# DREME 4.12.0
#     command: dreme -v 1 -oc ../meme_out/tye7_eth_idr/dreme_out -png -dna -p ../meme_out/tye7_eth_idr/seqs-centered -n ../meme_out/tye7_eth_idr/seqs-shuffled
#   positives: 385 from ../meme_out/tye7_eth_idr/seqs-centered (Wed May 20 14:37:38 PDT 2020)
#   negatives: 385 from ../meme_out/tye7_eth_idr/seqs-shuffled (Wed May 20 14:37:38 PDT 2020)
#        host: nandi.stanford.edu
#        when: Wed May 20 14:43:28 PDT 2020

MEME version 4.12.0

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.293 C 0.211 G 0.214 T 0.282


MOTIF ARAAAARA DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    ARAAAARA   TYTTTTYT         77         26   3.5e-008   1.1e-003
#         AAAAAAAA   TTTTTTTT         45         16   7.3e-005   2.2e+000
#         AGAAAAGA   TCTTTTCT         11          0   4.5e-004   1.4e+001
#         AGAAAAAA   TTTTTTCT         29          9   6.3e-004   1.9e+001
#         AAAAAAGA   TCTTTTTT         26          9   2.5e-003   7.4e+001

letter-probability matrix: alength= 4 w= 8 nsites= 95 E= 1.1e-003
1.000000 0.000000 0.000000 0.000000
0.610526 0.000000 0.389474 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.705263 0.000000 0.294737 0.000000
1.000000 0.000000 0.000000 0.000000


# Stopping reason: E-value threshold exceeded
#    Running time: 4.75 seconds