******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= cutrun_memechip_out/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr1:101251083-101251183 1.0000 100 chr21:35014106-35014206 1.0000 100 chr7:126747661-126747761 1.0000 100 chr17:42588811-42588911 1.0000 100 chr3:173325590-173325690 1.0000 100 chr10:111934091-11193419 1.0000 100 chr13:100800646-10080074 1.0000 100 chrX:42851598-42851698 1.0000 100 chr6:101844277-101844377 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chr2:201068131-201068231 1.0000 100 chr12:91775159-91775259 1.0000 100 chr1:204679449-204679549 1.0000 100 chr16:11730077-11730177 1.0000 100 chr3:104238308-104238408 1.0000 100 chr10:81830432-81830532 1.0000 100 chr14:36004208-36004308 1.0000 100 chr14:64805409-64805509 1.0000 100 chr1:95873629-95873729 1.0000 100 chr6:24683908-24684008 1.0000 100 chr2:139914280-139914380 1.0000 100 chr20:44657848-44657948 1.0000 100 chr1:242749335-242749435 1.0000 100 chr9:28821314-28821414 1.0000 100 chr15:27421013-27421113 1.0000 100 chr9:118315414-118315514 1.0000 100 chr4:185538792-185538892 1.0000 100 chr19:46463883-46463983 1.0000 100 chr13:43167072-43167172 1.0000 100 chr3:138564728-138564828 1.0000 100 chrX:106027132-106027232 1.0000 100 chr22:36806120-36806220 1.0000 100 chr1:37720800-37720900 1.0000 100 chr3:18385764-18385864 1.0000 100 chr8:18416396-18416496 1.0000 100 chr5:108022196-108022296 1.0000 100 chr1:30294500-30294600 1.0000 100 chr18:25297771-25297871 1.0000 100 chr11:63298741-63298841 1.0000 100 chr6:78901889-78901989 1.0000 100 chr4:186227142-186227242 1.0000 100 chr13:68597156-68597256 1.0000 100 chr4:24722663-24722763 1.0000 100 chr7:68569093-68569193 1.0000 100 chr8:128830415-128830515 1.0000 100 chr8:82754821-82754921 1.0000 100 chr8:39759615-39759715 1.0000 100 chr18:26083615-26083715 1.0000 100 chr4:44542737-44542837 1.0000 100 chr17:25672483-25672583 1.0000 100 chr2:169061310-169061410 1.0000 100 chr1:227544191-227544291 1.0000 100 chr17:10779249-10779349 1.0000 100 chr6:76703121-76703221 1.0000 100 chr6:15208254-15208354 1.0000 100 chr4:113782001-113782101 1.0000 100 chr3:29735355-29735455 1.0000 100 chr20:56804509-56804609 1.0000 100 chr1:159147036-159147136 1.0000 100 chr7:113792426-113792526 1.0000 100 chr22:40573859-40573959 1.0000 100 chr7:142511009-142511109 1.0000 100 chr16:83453863-83453963 1.0000 100 chr6:168609371-168609471 1.0000 100 chr6:18752400-18752500 1.0000 100 chr10:112678852-11267895 1.0000 100 chr1:15710877-15710977 1.0000 100 chr6:115736571-115736671 1.0000 100 chr2:6054025-6054125 1.0000 100 chr5:92946352-92946452 1.0000 100 chr2:52697303-52697403 1.0000 100 chr16:25866387-25866487 1.0000 100 chr12:75652956-75653056 1.0000 100 chr2:62932421-62932521 1.0000 100 chr6:26199421-26199521 1.0000 100 chr1:247987384-247987484 1.0000 100 chr12:74024278-74024378 1.0000 100 chr17:65693202-65693302 1.0000 100 chr2:163697144-163697244 1.0000 100 chr21:37679303-37679403 1.0000 100 chr12:50092488-50092588 1.0000 100 chr10:20276712-20276812 1.0000 100 chr14:72243619-72243719 1.0000 100 chr5:80611225-80611325 1.0000 100 chr2:205466330-205466430 1.0000 100 chr8:104608012-104608112 1.0000 100 chr6:161298692-161298792 1.0000 100 chr3:115333768-115333868 1.0000 100 chr1:67981292-67981392 1.0000 100 chr6:14640339-14640439 1.0000 100 chr3:112073764-112073864 1.0000 100 chr1:11533497-11533597 1.0000 100 chr6:4895708-4895808 1.0000 100 chr11:27741878-27741978 1.0000 100 chr15:90955709-90955809 1.0000 100 chr12:77266118-77266218 1.0000 100 chr3:124079580-124079680 1.0000 100 chr5:64437912-64438012 1.0000 100 chr8:142526753-142526853 1.0000 100 chr6:116918035-116918135 1.0000 100 chr9:3362076-3362176 1.0000 100 chr10:32666986-32667086 1.0000 100 chrX:70474558-70474658 1.0000 100 chr16:16064876-16064976 1.0000 100 chr3:54675152-54675252 1.0000 100 chr8:95450378-95450478 1.0000 100 chr6:113064000-113064100 1.0000 100 chr12:124556515-12455661 1.0000 100 chr22:41123295-41123395 1.0000 100 chr9:90020473-90020573 1.0000 100 chr17:36765698-36765798 1.0000 100 chr1:76696543-76696643 1.0000 100 chr3:168557301-168557401 1.0000 100 chr2:8379830-8379930 1.0000 100 chr5:81327403-81327503 1.0000 100 chr10:73555012-73555112 1.0000 100 chr12:46519056-46519156 1.0000 100 chr10:114592289-11459238 1.0000 100 chr11:31145207-31145307 1.0000 100 chr10:104121510-10412161 1.0000 100 chr17:7553910-7554010 1.0000 100 chr14:44223999-44224099 1.0000 100 chr20:9553267-9553367 1.0000 100 chr12:108608197-10860829 1.0000 100 chr17:77290580-77290680 1.0000 100 chr6:74108218-74108318 1.0000 100 chr4:149803716-149803816 1.0000 100 chr1:64857819-64857919 1.0000 100 chr6:87825195-87825295 1.0000 100 chr15:69087699-69087799 1.0000 100 chr6:19663514-19663614 1.0000 100 chr6:158129461-158129561 1.0000 100 chr3:181658408-181658508 1.0000 100 chr10:21818124-21818224 1.0000 100 chr7:22842226-22842326 1.0000 100 chr2:120060728-120060828 1.0000 100 chr7:26988135-26988235 1.0000 100 chr2:192765776-192765876 1.0000 100 chr15:90956112-90956212 1.0000 100 chr1:50774499-50774599 1.0000 100 chr15:71723183-71723283 1.0000 100 chr5:113695980-113696080 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme cutrun_memechip_out/seqs-sampled -oc cutrun_memechip_out/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile cutrun_memechip_out/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 594 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59400 N= 594 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.286 C 0.214 G 0.214 T 0.286 Background letter frequencies (from cutrun_memechip_out/background): A 0.283 C 0.217 G 0.217 T 0.283 ******************************************************************************** ******************************************************************************** MOTIF GCTGTCCRTGGTGCTGAA MEME-1 width = 18 sites = 33 llr = 659 E-value = 5.0e-118 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCTGTCCRTGGTGCTGAA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2::::::42:::1:::97 pos.-specific C :a:2:aa11:::2a:::2 probability G 8::8:::31aa:7::a1: matrix T ::a:9::17::a::a::1 bits 2.2 * ** ** * 2.0 * ** ** * * 1.8 ** ** *** *** 1.5 ** *** *** **** Relative 1.3 ******* *** **** Entropy 1.1 ******* ******** (28.8 bits) 0.9 ******* ******** 0.7 ******* ********* 0.4 ******* ********** 0.2 ****************** 0.0 ------------------ Multilevel GCTGTCCATGGTGCTGAA consensus G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCRTGGTGCTGAA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------ chr17:77290580-77290680 - 28 7.30e-12 CCCGCAGGTC GCTGTCCGTGGTGCTGAA CTCCTGCCTT chr17:45041694-45041794 - 54 7.30e-12 GGCCAGCGAA GCTGTCCGTGGTGCTGAA CACTTGGCTG chr1:154540251-154540351 - 47 7.30e-12 CGGGTGGGGC GCTGTCCGTGGTGCTGAA GCCGCGCCCG chr5:161495485-161495585 - 48 2.41e-11 CACCAGGACT GCTGTCCCTGGTGCTGAA CCATGTTTGC chr16:10989214-10989314 - 80 3.70e-11 GGA GCTGTCCGTGGTGCTGAC GGGAGGGCAG chr5:152655726-152655826 - 42 5.39e-11 TGTCCGGGAT GCTGTCCATGGTCCTGAA CTTCTGCCAT chr7:126747661-126747761 + 11 5.39e-11 TGTGCTTGGA GCTGTCCATGGTGCTGAC TATTCATTCA chr8:67089687-67089787 + 54 9.87e-11 TCGGATGGGC GCTGTCCGCGGTGCTGAA GCGCCTGGGG chr9:34413248-34413348 + 46 9.87e-11 GATGAAAGGC GCTCTCCGTGGTGCTGAA CAATCTTGCC chr1:37486083-37486183 + 38 9.87e-11 GGCCCTGGCT GCTCTCCGTGGTGCTGAA CACAGAGGTT chr22:43845163-43845263 - 30 1.32e-10 GGGGGTTGGC ACTGTCCGTGGTGCTGAA GATATGGCGG chr9:133060949-133061049 - 32 1.32e-10 GGACCTTGCT ACTGTCCGTGGTGCTGAA ACACCACAGT chr9:136474521-136474621 + 7 1.58e-10 TGGGGA GCTGTCCCTGGTGCTGAC GGCTCGTCCG chr5:132901699-132901799 - 75 2.59e-10 AGTGTGCT GCTGTCCATGGTGCTGGA TCCCTAGGGT chr17:6207088-6207188 - 27 3.04e-10 GGTGCTGGGT GCTGTCCCGGGTGCTGAA AAGTCAAAGA chr20:47139683-47139783 + 17 3.04e-10 tgagcactga gctgtcctaggtgctgaa atgatttcat chr11:113861868-11386196 - 53 4.78e-10 ACCAGCTGGT GCTGGCCGTGGTGCTGAA GCTCTCATCT chr6:105335273-105335373 - 37 4.78e-10 CACGTGCATT ACTGTCCATGGTCCTGAA TTTGCTGAAA chr2:16727452-16727552 + 52 5.14e-10 CACCTAGGTT GCTCTCCAAGGTGCTGAA TCAATTTGTC chr9:120821854-120821954 + 42 6.43e-10 GATGTCAGGC GCTATCCGTGGTGCTGAA AGAAGTTATT chr16:83453863-83453963 - 32 7.29e-10 TTTCTAGGGA GCTGTCCTTGGTACTGAA CAATTTTTCC chr10:73555012-73555112 - 53 1.06e-09 ACGTGGAGCA GCTCTCCATGGTCCTGAC CAACCCATGC chr6:116918035-116918135 + 58 1.06e-09 CATGAGTGCT GCTGTCCACGGTACTGAA CCATCAATGC chr19:34258812-34258912 + 34 1.06e-09 CGCTGATGGA GCTGTCCAGGGTCCTGAC GTGCAGCCCA chr8:142526753-142526853 + 39 1.28e-09 CCAGCATGGC GCTGTCCACGGTGCTGAT TTAGGAAAGT chr14:96401388-96401488 + 40 1.28e-09 ACTGGAAGGA GCTCTCCATGGTGCTGAT CTATTTTGCA chr10:104121510-10412161 + 57 1.38e-09 TCACAAAGCT GCTGTCCAAGGTGCTGAG CACTATAACT chr16:49160990-49161090 - 31 1.48e-09 GGGTGTTGGT CCTGTCCATGGTCCTGAA GCCCTCAAAC chr1:175694842-175694942 - 37 1.72e-09 GGCTTCAGGA ACTGTCCTAGGTGCTGAA TATCCAGCAG chr14:96419518-96419618 - 51 1.88e-09 AGCAATAGTC GCTGTCCTTGGTACTGAC TGGTAAAGGA chr6:146349183-146349283 + 36 2.03e-09 TGGACCGAGC ACTGTCCAGGGTCCTGAA GGCGGCAGGG chr3:187387429-187387529 - 55 4.12e-09 CCTGGGAAGC GCTGACCCAGGTGCTGAA ACGCAGACCT chr13:94342280-94342380 - 21 1.01e-08 CTGCCAGGGA GCTGTCCATGGTCCTAGA CTTTCTAACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCRTGGTGCTGAA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:77290580-77290680 7.3e-12 27_[-1]_55 chr17:45041694-45041794 7.3e-12 53_[-1]_29 chr1:154540251-154540351 7.3e-12 46_[-1]_36 chr5:161495485-161495585 2.4e-11 47_[-1]_35 chr16:10989214-10989314 3.7e-11 79_[-1]_3 chr5:152655726-152655826 5.4e-11 41_[-1]_41 chr7:126747661-126747761 5.4e-11 10_[+1]_72 chr8:67089687-67089787 9.9e-11 53_[+1]_29 chr9:34413248-34413348 9.9e-11 45_[+1]_37 chr1:37486083-37486183 9.9e-11 37_[+1]_45 chr22:43845163-43845263 1.3e-10 29_[-1]_53 chr9:133060949-133061049 1.3e-10 31_[-1]_51 chr9:136474521-136474621 1.6e-10 6_[+1]_76 chr5:132901699-132901799 2.6e-10 74_[-1]_8 chr17:6207088-6207188 3e-10 26_[-1]_56 chr20:47139683-47139783 3e-10 16_[+1]_66 chr11:113861868-11386196 4.8e-10 52_[-1]_30 chr6:105335273-105335373 4.8e-10 36_[-1]_46 chr2:16727452-16727552 5.1e-10 51_[+1]_31 chr9:120821854-120821954 6.4e-10 41_[+1]_41 chr16:83453863-83453963 7.3e-10 31_[-1]_51 chr10:73555012-73555112 1.1e-09 52_[-1]_30 chr6:116918035-116918135 1.1e-09 57_[+1]_25 chr19:34258812-34258912 1.1e-09 33_[+1]_49 chr8:142526753-142526853 1.3e-09 38_[+1]_44 chr14:96401388-96401488 1.3e-09 39_[+1]_43 chr10:104121510-10412161 1.4e-09 56_[+1]_26 chr16:49160990-49161090 1.5e-09 30_[-1]_52 chr1:175694842-175694942 1.7e-09 36_[-1]_46 chr14:96419518-96419618 1.9e-09 50_[-1]_32 chr6:146349183-146349283 2e-09 35_[+1]_47 chr3:187387429-187387529 4.1e-09 54_[-1]_28 chr13:94342280-94342380 1e-08 20_[-1]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCRTGGTGCTGAA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCTGTCCRTGGTGCTGAA width=18 seqs=33 chr17:77290580-77290680 ( 28) GCTGTCCGTGGTGCTGAA 1 chr17:45041694-45041794 ( 54) GCTGTCCGTGGTGCTGAA 1 chr1:154540251-154540351 ( 47) GCTGTCCGTGGTGCTGAA 1 chr5:161495485-161495585 ( 48) GCTGTCCCTGGTGCTGAA 1 chr16:10989214-10989314 ( 80) GCTGTCCGTGGTGCTGAC 1 chr5:152655726-152655826 ( 42) GCTGTCCATGGTCCTGAA 1 chr7:126747661-126747761 ( 11) GCTGTCCATGGTGCTGAC 1 chr8:67089687-67089787 ( 54) GCTGTCCGCGGTGCTGAA 1 chr9:34413248-34413348 ( 46) GCTCTCCGTGGTGCTGAA 1 chr1:37486083-37486183 ( 38) GCTCTCCGTGGTGCTGAA 1 chr22:43845163-43845263 ( 30) ACTGTCCGTGGTGCTGAA 1 chr9:133060949-133061049 ( 32) ACTGTCCGTGGTGCTGAA 1 chr9:136474521-136474621 ( 7) GCTGTCCCTGGTGCTGAC 1 chr5:132901699-132901799 ( 75) GCTGTCCATGGTGCTGGA 1 chr17:6207088-6207188 ( 27) GCTGTCCCGGGTGCTGAA 1 chr20:47139683-47139783 ( 17) GCTGTCCTAGGTGCTGAA 1 chr11:113861868-11386196 ( 53) GCTGGCCGTGGTGCTGAA 1 chr6:105335273-105335373 ( 37) ACTGTCCATGGTCCTGAA 1 chr2:16727452-16727552 ( 52) GCTCTCCAAGGTGCTGAA 1 chr9:120821854-120821954 ( 42) GCTATCCGTGGTGCTGAA 1 chr16:83453863-83453963 ( 32) GCTGTCCTTGGTACTGAA 1 chr10:73555012-73555112 ( 53) GCTCTCCATGGTCCTGAC 1 chr6:116918035-116918135 ( 58) GCTGTCCACGGTACTGAA 1 chr19:34258812-34258912 ( 34) GCTGTCCAGGGTCCTGAC 1 chr8:142526753-142526853 ( 39) GCTGTCCACGGTGCTGAT 1 chr14:96401388-96401488 ( 40) GCTCTCCATGGTGCTGAT 1 chr10:104121510-10412161 ( 57) GCTGTCCAAGGTGCTGAG 1 chr16:49160990-49161090 ( 31) CCTGTCCATGGTCCTGAA 1 chr1:175694842-175694942 ( 37) ACTGTCCTAGGTGCTGAA 1 chr14:96419518-96419618 ( 51) GCTGTCCTTGGTACTGAC 1 chr6:146349183-146349283 ( 36) ACTGTCCAGGGTCCTGAA 1 chr3:187387429-187387529 ( 55) GCTGACCCAGGTGCTGAA 1 chr13:94342280-94342380 ( 21) GCTGTCCATGGTCCTAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCRTGGTGCTGAA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 18 n= 49302 bayes= 12.2963 E= 5.0e-118 -90 -283 192 -1169 -1169 221 -1169 -1169 -1169 -1169 -1169 182 -322 -52 192 -1169 -322 -1169 -283 173 -1169 221 -1169 -1169 -1169 221 -1169 -1169 58 -84 62 -122 -90 -125 -125 123 -1169 -1169 221 -1169 -1169 -1169 221 -1169 -1169 -1169 -1169 182 -164 -3 169 -1169 -1169 221 -1169 -1169 -1169 -1169 -1169 182 -322 -1169 216 -1169 173 -1169 -184 -1169 136 -25 -283 -222 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCRTGGTGCTGAA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 18 nsites= 33 E= 5.0e-118 0.151515 0.030303 0.818182 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.030303 0.151515 0.818182 0.000000 0.030303 0.000000 0.030303 0.939394 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.424242 0.121212 0.333333 0.121212 0.151515 0.090909 0.090909 0.666667 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.090909 0.212121 0.696970 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.030303 0.000000 0.969697 0.000000 0.939394 0.000000 0.060606 0.000000 0.727273 0.181818 0.030303 0.060606 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCRTGGTGCTGAA MEME-1 regular expression -------------------------------------------------------------------------------- GCTGTCC[AG]TGGT[GC]CTGAA -------------------------------------------------------------------------------- Time 315.13 secs. ******************************************************************************** ******************************************************************************** MOTIF HATTTRCATAAYAAWRGR MEME-2 width = 18 sites = 131 llr = 1419 E-value = 1.0e-134 ******************************************************************************** -------------------------------------------------------------------------------- Motif HATTTRCATAAYAAWRGR MEME-2 Description -------------------------------------------------------------------------------- Simplified A 37:2242a:6619a5625 pos.-specific C 4112::8::1141:::12 probability G 1::::6:::2:2::1462 matrix T 21967:::a2321:4:11 bits 2.2 2.0 1.8 ** * 1.5 * *** * Relative 1.3 * *** * Entropy 1.1 * *** ** (15.6 bits) 0.9 * * *** ** * 0.7 ** ***** * ** ** 0.4 ******** * ***** 0.2 ***************** 0.0 ------------------ Multilevel CATTTGCATAACAAAAGA consensus A CAA TT TGAG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HATTTRCATAAYAAWRGR MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------ chr1:30294500-30294600 - 47 8.42e-10 GTAAAAAATC CATTTGCATAATAAAAGA TTAGGGTAGG chr3:103852540-103852640 + 58 2.60e-09 gtggaggctg catttgcataataaaagg ctacggtggg chr18:38477888-38477988 - 66 3.22e-09 GTAGAAGCCG CATTTGCATAATAAAGGG TTAGCTTGGG chr6:154664951-154665051 + 19 5.48e-09 aggcgccctg catttgcatattaaaaga ctaaggtggg chr15:68145885-68145985 - 72 7.13e-09 GTAGAAAGCT CATCTGCATAATAAAAGA TTAGGGTGGG chrX:14377842-14377942 + 56 8.92e-09 gtagagaact catctgcataataaagga ttagggtggg chr16:16064876-16064976 - 55 1.42e-08 TGGTACCCTG CATTTGCATATTAAAAGG CTAGGTGGGA chr3:59581605-59581705 - 39 1.42e-08 ACCAGTATCA CATTTGCATAATAATGGC TTCAGCCCCA chr1:178235692-178235792 - 42 1.42e-08 TGGCACTCTG CATTTGCATATTAAAAGG CTAGGGTGGG chr18:77766741-77766841 - 68 1.74e-08 TGCATAAAAA GATTTGCATAATAAAAGG ATGAGTTGGC chr1:64857819-64857919 + 12 2.65e-08 accaCATCTT CATTAGCATAAGAAAAGG TGGGGGCGGG chr17:25672483-25672583 - 83 2.65e-08 . CATCTACATAATAAAAGA TCAGGGTGGG chr1:237402443-237402543 - 60 2.65e-08 GTAGAAAACC CATCTACATAATAAAAGA TTAGGGTGAG chr7:22842226-22842326 + 6 3.22e-08 gaacc tatttgcataagaatagg aggttcttct chr2:240213426-240213526 + 54 4.78e-08 CCGCCGATTa catttgcatgaaaataga acctttgttt chr11:9540448-9540548 + 7 5.79e-08 aggtaa aatttacataacaatgaa atgcacagat chr17:78127961-78128061 - 17 5.79e-08 ATGAGGCTTT CATTTACATAACAAGGGC CTTCACCCCC chr6:164765800-164765900 - 4 6.88e-08 AGGGTAGTAC CATTTACATTTCAATGGA TGC chr5:119951977-119952077 - 73 6.88e-08 GACTACACTA AATCTACATGACAAAGGA GGTATTAAAG chr19:35694208-35694308 - 50 8.22e-08 TAGGAGACTT CATCTGCATAACAAGGGC CTTGTCTTCT chr17:42588811-42588911 - 11 1.36e-07 TGATGACCTG CATTTACATATCAAAGGT TGCTGGCCTG chr1:43079252-43079352 - 22 2.22e-07 AATTATAATG TATTAGCATGATAAAAGA CACTTCCATC chr18:57531349-57531449 + 46 2.59e-07 AGCAAAAGCT CATCTACATAACAATGCA CCAAGGCCCG chr5:109392509-109392609 - 5 3.48e-07 GGGGAAAGAG GATTTGCATTTGAAAAGG TACA chr3:54675152-54675252 - 43 4.03e-07 TTAGAGGCTT CATCTACATAACAAAACC CTGGCTTCCA chr18:70111918-70112018 - 22 4.03e-07 TAAGAAGATA TATATGCATTTCAAAAGA GCAGAGAAAG chr1:239225078-239225178 - 14 4.65e-07 GGAGTTTGAG TTTTTACATAACAATAGC TCACTAATAC chr8:72928396-72928496 + 40 4.65e-07 aattataata cattagcatactaaagga agagcccact chr17:2777436-2777536 + 9 4.65e-07 CAACTGGA CATTTGCATTTAAATGGG GACTCTTGAA chr3:78396319-78396419 + 70 6.15e-07 AAAATGTTGC AATTTACATATTAATGAA GTTTTTATAA chr18:54653989-54654089 - 14 6.15e-07 GGAAGAACAA TGTTTGCATAACAATAGG TAAAACACAC chr4:27892317-27892417 + 25 6.15e-07 ctgctgcata aatttgcataaataaaga ggagctgaat chr2:214552731-214552831 - 38 7.06e-07 TGTGGGAGAA AATTTGCATATGTAAAGA ATCTCTATTA chr3:181433493-181433593 - 48 7.06e-07 GAATAATCCG TATATGCATTACAATGGC TGGCCAGGCT chr4:65460537-65460637 + 53 7.06e-07 tatttacagg catctacatgataaaaaa gatactctgc chr12:74024278-74024378 - 8 8.07e-07 CATTCGGATC TTTTTGCATGACAAAAAA GCTAGGC chr1:227544191-227544291 - 74 8.07e-07 GATGGTCAC AATTTACATGACCATAGA GCGTTCCCAG chr9:38214427-38214527 + 15 8.07e-07 TTCTGGTTTA GATTTGCATTAGAAAGAG ACCTTAATTA chr3:66623256-66623356 - 73 8.07e-07 CCAGGTACCA GCTCTACATAACAAAGGG TGAGGGAGCT chr12:77266118-77266218 + 53 9.20e-07 tggcgccctg catttgcatactaaaaag ctagggtgtg chr1:96940833-96940933 - 34 9.20e-07 AGTTTTAAAA GATTTACATCTCAAAGGG GTGGAAAAAG chr16:25866387-25866487 - 77 1.05e-06 GGGCTT CATCTACATAACAAGAAC TTTGACTTCC chr1:97025213-97025313 - 76 1.05e-06 GAGACTC CTTATGAATAACAAAAGA CTCTCTTACC chr1:241176011-241176111 + 50 1.05e-06 cgtgaggttt catctgcataacaagata gcctttgctt chr7:70937920-70938020 - 71 1.05e-06 CTGGAGGCTT CATCTACATAACAAGAAC TTTGGTCTCC chr3:16852056-16852156 - 78 1.19e-06 ATATT CATTTGCATCAGAATAGT CATGAATATT chr10:114813790-11481389 + 35 1.19e-06 AAAAAAGGGA GATTTGCATCACAATGAG CCTTCTATTC chr11:76622241-76622341 - 65 1.19e-06 AATTATAATG CATTAGCATGCGAAAAGA CACTCCCACC chr5:159593226-159593326 - 80 1.19e-06 ACA GATTAGCATGAGAAGAGA CGGATTTAAT chr9:36560739-36560839 - 25 1.34e-06 AATTATAATA CATTAGCATGCTAAAGGA AGCTCCCACA chr9:75830104-75830204 - 71 1.34e-06 TTCATGACAA GCTTAGCATAAGAAAGGG ACAGGAATTT chr1:213083220-213083320 + 2 1.52e-06 A ATTTTACATAAGAATAAA GCAGTTTCTA chr6:47702807-47702907 - 67 1.52e-06 CTGAATTCAC ATTTTACATGTGAAAAGA GGGGCTGGAG chr12:64793970-64794070 + 28 1.52e-06 cagggagact gatttgaataataataaa actcagtctc chr18:76741563-76741663 - 60 1.52e-06 AAAAAAAATC CATTTCCATGACAAAAAG ATTCTTTGTC chr7:68569093-68569193 + 32 1.72e-06 AAAGGAGCTT ATTATGAATAACAAAAGA TGCTCctgag chr3:66983755-66983855 - 51 1.72e-06 ATGCCTTGTA AATCTACATCATAAAGGG CCAGAGAAAG chr2:6054025-6054125 + 26 1.93e-06 ggttaactta gatttgaatttgaaaaga ccaatttggc chr12:94135638-94135738 - 70 2.18e-06 TCTTGGAAAA TCTTTGCATTAAAATAGA TTGAATTACC chr8:104636276-104636376 + 37 2.18e-06 ttccagttga gattagcatttgaaaggc tgaactcagt chrX:139607562-139607662 - 44 2.18e-06 TGCAAATTAG AATTTACATGTCAACAGA CTGGTTTAAC chr11:40224844-40224944 - 31 2.45e-06 TCCCCTCGGT TTTTTGCATTTGAATGGA AGAAAGGTAT chr6:57639117-57639217 - 38 2.45e-06 TTAAAGGAAA CATCAAAATAACAATGGC TTCACTTCCT chr8:139199794-139199894 - 32 2.74e-06 TTGAAAGGAA TTTATGAATAACAAAAGA TGTTCCTATG chr1:247987384-247987484 - 81 3.06e-06 TC CATTTGCATAACAAGATT AAGGTGACGT chrX:151809753-151809853 + 23 3.06e-06 ATGATCTGCA TTTATGCATATGAATAGA GGTCTTCCAA chr10:85519896-85519996 + 70 3.42e-06 ctagatagaa aatttacatctcaaaGAC ACAGAACATA chr17:65141545-65141645 - 52 3.42e-06 ATATTGACTT CATTTACATGTAAATAGT ATGTAAAGTT chr5:150767555-150767655 + 67 3.42e-06 gaggaggctt catctgcatgataagaac cttggtctTG chr4:5200728-5200828 - 21 4.24e-06 AAGCACTTAA CATATTCATTACAATAGG TCCCTGTGGT chr3:2346215-2346315 + 52 4.24e-06 TTCTCTAAGC CACATACATTACAATGGA GACATAAATT chr4:23934648-23934748 - 70 4.24e-06 TTCCACACAG CTCTTGAATAACAAAGGA AAGAGGTAGA chrX:112643610-112643710 + 9 4.24e-06 aaggaact tctatgaataacaataga ccctcttatc chr4:95818071-95818171 - 23 4.72e-06 GACTGGCGGA TATTTACATATGCAAAGC CTGTGAGGAA chr19:35559813-35559913 - 15 5.24e-06 TAAATCAAGA AATAACCATAACAATGGG CAACCAGCAA chr18:58160363-58160463 + 10 5.24e-06 gaggaatcg aatcagcatgagaatgca gctttttcat chr13:72303598-72303698 + 13 5.81e-06 TCCTGTGGAA TCTATGCATAACAATGAC AAACACAATG chr2:176708944-176709044 - 37 5.81e-06 CACAGATACT AATTCACATAACAAAGAG TGGGCAACCA chr18:36510979-36511079 + 63 5.81e-06 GCCTGGTTGG GTTTTGAATTTCAATAGA GAAATTTTGC chr16:63071778-63071878 - 74 7.10e-06 GCCTTCTGG GATTAAAATGACAAAGAA ACACCTCCAG chr6:78901889-78901989 - 5 8.63e-06 ATGAAACTGG AACTTACATTTGAAAGGG AAGT chr6:164899214-164899314 - 43 8.63e-06 AACTAACGTT ACTCAGAATAATAAAGGA AACAACTTTA chr6:98484232-98484332 + 19 8.63e-06 GATTAATGGG CATTATCATGTTAATGGA TGCTTAGGTG chr3:137486501-137486601 + 14 8.63e-06 CGCCACGCTT ACTTAGCATTACAAAACC CTTTTACAAA chr1:178235363-178235463 - 12 8.63e-06 CCAAATGTCC ATTTAACATGTAAAAAGA TGCTCAACTT chr14:97492029-97492129 + 31 9.50e-06 CGATCAATCA GATTTGCATAACTAAACT GTCTGCGAGC chr2:85685949-85686049 + 44 9.50e-06 TCTACGTAAA AATTAACATAACAACAAC AAAAAGGTGG chr13:88150794-88150894 + 80 1.04e-05 AGAAGTACCT TCTCTGAATAACAAAACA GCT chr6:123150638-123150738 + 37 1.04e-05 gaaggggctt gctatgaataacaaaaaa tggtcctttc chr16:88043220-88043320 + 10 1.15e-05 ACTGTGTCT CATTAGAATAAGAAGGAC GGTAACGCTC chr8:104608012-104608112 + 41 1.26e-05 TTTGGTAACT AATTAACATACCAAGAAG TTACTTTCAA chr12:11761845-11761945 + 6 1.26e-05 cagaa aatttacatttataaagg aaatttccat chr5:95806980-95807080 - 72 1.26e-05 GTAGCAGTCG TTTTTACATAAAAATGCG AGGCATCTCA chr8:31096488-31096588 - 23 1.26e-05 GGCAGGCACC ATTTATCATGACAAAAGG CAAGAAAGCC chr7:11998784-11998884 + 49 1.26e-05 ttgaaaggaa aatttacatttataaagg aaatctccaa chr2:163933792-163933892 - 63 1.26e-05 TTGGCTGGCT AATTACCATTTCAAAGAA ATCTGATGGG chr5:66000497-66000597 - 56 1.26e-05 AAGCTCAAGA TTCTTACATATGAAAAGA ATACACAAAA chr3:152811453-152811553 - 56 1.26e-05 ATGCTTCAGC TATCTGCATCTCAATACC TGAGACTTGA chr15:27421013-27421113 + 51 1.38e-05 CTATAGCTCA CATTTGAATGCTAATGaa aattaaacca chr3:76088265-76088365 + 65 1.38e-05 AATTTAAATT ACCTTGCATTTGAAAAGA ACACATGAAT chr9:19968012-19968112 - 39 1.50e-05 TGGAAAGCAG AGTTAGCATAACAAAGAT GATGATGAAG chr14:44223999-44224099 - 40 1.64e-05 AGAAGTTACG CATTAGAATAAAAAGGCA GGCATTCTCA chrX:106027132-106027232 - 37 1.64e-05 TAGTGAATAT AATATACATATGAATTGA AGTAGAGGCT chr9:118315414-118315514 + 23 1.64e-05 GAAAGGATGT TATCTTAATAACAATGGC CTCAGAAATT chr15:66318388-66318488 - 75 1.64e-05 TGAATCAG AATTTGCATTTTAACAAG ACCTCCCAGG chrX:27031328-27031428 + 74 1.79e-05 tatttacatg tatttacataaatatgca tttatgtat chr20:6745286-6745386 - 82 1.79e-05 A AATCAACATTAAAATAGT GATCCCCATG chr1:220512059-220512159 - 78 1.95e-05 AAAGA AATTTACATTTGCAAAAG TGTCTCCCTC chr7:12368714-12368814 - 64 1.95e-05 AAACAGAGAC CTTAAGAATAACAAAGCA GACTTTTTGT chr13:32717799-32717899 + 47 2.13e-05 TGGCAGGTGT CTTCTACATAATAAtact acaggcaggt chr7:146488758-146488858 + 41 2.13e-05 GAATGCCAAC AATTTAAATTCAAATAGA TTTCTCACTG chr13:104833594-10483369 - 45 2.31e-05 CTGGAGTCTT CATCTGCATAACCTTAGC TTCCACAATT chr3:173325590-173325690 - 11 2.31e-05 CTGCAGGTGA TCCATACATAATAAAAGA ATAAATAATA chrX:45712370-45712470 + 66 2.95e-05 TATCTCTCTT GATCATCATAATAAAAGT AAAGTAATTC chr7:70165210-70165310 + 69 2.95e-05 TCCTGTTGGT AACATGAATGACAAGAGA CGGAATCAGT chr2:144649395-144649495 - 31 2.95e-05 CAGCTGTCTA AATTAGCATAATTAAGTC CACATCAATT chr6:158129461-158129561 - 81 3.19e-05 AT AGTTTAAATGATAATAGC CTTTCCCCCA chr3:112073764-112073864 - 63 3.19e-05 TAGCATTTGT GATAGGCATAATAATGGC ACCCCAAAGA chr6:62747388-62747488 - 52 3.73e-05 GCATCTACAA TTTTAGCATCACTATAGG GTTTTAAAAA chr2:178150879-178150979 - 72 4.03e-05 TGGGATGGAG ACTTAACATTTCAATGTA TTACAGTTAG chr3:66041930-66042030 - 54 4.03e-05 CTGATAAGAT GTTATGAATGACAATGCA TGCCGAAACT chr15:71723183-71723283 + 54 4.34e-05 caaataacta cattaccataaaataaga atattcatga chr6:87825195-87825295 - 17 4.68e-05 CATAGTAAAT TATGTGCATATTCAAGGA TGTAAAGGAA chr6:68749039-68749139 - 16 4.68e-05 CTGCTGCAGA AATCTGCATCACAAGTAA AGAGGAGCTA chr18:26083615-26083715 - 57 5.42e-05 ATCATGTTAA AATTTGCATATGCATATT TCACTTGAAA chr1:157016894-157016994 - 8 6.24e-05 GTGTATAGAT AATTTACATATACATATC CACCCCC chr3:181658408-181658508 + 64 6.69e-05 GACTTAAGCC TATCTCCATAACAATTAG CTACAGAATC chr16:25865554-25865654 + 55 6.69e-05 aatgaattgt aattagcatataatgagc agtgaggatg chr1:242749335-242749435 - 48 8.21e-05 CTGTGAGCTT TATAAAAATAACCATGAA CTATAATGTG chr4:25487861-25487961 + 9 1.13e-04 GGTTTGAG TGTACGCATTACAATAGG TTGCTTTCCT chr5:64437912-64438012 + 61 1.28e-04 TGTGTCTTGA GATATACatatatatata aaattttttt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HATTTRCATAAYAAWRGR MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:30294500-30294600 8.4e-10 46_[-2]_36 chr3:103852540-103852640 2.6e-09 57_[+2]_25 chr18:38477888-38477988 3.2e-09 65_[-2]_17 chr6:154664951-154665051 5.5e-09 18_[+2]_64 chr15:68145885-68145985 7.1e-09 71_[-2]_11 chrX:14377842-14377942 8.9e-09 55_[+2]_27 chr16:16064876-16064976 1.4e-08 54_[-2]_28 chr3:59581605-59581705 1.4e-08 38_[-2]_44 chr1:178235692-178235792 1.4e-08 41_[-2]_41 chr18:77766741-77766841 1.7e-08 67_[-2]_15 chr1:64857819-64857919 2.6e-08 11_[+2]_71 chr17:25672483-25672583 2.6e-08 82_[-2] chr1:237402443-237402543 2.6e-08 59_[-2]_23 chr7:22842226-22842326 3.2e-08 5_[+2]_77 chr2:240213426-240213526 4.8e-08 53_[+2]_29 chr11:9540448-9540548 5.8e-08 6_[+2]_76 chr17:78127961-78128061 5.8e-08 16_[-2]_66 chr6:164765800-164765900 6.9e-08 3_[-2]_79 chr5:119951977-119952077 6.9e-08 72_[-2]_10 chr19:35694208-35694308 8.2e-08 49_[-2]_33 chr17:42588811-42588911 1.4e-07 10_[-2]_72 chr1:43079252-43079352 2.2e-07 21_[-2]_61 chr18:57531349-57531449 2.6e-07 45_[+2]_37 chr5:109392509-109392609 3.5e-07 4_[-2]_78 chr3:54675152-54675252 4e-07 42_[-2]_40 chr18:70111918-70112018 4e-07 21_[-2]_61 chr1:239225078-239225178 4.7e-07 13_[-2]_69 chr8:72928396-72928496 4.7e-07 39_[+2]_43 chr17:2777436-2777536 4.7e-07 8_[+2]_74 chr3:78396319-78396419 6.1e-07 69_[+2]_13 chr18:54653989-54654089 6.1e-07 13_[-2]_69 chr4:27892317-27892417 6.1e-07 24_[+2]_58 chr2:214552731-214552831 7.1e-07 37_[-2]_45 chr3:181433493-181433593 7.1e-07 47_[-2]_35 chr4:65460537-65460637 7.1e-07 52_[+2]_30 chr12:74024278-74024378 8.1e-07 7_[-2]_75 chr1:227544191-227544291 8.1e-07 73_[-2]_9 chr9:38214427-38214527 8.1e-07 14_[+2]_68 chr3:66623256-66623356 8.1e-07 72_[-2]_10 chr12:77266118-77266218 9.2e-07 52_[+2]_30 chr1:96940833-96940933 9.2e-07 33_[-2]_49 chr16:25866387-25866487 1e-06 76_[-2]_6 chr1:97025213-97025313 1e-06 75_[-2]_7 chr1:241176011-241176111 1e-06 49_[+2]_33 chr7:70937920-70938020 1e-06 70_[-2]_12 chr3:16852056-16852156 1.2e-06 77_[-2]_5 chr10:114813790-11481389 1.2e-06 34_[+2]_48 chr11:76622241-76622341 1.2e-06 64_[-2]_18 chr5:159593226-159593326 1.2e-06 79_[-2]_3 chr9:36560739-36560839 1.3e-06 24_[-2]_58 chr9:75830104-75830204 1.3e-06 70_[-2]_12 chr1:213083220-213083320 1.5e-06 1_[+2]_81 chr6:47702807-47702907 1.5e-06 66_[-2]_16 chr12:64793970-64794070 1.5e-06 27_[+2]_55 chr18:76741563-76741663 1.5e-06 59_[-2]_23 chr7:68569093-68569193 1.7e-06 31_[+2]_51 chr3:66983755-66983855 1.7e-06 50_[-2]_32 chr2:6054025-6054125 1.9e-06 25_[+2]_57 chr12:94135638-94135738 2.2e-06 69_[-2]_13 chr8:104636276-104636376 2.2e-06 36_[+2]_46 chrX:139607562-139607662 2.2e-06 43_[-2]_39 chr11:40224844-40224944 2.4e-06 30_[-2]_52 chr6:57639117-57639217 2.4e-06 37_[-2]_45 chr8:139199794-139199894 2.7e-06 31_[-2]_51 chr1:247987384-247987484 3.1e-06 80_[-2]_2 chrX:151809753-151809853 3.1e-06 22_[+2]_60 chr10:85519896-85519996 3.4e-06 69_[+2]_13 chr17:65141545-65141645 3.4e-06 51_[-2]_31 chr5:150767555-150767655 3.4e-06 66_[+2]_16 chr4:5200728-5200828 4.2e-06 20_[-2]_62 chr3:2346215-2346315 4.2e-06 51_[+2]_31 chr4:23934648-23934748 4.2e-06 69_[-2]_13 chrX:112643610-112643710 4.2e-06 8_[+2]_74 chr4:95818071-95818171 4.7e-06 22_[-2]_60 chr19:35559813-35559913 5.2e-06 14_[-2]_68 chr18:58160363-58160463 5.2e-06 9_[+2]_73 chr13:72303598-72303698 5.8e-06 12_[+2]_70 chr2:176708944-176709044 5.8e-06 36_[-2]_46 chr18:36510979-36511079 5.8e-06 62_[+2]_20 chr16:63071778-63071878 7.1e-06 73_[-2]_9 chr6:78901889-78901989 8.6e-06 4_[-2]_78 chr6:164899214-164899314 8.6e-06 42_[-2]_40 chr6:98484232-98484332 8.6e-06 18_[+2]_64 chr3:137486501-137486601 8.6e-06 13_[+2]_69 chr1:178235363-178235463 8.6e-06 11_[-2]_71 chr14:97492029-97492129 9.5e-06 30_[+2]_52 chr2:85685949-85686049 9.5e-06 43_[+2]_39 chr13:88150794-88150894 1e-05 79_[+2]_3 chr6:123150638-123150738 1e-05 36_[+2]_46 chr16:88043220-88043320 1.1e-05 9_[+2]_73 chr8:104608012-104608112 1.3e-05 40_[+2]_42 chr12:11761845-11761945 1.3e-05 5_[+2]_77 chr5:95806980-95807080 1.3e-05 71_[-2]_11 chr8:31096488-31096588 1.3e-05 22_[-2]_60 chr7:11998784-11998884 1.3e-05 48_[+2]_34 chr2:163933792-163933892 1.3e-05 62_[-2]_20 chr5:66000497-66000597 1.3e-05 55_[-2]_27 chr3:152811453-152811553 1.3e-05 55_[-2]_27 chr15:27421013-27421113 1.4e-05 50_[+2]_32 chr3:76088265-76088365 1.4e-05 64_[+2]_18 chr9:19968012-19968112 1.5e-05 38_[-2]_44 chr14:44223999-44224099 1.6e-05 39_[-2]_43 chrX:106027132-106027232 1.6e-05 36_[-2]_46 chr9:118315414-118315514 1.6e-05 22_[+2]_60 chr15:66318388-66318488 1.6e-05 74_[-2]_8 chrX:27031328-27031428 1.8e-05 73_[+2]_9 chr20:6745286-6745386 1.8e-05 81_[-2]_1 chr1:220512059-220512159 2e-05 77_[-2]_5 chr7:12368714-12368814 2e-05 63_[-2]_19 chr13:32717799-32717899 2.1e-05 46_[+2]_36 chr7:146488758-146488858 2.1e-05 40_[+2]_42 chr13:104833594-10483369 2.3e-05 44_[-2]_38 chr3:173325590-173325690 2.3e-05 10_[-2]_72 chrX:45712370-45712470 3e-05 65_[+2]_17 chr7:70165210-70165310 3e-05 68_[+2]_14 chr2:144649395-144649495 3e-05 30_[-2]_52 chr6:158129461-158129561 3.2e-05 80_[-2]_2 chr3:112073764-112073864 3.2e-05 62_[-2]_20 chr6:62747388-62747488 3.7e-05 51_[-2]_31 chr2:178150879-178150979 4e-05 71_[-2]_11 chr3:66041930-66042030 4e-05 53_[-2]_29 chr15:71723183-71723283 4.3e-05 53_[+2]_29 chr6:87825195-87825295 4.7e-05 16_[-2]_66 chr6:68749039-68749139 4.7e-05 15_[-2]_67 chr18:26083615-26083715 5.4e-05 56_[-2]_26 chr1:157016894-157016994 6.2e-05 7_[-2]_75 chr3:181658408-181658508 6.7e-05 63_[+2]_19 chr16:25865554-25865654 6.7e-05 54_[+2]_28 chr1:242749335-242749435 8.2e-05 47_[-2]_35 chr4:25487861-25487961 0.00011 8_[+2]_74 chr5:64437912-64438012 0.00013 60_[+2]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HATTTRCATAAYAAWRGR MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HATTTRCATAAYAAWRGR width=18 seqs=131 chr1:30294500-30294600 ( 47) CATTTGCATAATAAAAGA 1 chr3:103852540-103852640 ( 58) CATTTGCATAATAAAAGG 1 chr18:38477888-38477988 ( 66) CATTTGCATAATAAAGGG 1 chr6:154664951-154665051 ( 19) CATTTGCATATTAAAAGA 1 chr15:68145885-68145985 ( 72) CATCTGCATAATAAAAGA 1 chrX:14377842-14377942 ( 56) CATCTGCATAATAAAGGA 1 chr16:16064876-16064976 ( 55) CATTTGCATATTAAAAGG 1 chr3:59581605-59581705 ( 39) CATTTGCATAATAATGGC 1 chr1:178235692-178235792 ( 42) CATTTGCATATTAAAAGG 1 chr18:77766741-77766841 ( 68) GATTTGCATAATAAAAGG 1 chr1:64857819-64857919 ( 12) CATTAGCATAAGAAAAGG 1 chr17:25672483-25672583 ( 83) CATCTACATAATAAAAGA 1 chr1:237402443-237402543 ( 60) CATCTACATAATAAAAGA 1 chr7:22842226-22842326 ( 6) TATTTGCATAAGAATAGG 1 chr2:240213426-240213526 ( 54) CATTTGCATGAAAATAGA 1 chr11:9540448-9540548 ( 7) AATTTACATAACAATGAA 1 chr17:78127961-78128061 ( 17) CATTTACATAACAAGGGC 1 chr6:164765800-164765900 ( 4) CATTTACATTTCAATGGA 1 chr5:119951977-119952077 ( 73) AATCTACATGACAAAGGA 1 chr19:35694208-35694308 ( 50) CATCTGCATAACAAGGGC 1 chr17:42588811-42588911 ( 11) CATTTACATATCAAAGGT 1 chr1:43079252-43079352 ( 22) TATTAGCATGATAAAAGA 1 chr18:57531349-57531449 ( 46) CATCTACATAACAATGCA 1 chr5:109392509-109392609 ( 5) GATTTGCATTTGAAAAGG 1 chr3:54675152-54675252 ( 43) CATCTACATAACAAAACC 1 chr18:70111918-70112018 ( 22) TATATGCATTTCAAAAGA 1 chr1:239225078-239225178 ( 14) TTTTTACATAACAATAGC 1 chr8:72928396-72928496 ( 40) CATTAGCATACTAAAGGA 1 chr17:2777436-2777536 ( 9) CATTTGCATTTAAATGGG 1 chr3:78396319-78396419 ( 70) AATTTACATATTAATGAA 1 chr18:54653989-54654089 ( 14) TGTTTGCATAACAATAGG 1 chr4:27892317-27892417 ( 25) AATTTGCATAAATAAAGA 1 chr2:214552731-214552831 ( 38) AATTTGCATATGTAAAGA 1 chr3:181433493-181433593 ( 48) TATATGCATTACAATGGC 1 chr4:65460537-65460637 ( 53) CATCTACATGATAAAAAA 1 chr12:74024278-74024378 ( 8) TTTTTGCATGACAAAAAA 1 chr1:227544191-227544291 ( 74) AATTTACATGACCATAGA 1 chr9:38214427-38214527 ( 15) GATTTGCATTAGAAAGAG 1 chr3:66623256-66623356 ( 73) GCTCTACATAACAAAGGG 1 chr12:77266118-77266218 ( 53) CATTTGCATACTAAAAAG 1 chr1:96940833-96940933 ( 34) GATTTACATCTCAAAGGG 1 chr16:25866387-25866487 ( 77) CATCTACATAACAAGAAC 1 chr1:97025213-97025313 ( 76) CTTATGAATAACAAAAGA 1 chr1:241176011-241176111 ( 50) CATCTGCATAACAAGATA 1 chr7:70937920-70938020 ( 71) CATCTACATAACAAGAAC 1 chr3:16852056-16852156 ( 78) CATTTGCATCAGAATAGT 1 chr10:114813790-11481389 ( 35) GATTTGCATCACAATGAG 1 chr11:76622241-76622341 ( 65) CATTAGCATGCGAAAAGA 1 chr5:159593226-159593326 ( 80) GATTAGCATGAGAAGAGA 1 chr9:36560739-36560839 ( 25) CATTAGCATGCTAAAGGA 1 chr9:75830104-75830204 ( 71) GCTTAGCATAAGAAAGGG 1 chr1:213083220-213083320 ( 2) ATTTTACATAAGAATAAA 1 chr6:47702807-47702907 ( 67) ATTTTACATGTGAAAAGA 1 chr12:64793970-64794070 ( 28) GATTTGAATAATAATAAA 1 chr18:76741563-76741663 ( 60) CATTTCCATGACAAAAAG 1 chr7:68569093-68569193 ( 32) ATTATGAATAACAAAAGA 1 chr3:66983755-66983855 ( 51) AATCTACATCATAAAGGG 1 chr2:6054025-6054125 ( 26) GATTTGAATTTGAAAAGA 1 chr12:94135638-94135738 ( 70) TCTTTGCATTAAAATAGA 1 chr8:104636276-104636376 ( 37) GATTAGCATTTGAAAGGC 1 chrX:139607562-139607662 ( 44) AATTTACATGTCAACAGA 1 chr11:40224844-40224944 ( 31) TTTTTGCATTTGAATGGA 1 chr6:57639117-57639217 ( 38) CATCAAAATAACAATGGC 1 chr8:139199794-139199894 ( 32) TTTATGAATAACAAAAGA 1 chr1:247987384-247987484 ( 81) CATTTGCATAACAAGATT 1 chrX:151809753-151809853 ( 23) TTTATGCATATGAATAGA 1 chr10:85519896-85519996 ( 70) AATTTACATCTCAAAGAC 1 chr17:65141545-65141645 ( 52) CATTTACATGTAAATAGT 1 chr5:150767555-150767655 ( 67) CATCTGCATGATAAGAAC 1 chr4:5200728-5200828 ( 21) CATATTCATTACAATAGG 1 chr3:2346215-2346315 ( 52) CACATACATTACAATGGA 1 chr4:23934648-23934748 ( 70) CTCTTGAATAACAAAGGA 1 chrX:112643610-112643710 ( 9) TCTATGAATAACAATAGA 1 chr4:95818071-95818171 ( 23) TATTTACATATGCAAAGC 1 chr19:35559813-35559913 ( 15) AATAACCATAACAATGGG 1 chr18:58160363-58160463 ( 10) AATCAGCATGAGAATGCA 1 chr13:72303598-72303698 ( 13) TCTATGCATAACAATGAC 1 chr2:176708944-176709044 ( 37) AATTCACATAACAAAGAG 1 chr18:36510979-36511079 ( 63) GTTTTGAATTTCAATAGA 1 chr16:63071778-63071878 ( 74) GATTAAAATGACAAAGAA 1 chr6:78901889-78901989 ( 5) AACTTACATTTGAAAGGG 1 chr6:164899214-164899314 ( 43) ACTCAGAATAATAAAGGA 1 chr6:98484232-98484332 ( 19) CATTATCATGTTAATGGA 1 chr3:137486501-137486601 ( 14) ACTTAGCATTACAAAACC 1 chr1:178235363-178235463 ( 12) ATTTAACATGTAAAAAGA 1 chr14:97492029-97492129 ( 31) GATTTGCATAACTAAACT 1 chr2:85685949-85686049 ( 44) AATTAACATAACAACAAC 1 chr13:88150794-88150894 ( 80) TCTCTGAATAACAAAACA 1 chr6:123150638-123150738 ( 37) GCTATGAATAACAAAAAA 1 chr16:88043220-88043320 ( 10) CATTAGAATAAGAAGGAC 1 chr8:104608012-104608112 ( 41) AATTAACATACCAAGAAG 1 chr12:11761845-11761945 ( 6) AATTTACATTTATAAAGG 1 chr5:95806980-95807080 ( 72) TTTTTACATAAAAATGCG 1 chr8:31096488-31096588 ( 23) ATTTATCATGACAAAAGG 1 chr7:11998784-11998884 ( 49) AATTTACATTTATAAAGG 1 chr2:163933792-163933892 ( 63) AATTACCATTTCAAAGAA 1 chr5:66000497-66000597 ( 56) TTCTTACATATGAAAAGA 1 chr3:152811453-152811553 ( 56) TATCTGCATCTCAATACC 1 chr15:27421013-27421113 ( 51) CATTTGAATGCTAATGAA 1 chr3:76088265-76088365 ( 65) ACCTTGCATTTGAAAAGA 1 chr9:19968012-19968112 ( 39) AGTTAGCATAACAAAGAT 1 chr14:44223999-44224099 ( 40) CATTAGAATAAAAAGGCA 1 chrX:106027132-106027232 ( 37) AATATACATATGAATTGA 1 chr9:118315414-118315514 ( 23) TATCTTAATAACAATGGC 1 chr15:66318388-66318488 ( 75) AATTTGCATTTTAACAAG 1 chrX:27031328-27031428 ( 74) TATTTACATAAATATGCA 1 chr20:6745286-6745386 ( 82) AATCAACATTAAAATAGT 1 chr1:220512059-220512159 ( 78) AATTTACATTTGCAAAAG 1 chr7:12368714-12368814 ( 64) CTTAAGAATAACAAAGCA 1 chr13:32717799-32717899 ( 47) CTTCTACATAATAATACT 1 chr7:146488758-146488858 ( 41) AATTTAAATTCAAATAGA 1 chr13:104833594-10483369 ( 45) CATCTGCATAACCTTAGC 1 chr3:173325590-173325690 ( 11) TCCATACATAATAAAAGA 1 chrX:45712370-45712470 ( 66) GATCATCATAATAAAAGT 1 chr7:70165210-70165310 ( 69) AACATGAATGACAAGAGA 1 chr2:144649395-144649495 ( 31) AATTAGCATAATTAAGTC 1 chr6:158129461-158129561 ( 81) AGTTTAAATGATAATAGC 1 chr3:112073764-112073864 ( 63) GATAGGCATAATAATGGC 1 chr6:62747388-62747488 ( 52) TTTTAGCATCACTATAGG 1 chr2:178150879-178150979 ( 72) ACTTAACATTTCAATGTA 1 chr3:66041930-66042030 ( 54) GTTATGAATGACAATGCA 1 chr15:71723183-71723283 ( 54) CATTACCATAAAATAAGA 1 chr6:87825195-87825295 ( 17) TATGTGCATATTCAAGGA 1 chr6:68749039-68749139 ( 16) AATCTGCATCACAAGTAA 1 chr18:26083615-26083715 ( 57) AATTTGCATATGCATATT 1 chr1:157016894-157016994 ( 8) AATTTACATATACATATC 1 chr3:181658408-181658508 ( 64) TATCTCCATAACAATTAG 1 chr16:25865554-25865654 ( 55) AATTAGCATATAATGAGC 1 chr1:242749335-242749435 ( 48) TATAAAAATAACCATGAA 1 chr4:25487861-25487961 ( 9) TGTACGCATTACAATAGG 1 chr5:64437912-64438012 ( 61) GATATACATATATATATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HATTTRCATAAYAAWRGR MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 18 n= 49302 bayes= 10.5616 E= 1.0e-134 11 70 -58 -51 137 -124 -283 -97 -1368 -202 -1368 174 -82 -7 -482 114 -21 -383 -482 137 37 -250 136 -289 -69 193 -1368 -1368 182 -1368 -1368 -1368 -1368 -1368 -1368 182 101 -183 -30 -57 119 -202 -1368 7 -113 103 -24 -21 162 -183 -1368 -204 179 -1368 -1368 -363 79 -324 -102 43 107 -1368 82 -363 -36 -113 153 -241 79 -18 17 -189 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HATTTRCATAAYAAWRGR MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 18 nsites= 131 E= 1.0e-134 0.305344 0.351145 0.145038 0.198473 0.732824 0.091603 0.030534 0.145038 0.000000 0.053435 0.000000 0.946565 0.160305 0.206107 0.007634 0.625954 0.244275 0.015267 0.007634 0.732824 0.366412 0.038168 0.557252 0.038168 0.175573 0.824427 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.572519 0.061069 0.175573 0.190840 0.648855 0.053435 0.000000 0.297710 0.129771 0.442748 0.183206 0.244275 0.870229 0.061069 0.000000 0.068702 0.977099 0.000000 0.000000 0.022901 0.488550 0.022901 0.106870 0.381679 0.595420 0.000000 0.381679 0.022901 0.221374 0.099237 0.625954 0.053435 0.488550 0.190840 0.244275 0.076336 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HATTTRCATAAYAAWRGR MEME-2 regular expression -------------------------------------------------------------------------------- [CA]AT[TC][TA][GA]CATA[AT][CT]AA[AT][AG][GA][AG] -------------------------------------------------------------------------------- Time 618.32 secs. ******************************************************************************** ******************************************************************************** MOTIF TGGTTKGACCAGGTRTGYCATTTRCATAGC MEME-3 width = 30 sites = 10 llr = 298 E-value = 7.6e-034 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGGTTKGACCAGGTRTGYCATTTRCATAGC MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::1218::a:1:3::1:8:::5:8:a11 pos.-specific C :1::1:::a8:::2:::58:::3:9::::7 probability G 299:1591:::a9:5:a1:2:::5:2::9: matrix T 8:1a73:1:2:::82a:32:aa7:1:a::2 bits 2.2 * * * 2.0 * * * 1.8 *** * * *** ** ** * *** 1.5 *** * * *** ** ** * *** Relative 1.3 *** * ***** ** * ** * *** Entropy 1.1 **** * ****** ** *********** (43.0 bits) 0.9 **** ******** ** ************ 0.7 **** ******** ** ************ 0.4 ****************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel TGGTTGGACCAGGTGTGCCATTTACATAGC consensus G T T CA TTG CG G T sequence A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTTKGACCAGGTRTGYCATTTRCATAGC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr1:237402443-237402543 + 1 5.11e-19 . tggttggaccaggtgtgccatttgcatagc acatgaagaa chr18:77766741-77766841 + 15 1.18e-18 cacagaggat tggttggaccaggtgtgccatttacatagc actggaagaa chr18:38477888-38477988 + 7 8.89e-17 ggggac tggtttgaccaggtgtgtcattcacatagc ccatgaaaag chr12:131432640-13143274 - 25 5.44e-16 TGTAGTGGAT TGGTTGGACCAGATATGCCATTTACATAGC CCGGAAGAGG chr16:11730077-11730177 + 18 2.15e-15 gcatgaagat tggtcagaccaggtgtgctatttgcatagc acgtgaagaa chr6:154664951-154665051 - 66 3.28e-14 GGGAT TGGTTTGACTAGGCATGTCATTCACGTAGC CTGCACAAAA chr3:176223662-176223762 + 22 3.87e-14 cccaggggat tggtttgaccaggtttgtcattcatgtagc ctgcggcggg chr17:25672483-25672583 + 24 3.74e-13 cctgagcgat tggttaagccaggtgtgacgtttgcatagt gcgtgaaaaa chr15:68145885-68145985 + 13 7.76e-13 atgaaaaagt ggttaggactaggtatgctatttgcatagt gtgtaaaagt chr15:89950631-89950731 - 67 1.61e-11 CTCA GCGTGGGTCCAGGCTTGGCGTTTGCATAAA TGCTGCCTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTTKGACCAGGTRTGYCATTTRCATAGC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:237402443-237402543 5.1e-19 [+3]_70 chr18:77766741-77766841 1.2e-18 14_[+3]_56 chr18:38477888-38477988 8.9e-17 6_[+3]_64 chr12:131432640-13143274 5.4e-16 24_[-3]_46 chr16:11730077-11730177 2.2e-15 17_[+3]_53 chr6:154664951-154665051 3.3e-14 65_[-3]_5 chr3:176223662-176223762 3.9e-14 21_[+3]_49 chr17:25672483-25672583 3.7e-13 23_[+3]_47 chr15:68145885-68145985 7.8e-13 12_[+3]_58 chr15:89950631-89950731 1.6e-11 66_[-3]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTTKGACCAGGTRTGYCATTTRCATAGC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGGTTKGACCAGGTRTGYCATTTRCATAGC width=30 seqs=10 chr1:237402443-237402543 ( 1) TGGTTGGACCAGGTGTGCCATTTGCATAGC 1 chr18:77766741-77766841 ( 15) TGGTTGGACCAGGTGTGCCATTTACATAGC 1 chr18:38477888-38477988 ( 7) TGGTTTGACCAGGTGTGTCATTCACATAGC 1 chr12:131432640-13143274 ( 25) TGGTTGGACCAGATATGCCATTTACATAGC 1 chr16:11730077-11730177 ( 18) TGGTCAGACCAGGTGTGCTATTTGCATAGC 1 chr6:154664951-154665051 ( 66) TGGTTTGACTAGGCATGTCATTCACGTAGC 1 chr3:176223662-176223762 ( 22) TGGTTTGACCAGGTTTGTCATTCATGTAGC 1 chr17:25672483-25672583 ( 24) TGGTTAAGCCAGGTGTGACGTTTGCATAGT 1 chr15:68145885-68145985 ( 13) GGTTAGGACTAGGTATGCTATTTGCATAGT 1 chr15:89950631-89950731 ( 67) GCGTGGGTCCAGGCTTGGCGTTTGCATAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTTKGACCAGGTRTGYCATTTRCATAGC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42174 bayes= 12.9854 E= 7.6e-034 -997 -997 -11 150 -997 -111 205 -997 -997 -997 205 -150 -997 -997 -997 182 -150 -111 -111 130 -50 -997 121 8 -150 -997 205 -997 150 -997 -111 -150 -997 221 -997 -997 -997 188 -997 -50 182 -997 -997 -997 -997 -997 221 -997 -150 -997 205 -997 -997 -11 -997 150 8 -997 121 -50 -997 -997 -997 182 -997 -997 221 -997 -150 121 -111 8 -997 188 -997 -50 150 -997 -11 -997 -997 -997 -997 182 -997 -997 -997 182 -997 47 -997 130 82 -997 121 -997 -997 205 -997 -150 150 -997 -11 -997 -997 -997 -997 182 182 -997 -997 -997 -150 -997 205 -997 -150 169 -997 -50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTTKGACCAGGTRTGYCATTTRCATAGC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 10 E= 7.6e-034 0.000000 0.000000 0.200000 0.800000 0.000000 0.100000 0.900000 0.000000 0.000000 0.000000 0.900000 0.100000 0.000000 0.000000 0.000000 1.000000 0.100000 0.100000 0.100000 0.700000 0.200000 0.000000 0.500000 0.300000 0.100000 0.000000 0.900000 0.000000 0.800000 0.000000 0.100000 0.100000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.000000 0.200000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.100000 0.000000 0.900000 0.000000 0.000000 0.200000 0.000000 0.800000 0.300000 0.000000 0.500000 0.200000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.100000 0.500000 0.100000 0.300000 0.000000 0.800000 0.000000 0.200000 0.800000 0.000000 0.200000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.300000 0.000000 0.700000 0.500000 0.000000 0.500000 0.000000 0.000000 0.900000 0.000000 0.100000 0.800000 0.000000 0.200000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.100000 0.000000 0.900000 0.000000 0.100000 0.700000 0.000000 0.200000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTTKGACCAGGTRTGYCATTTRCATAGC MEME-3 regular expression -------------------------------------------------------------------------------- [TG]GGTT[GTA]GAC[CT]AGG[TC][GAT]TG[CT][CT][AG]TT[TC][AG]C[AG]TAG[CT] -------------------------------------------------------------------------------- Time 881.22 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:101251083-101251183 7.24e-02 100 chr21:35014106-35014206 8.71e-01 100 chr7:126747661-126747761 7.05e-07 10_[+1(5.39e-11)]_72 chr17:42588811-42588911 9.32e-04 10_[-2(1.36e-07)]_72 chr3:173325590-173325690 2.27e-02 10_[-2(2.31e-05)]_72 chr10:111934091-11193419 3.30e-01 100 chr13:100800646-10080074 8.67e-01 100 chrX:42851598-42851698 4.06e-01 100 chr6:101844277-101844377 3.61e-01 100 chr18:36510979-36511079 4.83e-03 62_[+2(5.81e-06)]_20 chr17:78127961-78128061 4.24e-05 16_[-2(5.79e-08)]_66 chr3:186683038-186683138 6.73e-01 100 chr12:131334576-13133467 1.06e-01 100 chr11:30581924-30582024 6.04e-01 100 chr9:29325709-29325809 9.44e-01 100 chr12:42878006-42878106 2.01e-01 100 chr3:38847013-38847113 2.80e-01 100 chr1:37486083-37486183 2.53e-06 18_[+1(2.78e-05)]_1_[+1(9.87e-11)]_\ 45 chr6:68788894-68788994 4.95e-01 100 chr12:24368696-24368796 5.23e-01 100 chr4:126636017-126636117 2.34e-01 100 chr13:63795735-63795835 3.70e-01 100 chr10:15514963-15515063 9.47e-02 56_[-1(6.16e-05)]_26 chr3:187183282-187183382 2.88e-01 100 chr9:120821854-120821954 4.17e-06 41_[+1(6.43e-10)]_41 chr17:63057769-63057869 2.09e-01 100 chr8:142970680-142970780 5.73e-02 100 chr3:66623256-66623356 5.43e-03 3_[+2(9.36e-05)]_51_[-2(8.07e-07)]_\ 10 chr19:35694208-35694308 2.01e-04 49_[-2(8.22e-08)]_33 chr8:32579222-32579322 5.96e-01 100 chr5:129502046-129502146 9.13e-01 100 chr14:30194302-30194402 9.62e-02 100 chr9:75830104-75830204 7.70e-03 70_[-2(1.34e-06)]_12 chr10:34817259-34817359 9.57e-01 100 chr1:202536535-202536635 5.65e-03 100 chr8:123092015-123092115 6.15e-02 100 chr12:108835923-10883602 4.85e-01 100 chr6:106201447-106201547 5.01e-01 100 chr16:30703792-30703892 2.41e-02 100 chr4:25487861-25487961 1.13e-03 56_[+3(4.14e-05)]_14 chr20:50414456-50414556 8.58e-01 100 chr22:36232432-36232532 8.93e-02 100 chr1:68742076-68742176 5.55e-01 100 chr21:16614604-16614704 9.67e-01 100 chr4:65460537-65460637 2.58e-03 52_[+2(7.06e-07)]_30 chr5:151642201-151642301 2.31e-01 100 chr6:154664951-154665051 2.60e-15 18_[+2(5.48e-09)]_29_[-3(3.28e-14)]_\ 5 chr6:89440359-89440459 8.58e-02 100 chr17:26499856-26499956 3.91e-01 100 chrX:151809753-151809853 1.15e-02 22_[+2(3.06e-06)]_60 chr5:109173798-109173898 7.58e-01 100 chr12:51611669-51611769 7.13e-02 100 chr8:103918481-103918581 9.77e-01 100 chr5:1409421-1409521 9.83e-01 100 chr18:76741563-76741663 8.12e-03 59_[-2(1.52e-06)]_23 chr3:181433493-181433593 4.26e-05 47_[-2(7.06e-07)]_35 chr2:184274479-184274579 1.22e-01 100 chr15:86780054-86780154 7.90e-01 100 chr9:13491985-13492085 2.64e-01 100 chr15:52688384-52688484 3.25e-01 100 chr3:115577797-115577897 4.89e-01 100 chr4:34180114-34180214 3.51e-01 100 chr3:187387429-187387529 7.68e-05 54_[-1(4.12e-09)]_10_[-1(2.35e-07)] chr2:44599021-44599121 1.95e-01 100 chr13:64913725-64913825 7.25e-02 100 chr1:178235363-178235463 1.76e-02 11_[-2(8.63e-06)]_71 chr1:61577303-61577403 5.70e-01 100 chr5:159593226-159593326 6.24e-03 79_[-2(1.19e-06)]_3 chr6:123150638-123150738 1.72e-02 36_[+2(1.04e-05)]_46 chr4:91751935-91752035 4.35e-01 100 chr4:111394167-111394267 6.51e-01 100 chr18:8006226-8006326 2.45e-01 100 chr2:51259600-51259700 7.32e-02 100 chr3:156035574-156035674 8.02e-01 100 chr4:66501096-66501196 7.58e-01 100 chr9:133060949-133061049 1.79e-06 31_[-1(1.32e-10)]_51 chr13:53480401-53480501 4.60e-01 100 chr3:76088265-76088365 4.57e-02 64_[+2(1.38e-05)]_18 chr1:175694842-175694942 2.74e-05 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******************************************************************************** CPU: surya.stanford.edu ********************************************************************************