Invoking: getsize seqnotcut_memechip_out/seq-not-cut.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.716795 Invoking: fasta-most -min 50 < seqnotcut_memechip_out/seq-not-cut.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.448707 Invoking: fasta-center -dna -len 100 < seqnotcut_memechip_out/seq-not-cut.fa 1> seqnotcut_memechip_out/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.678559 Invoking: fasta-shuffle-letters seqnotcut_memechip_out/seqs-centered seqnotcut_memechip_out/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.291696 Invoking: fasta-subsample seqnotcut_memechip_out/seqs-centered 600 -rest seqnotcut_memechip_out/seqs-discarded -seed 1 1> seqnotcut_memechip_out/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 1.281831 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/background Finished invoke: name: bg status: 0 time: 0.108254 Invoking: meme seqnotcut_memechip_out/seqs-sampled -oc seqnotcut_memechip_out/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile seqnotcut_memechip_out/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 896.636956 Invoking: dreme -v 1 -oc seqnotcut_memechip_out/dreme_out -png -dna -p seqnotcut_memechip_out/seqs-centered -n seqnotcut_memechip_out/seqs-shuffled Finished invoke: name: dreme status: 0 time: 5244.164 Invoking: centrimo -seqlen 210 -verbosity 1 -oc seqnotcut_memechip_out/centrimo_out -bfile seqnotcut_memechip_out/background seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 5.250051 Invoking: tomtom -verbosity 1 -text -thresh 0.1 seqnotcut_memechip_out/combined.meme seqnotcut_memechip_out/combined.meme 1> seqnotcut_memechip_out/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.864452 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_1 -bgfile seqnotcut_memechip_out/background -primary ATGYADAT seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.560433 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_2 -bgfile seqnotcut_memechip_out/background -primary MATRACAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.456674 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_3 -bgfile seqnotcut_memechip_out/background -primary CMCAG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.462568 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_4 -bgfile seqnotcut_memechip_out/background -primary DAAATR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.476927 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_5 -bgfile seqnotcut_memechip_out/background -primary AGRRAR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 1.736497 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_6 -bgfile seqnotcut_memechip_out/background -primary CCCCDCCC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.420924 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_7 -bgfile seqnotcut_memechip_out/background -primary CDGSAG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.540168 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_8 -bgfile seqnotcut_memechip_out/background -primary ACGTRD seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.425091 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_9 -bgfile seqnotcut_memechip_out/background -primary ACACAYAC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.455892 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_10 -bgfile seqnotcut_memechip_out/background -primary AGRKGGCG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.486317 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_11 -bgfile seqnotcut_memechip_out/background -primary RCATTCCW seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.429402 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_12 -bgfile seqnotcut_memechip_out/background -primary AAAAVAAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.430428 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_13 -bgfile seqnotcut_memechip_out/background -primary AARAMAGAAARARRAADRMAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.539498 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_14 -bgfile seqnotcut_memechip_out/background -primary ACARAGR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.508421 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_15 -bgfile seqnotcut_memechip_out/background -primary SCGGSBGCGSRGCVGGRGSCGGGRGSSBG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.646241 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_16 -bgfile seqnotcut_memechip_out/background -primary AHTACAGG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.531157 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_17 -bgfile seqnotcut_memechip_out/background -primary GTTTCY seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.552011 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_18 -bgfile seqnotcut_memechip_out/background -primary AGGCNGAG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.533257 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_19 -bgfile seqnotcut_memechip_out/background -primary CACBG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo19 status: 0 time: 0.485375 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_20 -bgfile seqnotcut_memechip_out/background -primary RAATR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo20 status: 0 time: 0.427497 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_21 -bgfile seqnotcut_memechip_out/background -primary CACMTGS seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo21 status: 0 time: 0.541648 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_22 -bgfile seqnotcut_memechip_out/background -primary GAGACRGR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo22 status: 0 time: 0.464468 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_23 -bgfile seqnotcut_memechip_out/background -primary TTTTWAAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo23 status: 0 time: 0.575952 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_24 -bgfile seqnotcut_memechip_out/background -primary TMTGTAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo24 status: 0 time: 0.427957 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_25 -bgfile seqnotcut_memechip_out/background -primary CTGGYCTC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo25 status: 0 time: 1.745439 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_26 -bgfile seqnotcut_memechip_out/background -primary CCDGGAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo26 status: 0 time: 0.475586 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_27 -bgfile seqnotcut_memechip_out/background -primary KAAAACA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo27 status: 0 time: 0.475639 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_28 -bgfile seqnotcut_memechip_out/background -primary CCACTAGR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo28 status: 0 time: 0.448226 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_29 -bgfile seqnotcut_memechip_out/background -primary ADCCCGGG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo29 status: 0 time: 0.485175 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_30 -bgfile seqnotcut_memechip_out/background -primary CCCATCTC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo30 status: 0 time: 0.535825 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_31 -bgfile seqnotcut_memechip_out/background -primary ARAGGCAG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo31 status: 0 time: 0.488689 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_1 --bgfile seqnotcut_memechip_out/background --motif ATGYADAT seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo1 status: 0 time: 3.548445 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_2 --bgfile seqnotcut_memechip_out/background --motif MATRACAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo2 status: 0 time: 3.20437 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_3 --bgfile seqnotcut_memechip_out/background --motif CMCAG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo3 status: 0 time: 2.663757 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_4 --bgfile seqnotcut_memechip_out/background --motif DAAATR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo4 status: 0 time: 3.278903 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_5 --bgfile seqnotcut_memechip_out/background --motif AGRRAR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo5 status: 0 time: 2.70131 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_6 --bgfile seqnotcut_memechip_out/background --motif CCCCDCCC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo6 status: 0 time: 2.663532 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_7 --bgfile seqnotcut_memechip_out/background --motif CDGSAG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo7 status: 0 time: 2.490078 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_8 --bgfile seqnotcut_memechip_out/background --motif ACGTRD seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo8 status: 0 time: 2.942998 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_9 --bgfile seqnotcut_memechip_out/background --motif ACACAYAC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo9 status: 0 time: 2.508873 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_10 --bgfile seqnotcut_memechip_out/background --motif AGRKGGCG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo10 status: 0 time: 2.535892 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_11 --bgfile seqnotcut_memechip_out/background --motif RCATTCCW seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo11 status: 0 time: 2.495646 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_12 --bgfile seqnotcut_memechip_out/background --motif AAAAVAAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo12 status: 0 time: 2.781232 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_13 --bgfile seqnotcut_memechip_out/background --motif AARAMAGAAARARRAADRMAA seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo13 status: 0 time: 3.329218 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_14 --bgfile seqnotcut_memechip_out/background --motif ACARAGR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo14 status: 0 time: 2.688105 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_15 --bgfile seqnotcut_memechip_out/background --motif SCGGSBGCGSRGCVGGRGSCGGGRGSSBG seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo15 status: 0 time: 3.772366 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_16 --bgfile seqnotcut_memechip_out/background --motif AHTACAGG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo16 status: 0 time: 2.644564 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_17 --bgfile seqnotcut_memechip_out/background --motif GTTTCY seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo17 status: 0 time: 2.805011 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_18 --bgfile seqnotcut_memechip_out/background --motif AGGCNGAG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo18 status: 0 time: 2.566392 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_19 --bgfile seqnotcut_memechip_out/background --motif CACBG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo19 status: 0 time: 2.66855 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_20 --bgfile seqnotcut_memechip_out/background --motif RAATR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo20 status: 0 time: 2.592056 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_21 --bgfile seqnotcut_memechip_out/background --motif CACMTGS seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo21 status: 0 time: 2.624258 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_22 --bgfile seqnotcut_memechip_out/background --motif GAGACRGR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo22 status: 0 time: 2.683931 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_23 --bgfile seqnotcut_memechip_out/background --motif TTTTWAAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo23 status: 0 time: 3.296153 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_24 --bgfile seqnotcut_memechip_out/background --motif TMTGTAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo24 status: 0 time: 2.842639 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_25 --bgfile seqnotcut_memechip_out/background --motif CTGGYCTC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo25 status: 0 time: 2.797122 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_26 --bgfile seqnotcut_memechip_out/background --motif CCDGGAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo26 status: 0 time: 2.661297 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_27 --bgfile seqnotcut_memechip_out/background --motif KAAAACA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo27 status: 0 time: 2.856717 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_28 --bgfile seqnotcut_memechip_out/background --motif CCACTAGR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo28 status: 0 time: 2.49889 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_29 --bgfile seqnotcut_memechip_out/background --motif ADCCCGGG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo29 status: 0 time: 3.479096 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_30 --bgfile seqnotcut_memechip_out/background --motif CCCATCTC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo30 status: 0 time: 2.830376 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_31 --bgfile seqnotcut_memechip_out/background --motif ARAGGCAG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo31 status: 0 time: 2.614727 Writing output Invoking: meme-chip_html_to_tsv seqnotcut_memechip_out/meme-chip.html seqnotcut_memechip_out/summary.tsv Finished invoke: name: summary status: 0 time: 0.276868 Done