49 -1333 -1333 178 -33 61 -22 -61 152 -133 -146 -17 80 -75 -75 49 159 -33 -233 -124 165 -92 -391 -24 114 -333 -33 44 111 -67 -46 -41 156 -59 -159 -109 139 -46 -391 11 165 -1333 -259 54 87 -46 -211 72 101 -146 -101 67 131 -46 -39 -209 114 -233 -159 91 59 -192 -39 91 142 -122 -67 -61 137 -111 -46 -83 101 33 -52 -441 189 -75 -1333 -183 98 -122 -233 98 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHHTNWTCTSAWAADAAAAHWAWDAAMAW MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 103 E= 4.3e-056 0.485437 0.174757 0.000000 0.339806 0.339806 0.388350 0.077670 0.194175 0.262136 0.349515 0.087379 0.300971 0.262136 0.145631 0.000000 0.592233 0.213592 0.242718 0.213592 0.330097 0.446602 0.145631 0.174757 0.233010 0.310680 0.000000 0.000000 0.689320 0.067961 0.504854 0.184466 0.242718 0.291262 0.000000 0.000000 0.708738 0.165049 0.446602 0.252427 0.135922 0.592233 0.116505 0.106796 0.184466 0.359223 0.174757 0.174757 0.291262 0.621359 0.233010 0.058252 0.087379 0.650485 0.155340 0.019417 0.174757 0.456311 0.029126 0.233010 0.281553 0.446602 0.184466 0.213592 0.155340 0.611650 0.194175 0.097087 0.097087 0.543689 0.213592 0.019417 0.223301 0.650485 0.000000 0.048544 0.300971 0.378641 0.213592 0.067961 0.339806 0.417476 0.106796 0.145631 0.330097 0.514563 0.213592 0.223301 0.048544 0.456311 0.058252 0.097087 0.388350 0.310680 0.077670 0.223301 0.388350 0.553398 0.126214 0.184466 0.135922 0.533981 0.135922 0.213592 0.116505 0.417476 0.368932 0.203883 0.009709 0.766990 0.174757 0.000000 0.058252 0.407767 0.126214 0.058252 0.407767 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHHTNWTCTSAWAADAAAAHWAWDAAMAW MEME-1 regular expression -------------------------------------------------------------------------------- [AT][CA][CTA][TA][TCAG][AT][TA][CT][TA][CG]A[AT][AC]A[ATG][AG]A[ATC][AT][ATC][AT][AGC][AT][TAG]A[AG][ACG]A[AT] -------------------------------------------------------------------------------- Time 265.55 secs. ******************************************************************************** ******************************************************************************** MOTIF CCSCBSCSSCSSCYCCSBCCKCCCSSSCC MEME-2 width = 29 sites = 125 llr = 1254 E-value = 3.1e-057 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCSCBSCSSCSSCYCCSBCCKCCCSSSCC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :11:11:1:11112::11::2:112:1:2 pos.-specific C 77492594564583774489287635476 probability G 124:441242432133332:412244422 matrix T 2:1:2::21112:4:112::31:111:1: bits 2.3 2.0 1.8 1.6 Relative 1.4 * * * Entropy 1.1 * * * (14.5 bits) 0.9 * * ** * 0.7 * * * * ** ** ** * 0.5 ** * ** * ** ** *** **** 0.2 **** ** ******** *** *** **** 0.0 ----------------------------- Multilevel CCGCGCCCCCCCCTCCCCCCGCCCGCCCC consensus C CG GGGGG CGGGGG T G CGG sequence T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCSCBSCSSCSSCYCCSBCCKCCCSSSCC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chr11:119076441-11907654 + 38 3.24e-09 GTTCCGCCGA CCCCGCCCCAGCCTGGCCCCGCCCCGCCC CGGCGTAGGG chr10:93169229-93169329 + 70 3.96e-09 Aggccgccgc cgccgcctggcgctcccgccgcccggccc gA chr13:111358032-11135813 + 37 5.86e-09 CTCAAGAGCA GCAcggccccgccccgccccgcccACGCC CTTGGGGCCA chr18:74534722-74534822 - 8 1.24e-08 ACCCGCCTCC CGCCTCCCGCCTCAGCCGCCGCCCGGCCC AGGAAAG chr16:46864455-46864555 + 38 1.24e-08 GGCCGCCAAG CCACTgccgcccgcccgcgcgcccggccc ccggcACCCA chr1:72748386-72748486 - 11 1.49e-08 GCCTCCTCCC CCGCCGCCGCGCCTCCTCCCTCACTCGCC GGCGCGCTCG chr7:150949024-150949124 - 30 1.49e-08 CTTCCCCGCA TCCCTCCTCCCTCCGCCGCCTCCCCGGCC GCCGCGGAGT chr5:119799745-119799845 - 48 1.78e-08 CGGGCGAGCA GCGCGCCTGCGCCTCCTCCCGCCGCCGCC CGGCGCTCTC chr5:52775411-52775511 - 5 3.56e-08 TTGCTAGGAA CCCCGGCCCCGGCACCTTCCACCCTGGCA GAGC chr17:77787141-77787241 - 1 6.86e-08 GCCGGTGACC CCGCGCCCGCCGCCCCCGCCGCCTCTGTC chr3:170075057-170075157 - 62 8.04e-08 TTCCCGCAGA CGCCGCCGCCGTCTCCGGCCGCCCGGGGG AGAGCGAGGG chr9:126773174-126773274 + 64 1.10e-07 ctccctgcct cccccccacccccgccctccagcctcgcc caccagct chrX:1571455-1571555 + 66 1.28e-07 CTCCGCGAGG CCACGCCCCCGCCCGCCTCCGCGAGGCCA CGCCCA chr5:65220737-65220837 + 1 1.73e-07 . tctctccgctccctccgtcctccctcccc tcgccgtctc chr12:40498731-40498831 + 17 2.32e-07 ACTAGAGTGA CACCCCCTCCCCCCCGACCCTCCCACCTC CCGGGAGAGC chr2:241374484-241374584 - 19 3.55e-07 ATCACGCCTC CCGCGCCCCAATCAGGGGCCTCCCCGCCC CCAGCCGAAA chr18:44496867-44496967 + 28 4.08e-07 GCCCCCTGCC CACCCGCGCGACCGCCTTCCGCCCGCGCC TTCAGTCCGC chr6:158402296-158402396 - 40 4.08e-07 CTTTGCGCCG CCGCTCCCGCCGCGCCAGGCTCCTCCCCG GCCTCCTCCC chr7:152160906-152161006 - 39 4.08e-07 AGTAGTGCGA CCCCGGCCCCCGCAGCTTCCGCCAACCCA GGCTCGCGAG chr15:99091166-99091266 + 11 4.68e-07 TGGGCGGGCG TCGCGGCCCAGGCCCCCGCCTCCTCCGTC CTCCGCGATT chr12:48099328-48099428 + 12 4.68e-07 GTACCCATAA CCGCTACCCCTCCTCCCACCGGCCACCCC AAGGATCTCC chr6:13711695-13711795 - 18 4.68e-07 CGCCTCCGTC CCGCCCCCTCGCCTAGCGCCGCCCGCGCG CAGCGTCTCG chr14:64804593-64804693 + 60 5.36e-07 ccgccccgtc cccctccccgcagaccgccccccctcccc gcagaccgcc chr16:3095622-3095722 - 68 6.12e-07 GGGG TCCCGGCCCGCCCTCCGCCCCGCCAGCTC CAGCTGTGCG chr13:29292516-29292616 - 57 7.97e-07 AGTGACAGCG CCGCGGCAGCCGACCCCGCCTCCTCGGCG GACAGCGATG chr3:46671422-46671522 - 17 7.97e-07 GTTTCAGCGT CGCCCGCACCGCCTCCCTCCGCAGGCCCA GAGCTTCCTG chr5:176883298-176883398 + 64 9.08e-07 GCCCCTAGCA CCGCCCCCCCACCCCGCCCCCGCCTGGCG GGCCTTGG chr21:18985013-18985113 - 53 1.03e-06 CGCGGCGAAG CCCCGCCCCCGGCACCGCCCCTCAGGCGC GCGAGCCGAT chr7:142984852-142984952 - 65 1.03e-06 ACGCACA CTGCGCCTGCGCCTGCGCCCTGCCGCGCC CACACACCAG chr20:35723338-35723438 - 46 1.03e-06 CCTCGCCAGG CCCCACCCCTGCCCCGCCCCTTCCTCGGC CTATGGGGTG chr12:133463517-13346361 + 59 1.17e-06 CGGTGGCTCT Gcccggccccggcccccggccccggcctc agccccgcac chr6:31869273-31869373 - 15 1.17e-06 GAGTCCTAGC CGACGCCGCCGCCGCCGCGCGCGCGGGGC CTGGAACACA chr1:87793751-87793851 + 21 1.33e-06 CTAGAGGCCA GCGCCGCCGCCGCCGCCGCCTCCGAGCCG GGCAGCAACA chr12:14133486-14133586 + 19 1.33e-06 CCATCGCCTC CAGCAGCAGCGCCGCCTCCCACCCCGGGC TTGTGCTGAA chr11:63684500-63684600 + 37 1.50e-06 GCTCGCCCGC TCTCCGCCGCCGCTCGCTCCTCGCGCACA CAATGAAGCT chr15:75287665-75287765 - 54 1.70e-06 GCGCGCGCGC CCGAGGCCGTCTCTGCGCGCGCCCGCGCC GCCACTGCCT chr6:135501665-135501765 + 57 1.92e-06 CAGGAAAAgg cgccgtcgcggcccccggccacccctccc tggccccggg chr1:155058587-155058687 + 63 1.92e-06 CCTCTGGTGG CCACTGCTGGAACCGCAGCCCCCCGCCCC GGTGCCTGC chr9:38068745-38068845 + 20 1.92e-06 GCGCACCTCT CCGCTCCTGCACACGCCACCTCCCGCGGC TGCCCTGGCG chr6:53212601-53212701 + 20 1.92e-06 CCGCCCGCGC CCGCACCCGCACCCCTTTCCCCGCGCCCG AGGAGCCGGG chr2:191744949-191745049 + 36 2.44e-06 CCCACCAATC CCCCGCCCTACTCTCCGCGCACCCAGAGC CGAGAGAAAT chr1:240161166-240161266 + 17 2.44e-06 GCCGCCCTCA CAGCCCCGCGGCCACCGCCGACCCGGGCC GGTCCCCGGG chr12:53886594-53886694 - 2 2.44e-06 CCTTCCCTTT CCCCACCCGGACCACCCCCTTCCGCCGCC G chr20:26189795-26189895 - 67 2.74e-06 CCCAC CCCCAGCGCCCCCTCCTCCGGTCGGCGCC TCGGTGTCCG chr1:41156861-41156961 + 51 2.74e-06 CCTCGCGCGG CCGCTGCTGTAGCTCGGTCCGTCCTGCCC GCCGCCATGT chr2:220024786-220024886 + 45 2.74e-06 CCAGCGGACT GCGCACGCGCGGCCCCGCCCACCCCTCCC CCGGAGGCCT chr1:235666943-235667043 + 19 3.08e-06 TTTCTCCCAC TCGCCCCGCCCTCTCCTCCCGCGTTTCCA CACGCGCCAG chr8:63998353-63998453 + 22 3.08e-06 ATGCCCGCCG CCGCTGCTGCGGCCGCAGCTACCCGGGCA CCCGGGAAAA chr14:93672925-93673025 - 26 3.08e-06 CAAACGGATG TCACTCCTCTCCCTTCTCCCGCCTGCGCC GGACGCGGGC chr17:55727559-55727659 + 60 3.46e-06 AGGAATGACT CACCTGCACCCTCTCCCTCCAGCATCCCC TGGGCCTTGC chr22:42322444-42322544 - 47 3.46e-06 TGCTGGTCCG CCACTGCGTGGCCTGCGGGCTCCTGCGCA CGCCGCGGCC chr3:115502697-115502797 - 11 3.87e-06 ACCTGCGCCC TCCCTCCTGCCCTGCGGCCCGCGCACCCC CCGCCCACCC chr1:157016069-157016169 + 52 4.34e-06 TCCTACCCCC TGCCCGCCCAGCCACCGTGCCCGCGCCCC GTGCCCCTGC chr6:105850645-105850745 + 30 4.34e-06 CTCTGCAGGA Tcgccggccgcgcccgcgccgcccgggcg cACGGAGGAG chr19:12551602-12551702 - 69 4.85e-06 AGC CCGCGGCGTCTGCTCCACCCACCTGCGCT CGGCTCTGGG chr2:28789503-28789603 - 62 4.85e-06 TTCTTTTTGA CACCTCCCCGCCCCCGGCCCCCAAGCCCC GAACCTCGTT chr2:132439895-132439995 - 18 5.41e-06 CCGGTGGGGT CCACGCCCCCGCCACTGACCGCGGAGACC TGTCTCCTAC chr5:54522164-54522264 + 28 6.04e-06 GCTGTCGAAG GCCCGAcggccggccgcgccgcccccgcA CGCCTGCATT chr6:132833798-132833898 + 10 6.04e-06 CTCCACGGC TCCCTCCTACACCTCCGACCGCCGTCACC CACCTACCCC chr3:42696043-42696143 - 4 6.04e-06 CCTAGCAAGA CCTCAGCCTCGCGCGCCGGCGCCCCCACC ACA chr20:18117972-18118072 - 30 6.73e-06 CCCACGCTGG CGGCCGCGGCCTCTCTCTCCCGCCCGCCC GAGGCGCAGA chr19:1652656-1652756 - 20 6.73e-06 CCAGGACCCA CCCCGGCCGCCTCTCGCGGCCTCTCGCTC GCAGAGTCCC chr21:34100055-34100155 + 53 6.73e-06 cctccttctc cCGCAGCCGCCGCCACAGCCGCCGGGAGC GTCACTTCCG chr20:52824153-52824253 + 59 6.73e-06 GAGAGCGGTC CCGCGGCAAGGCCTGCTCGCGCCTGGCGC CCTGAGCGTT chr5:172196955-172197055 + 28 7.49e-06 ATTGCGCCGC TCGCTCCCCCAGCAGCGCCCGCAGGCCTC CAGCGTCCAG chrX:54518814-54518914 - 69 8.32e-06 AGA GGCCACCTCCCCCACTGCCCAGCCGGCCC AGGGGTAGGC chr17:42287740-42287840 + 48 8.32e-06 TGCAGATGTC TCCCGCCTGGGGCTCGCCCCCGCCTGGTC TGCGGCGCTC chr10:38264831-38264931 + 69 9.24e-06 AGGCTCGAGA CCCCGCCTCCCAGGCCCTGCCCGCCCGCA AAA chr1:226270663-226270763 + 53 1.03e-05 GAGCTCGCCA CGCCCACCGGGTCCGCCCCCACGCGGCCG CCTGCACAGG chr12:54389272-54389372 - 52 1.03e-05 GGGCCTGCAT TCCCGCCGGCGCCCCCGCCCTGACGCTCC GCAGCAAGCG chr16:85686026-85686126 - 18 1.03e-05 CCCGGGCCGG CGCCTCCCCTCTCTCCACCCTCCAGGAGA CAGTCAGCGA chr7:37960002-37960102 - 71 1.14e-05 C CCACTGCTGCGGCGCCTGGCACGGGCGCG GGGCTCCCAC chr17:66097169-66097269 + 4 1.14e-05 CGG CCCCGCCTCCCATCTCCCCCTCGCCCCCC CGGAGCCGAC chr3:5163693-5163793 + 5 1.14e-05 GTCG ACGCCGCCGCTCGTCCGTCCTCCCGTCCG TTCTCGCTCC chr11:9594249-9594349 + 72 1.14e-05 GGCGGTGTTc gggcggcgccgggccgggccccccgccgc chr3:39194838-39194938 + 70 1.26e-05 CGGCAGCCCC GCCCCGGAGGCGCCGCCTCCTCCCCCGCC TG chr5:92957029-92957129 + 45 1.26e-05 GGGAAACCAC CCACTCCCGAGACTCGGCGCGCGCGGGGA TTGGTTTCCC chr22:18483781-18483881 - 24 1.26e-05 GGGCCACAAC CCCCGCCCTTCCATGTGCCCGCCCATCCC CCGGCTGCGC chr7:30325262-30325362 + 27 1.39e-05 TCTCCTTCTG CCGGGGCGCCGGGGGCTGCCTCCCGGACC AGCCCGCGTC chr1:228327310-228327410 - 48 1.39e-05 TCCCGCTGCG TCACAGCGCCACGCCGGCCCGCCTCCACA CAGCGCGAAC chr1:28099521-28099621 - 44 1.39e-05 GCGTGCGCAC TAGCCCCGCCCTCACGCGGCGCGCACGCG TCCTCCCCGC chr1:220959824-220959924 - 13 1.39e-05 CGGTCAGGCC CAGCGCGGCAACCCCGAGCCACCCGGGCC GGGATTGCGC chr18:11688863-11688963 + 3 1.54e-05 GC CCCGGCCTGCCGCACCCCCTTCCCGCAGC TGGCGGCCGG chrX:41301095-41301195 - 15 1.87e-05 CCGGGACCTC TGTCTGCTCCCCGCCGCGGCACCCGCACC TACTCGGTGG chr5:87956378-87956478 + 9 1.87e-05 ACGACCCG CCCCTGCCGAGCCCCGCAGCGCGGCGCCG GTGTCCAGCA chr3:57678150-57678250 + 40 1.87e-05 GCGCCTCCCG CCGCCACAAGGGCCGGCGCCTCGCGGCCC TCGGCCCCTG chr10:17242919-17243019 - 22 2.06e-05 AACAGCTCCT GCGCGCCGCCGTGTCCACCCCTCCAGACG CTGACTCCCT chr22:18632384-18632484 - 63 2.06e-05 CCGAGCTTC CCGCGGCTGCCGTTGCAGCCGCGCACCTG CTCCAGACTT chr9:6015291-6015391 - 62 2.27e-05 GGGAGAAGCA CCCCGCCCATCCCCGCCGGCGCCTCGCCT ACGTCACTGC chr12:50134883-50134983 - 71 2.27e-05 A CCCCCGCAGACTCGCCTCCGCCCCACCCC CGCTTCAGCA chr20:43538573-43538673 + 70 2.49e-05 TCTCTCCCGC CGGCCCCATCCTGTCCATCCGCGTGTGCC GC chr2:122512808-122512908 + 65 2.49e-05 GCCTCAGGCA GCGCGGCGGACAGCCCGTCCTCCGGCGCG CCGCGAG chr2:97778748-97778848 + 34 2.49e-05 TGTGGCAACC CCGGATCCCGTCCTCCCGCCTCGCACCCA TCAGCGCGGA chr2:238969017-238969117 + 14 2.74e-05 ACCTGACCCA GCGCAGCCTCGCCTCCCCGCTGGGGGCTC GGCGGCCCTC chr16:31117046-31117146 + 10 2.74e-05 CCACCTCGG TGGCAGCCGCAGCCTCCTCCGCCTGCGGC TCCTGTCCAC chr16:25118122-25118222 + 11 2.74e-05 CTCTCTCGCG TCACTTCCGGCGCGCCGTCCACCCGCCCT CTTGGCCGAC chr16:28223090-28223190 + 3 3.01e-05 CC CACCGCCCGTGCGTCCACGCGGGCCGGCA GCCATCTTGG chr21:26979532-26979632 + 63 3.01e-05 GAACCGTCGC GCGCAAGTCCTTCTCCGCCCTCCTCCCCC GGAAACCGA chr2:131113344-131113444 - 49 3.01e-05 GTACGCAGGG CCAGGGCCGGGGCGCGCCGCTCGCGGACC CCGTGTGCCA chr4:184364931-184365031 - 19 3.01e-05 TTCCCTTTTA TAACCTCGCCGCCGCCGCGCGCCCTCGCG TTCTTCCGGC chr2:239198740-239198840 + 56 3.30e-05 GCAAACCCAG GCCCGGCTGCTGCGCCCTGCACACACCCA AAGGCTCTTT chr5:72143714-72143814 + 71 3.30e-05 AGTATCCTTT CCGAGGCCTGGCCGCCACCCGCGCAGCTc g chr3:149070321-149070421 - 18 3.30e-05 GGCCATGTGG CCCCAGCAGGGACTGGCACCACCGCCCCA CCCCCGGCTC chr19:1205114-1205214 + 48 3.95e-05 ACAGCCGTGG CCTCGTCTCCCCATGCCTGCTTCCCGCCC CCTGCCCGTG chr8:32404983-32405083 - 10 4.73e-05 CGTCGATGGG TCCCACCGCTGGCGGCTCGCGTCCTGGCC TCTGCCCGG chr15:65669206-65669306 + 70 4.73e-05 CCCTCGGTCT CCACGCCAGCCCGCCCCGCTTGCTCCCGC TT chr4:1283013-1283113 + 2 5.16e-05 C AGCCCGCACCCCATCGGCCCGCCCCGGGC CAGGAGCATC chr2:27070683-27070783 - 69 5.16e-05 GAG GCGCCCCCGCCCAGCCCTCCAGCGGTCCA CTGCACCGCG chr1:207818241-207818341 + 42 5.16e-05 CACGGGGTCT CCCGCGCCGCTCATGGCGCCTCCCGTCCG TCTCGAGCGT chr5:130500023-130500123 + 41 6.13e-05 TAACGAGTAA CCGGAGCGCCGGCACGCGCCGGCAGGCCG CCTCGGAGTG chr11:9405731-9405831 - 65 6.13e-05 GCCACCA CCACCACACCACACCGAGGCGCCCCGGCG TGGAAGTCGC chr1:1290803-1290903 - 6 6.68e-05 ACTGGGACCT GCGCGGCCCCGGGGGTGGCCCCGCGCGGC GCCTG chr13:67804239-67804339 - 30 6.68e-05 GGAGACGAGC CGCCTCGGTGACCCCCATCCGCCCGCAGC GGTGGCCCTG chr9:140445608-140445708 + 60 6.68e-05 GCGCGGTTGC CGGCTCCGCCCAGAGGAGCCGCGCCCGGC GGAGGGGTAA chr2:207139321-207139421 - 53 6.68e-05 CAGACCGTCC GAGCGCCACGGCCCCGCTGCCCGCGGAGC CAGAAATAGG chr3:32279461-32279561 - 52 7.90e-05 GCAGGAGAGG GACCGCCCCGCGGAGGCGCCGCGGACGCC CGCCCTCTTC chr4:37455195-37455295 + 12 7.90e-05 CGAGCCCTAG CCCCGCCGCATCCTCGGGGCGTGCAGGTA AAGGGTTACG chr15:99193144-99193244 + 67 8.58e-05 GCTGTGGTTT CAGCGCCAGGGTCTGCGGCGGCGCGGGGA GGGTG chr4:82136705-82136805 + 41 8.58e-05 ACATGTGACC CCGAAGCAGCTCGTCGACGCGCCCCTCCC GGACTCTGGG chr3:49130317-49130417 + 20 1.09e-04 CCAGCGGTAG TggcccgcccgcccccgcccgccgTTGTG TGGGGTGGGC chr14:51134367-51134467 + 52 1.28e-04 GGCCGCCGAA TAACCGCTACCACTACCGCCGCCGCCGCC TACATCCCGT chr6:7313203-7313303 - 62 1.39e-04 GCTCTCCCCA CCTCTCCGCGCTGAGCAGCCACGTCGGCG GCGGTCCCTG chr16:4465914-4466014 - 37 1.88e-04 GAAGACGCGT CCGCCGCCGTGCCCGTCGCCATGAACCGC TTCAGGGTGT chr19:6475729-6475829 - 65 2.35e-04 CCTCGTG CGTCCACGCGTCCTGCGCGCTCCTGTACC CCATGCGCTG chr12:94853055-94853155 + 45 6.10e-04 GTCCCACCCC CCACGCCGACGTCACCCACGCCACCGACG CCGGTTGCTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCSCBSCSSCSSCYCCSBCCKCCCSSSCC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:119076441-11907654 3.2e-09 37_[+2]_34 chr10:93169229-93169329 4e-09 69_[+2]_2 chr13:111358032-11135813 5.9e-09 36_[+2]_35 chr18:74534722-74534822 1.2e-08 7_[-2]_64 chr16:46864455-46864555 1.2e-08 37_[+2]_34 chr1:72748386-72748486 1.5e-08 10_[-2]_61 chr7:150949024-150949124 1.5e-08 29_[-2]_42 chr5:119799745-119799845 1.8e-08 47_[-2]_24 chr5:52775411-52775511 3.6e-08 4_[-2]_67 chr17:77787141-77787241 6.9e-08 [-2]_71 chr3:170075057-170075157 8e-08 61_[-2]_10 chr9:126773174-126773274 1.1e-07 63_[+2]_8 chrX:1571455-1571555 1.3e-07 65_[+2]_6 chr5:65220737-65220837 1.7e-07 [+2]_71 chr12:40498731-40498831 2.3e-07 16_[+2]_55 chr2:241374484-241374584 3.5e-07 18_[-2]_53 chr18:44496867-44496967 4.1e-07 27_[+2]_44 chr6:158402296-158402396 4.1e-07 39_[-2]_32 chr7:152160906-152161006 4.1e-07 38_[-2]_33 chr15:99091166-99091266 4.7e-07 10_[+2]_61 chr12:48099328-48099428 4.7e-07 11_[+2]_60 chr6:13711695-13711795 4.7e-07 17_[-2]_54 chr14:64804593-64804693 5.4e-07 59_[+2]_12 chr16:3095622-3095722 6.1e-07 67_[-2]_4 chr13:29292516-29292616 8e-07 56_[-2]_15 chr3:46671422-46671522 8e-07 16_[-2]_55 chr5:176883298-176883398 9.1e-07 63_[+2]_8 chr21:18985013-18985113 1e-06 52_[-2]_19 chr7:142984852-142984952 1e-06 64_[-2]_7 chr20:35723338-35723438 1e-06 45_[-2]_26 chr12:133463517-13346361 1.2e-06 58_[+2]_13 chr6:31869273-31869373 1.2e-06 14_[-2]_57 chr1:87793751-87793851 1.3e-06 20_[+2]_51 chr12:14133486-14133586 1.3e-06 18_[+2]_53 chr11:63684500-63684600 1.5e-06 36_[+2]_35 chr15:75287665-75287765 1.7e-06 53_[-2]_18 chr6:135501665-135501765 1.9e-06 56_[+2]_15 chr1:155058587-155058687 1.9e-06 62_[+2]_9 chr9:38068745-38068845 1.9e-06 19_[+2]_52 chr6:53212601-53212701 1.9e-06 19_[+2]_52 chr2:191744949-191745049 2.4e-06 35_[+2]_36 chr1:240161166-240161266 2.4e-06 16_[+2]_55 chr12:53886594-53886694 2.4e-06 1_[-2]_70 chr20:26189795-26189895 2.7e-06 66_[-2]_5 chr1:41156861-41156961 2.7e-06 50_[+2]_21 chr2:220024786-220024886 2.7e-06 44_[+2]_27 chr1:235666943-235667043 3.1e-06 18_[+2]_53 chr8:63998353-63998453 3.1e-06 21_[+2]_50 chr14:93672925-93673025 3.1e-06 25_[-2]_46 chr17:55727559-55727659 3.5e-06 59_[+2]_12 chr22:42322444-42322544 3.5e-06 46_[-2]_25 chr3:115502697-115502797 3.9e-06 10_[-2]_61 chr1:157016069-157016169 4.3e-06 51_[+2]_20 chr6:105850645-105850745 4.3e-06 29_[+2]_42 chr19:12551602-12551702 4.8e-06 68_[-2]_3 chr2:28789503-28789603 4.8e-06 61_[-2]_10 chr2:132439895-132439995 5.4e-06 17_[-2]_54 chr5:54522164-54522264 6e-06 27_[+2]_44 chr6:132833798-132833898 6e-06 9_[+2]_62 chr3:42696043-42696143 6e-06 3_[-2]_68 chr20:18117972-18118072 6.7e-06 29_[-2]_42 chr19:1652656-1652756 6.7e-06 19_[-2]_52 chr21:34100055-34100155 6.7e-06 52_[+2]_19 chr20:52824153-52824253 6.7e-06 58_[+2]_13 chr5:172196955-172197055 7.5e-06 27_[+2]_44 chrX:54518814-54518914 8.3e-06 68_[-2]_3 chr17:42287740-42287840 8.3e-06 47_[+2]_24 chr10:38264831-38264931 9.2e-06 68_[+2]_3 chr1:226270663-226270763 1e-05 52_[+2]_19 chr12:54389272-54389372 1e-05 51_[-2]_20 chr16:85686026-85686126 1e-05 17_[-2]_54 chr7:37960002-37960102 1.1e-05 70_[-2]_1 chr17:66097169-66097269 1.1e-05 3_[+2]_68 chr3:5163693-5163793 1.1e-05 4_[+2]_67 chr11:9594249-9594349 1.1e-05 71_[+2] chr3:39194838-39194938 1.3e-05 69_[+2]_2 chr5:92957029-92957129 1.3e-05 44_[+2]_27 chr22:18483781-18483881 1.3e-05 23_[-2]_48 chr7:30325262-30325362 1.4e-05 26_[+2]_45 chr1:228327310-228327410 1.4e-05 47_[-2]_24 chr1:28099521-28099621 1.4e-05 43_[-2]_28 chr1:220959824-220959924 1.4e-05 12_[-2]_59 chr18:11688863-11688963 1.5e-05 2_[+2]_69 chrX:41301095-41301195 1.9e-05 14_[-2]_57 chr5:87956378-87956478 1.9e-05 8_[+2]_63 chr3:57678150-57678250 1.9e-05 39_[+2]_32 chr10:17242919-17243019 2.1e-05 21_[-2]_50 chr22:18632384-18632484 2.1e-05 62_[-2]_9 chr9:6015291-6015391 2.3e-05 61_[-2]_10 chr12:50134883-50134983 2.3e-05 70_[-2]_1 chr20:43538573-43538673 2.5e-05 69_[+2]_2 chr2:122512808-122512908 2.5e-05 64_[+2]_7 chr2:97778748-97778848 2.5e-05 33_[+2]_38 chr2:238969017-238969117 2.7e-05 13_[+2]_58 chr16:31117046-31117146 2.7e-05 9_[+2]_62 chr16:25118122-25118222 2.7e-05 10_[+2]_61 chr16:28223090-28223190 3e-05 2_[+2]_69 chr21:26979532-26979632 3e-05 62_[+2]_9 chr2:131113344-131113444 3e-05 48_[-2]_23 chr4:184364931-184365031 3e-05 18_[-2]_53 chr2:239198740-239198840 3.3e-05 55_[+2]_16 chr5:72143714-72143814 3.3e-05 70_[+2]_1 chr3:149070321-149070421 3.3e-05 17_[-2]_54 chr19:1205114-1205214 4e-05 47_[+2]_24 chr8:32404983-32405083 4.7e-05 9_[-2]_62 chr15:65669206-65669306 4.7e-05 69_[+2]_2 chr4:1283013-1283113 5.2e-05 1_[+2]_70 chr2:27070683-27070783 5.2e-05 68_[-2]_3 chr1:207818241-207818341 5.2e-05 41_[+2]_30 chr5:130500023-130500123 6.1e-05 40_[+2]_31 chr11:9405731-9405831 6.1e-05 64_[-2]_7 chr1:1290803-1290903 6.7e-05 5_[-2]_66 chr13:67804239-67804339 6.7e-05 29_[-2]_42 chr9:140445608-140445708 6.7e-05 59_[+2]_12 chr2:207139321-207139421 6.7e-05 52_[-2]_19 chr3:32279461-32279561 7.9e-05 51_[-2]_20 chr4:37455195-37455295 7.9e-05 11_[+2]_60 chr15:99193144-99193244 8.6e-05 66_[+2]_5 chr4:82136705-82136805 8.6e-05 40_[+2]_31 chr3:49130317-49130417 0.00011 19_[+2]_52 chr14:51134367-51134467 0.00013 51_[+2]_20 chr6:7313203-7313303 0.00014 61_[-2]_10 chr16:4465914-4466014 0.00019 36_[-2]_35 chr19:6475729-6475829 0.00023 64_[-2]_7 chr12:94853055-94853155 0.00061 44_[+2]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCSCBSCSSCSSCYCCSBCCKCCCSSSCC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCSCBSCSSCSSCYCCSBCCKCCCSSSCC width=29 seqs=125 chr11:119076441-11907654 ( 38) CCCCGCCCCAGCCTGGCCCCGCCCCGCCC 1 chr10:93169229-93169329 ( 70) CGCCGCCTGGCGCTCCCGCCGCCCGGCCC 1 chr13:111358032-11135813 ( 37) GCACGGCCCCGCCCCGCCCCGCCCACGCC 1 chr18:74534722-74534822 ( 8) CGCCTCCCGCCTCAGCCGCCGCCCGGCCC 1 chr16:46864455-46864555 ( 38) CCACTGCCGCCCGCCCGCGCGCCCGGCCC 1 chr1:72748386-72748486 ( 11) CCGCCGCCGCGCCTCCTCCCTCACTCGCC 1 chr7:150949024-150949124 ( 30) TCCCTCCTCCCTCCGCCGCCTCCCCGGCC 1 chr5:119799745-119799845 ( 48) GCGCGCCTGCGCCTCCTCCCGCCGCCGCC 1 chr5:52775411-52775511 ( 5) CCCCGGCCCCGGCACCTTCCACCCTGGCA 1 chr17:77787141-77787241 ( 1) CCGCGCCCGCCGCCCCCGCCGCCTCTGTC 1 chr3:170075057-170075157 ( 62) CGCCGCCGCCGTCTCCGGCCGCCCGGGGG 1 chr9:126773174-126773274 ( 64) CCCCCCCACCCCCGCCCTCCAGCCTCGCC 1 chrX:1571455-1571555 ( 66) CCACGCCCCCGCCCGCCTCCGCGAGGCCA 1 chr5:65220737-65220837 ( 1) TCTCTCCGCTCCCTCCGTCCTCCCTCCCC 1 chr12:40498731-40498831 ( 17) CACCCCCTCCCCCCCGACCCTCCCACCTC 1 chr2:241374484-241374584 ( 19) CCGCGCCCCAATCAGGGGCCTCCCCGCCC 1 chr18:44496867-44496967 ( 28) CACCCGCGCGACCGCCTTCCGCCCGCGCC 1 chr6:158402296-158402396 ( 40) CCGCTCCCGCCGCGCCAGGCTCCTCCCCG 1 chr7:152160906-152161006 ( 39) CCCCGGCCCCCGCAGCTTCCGCCAACCCA 1 chr15:99091166-99091266 ( 11) TCGCGGCCCAGGCCCCCGCCTCCTCCGTC 1 chr12:48099328-48099428 ( 12) CCGCTACCCCTCCTCCCACCGGCCACCCC 1 chr6:13711695-13711795 ( 18) CCGCCCCCTCGCCTAGCGCCGCCCGCGCG 1 chr14:64804593-64804693 ( 60) CCCCTCCCCGCAGACCGCCCCCCCTCCCC 1 chr16:3095622-3095722 ( 68) TCCCGGCCCGCCCTCCGCCCCGCCAGCTC 1 chr13:29292516-29292616 ( 57) CCGCGGCAGCCGACCCCGCCTCCTCGGCG 1 chr3:46671422-46671522 ( 17) CGCCCGCACCGCCTCCCTCCGCAGGCCCA 1 chr5:176883298-176883398 ( 64) CCGCCCCCCCACCCCGCCCCCGCCTGGCG 1 chr21:18985013-18985113 ( 53) CCCCGCCCCCGGCACCGCCCCTCAGGCGC 1 chr7:142984852-142984952 ( 65) CTGCGCCTGCGCCTGCGCCCTGCCGCGCC 1 chr20:35723338-35723438 ( 46) CCCCACCCCTGCCCCGCCCCTTCCTCGGC 1 chr12:133463517-13346361 ( 59) GCCCGGCCCCGGCCCCCGGCCCCGGCCTC 1 chr6:31869273-31869373 ( 15) CGACGCCGCCGCCGCCGCGCGCGCGGGGC 1 chr1:87793751-87793851 ( 21) GCGCCGCCGCCGCCGCCGCCTCCGAGCCG 1 chr12:14133486-14133586 ( 19) CAGCAGCAGCGCCGCCTCCCACCCCGGGC 1 chr11:63684500-63684600 ( 37) TCTCCGCCGCCGCTCGCTCCTCGCGCACA 1 chr15:75287665-75287765 ( 54) CCGAGGCCGTCTCTGCGCGCGCCCGCGCC 1 chr6:135501665-135501765 ( 57) CGCCGTCGCGGCCCCCGGCCACCCCTCCC 1 chr1:155058587-155058687 ( 63) CCACTGCTGGAACCGCAGCCCCCCGCCCC 1 chr9:38068745-38068845 ( 20) CCGCTCCTGCACACGCCACCTCCCGCGGC 1 chr6:53212601-53212701 ( 20) CCGCACCCGCACCCCTTTCCCCGCGCCCG 1 chr2:191744949-191745049 ( 36) CCCCGCCCTACTCTCCGCGCACCCAGAGC 1 chr1:240161166-240161266 ( 17) CAGCCCCGCGGCCACCGCCGACCCGGGCC 1 chr12:53886594-53886694 ( 2) CCCCACCCGGACCACCCCCTTCCGCCGCC 1 chr20:26189795-26189895 ( 67) CCCCAGCGCCCCCTCCTCCGGTCGGCGCC 1 chr1:41156861-41156961 ( 51) CCGCTGCTGTAGCTCGGTCCGTCCTGCCC 1 chr2:220024786-220024886 ( 45) GCGCACGCGCGGCCCCGCCCACCCCTCCC 1 chr1:235666943-235667043 ( 19) TCGCCCCGCCCTCTCCTCCCGCGTTTCCA 1 chr8:63998353-63998453 ( 22) CCGCTGCTGCGGCCGCAGCTACCCGGGCA 1 chr14:93672925-93673025 ( 26) TCACTCCTCTCCCTTCTCCCGCCTGCGCC 1 chr17:55727559-55727659 ( 60) CACCTGCACCCTCTCCCTCCAGCATCCCC 1 chr22:42322444-42322544 ( 47) CCACTGCGTGGCCTGCGGGCTCCTGCGCA 1 chr3:115502697-115502797 ( 11) TCCCTCCTGCCCTGCGGCCCGCGCACCCC 1 chr1:157016069-157016169 ( 52) TGCCCGCCCAGCCACCGTGCCCGCGCCCC 1 chr6:105850645-105850745 ( 30) TCGCCGGCCGCGCCCGCGCCGCCCGGGCG 1 chr19:12551602-12551702 ( 69) CCGCGGCGTCTGCTCCACCCACCTGCGCT 1 chr2:28789503-28789603 ( 62) CACCTCCCCGCCCCCGGCCCCCAAGCCCC 1 chr2:132439895-132439995 ( 18) CCACGCCCCCGCCACTGACCGCGGAGACC 1 chr5:54522164-54522264 ( 28) GCCCGACGGCCGGCCGCGCCGCCCCCGCA 1 chr6:132833798-132833898 ( 10) TCCCTCCTACACCTCCGACCGCCGTCACC 1 chr3:42696043-42696143 ( 4) CCTCAGCCTCGCGCGCCGGCGCCCCCACC 1 chr20:18117972-18118072 ( 30) CGGCCGCGGCCTCTCTCTCCCGCCCGCCC 1 chr19:1652656-1652756 ( 20) CCCCGGCCGCCTCTCGCGGCCTCTCGCTC 1 chr21:34100055-34100155 ( 53) CCGCAGCCGCCGCCACAGCCGCCGGGAGC 1 chr20:52824153-52824253 ( 59) CCGCGGCAAGGCCTGCTCGCGCCTGGCGC 1 chr5:172196955-172197055 ( 28) TCGCTCCCCCAGCAGCGCCCGCAGGCCTC 1 chrX:54518814-54518914 ( 69) GGCCACCTCCCCCACTGCCCAGCCGGCCC 1 chr17:42287740-42287840 ( 48) TCCCGCCTGGGGCTCGCCCCCGCCTGGTC 1 chr10:38264831-38264931 ( 69) CCCCGCCTCCCAGGCCCTGCCCGCCCGCA 1 chr1:226270663-226270763 ( 53) CGCCCACCGGGTCCGCCCCCACGCGGCCG 1 chr12:54389272-54389372 ( 52) TCCCGCCGGCGCCCCCGCCCTGACGCTCC 1 chr16:85686026-85686126 ( 18) CGCCTCCCCTCTCTCCACCCTCCAGGAGA 1 chr7:37960002-37960102 ( 71) CCACTGCTGCGGCGCCTGGCACGGGCGCG 1 chr17:66097169-66097269 ( 4) CCCCGCCTCCCATCTCCCCCTCGCCCCCC 1 chr3:5163693-5163793 ( 5) ACGCCGCCGCTCGTCCGTCCTCCCGTCCG 1 chr11:9594249-9594349 ( 72) GGGCGGCGCCGGGCCGGGCCCCCCGCCGC 1 chr3:39194838-39194938 ( 70) GCCCCGGAGGCGCCGCCTCCTCCCCCGCC 1 chr5:92957029-92957129 ( 45) CCACTCCCGAGACTCGGCGCGCGCGGGGA 1 chr22:18483781-18483881 ( 24) CCCCGCCCTTCCATGTGCCCGCCCATCCC 1 chr7:30325262-30325362 ( 27) CCGGGGCGCCGGGGGCTGCCTCCCGGACC 1 chr1:228327310-228327410 ( 48) TCACAGCGCCACGCCGGCCCGCCTCCACA 1 chr1:28099521-28099621 ( 44) TAGCCCCGCCCTCACGCGGCGCGCACGCG 1 chr1:220959824-220959924 ( 13) CAGCGCGGCAACCCCGAGCCACCCGGGCC 1 chr18:11688863-11688963 ( 3) CCCGGCCTGCCGCACCCCCTTCCCGCAGC 1 chrX:41301095-41301195 ( 15) TGTCTGCTCCCCGCCGCGGCACCCGCACC 1 chr5:87956378-87956478 ( 9) CCCCTGCCGAGCCCCGCAGCGCGGCGCCG 1 chr3:57678150-57678250 ( 40) CCGCCACAAGGGCCGGCGCCTCGCGGCCC 1 chr10:17242919-17243019 ( 22) GCGCGCCGCCGTGTCCACCCCTCCAGACG 1 chr22:18632384-18632484 ( 63) CCGCGGCTGCCGTTGCAGCCGCGCACCTG 1 chr9:6015291-6015391 ( 62) CCCCGCCCATCCCCGCCGGCGCCTCGCCT 1 chr12:50134883-50134983 ( 71) CCCCCGCAGACTCGCCTCCGCCCCACCCC 1 chr20:43538573-43538673 ( 70) CGGCCCCATCCTGTCCATCCGCGTGTGCC 1 chr2:122512808-122512908 ( 65) GCGCGGCGGACAGCCCGTCCTCCGGCGCG 1 chr2:97778748-97778848 ( 34) CCGGATCCCGTCCTCCCGCCTCGCACCCA 1 chr2:238969017-238969117 ( 14) GCGCAGCCTCGCCTCCCCGCTGGGGGCTC 1 chr16:31117046-31117146 ( 10) TGGCAGCCGCAGCCTCCTCCGCCTGCGGC 1 chr16:25118122-25118222 ( 11) TCACTTCCGGCGCGCCGTCCACCCGCCCT 1 chr16:28223090-28223190 ( 3) CACCGCCCGTGCGTCCACGCGGGCCGGCA 1 chr21:26979532-26979632 ( 63) GCGCAAGTCCTTCTCCGCCCTCCTCCCCC 1 chr2:131113344-131113444 ( 49) CCAGGGCCGGGGCGCGCCGCTCGCGGACC 1 chr4:184364931-184365031 ( 19) TAACCTCGCCGCCGCCGCGCGCCCTCGCG 1 chr2:239198740-239198840 ( 56) GCCCGGCTGCTGCGCCCTGCACACACCCA 1 chr5:72143714-72143814 ( 71) CCGAGGCCTGGCCGCCACCCGCGCAGCTC 1 chr3:149070321-149070421 ( 18) CCCCAGCAGGGACTGGCACCACCGCCCCA 1 chr19:1205114-1205214 ( 48) CCTCGTCTCCCCATGCCTGCTTCCCGCCC 1 chr8:32404983-32405083 ( 10) TCCCACCGCTGGCGGCTCGCGTCCTGGCC 1 chr15:65669206-65669306 ( 70) CCACGCCAGCCCGCCCCGCTTGCTCCCGC 1 chr4:1283013-1283113 ( 2) AGCCCGCACCCCATCGGCCCGCCCCGGGC 1 chr2:27070683-27070783 ( 69) GCGCCCCCGCCCAGCCCTCCAGCGGTCCA 1 chr1:207818241-207818341 ( 42) CCCGCGCCGCTCATGGCGCCTCCCGTCCG 1 chr5:130500023-130500123 ( 41) CCGGAGCGCCGGCACGCGCCGGCAGGCCG 1 chr11:9405731-9405831 ( 65) CCACCACACCACACCGAGGCGCCCCGGCG 1 chr1:1290803-1290903 ( 6) GCGCGGCCCCGGGGGTGGCCCCGCGCGGC 1 chr13:67804239-67804339 ( 30) CGCCTCGGTGACCCCCATCCGCCCGCAGC 1 chr9:140445608-140445708 ( 60) CGGCTCCGCCCAGAGGAGCCGCGCCCGGC 1 chr2:207139321-207139421 ( 53) GAGCGCCACGGCCCCGCTGCCCGCGGAGC 1 chr3:32279461-32279561 ( 52) GACCGCCCCGCGGAGGCGCCGCGGACGCC 1 chr4:37455195-37455295 ( 12) CCCCGCCGCATCCTCGGGGCGTGCAGGTA 1 chr15:99193144-99193244 ( 67) CAGCGCCAGGGTCTGCGGCGGCGCGGGGA 1 chr4:82136705-82136805 ( 41) CCGAAGCAGCTCGTCGACGCGCCCCTCCC 1 chr3:49130317-49130417 ( 20) TGGCCCGCCCGCCCCCGCCCGCCGTTGTG 1 chr14:51134367-51134467 ( 52) TAACCGCTACCACTACCGCCGCCGCCGCC 1 chr6:7313203-7313303 ( 62) CCTCTCCGCGCTGAGCAGCCACGTCGGCG 1 chr16:4465914-4466014 ( 37) CCGCCGCCGTGCCCGTCGCCATGAACCGC 1 chr19:6475729-6475829 ( 65) CGTCCACGCGTCCTGCGCGCTCCTGTACC 1 chr12:94853055-94853155 ( 45) CCACGCCGACGTCACCCACGCCACCGACG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCSCBSCSSCSSCYCCSBCCKCCCSSSCC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 10.1572 E= 3.1e-057 -369 116 -103 -17 -89 130 -87 -469 -52 42 48 -189 -311 166 -261 -1361 -52 -29 45 6 -189 71 53 -237 -1361 169 -239 -1361 -61 59 -34 -11 -211 71 42 -137 -123 105 -44 -123 -79 48 42 -137 -152 74 -7 -37 -169 136 -87 -311 -44 20 -103 83 -311 121 -11 -311 -1361 120 -11 -189 -52 53 9 -79 -189 45 23 -5 -1361 137 -29 -1361 -1361 166 -287 -269 -30 -95 53 31 -1361 145 -129 -137 -189 125 -24 -1361 -169 113 -95 -52 -37 -11 61 -79 -1361 76 48 -111 -61 61 48 -469 -1361 130 -74 -99 -37 111 -67 -311 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCSCBSCSSCSSCYCCSBCCKCCCSSSCC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 125 E= 3.1e-057 0.016000 0.656000 0.144000 0.184000 0.112000 0.720000 0.160000 0.008000 0.144000 0.392000 0.408000 0.056000 0.024000 0.928000 0.048000 0.000000 0.144000 0.240000 0.400000 0.216000 0.056000 0.480000 0.424000 0.040000 0.000000 0.944000 0.056000 0.000000 0.136000 0.440000 0.232000 0.192000 0.048000 0.480000 0.392000 0.080000 0.088000 0.608000 0.216000 0.088000 0.120000 0.408000 0.392000 0.080000 0.072000 0.488000 0.280000 0.160000 0.064000 0.752000 0.160000 0.024000 0.152000 0.336000 0.144000 0.368000 0.024000 0.680000 0.272000 0.024000 0.000000 0.672000 0.272000 0.056000 0.144000 0.424000 0.312000 0.120000 0.056000 0.400000 0.344000 0.200000 0.000000 0.760000 0.240000 0.000000 0.000000 0.928000 0.040000 0.032000 0.168000 0.152000 0.424000 0.256000 0.000000 0.800000 0.120000 0.080000 0.056000 0.696000 0.248000 0.000000 0.064000 0.640000 0.152000 0.144000 0.160000 0.272000 0.448000 0.120000 0.000000 0.496000 0.408000 0.096000 0.136000 0.448000 0.408000 0.008000 0.000000 0.720000 0.176000 0.104000 0.160000 0.632000 0.184000 0.024000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCSCBSCSSCSSCYCCSBCCKCCCSSSCC MEME-2 regular expression -------------------------------------------------------------------------------- CC[GC]C[GCT][CG]C[CG][CG][CG][CG][CG]C[TC][CG][CG][CG][CGT][CG]C[GT]C[CG]C[GC][CG][CG]CC -------------------------------------------------------------------------------- Time 501.51 secs. ******************************************************************************** ******************************************************************************** MOTIF MTGASTCACH MEME-3 width = 10 sites = 69 llr = 683 E-value = 2.0e-024 ******************************************************************************** -------------------------------------------------------------------------------- Motif MTGASTCACH MEME-3 Description -------------------------------------------------------------------------------- Simplified A 4::a1::a:3 pos.-specific C 4:::4:a:73 probability G 1:a:4::::1 matrix T :a::1a::34 bits 2.3 * * * * 2.0 * * * * 1.8 * * *** 1.6 *** *** Relative 1.4 *** *** Entropy 1.1 *** *** (14.3 bits) 0.9 *** **** 0.7 *** **** 0.5 **** **** 0.2 ********** 0.0 ---------- Multilevel CTGACTCACT consensus A G TA sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCACH MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------- chr6:8085354-8085454 + 28 5.80e-07 tggtgcaatc atgactcact gtggccttga chr19:43304101-43304201 - 30 1.16e-06 TGCCTGAAGA ATGAGTCACT CGGAGCTCAC chr17:61040708-61040808 - 71 1.98e-06 GTGAGTAACT CTGACTCACT GTCCTCACCA chr3:10399382-10399482 + 71 1.98e-06 ACAGTGTGAG CTGACTCACT CCGCCTGCCA chr1:225696219-225696319 + 36 1.98e-06 CTAATCTGGG CTGACTCACT GATGCTGTCA chr15:55919889-55919989 + 32 1.98e-06 aatgccgact ctgactcact aagtctgggg chr22:45973944-45974044 + 89 3.38e-06 GTAAACATGA CTGAGTCACT GG chr3:152048942-152049042 + 51 3.38e-06 CTAAGTCATA CTGAGTCACT TGTAGATTTT chr11:27956379-27956479 + 11 3.38e-06 GATGGTGAAT ATGACTCACA TTCAGCGAAT chr14:58637742-58637842 + 65 3.38e-06 CCACACGGTG CTGAGTCACT GCGACCTGAT chr17:72038982-72039082 + 49 3.38e-06 CTTCGCAGGA ATGACTCACA GGTGGCACAG chr4:78842952-78843052 + 88 4.37e-06 tcagGAATTC ATGactcatt cgt chr12:123547341-12354744 + 55 4.37e-06 GTCCAAAGAG ATGAGTCACA CACGAAAGCA chr3:190283994-190284094 - 61 4.37e-06 TGGCAGAATT ATGAGTCACA GTTCCTGGAT chr16:30411252-30411352 - 31 4.37e-06 GTGCAGCCGA ATGACTCATT TCCCGACGCA chr6:140364432-140364532 + 76 5.60e-06 catctcttgg atgagtcatt gaacatagat chr6:122012187-122012287 - 72 5.60e-06 TTTCTAAGAG ATGAGTCATT ACTTTGACCC chr5:77175476-77175576 + 31 5.60e-06 gataaagggg ctgactcaca ggaggattca chr11:61449685-61449785 - 83 5.60e-06 CTCAGCAG CTGACTCACA GTGTCAACAG chr9:127023390-127023490 + 89 5.60e-06 CTTCACGGGC CTGACTCACA GT chr8:1703755-1703855 - 61 7.00e-06 ACAAGCGGAG CTGACTCATT CTGAAGATGA chr20:33900140-33900240 + 73 7.00e-06 ATGGAATGAG CTGAGTCACA GGAAGTTCAG chr8:38635290-38635390 + 19 7.00e-06 tgggtgagaa ctgagtcaca ggccacacct chr4:73969939-73970039 - 15 7.00e-06 CTCAAATGAG CTGAGTCACA CATGCTCAGT chr5:148292533-148292633 - 26 7.00e-06 GCACTCCTGC CTGACTCATT CAGGGATGCC chr5:175236696-175236796 + 77 8.81e-06 ATTTATGATG CTGAGTCATT CGCAGAGAAT chr1:86315912-86316012 + 63 8.81e-06 ACCTAAGGAA ATGACTCATA CCCTATGCTC chr18:46543353-46543453 - 25 1.00e-05 GGCAGGGTGC ATGAGTCACC TTAAAAGAAT chr18:11500434-11500534 + 89 1.00e-05 TCAACCTCAC ATGAGTCACC CT chr6:30781819-30781919 + 47 1.00e-05 TGACTGGGTA ATGAGTCACC GGTAGAAGTC chr8:107058210-107058310 - 81 1.00e-05 CACAAGATGG ATGAGTCACC TTAAATCCCT chr10:30471427-30471527 + 81 1.18e-05 ATGGAATGTT CTGACTCACC CGGCAGTTAA chr19:41829518-41829618 - 88 1.35e-05 TGG CTGAGTCACC AGGCGGCCAT chr11:120418644-12041874 - 50 1.35e-05 TTGATTCGGG CTGAGTCACC TACCAGCGCC chr16:19711603-19711703 + 11 1.41e-05 ACAACCAGAC ATGACTCATC TGACGGAGCT chr2:28126833-28126933 - 44 1.41e-05 CGCCTAGGAC ATGACTCATC CCTCTGTCCA chr1:209562586-209562686 + 9 1.51e-05 CAGAGCCC ATGAGTCATC CAGAGCACAT chr1:65891264-65891364 - 31 1.59e-05 ATGTCCTCCC CTGACTCATC ACCCTGAAAA chr6:143123241-143123341 - 42 1.59e-05 ACTTCATCAC CTGACTCATC AAACCCTCTC chr2:71758660-71758760 - 62 1.73e-05 ATATACATTG CTGAGTCATC AGCATTGAAC chr3:159500830-159500930 - 75 1.73e-05 CCAAAGTCAA CTGAATCACT TATCTTGGAT chr20:19796159-19796259 - 26 1.85e-05 GTCAACGGCA ATGAATCACA GTGCTCAGGA chr7:31097831-31097931 - 44 1.85e-05 GGAGCGAGCG GTGACTCACT GGGCTCGAAG chr7:95128901-95129001 - 77 2.01e-05 TTTTCTTTCT ATGAATCATT TCCTTTAGCA chr5:5351451-5351551 - 17 2.01e-05 CTGGCTGTTG ATGATTCACT CAACCGTTGG chr6:86070764-86070864 + 43 2.01e-05 GGACAGTGAA GTGAGTCACT AACTTCAATG chr13:23895540-23895640 - 9 2.01e-05 CTCCCAGCCC GTGAGTCACT GAGGAGCC chr17:47990858-47990958 - 88 2.06e-05 ATG CTGAATCACA GACCCTACGG chr14:100222564-10022266 - 10 2.25e-05 GAGCCAGGCG GTGACTCACA GCAATAGGC chr10:47074154-47074254 - 28 2.51e-05 CCATTCCTCC GTGAGTCACA TCTGCTAACA chr15:80888856-80888956 - 39 2.51e-05 GAGCGAGGAA GTGAGTCACA GAGTCAAACA chr5:82872886-82872986 - 7 2.51e-05 GATGTAAGCC ATGAATCATA AGACCT chr12:87054597-87054697 - 55 2.51e-05 ACCCAGGGCT ATGAATCACC ATGCAGATGT chr4:125561218-125561318 - 16 2.51e-05 TCATGCCATG GTGACTCATT ACAGTGTCAC chr10:106697226-10669732 - 81 2.84e-05 TGAGCAAGAA TTGACTCACT CATTCTTTTT chr4:123795004-123795104 + 75 3.19e-05 ACTTTGGGTA TTGAGTCACT GGTACTGATC chr8:1694159-1694259 + 12 3.58e-05 CTTGTGACTG GTGAGTCACC CAGCCCAGCA chr9:4833042-4833142 - 39 3.58e-05 TTCAGTTCAA ATGATTCACC ATCAATCCCA chr4:75543890-75543990 + 45 3.75e-05 agatatttgc ttgactcaca tctccttcaa chr11:15096077-15096177 - 91 4.15e-05 . CTGATTCACC AGGAGCCACG chr17:9264003-9264103 + 36 4.15e-05 GCATGCCTGA CTGAGTCACG GCTGAGCACC chr5:140997767-140997867 - 14 4.65e-05 TTCCTTCTCC ATGATTCATC CTTTTTACCT chr3:52080306-52080406 - 89 4.91e-05 CA CTTACTCACT TGCACATTCA chr17:27966292-27966392 + 85 4.91e-05 GGGGCTCTCT CTGACTCATG CCTGCA chr10:80911245-80911345 - 65 4.91e-05 CCAGCAATTC CTGACTCATG GCCACCCAGC chr6:111912284-111912384 + 20 5.28e-05 TCTGATTTGT CTGAGTCATG GCCAGTGTCA chr17:48715676-48715776 - 38 5.97e-05 AGCCTTGCCC ATTACTCATA CATTTTTGTG chr2:234156295-234156395 + 48 5.97e-05 CATCCCCTGT ATTACTCACC CTCCAGCCAG chr17:66790148-66790248 + 12 6.34e-05 TCATCAAGCC ATGACTCAAT ACACAGTGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCACH MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:8085354-8085454 5.8e-07 27_[+3]_63 chr19:43304101-43304201 1.2e-06 29_[-3]_61 chr17:61040708-61040808 2e-06 70_[-3]_20 chr3:10399382-10399482 2e-06 70_[+3]_20 chr1:225696219-225696319 2e-06 35_[+3]_55 chr15:55919889-55919989 2e-06 31_[+3]_59 chr22:45973944-45974044 3.4e-06 88_[+3]_2 chr3:152048942-152049042 3.4e-06 50_[+3]_40 chr11:27956379-27956479 3.4e-06 10_[+3]_80 chr14:58637742-58637842 3.4e-06 64_[+3]_26 chr17:72038982-72039082 3.4e-06 48_[+3]_42 chr4:78842952-78843052 4.4e-06 87_[+3]_3 chr12:123547341-12354744 4.4e-06 54_[+3]_36 chr3:190283994-190284094 4.4e-06 60_[-3]_30 chr16:30411252-30411352 4.4e-06 30_[-3]_60 chr6:140364432-140364532 5.6e-06 75_[+3]_15 chr6:122012187-122012287 5.6e-06 71_[-3]_19 chr5:77175476-77175576 5.6e-06 30_[+3]_60 chr11:61449685-61449785 5.6e-06 82_[-3]_8 chr9:127023390-127023490 5.6e-06 88_[+3]_2 chr8:1703755-1703855 7e-06 60_[-3]_30 chr20:33900140-33900240 7e-06 72_[+3]_18 chr8:38635290-38635390 7e-06 18_[+3]_72 chr4:73969939-73970039 7e-06 14_[-3]_76 chr5:148292533-148292633 7e-06 25_[-3]_65 chr5:175236696-175236796 8.8e-06 76_[+3]_14 chr1:86315912-86316012 8.8e-06 62_[+3]_28 chr18:46543353-46543453 1e-05 24_[-3]_66 chr18:11500434-11500534 1e-05 88_[+3]_2 chr6:30781819-30781919 1e-05 46_[+3]_44 chr8:107058210-107058310 1e-05 80_[-3]_10 chr10:30471427-30471527 1.2e-05 80_[+3]_10 chr19:41829518-41829618 1.4e-05 87_[-3]_3 chr11:120418644-12041874 1.4e-05 49_[-3]_41 chr16:19711603-19711703 1.4e-05 10_[+3]_80 chr2:28126833-28126933 1.4e-05 43_[-3]_47 chr1:209562586-209562686 1.5e-05 8_[+3]_82 chr1:65891264-65891364 1.6e-05 30_[-3]_60 chr6:143123241-143123341 1.6e-05 41_[-3]_49 chr2:71758660-71758760 1.7e-05 61_[-3]_29 chr3:159500830-159500930 1.7e-05 74_[-3]_16 chr20:19796159-19796259 1.9e-05 25_[-3]_65 chr7:31097831-31097931 1.9e-05 43_[-3]_47 chr7:95128901-95129001 2e-05 76_[-3]_14 chr5:5351451-5351551 2e-05 16_[-3]_74 chr6:86070764-86070864 2e-05 42_[+3]_48 chr13:23895540-23895640 2e-05 8_[-3]_82 chr17:47990858-47990958 2.1e-05 87_[-3]_3 chr14:100222564-10022266 2.2e-05 9_[-3]_81 chr10:47074154-47074254 2.5e-05 27_[-3]_63 chr15:80888856-80888956 2.5e-05 38_[-3]_52 chr5:82872886-82872986 2.5e-05 6_[-3]_84 chr12:87054597-87054697 2.5e-05 54_[-3]_36 chr4:125561218-125561318 2.5e-05 15_[-3]_75 chr10:106697226-10669732 2.8e-05 80_[-3]_10 chr4:123795004-123795104 3.2e-05 74_[+3]_16 chr8:1694159-1694259 3.6e-05 11_[+3]_79 chr9:4833042-4833142 3.6e-05 38_[-3]_52 chr4:75543890-75543990 3.8e-05 44_[+3]_46 chr11:15096077-15096177 4.1e-05 90_[-3] chr17:9264003-9264103 4.1e-05 35_[+3]_55 chr5:140997767-140997867 4.7e-05 13_[-3]_77 chr3:52080306-52080406 4.9e-05 88_[-3]_2 chr17:27966292-27966392 4.9e-05 84_[+3]_6 chr10:80911245-80911345 4.9e-05 64_[-3]_26 chr6:111912284-111912384 5.3e-05 19_[+3]_71 chr17:48715676-48715776 6e-05 37_[-3]_53 chr2:234156295-234156395 6e-05 47_[+3]_43 chr17:66790148-66790248 6.3e-05 11_[+3]_79 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCACH MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MTGASTCACH width=10 seqs=69 chr6:8085354-8085454 ( 28) ATGACTCACT 1 chr19:43304101-43304201 ( 30) ATGAGTCACT 1 chr17:61040708-61040808 ( 71) CTGACTCACT 1 chr3:10399382-10399482 ( 71) CTGACTCACT 1 chr1:225696219-225696319 ( 36) CTGACTCACT 1 chr15:55919889-55919989 ( 32) CTGACTCACT 1 chr22:45973944-45974044 ( 89) CTGAGTCACT 1 chr3:152048942-152049042 ( 51) CTGAGTCACT 1 chr11:27956379-27956479 ( 11) ATGACTCACA 1 chr14:58637742-58637842 ( 65) CTGAGTCACT 1 chr17:72038982-72039082 ( 49) ATGACTCACA 1 chr4:78842952-78843052 ( 88) ATGACTCATT 1 chr12:123547341-12354744 ( 55) ATGAGTCACA 1 chr3:190283994-190284094 ( 61) ATGAGTCACA 1 chr16:30411252-30411352 ( 31) ATGACTCATT 1 chr6:140364432-140364532 ( 76) ATGAGTCATT 1 chr6:122012187-122012287 ( 72) ATGAGTCATT 1 chr5:77175476-77175576 ( 31) CTGACTCACA 1 chr11:61449685-61449785 ( 83) CTGACTCACA 1 chr9:127023390-127023490 ( 89) CTGACTCACA 1 chr8:1703755-1703855 ( 61) CTGACTCATT 1 chr20:33900140-33900240 ( 73) CTGAGTCACA 1 chr8:38635290-38635390 ( 19) CTGAGTCACA 1 chr4:73969939-73970039 ( 15) CTGAGTCACA 1 chr5:148292533-148292633 ( 26) CTGACTCATT 1 chr5:175236696-175236796 ( 77) CTGAGTCATT 1 chr1:86315912-86316012 ( 63) ATGACTCATA 1 chr18:46543353-46543453 ( 25) ATGAGTCACC 1 chr18:11500434-11500534 ( 89) ATGAGTCACC 1 chr6:30781819-30781919 ( 47) ATGAGTCACC 1 chr8:107058210-107058310 ( 81) ATGAGTCACC 1 chr10:30471427-30471527 ( 81) CTGACTCACC 1 chr19:41829518-41829618 ( 88) CTGAGTCACC 1 chr11:120418644-12041874 ( 50) CTGAGTCACC 1 chr16:19711603-19711703 ( 11) ATGACTCATC 1 chr2:28126833-28126933 ( 44) ATGACTCATC 1 chr1:209562586-209562686 ( 9) ATGAGTCATC 1 chr1:65891264-65891364 ( 31) CTGACTCATC 1 chr6:143123241-143123341 ( 42) CTGACTCATC 1 chr2:71758660-71758760 ( 62) CTGAGTCATC 1 chr3:159500830-159500930 ( 75) CTGAATCACT 1 chr20:19796159-19796259 ( 26) ATGAATCACA 1 chr7:31097831-31097931 ( 44) GTGACTCACT 1 chr7:95128901-95129001 ( 77) ATGAATCATT 1 chr5:5351451-5351551 ( 17) ATGATTCACT 1 chr6:86070764-86070864 ( 43) GTGAGTCACT 1 chr13:23895540-23895640 ( 9) GTGAGTCACT 1 chr17:47990858-47990958 ( 88) CTGAATCACA 1 chr14:100222564-10022266 ( 10) GTGACTCACA 1 chr10:47074154-47074254 ( 28) GTGAGTCACA 1 chr15:80888856-80888956 ( 39) GTGAGTCACA 1 chr5:82872886-82872986 ( 7) ATGAATCATA 1 chr12:87054597-87054697 ( 55) ATGAATCACC 1 chr4:125561218-125561318 ( 16) GTGACTCATT 1 chr10:106697226-10669732 ( 81) TTGACTCACT 1 chr4:123795004-123795104 ( 75) TTGAGTCACT 1 chr8:1694159-1694259 ( 12) GTGAGTCACC 1 chr9:4833042-4833142 ( 39) ATGATTCACC 1 chr4:75543890-75543990 ( 45) TTGACTCACA 1 chr11:15096077-15096177 ( 91) CTGATTCACC 1 chr17:9264003-9264103 ( 36) CTGAGTCACG 1 chr5:140997767-140997867 ( 14) ATGATTCATC 1 chr3:52080306-52080406 ( 89) CTTACTCACT 1 chr17:27966292-27966392 ( 85) CTGACTCATG 1 chr10:80911245-80911345 ( 65) CTGACTCATG 1 chr6:111912284-111912384 ( 20) CTGAGTCATG 1 chr17:48715676-48715776 ( 38) ATTACTCATA 1 chr2:234156295-234156395 ( 48) ATTACTCACC 1 chr17:66790148-66790248 ( 12) ATGACTCAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCACH MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 10 n= 54600 bayes= 11.0026 E= 2.0e-024 97 57 -134 -225 -1275 -1275 -1275 227 -1275 -1275 171 -225 227 -1275 -1275 -1275 -125 62 47 -183 -1275 -1275 -1275 227 -1275 177 -1275 -1275 227 -1275 -1275 -1275 -383 119 -1275 62 41 -9 -234 92 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCACH MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 10 nsites= 69 E= 2.0e-024 0.405797 0.434783 0.115942 0.043478 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.956522 0.043478 1.000000 0.000000 0.000000 0.000000 0.086957 0.449275 0.405797 0.057971 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.014493 0.666667 0.000000 0.318841 0.275362 0.275362 0.057971 0.391304 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCACH MEME-3 regular expression -------------------------------------------------------------------------------- [CA]TGA[CG]TCA[CT][TAC] -------------------------------------------------------------------------------- Time 717.12 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:58548677-58548777 5.17e-01 100 chr1:220959824-220959924 4.04e-02 12_[-2(1.39e-05)]_59 chr6:1477560-1477660 3.26e-03 25_[-1(1.21e-06)]_46 chr4:57940984-57941084 2.24e-01 100 chr8:18812296-18812396 1.16e-01 100 chr19:49140308-49140408 1.23e-01 100 chr20:3800383-3800483 8.52e-01 100 chr2:72594737-72594837 8.10e-01 100 chr18:35158801-35158901 7.92e-01 100 chr16:4465914-4466014 2.44e-01 100 chr17:56468779-56468879 7.79e-02 28_[-1(8.10e-05)]_43 chr12:116864743-11686484 2.75e-01 100 chr6:53212601-53212701 1.18e-02 19_[+2(1.92e-06)]_52 chr21:45147360-45147460 4.68e-02 100 chr6:134158991-134159091 3.37e-01 100 chr2:45837640-45837740 2.98e-01 100 chr11:3071125-3071225 6.17e-01 100 chr16:25118122-25118222 7.57e-02 10_[+2(2.74e-05)]_61 chr8:119021413-119021513 2.89e-01 100 chr3:177076276-177076376 4.44e-01 100 chr1:38412413-38412513 6.33e-01 100 chr17:42287740-42287840 3.19e-02 47_[+2(8.32e-06)]_24 chr11:9594249-9594349 3.48e-02 71_[+2(1.14e-05)] chr20:52486046-52486146 6.35e-03 4_[+1(2.98e-06)]_67 chr4:82136705-82136805 8.95e-02 40_[+2(8.58e-05)]_31 chr1:231275677-231275777 4.00e-01 100 chr6:135028629-135028729 4.92e-01 100 chr17:72038982-72039082 1.54e-02 48_[+3(3.38e-06)]_32_[-3(4.37e-05)] chr12:57038983-57039083 3.87e-01 100 chr22:40440117-40440217 3.31e-01 100 chr6:72117069-72117169 1.40e-01 100 chr17:8092875-8092975 6.50e-01 100 chr16:87822297-87822397 4.17e-01 100 chr9:126773174-126773274 9.44e-05 63_[+2(1.10e-07)]_8 chr14:93672925-93673025 1.07e-02 25_[-2(3.08e-06)]_46 chr6:34687990-34688090 2.23e-01 100 chr2:207139321-207139421 1.32e-01 52_[-2(6.68e-05)]_19 chr10:43801340-43801440 3.90e-01 100 chr2:97778748-97778848 6.19e-02 33_[+2(2.49e-05)]_38 chr15:75287665-75287765 5.63e-03 53_[-2(1.70e-06)]_18 chr5:176805845-176805945 5.20e-01 100 chr3:40518487-40518587 6.86e-01 100 chr14:100222564-10022266 2.35e-02 9_[-3(2.25e-05)]_81 chr8:63998353-63998453 1.71e-02 21_[+2(3.08e-06)]_10_[+2(2.74e-05)]_\ 11 chr1:85779648-85779748 2.09e-01 100 chr14:77228897-77228997 8.60e-01 100 chr13:23895540-23895640 5.49e-02 8_[-3(2.01e-05)]_39_[-3(3.58e-05)]_\ 33 chr7:129209229-129209329 8.95e-01 100 chr9:98075330-98075430 9.77e-01 100 chr4:139832059-139832159 4.54e-01 100 chr1:203527409-203527509 3.18e-04 26_[+1(1.38e-05)]_5_[+1(2.67e-06)]_\ 11 chr6:139694210-139694310 9.48e-01 100 chr11:705018-705118 5.76e-01 100 chr2:68478268-68478368 4.60e-01 100 chr14:70041320-70041420 3.43e-02 40_[-1(3.18e-05)]_31 chr5:90278323-90278423 1.16e-01 100 chr19:36184756-36184856 7.15e-02 100 chr5:65220737-65220837 1.24e-03 [+2(1.73e-07)]_25_[-2(2.74e-05)]_17 chr7:23387230-23387330 3.80e-01 100 chr2:73338678-73338778 1.10e-01 100 chr17:64672539-64672639 5.93e-01 100 chr1:241805112-241805212 2.16e-01 100 chr1:225839704-225839804 7.60e-03 47_[-1(2.67e-06)]_24 chr16:20775174-20775274 5.52e-01 100 chr7:152160906-152161006 3.16e-03 38_[-2(4.08e-07)]_33 chr17:77787141-77787241 5.70e-04 [-2(6.86e-08)]_16_[-2(2.00e-07)]_26 chr2:43386023-43386123 3.62e-02 100 chr6:124123760-124123860 9.62e-01 100 chr10:17554449-17554549 8.43e-01 100 chr12:46825220-46825320 1.91e-03 55_[-1(1.21e-06)]_16 chr9:127023390-127023490 1.64e-02 88_[+3(5.60e-06)]_2 chr4:184364931-184365031 9.01e-02 18_[-2(3.01e-05)]_53 chr15:65669206-65669306 9.14e-02 69_[+2(4.73e-05)]_2 chr19:42617758-42617858 4.18e-01 100 chr6:8085354-8085454 1.58e-03 27_[+3(5.80e-07)]_63 chr8:107058210-107058310 8.12e-05 3_[+1(2.67e-06)]_48_[-3(1.00e-05)]_\ 10 chr17:38752639-38752739 3.38e-02 47_[-1(6.88e-05)]_24 chr16:57768637-57768737 2.66e-01 100 chr1:235666943-235667043 1.68e-02 18_[+2(3.08e-06)]_53 chr3:156272460-156272560 7.99e-01 100 chr9:130749328-130749428 1.51e-01 100 chr4:151146042-151146142 1.57e-01 100 chr1:70819948-70820048 3.47e-01 100 chr14:105654380-10565448 9.57e-01 100 chr17:38632498-38632598 7.19e-02 100 chr12:113344636-11334473 6.05e-01 100 chr14:58637742-58637842 5.55e-03 64_[+3(3.38e-06)]_26 chr5:176883298-176883398 3.73e-03 63_[+2(9.08e-07)]_8 chr2:201165425-201165525 1.51e-04 59_[+1(3.16e-08)]_12 chr11:10427777-10427877 2.39e-01 100 chr21:34755231-34755331 2.28e-01 100 chr3:24227438-24227538 4.04e-01 100 chr12:92464016-92464116 5.09e-01 100 chr18:68098219-68098319 2.54e-01 100 chr22:30639598-30639698 7.71e-01 100 chr12:63187545-63187645 1.55e-03 57_[-1(1.53e-06)]_14 chr7:116212088-116212188 2.53e-01 100 chr3:10206377-10206477 6.28e-01 100 chr11:119076441-11907654 5.68e-05 37_[+2(3.24e-09)]_34 chr5:172192048-172192148 3.88e-02 32_[-1(1.03e-05)]_39 chr16:69564326-69564426 9.81e-01 100 chr16:30411252-30411352 7.74e-03 30_[-3(4.37e-06)]_60 chr17:66790148-66790248 2.67e-02 11_[+3(6.34e-05)]_79 chr9:4833042-4833142 5.40e-03 38_[-3(3.58e-05)]_52 chr16:835589-835689 5.62e-01 100 chr7:31097831-31097931 3.53e-02 43_[-3(1.85e-05)]_47 chrX:148576582-148576682 3.14e-06 10_[-1(2.57e-10)]_61 chr19:57832596-57832696 8.71e-01 100 chr3:57678150-57678250 6.36e-02 39_[+2(1.87e-05)]_32 chr2:234156295-234156395 3.11e-02 31_[+3(7.18e-05)]_6_[+3(5.97e-05)]_\ 43 chr16:9146945-9147045 7.46e-01 100 chrX:134155721-134155821 4.58e-01 100 chr15:76050718-76050818 8.26e-01 100 chr12:54378681-54378781 4.66e-01 100 chr20:4151974-4152074 2.89e-01 100 chr2:96191948-96192048 4.75e-01 100 chr14:65173253-65173353 8.13e-01 100 chr19:33210489-33210589 9.81e-01 100 chrY:21728887-21728987 6.97e-01 100 chr11:10344448-10344548 1.47e-01 100 chr10:21653313-21653413 1.53e-01 100 chr11:34352899-34352999 5.56e-01 100 chr10:29448962-29449062 2.04e-04 23_[-1(4.11e-07)]_48 chr9:117373047-117373147 2.56e-04 32_[+1(1.67e-07)]_39 chr10:80911245-80911345 4.94e-03 12_[-2(9.32e-05)]_23_[-3(4.91e-05)]_\ 26 chr2:201170638-201170738 2.81e-02 6_[-1(1.67e-05)]_65 chr2:143621115-143621215 7.11e-03 55_[+1(2.98e-06)]_16 chr7:100752237-100752337 6.48e-01 100 chr5:140997767-140997867 1.41e-02 13_[-3(4.65e-05)]_77 chr5:137673313-137673413 4.59e-01 100 chr16:19078703-19078803 9.45e-01 100 chr2:72374662-72374762 3.41e-01 100 chr12:76384034-76384134 2.86e-03 19_[+1(2.21e-05)]_52 chr12:53886594-53886694 1.41e-02 1_[-2(2.44e-06)]_14_[-2(4.73e-05)]_\ 27 chr3:107718243-107718343 4.07e-02 100 chr18:12640632-12640732 1.32e-02 27_[-1(4.12e-06)]_44 chr4:125561218-125561318 5.60e-06 16_[+3(1.00e-05)]_43_[+1(1.28e-07)]_\ 2 chr2:10829745-10829845 9.30e-01 100 chr3:58291735-58291835 1.35e-01 14_[+2(7.90e-05)]_57 chr15:75870949-75871049 2.22e-01 100 chr7:116346502-116346602 2.72e-05 3_[+1(4.87e-08)]_68 chr20:52824153-52824253 3.10e-02 58_[+2(6.73e-06)]_13 chr3:53272025-53272125 7.37e-01 100 chr22:37898488-37898588 4.19e-01 100 chr6:31869273-31869373 5.91e-03 14_[-2(1.17e-06)]_57 chr1:240161166-240161266 1.21e-02 16_[+2(2.44e-06)]_55 chr5:78907589-78907689 5.08e-01 100 chr2:200320342-200320442 6.62e-01 100 chr2:28126833-28126933 2.40e-02 43_[-3(1.41e-05)]_47 chr16:15968550-15968650 1.89e-02 71_[-1(5.36e-05)] chr12:14133486-14133586 6.81e-03 18_[+2(1.33e-06)]_53 chr7:39772655-39772755 1.82e-01 51_[-2(9.32e-05)]_20 chr3:149070321-149070421 7.91e-02 17_[-2(3.30e-05)]_54 chr1:47656931-47657031 4.21e-01 100 chr1:148241432-148241532 1.75e-01 100 chr2:40005834-40005934 6.55e-01 100 chr22:18483781-18483881 4.93e-02 23_[-2(1.26e-05)]_48 chr19:42721648-42721748 4.56e-01 100 chr11:120418644-12041874 2.90e-02 49_[-3(1.35e-05)]_41 chr2:220024786-220024886 1.56e-02 44_[+2(2.74e-06)]_27 chr2:131113344-131113444 7.56e-02 48_[-2(3.01e-05)]_23 chr11:61449685-61449785 9.13e-03 82_[-3(5.60e-06)]_8 chr8:32404983-32405083 8.78e-02 9_[-2(4.73e-05)]_62 chr16:31117046-31117146 5.91e-02 9_[+2(2.74e-05)]_62 chr16:85686026-85686126 2.52e-02 17_[-2(1.03e-05)]_54 chr1:161410128-161410228 6.73e-01 100 chr5:43020169-43020269 6.02e-05 53_[-1(8.08e-09)]_18 chr22:36724626-36724726 7.55e-01 100 chr9:102583086-102583186 8.29e-01 100 chr17:47990858-47990958 6.57e-02 87_[-3(2.06e-05)]_3 chr5:61708489-61708589 7.28e-01 100 chrX:120181308-120181408 7.24e-01 100 chr15:102264053-10226415 2.08e-01 100 chr5:92957029-92957129 4.40e-02 44_[+2(1.26e-05)]_27 chr3:5163693-5163793 4.57e-02 4_[+2(1.14e-05)]_67 chr19:56915570-56915670 2.28e-02 100 chr3:190283994-190284094 6.51e-03 60_[-3(4.37e-06)]_30 chrX:135055789-135055889 8.33e-01 100 chr14:51134367-51134467 2.05e-01 100 chr10:21813870-21813970 9.26e-01 100 chr14:103577209-10357730 2.37e-01 100 chr7:5594131-5594231 6.14e-01 100 chr16:1876759-1876859 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8.79e-02 100 chr12:6476893-6476993 2.88e-01 100 chr2:161077917-161078017 3.59e-02 6_[+1(6.34e-05)]_65 chr20:43538573-43538673 5.58e-02 69_[+2(2.49e-05)]_2 chr1:846271-846371 2.12e-01 100 chr17:55727559-55727659 1.60e-05 59_[+2(3.46e-06)]_12 chr16:67207820-67207920 8.96e-01 100 chr17:69434740-69434840 6.48e-03 4_[-1(1.67e-05)]_67 chr19:12551602-12551702 1.28e-02 68_[-2(4.85e-06)]_3 chr12:54262397-54262497 7.09e-02 100 chr9:75609630-75609730 1.94e-03 31_[-1(2.98e-06)]_40 chr1:226270663-226270763 3.30e-02 31_[+2(8.32e-06)]_40 chr12:53613046-53613146 6.61e-02 31_[+1(2.21e-05)]_40 chr8:103740721-103740821 6.14e-01 100 chr12:54164034-54164134 1.52e-03 45_[-1(8.47e-06)]_26 chr22:45080658-45080758 4.85e-01 100 chr4:90050426-90050526 7.53e-02 45_[+1(3.18e-05)]_26 chr8:1703755-1703855 6.70e-04 60_[-3(7.00e-06)]_30 chr20:18117972-18118072 3.01e-02 29_[-2(6.73e-06)]_42 chr7:37960002-37960102 4.58e-02 37_[-2(4.73e-05)]_4_[-2(1.14e-05)]_\ 1 chr5:81460494-81460594 4.03e-04 6_[-1(6.46e-08)]_65 chr16:31469265-31469365 6.34e-01 100 chr20:19796159-19796259 4.30e-03 25_[-3(1.85e-05)]_53_[+3(4.65e-05)]_\ 2 chr1:22740675-22740775 3.09e-02 15_[+1(5.36e-05)]_56 chr12:40498731-40498831 9.51e-04 16_[+2(2.32e-07)]_55 chr1:185125737-185125837 8.63e-01 100 chr14:104346341-10434644 1.86e-01 100 chr1:1290803-1290903 1.49e-01 5_[-2(6.68e-05)]_66 chr3:122101730-122101830 8.88e-01 100 chr5:177018903-177019003 7.74e-01 100 chr5:119799745-119799845 2.48e-04 47_[-2(1.78e-08)]_24 chr8:22431903-22432003 9.00e-01 100 chr11:63684500-63684600 8.51e-03 36_[+2(1.50e-06)]_35 chrX:152066064-152066164 7.01e-01 100 chr4:75719764-75719864 9.20e-02 100 chr1:65891264-65891364 1.11e-02 30_[-3(1.59e-05)]_60 chr11:66335861-66335961 2.56e-01 100 chr19:56146161-56146261 7.24e-01 100 chr6:140364432-140364532 3.03e-04 7_[-3(5.60e-06)]_[-1(2.21e-05)]_29_\ [+3(5.60e-06)]_15 chr10:38264831-38264931 3.93e-02 68_[+2(9.24e-06)]_3 chr2:20208602-20208702 2.33e-03 2_[-1(2.40e-06)]_69 chr6:135501665-135501765 1.14e-02 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chr1:55972448-55972548 6.28e-01 100 chr15:72040572-72040672 3.05e-01 100 chr3:170075057-170075157 8.88e-04 61_[-2(8.04e-08)]_10 chr2:71758660-71758760 3.85e-03 25_[+3(4.15e-05)]_26_[-3(1.73e-05)]_\ 29 chr4:120001990-120002090 7.90e-03 30_[-1(4.52e-05)]_41 chr5:172196955-172197055 3.29e-02 27_[+2(7.49e-06)]_44 chr15:99091166-99091266 3.53e-03 10_[+2(4.68e-07)]_61 chr16:46864455-46864555 1.78e-04 37_[+2(1.24e-08)]_34 chr17:46323985-46324085 1.01e-01 1_[-1(8.10e-05)]_70 chr11:3663328-3663428 2.71e-02 100 chr15:27931657-27931757 5.60e-02 23_[-1(1.84e-05)]_48 chr20:62313210-62313310 2.04e-01 100 chr4:15151306-15151406 1.71e-01 100 chr16:711000-711100 5.74e-01 100 chr1:157016069-157016169 1.01e-02 51_[+2(4.34e-06)]_20 chr2:11623156-11623256 8.93e-01 100 chr10:47074154-47074254 3.65e-02 27_[-3(2.51e-05)]_63 chrX:48769133-48769233 2.91e-01 100 chr19:44555669-44555769 7.73e-01 100 chr16:2059745-2059845 8.87e-01 100 chr5:137827256-137827356 3.07e-01 100 chr22:18111403-18111503 5.50e-02 100 chr2:36608116-36608216 2.81e-01 100 chr2:47194210-47194310 4.16e-02 9_[+1(3.48e-05)]_62 chr12:116818741-11681884 7.30e-02 26_[+1(4.52e-05)]_45 chr11:75287512-75287612 4.07e-01 100 chr18:44496867-44496967 3.38e-03 27_[+2(4.08e-07)]_11_[+2(9.08e-07)]_\ 4 chr6:34164099-34164199 6.31e-01 100 chr12:47473550-47473650 1.02e-01 100 chr6:27840831-27840931 7.16e-02 40_[+1(2.66e-05)]_31 chr1:87793751-87793851 8.83e-03 20_[+2(1.33e-06)]_17_[+2(3.95e-05)]_\ 5 chr13:99852364-99852464 9.65e-01 100 chr10:3509320-3509420 7.00e-03 54_[-1(4.92e-05)]_17 chr9:138818472-138818572 6.10e-01 100 chr9:137516510-137516610 1.08e-01 100 chr6:3023390-3023490 7.88e-01 100 chr1:8761918-8762018 2.72e-02 22_[+1(3.80e-05)]_49 chr17:44337842-44337942 2.09e-01 100 chr3:70048622-70048722 2.77e-01 100 chr12:47426501-47426601 4.14e-03 44_[+1(1.36e-06)]_27 chr11:15096077-15096177 6.71e-02 90_[-3(4.15e-05)] chr19:13273414-13273514 6.51e-02 100 chr7:95128901-95129001 1.25e-03 76_[-3(2.01e-05)]_14 chr18:74534722-74534822 1.20e-04 7_[-2(1.24e-08)]_19_[+2(3.30e-05)]_\ 16 chrX:20393020-20393120 4.44e-04 46_[-1(3.70e-06)]_25 chr17:61040708-61040808 3.54e-03 70_[-3(1.98e-06)]_1_[+3(8.48e-05)]_\ 9 chr17:68164886-68164986 8.57e-01 100 chr8:1694159-1694259 5.00e-02 10_[-3(3.19e-05)]_80 chr10:2992008-2992108 2.26e-04 5_[-1(2.14e-06)]_66 chr9:118994514-118994614 5.85e-02 100 chr17:55520501-55520601 4.53e-02 100 chr10:80827073-80827173 7.26e-01 100 chr15:66789341-66789441 5.88e-01 100 chr7:30325262-30325362 4.72e-02 26_[+2(1.39e-05)]_45 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: surya.stanford.edu ********************************************************************************