******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= cutnotseq_memechip_out/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr1:107678123-107678223 1.0000 100 chr20:5892250-5892350 1.0000 100 chr7:100937493-100937593 1.0000 100 chr17:32059255-32059355 1.0000 100 chr3:106173152-106173252 1.0000 100 chr10:114571775-11457187 1.0000 100 chr13:100340117-10034021 1.0000 100 chrX:50357311-50357411 1.0000 100 chr5:54920928-54921028 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chr3:162439524-162439624 1.0000 100 chr1:175028692-175028792 1.0000 100 chr16:66087943-66088043 1.0000 100 chr16:88627172-88627272 1.0000 100 chr21:34734586-34734686 1.0000 100 chr6:41934229-41934329 1.0000 100 chr2:213401000-213401100 1.0000 100 chr2:156584046-156584146 1.0000 100 chr1:45956854-45956954 1.0000 100 chr9:34430770-34430870 1.0000 100 chr1:209304394-209304494 1.0000 100 chr9:134674573-134674673 1.0000 100 chr4:5363738-5363838 1.0000 100 chr2:125086008-125086108 1.0000 100 chr16:11735302-11735402 1.0000 100 chr11:74925402-74925502 1.0000 100 chr12:92535707-92535807 1.0000 100 chr2:84532074-84532174 1.0000 100 chr16:26408178-26408278 1.0000 100 chr11:94390103-94390203 1.0000 100 chr8:57357869-57357969 1.0000 100 chr5:125758720-125758820 1.0000 100 chr15:71655903-71656003 1.0000 100 chr19:6767578-6767678 1.0000 100 chr8:20363883-20363983 1.0000 100 chr6:99235805-99235905 1.0000 100 chr12:76337936-76338036 1.0000 100 chr16:25865554-25865654 1.0000 100 chr4:65460537-65460637 1.0000 100 chr8:22399262-22399362 1.0000 100 chr9:109697230-109697330 1.0000 100 chr8:72131152-72131252 1.0000 100 chr4:87987808-87987908 1.0000 100 chr19:18314882-18314982 1.0000 100 chr22:43845163-43845263 1.0000 100 chr19:17799029-17799129 1.0000 100 chr1:36342641-36342741 1.0000 100 chr6:26251486-26251586 1.0000 100 chr4:157935976-157936076 1.0000 100 chr3:78774088-78774188 1.0000 100 chr2:180357736-180357836 1.0000 100 chr10:26656786-26656886 1.0000 100 chr7:131055414-131055514 1.0000 100 chr11:83196185-83196285 1.0000 100 chr7:26775613-26775713 1.0000 100 chr1:160641832-160641932 1.0000 100 chr6:34100355-34100455 1.0000 100 chr10:88616889-88616989 1.0000 100 chr20:36201313-36201413 1.0000 100 chr9:36560739-36560839 1.0000 100 chr12:66155132-66155232 1.0000 100 chr6:157112487-157112587 1.0000 100 chr3:142585507-142585607 1.0000 100 chr1:11695894-11695994 1.0000 100 chr3:133292080-133292180 1.0000 100 chr18:59283426-59283526 1.0000 100 chr6:118227959-118228059 1.0000 100 chr15:53150033-53150133 1.0000 100 chr3:150317338-150317438 1.0000 100 chr6:4893936-4894036 1.0000 100 chr14:99947435-99947535 1.0000 100 chr11:17568493-17568593 1.0000 100 chr19:5404057-5404157 1.0000 100 chr2:29516713-29516813 1.0000 100 chr10:59935819-59935919 1.0000 100 chr15:26965668-26965768 1.0000 100 chr3:63053348-63053448 1.0000 100 chr1:102462485-102462585 1.0000 100 chr6:107922314-107922414 1.0000 100 chr2:63973770-63973870 1.0000 100 chr8:135533466-135533566 1.0000 100 chr13:83790618-83790718 1.0000 100 chr3:185911920-185912020 1.0000 100 chr12:9063743-9063843 1.0000 100 chr3:184617999-184618099 1.0000 100 chr10:71327624-71327724 1.0000 100 chr6:8552346-8552446 1.0000 100 chr6:121940951-121941051 1.0000 100 chr18:40323825-40323925 1.0000 100 chr11:31259990-31260090 1.0000 100 chr3:192162567-192162667 1.0000 100 chr13:100448506-10044860 1.0000 100 chr5:95767998-95768098 1.0000 100 chr8:51364746-51364846 1.0000 100 chr6:160661234-160661334 1.0000 100 chr9:7052675-7052775 1.0000 100 chr11:66185490-66185590 1.0000 100 chrX:91365466-91365566 1.0000 100 chr13:89416391-89416491 1.0000 100 chr4:113261241-113261341 1.0000 100 chr9:128640723-128640823 1.0000 100 chr6:158889185-158889285 1.0000 100 chr14:57692733-57692833 1.0000 100 chr3:120626757-120626857 1.0000 100 chrX:123364566-123364666 1.0000 100 chr19:47164607-47164707 1.0000 100 chr20:10332948-10333048 1.0000 100 chr12:90277062-90277162 1.0000 100 chr3:180473411-180473511 1.0000 100 chr6:111410579-111410679 1.0000 100 chr22:25271902-25272002 1.0000 100 chr12:85862637-85862737 1.0000 100 chr4:110107643-110107743 1.0000 100 chr2:206140866-206140966 1.0000 100 chr19:50528646-50528746 1.0000 100 chr20:1986514-1986614 1.0000 100 chr17:35088151-35088251 1.0000 100 chr2:208249646-208249746 1.0000 100 chr15:80681679-80681779 1.0000 100 chr20:25061621-25061721 1.0000 100 chr7:101580148-101580248 1.0000 100 chr4:40752935-40753035 1.0000 100 chr1:147012415-147012515 1.0000 100 chr7:112548190-112548290 1.0000 100 chr18:35144742-35144842 1.0000 100 chr6:4887598-4887698 1.0000 100 chr6:37665509-37665609 1.0000 100 chr3:144309617-144309717 1.0000 100 chr7:66644081-66644181 1.0000 100 chr12:66217628-66217728 1.0000 100 chr12:131432640-13143274 1.0000 100 chr2:72946443-72946543 1.0000 100 chr18:60467616-60467716 1.0000 100 chr18:13712512-13712612 1.0000 100 chr18:44077137-44077237 1.0000 100 chr5:152655726-152655826 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme cutnotseq_memechip_out/seqs-sampled -oc cutnotseq_memechip_out/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile cutnotseq_memechip_out/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 588 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58800 N= 588 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.279 C 0.221 G 0.221 T 0.279 Background letter frequencies (from cutnotseq_memechip_out/background): A 0.278 C 0.222 G 0.222 T 0.278 ******************************************************************************** ******************************************************************************** MOTIF GGHGCTGTCCATGGTGCTGAA MEME-1 width = 21 sites = 69 llr = 1377 E-value = 4.8e-300 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGHGCTGTCCATGGTGCTGAA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1142::::::52:::1:::97 pos.-specific C :231a:2:aa11:::2a:::2 probability G 86:7::8:::219a:7::a1: matrix T 1131:a:a::16::a1:a::1 bits 2.2 * * 2.0 * ** * * * 1.7 ** ** *** *** 1.5 ****** *** *** Relative 1.3 * ****** *** **** Entropy 1.1 * ****** *** **** (28.8 bits) 0.9 * ******* *** **** 0.7 * ******* ********* 0.4 ** ******* ********** 0.2 ********************* 0.0 --------------------- Multilevel GGAGCTGTCCATGGTGCTGAA consensus C GA sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGHGCTGTCCATGGTGCTGAA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chr16:1238741-1238841 - 60 2.32e-12 TGCTGCAGCG GCTGCTGTCCATGGTGCTGAA TCAGCAGCCT chr16:10989214-10989314 - 80 5.88e-12 . GGAGCTGTCCGTGGTGCTGAC GGGAGGGCAG chr22:43845163-43845263 - 30 7.38e-12 GGGGGGGGTT GGCACTGTCCGTGGTGCTGAA GATATGGCGG chr6:96564354-96564454 + 62 8.34e-12 aaaggggggt ggaactgtccgtggtgctgaa aaaattactg chr11:74925402-74925502 - 52 9.23e-12 TAATGGGTTG GGCGCTGTCCAAGGTGCTGAC ATCTTCACTT chr17:78414878-78414978 + 53 1.08e-11 GAAGTGTGCT GCCGCTGTCCTTGGTGCTGAA GTCAAGGCTG chr7:100701690-100701790 - 46 1.08e-11 GCGGGTCGAG GGCGCTGTCCATGGTACTGAA CCCGGGCAGA chr1:30209478-30209578 + 34 1.73e-11 CAAGAAGGCA GGCTCTGTCCATGGTGCTGAA TGGAATCCTT chr14:77675006-77675106 + 67 1.73e-11 TGCCCAGCAT GGTGCTGTCCATGGTGCTGAG AGCCCAGCTG chr5:174749027-174749127 - 17 2.30e-11 GCTGTACCTT GGAACTGTCCTTGGTGCTGAA ACAGACACAA chr9:136474521-136474621 + 4 2.30e-11 TGG GGAGCTGTCCCTGGTGCTGAC GGCTCGTCCG chr12:111649996-11165009 - 67 2.72e-11 AGCGGAAACA GGTGCTCTCCAAGGTGCTGAA ACCAATTCTT chr13:100448506-10044860 + 41 3.16e-11 GCCAGGCTGT GGAGCTGACCATGGTGCTGAA GATGATCTGA chr18:44077137-44077237 + 34 4.56e-11 GGAGTGGTTT AGAGCTGTCCACGGTGCTGAA CCCGCCTCTT chr20:43408790-43408890 + 67 4.56e-11 GGCGTGTGCA GGAACTGTCCGTGGTGCTGAC TGAGCACAGA chr5:152655726-152655826 - 42 5.17e-11 AACTGTCCGG GATGCTGTCCATGGTCCTGAA CTTCTGCCAT chr1:44434035-44434135 - 73 5.17e-11 TAGGTCA GGAGCTGTCCCTGGTGCTGAT TGATCCCTGA chr22:25589543-25589643 - 49 5.87e-11 CAGCCCTGCA GTTGCTGTCCCTGGTGCTGAA CAGCAACTGC chr17:6207088-6207188 - 27 5.87e-11 CTAGGTGCTG GGTGCTGTCCCGGGTGCTGAA AAGTCAAAGA chr3:123936416-123936516 - 54 6.49e-11 GGACATGTAT GCCGCTGTCCTTGGTCCTGAA CTAGTGTGAC chr4:5363738-5363838 + 70 7.32e-11 TTGGGAGCGA GGAACTCTCCGTGGTGCTGAA AATAGACATT chr6:34083118-34083218 - 42 7.32e-11 ACCCCTGGAG GCTGCTGTCCAAGGTCCTGAA CCAGGACCTT chr19:4173032-4173132 - 45 7.32e-11 TCCGCCCGCC GCCGCTCTCCAAGGTGCTGAA GTCGTGCCCG chr20:9640962-9641062 + 8 8.17e-11 gaagccg ggcactgtccatggtactgaa gacgcaatag chr3:158991478-158991578 - 18 1.04e-10 CACGCTGCCC GGACCTCTCCATGGTGCTGAA GAGTTACTCT chr19:34258812-34258912 + 31 1.32e-10 GAGCGCTGAT GGAGCTGTCCAGGGTCCTGAC GTGCAGCCCA chr1:18582820-18582920 + 57 1.50e-10 GCTAGCCCTG AGAGCTGTCCGTGGTGCTGAT AGTTCCCGTG chr20:44669306-44669406 + 70 1.50e-10 GGCCCCCGAG ACCGCTGTCCACGGTGCTGAA ACACAGCATT chr19:15126748-15126848 + 68 1.50e-10 GGACTGGTGG AACGCTGTCCGTGGTGCTGAA CTGGACAGCT chr1:166038695-166038795 - 38 1.66e-10 AAGCCTCCTT GGAACTGTCCAAGGTGCTGAT GTGAACTAAC chr19:5404057-5404157 + 61 2.07e-10 CCAGGGCTGT GTCGCTGTCCGTGGTACTGAA CGGTGCTGGT chr6:34100355-34100455 - 30 2.07e-10 CCAGCCTTGT GGCGCTGACCGAGGTGCTGAA ACAGCACCTG chr10:26656786-26656886 - 25 2.29e-10 GGGCCCGTGT GCCCCTGTCCTTGGTGCTGAA CCATCCCTTC chr9:34493990-34494090 - 33 2.55e-10 AGCAGCCATG GGAACTCTCCGAGGTGCTGAA AACCAGCCCC chr6:24127052-24127152 - 25 2.80e-10 TGGCGCCCAA GGAGCTCTCCAAGGTTCTGAA AACATTTCTG chr12:101220144-10122024 + 52 3.09e-10 CAGCGTGTTG GGTGCTGTCCATGGTACTGGA CCAGCGTTGC chr18:76473130-76473230 + 46 3.09e-10 CCCCAAGTGT GCTGCTGTCCATGGTCCTGGA GGATTGTCGC chr1:11695894-11695994 + 44 3.43e-10 AGGCTGGCAG GGCGCTGTCCGCAGTGCTGAA GCGCCTCTCT chr17:10778599-10778699 + 56 3.43e-10 TTTGAGGCCA GGAGCTCTCCAAGGTGCTGGA GAGAGGCCCA chr10:73555012-73555112 - 53 3.76e-10 GGGACGTGGA GCAGCTCTCCATGGTCCTGAC CAACCCATGC chr20:47139683-47139783 + 14 3.76e-10 cactgagcac tgagctgtcctaggtgctgaa atgatttcat chr1:107678123-107678223 - 29 3.76e-10 TGGCCTGCTG GGAACTGTCCTTGGTGCTGGA GGAAATGCAA chr1:37609472-37609572 - 27 4.16e-10 TGTGTTGTCT GTCACTGTCCATGGTTCTGAA CCGGCACTAC chr9:34430770-34430870 + 33 5.06e-10 ACAAACAGGA GGAGCTCTCCAGGGTTCTGAA CCACCTCCCC chr16:23038133-23038233 - 26 5.06e-10 TGGCAGCATC TCTGCTGTCCACGGTGCTGAA TCTAACCAAC chr10:59935819-59935919 - 44 5.64e-10 AGATAGACAC AGTGCTGTCCTTGGTTCTGAA ACCACCATAC chr16:7232515-7232615 - 5 5.64e-10 AAATGAAAGA GATGCTGTCCAGGGTGCTGAT CCCT chr12:119304240-11930434 - 14 6.83e-10 ATAGATGCAA GGTGCTGTCCGAGGTGCTGCC CAAGGTACCA chr20:36201313-36201413 - 32 8.24e-10 TCTTCTGAGA GTTGCTGTCCCTGGTCCTGAC AGCTTCCCCT chr7:153752629-153752729 + 55 8.24e-10 TACTTCGGTG GGAGCTGTCTGAGGTGCTGAA ACCTTCTCTT chr2:166094641-166094741 - 26 9.02e-10 CTATTGCAGT AACGCTGTCCATGGTGCTGAG AACCAATTTT chr17:35054401-35054501 - 56 9.85e-10 CGGTGGTCTG AGAACTGTCCGTGGTTCTGAA GACCTATCCC chr22:25271902-25272002 - 38 1.17e-09 AGAGGGCACC TGCGCTGTCCATGGTCCTGAG GCTAAAGCTG chr10:71327624-71327724 - 72 1.17e-09 AGCTGCGC GCCCCTGACCATGGTGCTGAA ATGACCACGT chr22:26655545-26655645 + 31 1.17e-09 ACCCATGCGG GGTGCTGTCCGCTGTGCTGAA ATGCCATTGT chr14:96419518-96419618 - 51 1.27e-09 AGAAGCAATA GTCGCTGTCCTTGGTACTGAC TGGTAAAGGA chr1:38230001-38230101 - 18 1.51e-09 TGCTGATCAT GGAACTGTCCGCAGTGCTGAA TTCTGAGCGT chr12:119195300-11919540 + 65 1.79e-09 AGGGCAGTGG GTTTCTGTCCAAGGTGCTGAC TTTTTGGCGc chrY:16343621-16343721 - 39 1.95e-09 GGGACTGCTC TCTGCTGTCCCTGGTCCTGAA AGTTGAATAT chr11:7098388-7098488 - 32 2.71e-09 GTGGGCTCTC GGCGCTGTCCAGGGTCCTGCT TTCTCTGGTG chr16:26408178-26408278 + 37 2.94e-09 TTACACTTAA AGTTCTCTCCAAGGTGCTGAA ACTTGAAGCC chr12:108398219-10839831 - 52 2.94e-09 GGAAACACAT GTTGCTGTCCATGGTCCTAAA TAATCACTGA chr3:117041738-117041838 + 46 2.94e-09 CTATCTACAT GTTACTATCCATGGTGCTGAA TTATCTTGGG chr1:204806611-204806711 + 19 3.42e-09 GAAGGAGCTT GTCGCTGTCCAGAGTGCTGAC CTGACCTGAG chr3:191905281-191905381 - 41 3.97e-09 GCCTCTTCAG GAAGCTCTCCTTGGTCCTGAT TCTTATTCAA chr17:32883432-32883532 - 44 6.72e-09 CCAGCCACGA AACTCTGTCCATGGTTCTGAA CCGTCATACC chr7:154861581-154861681 - 20 1.17e-08 GCGCGGCTTT GGGGCTGTCCGCGGTGCTGCT GCGCTCCCCG chr3:34461369-34461469 + 38 2.23e-08 AGTGGGCTAG AACCTTGTCCATGGTGCTGAA TAGATGTGAT chr8:62200374-62200474 - 25 5.68e-08 ATGTATTTCT GCAGGTGTCCTCGCTGCTGAA CTGGGTGGGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGHGCTGTCCATGGTGCTGAA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:1238741-1238841 2.3e-12 59_[-1]_20 chr16:10989214-10989314 5.9e-12 79_[-1] chr22:43845163-43845263 7.4e-12 29_[-1]_50 chr6:96564354-96564454 8.3e-12 61_[+1]_18 chr11:74925402-74925502 9.2e-12 51_[-1]_28 chr17:78414878-78414978 1.1e-11 52_[+1]_27 chr7:100701690-100701790 1.1e-11 45_[-1]_34 chr1:30209478-30209578 1.7e-11 33_[+1]_46 chr14:77675006-77675106 1.7e-11 66_[+1]_13 chr5:174749027-174749127 2.3e-11 16_[-1]_63 chr9:136474521-136474621 2.3e-11 3_[+1]_76 chr12:111649996-11165009 2.7e-11 66_[-1]_13 chr13:100448506-10044860 3.2e-11 40_[+1]_39 chr18:44077137-44077237 4.6e-11 33_[+1]_46 chr20:43408790-43408890 4.6e-11 66_[+1]_13 chr5:152655726-152655826 5.2e-11 41_[-1]_38 chr1:44434035-44434135 5.2e-11 72_[-1]_7 chr22:25589543-25589643 5.9e-11 48_[-1]_31 chr17:6207088-6207188 5.9e-11 26_[-1]_53 chr3:123936416-123936516 6.5e-11 53_[-1]_26 chr4:5363738-5363838 7.3e-11 69_[+1]_10 chr6:34083118-34083218 7.3e-11 41_[-1]_38 chr19:4173032-4173132 7.3e-11 44_[-1]_35 chr20:9640962-9641062 8.2e-11 7_[+1]_72 chr3:158991478-158991578 1e-10 17_[-1]_62 chr19:34258812-34258912 1.3e-10 30_[+1]_49 chr1:18582820-18582920 1.5e-10 56_[+1]_23 chr20:44669306-44669406 1.5e-10 69_[+1]_10 chr19:15126748-15126848 1.5e-10 67_[+1]_12 chr1:166038695-166038795 1.7e-10 37_[-1]_42 chr19:5404057-5404157 2.1e-10 60_[+1]_19 chr6:34100355-34100455 2.1e-10 29_[-1]_50 chr10:26656786-26656886 2.3e-10 24_[-1]_55 chr9:34493990-34494090 2.6e-10 32_[-1]_47 chr6:24127052-24127152 2.8e-10 24_[-1]_55 chr12:101220144-10122024 3.1e-10 51_[+1]_28 chr18:76473130-76473230 3.1e-10 45_[+1]_34 chr1:11695894-11695994 3.4e-10 43_[+1]_36 chr17:10778599-10778699 3.4e-10 55_[+1]_24 chr10:73555012-73555112 3.8e-10 52_[-1]_27 chr20:47139683-47139783 3.8e-10 13_[+1]_66 chr1:107678123-107678223 3.8e-10 28_[-1]_51 chr1:37609472-37609572 4.2e-10 26_[-1]_53 chr9:34430770-34430870 5.1e-10 32_[+1]_47 chr16:23038133-23038233 5.1e-10 25_[-1]_54 chr10:59935819-59935919 5.6e-10 43_[-1]_36 chr16:7232515-7232615 5.6e-10 4_[-1]_75 chr12:119304240-11930434 6.8e-10 13_[-1]_66 chr20:36201313-36201413 8.2e-10 31_[-1]_48 chr7:153752629-153752729 8.2e-10 54_[+1]_25 chr2:166094641-166094741 9e-10 25_[-1]_54 chr17:35054401-35054501 9.8e-10 55_[-1]_24 chr22:25271902-25272002 1.2e-09 37_[-1]_42 chr10:71327624-71327724 1.2e-09 71_[-1]_8 chr22:26655545-26655645 1.2e-09 30_[+1]_49 chr14:96419518-96419618 1.3e-09 50_[-1]_29 chr1:38230001-38230101 1.5e-09 17_[-1]_62 chr12:119195300-11919540 1.8e-09 64_[+1]_15 chrY:16343621-16343721 2e-09 38_[-1]_41 chr11:7098388-7098488 2.7e-09 31_[-1]_48 chr16:26408178-26408278 2.9e-09 36_[+1]_43 chr12:108398219-10839831 2.9e-09 51_[-1]_28 chr3:117041738-117041838 2.9e-09 45_[+1]_34 chr1:204806611-204806711 3.4e-09 18_[+1]_61 chr3:191905281-191905381 4e-09 40_[-1]_39 chr17:32883432-32883532 6.7e-09 43_[-1]_36 chr7:154861581-154861681 1.2e-08 19_[-1]_60 chr3:34461369-34461469 2.2e-08 37_[+1]_42 chr8:62200374-62200474 5.7e-08 24_[-1]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGHGCTGTCCATGGTGCTGAA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGHGCTGTCCATGGTGCTGAA width=21 seqs=69 chr16:1238741-1238841 ( 60) GCTGCTGTCCATGGTGCTGAA 1 chr16:10989214-10989314 ( 80) GGAGCTGTCCGTGGTGCTGAC 1 chr22:43845163-43845263 ( 30) GGCACTGTCCGTGGTGCTGAA 1 chr6:96564354-96564454 ( 62) GGAACTGTCCGTGGTGCTGAA 1 chr11:74925402-74925502 ( 52) GGCGCTGTCCAAGGTGCTGAC 1 chr17:78414878-78414978 ( 53) GCCGCTGTCCTTGGTGCTGAA 1 chr7:100701690-100701790 ( 46) GGCGCTGTCCATGGTACTGAA 1 chr1:30209478-30209578 ( 34) GGCTCTGTCCATGGTGCTGAA 1 chr14:77675006-77675106 ( 67) GGTGCTGTCCATGGTGCTGAG 1 chr5:174749027-174749127 ( 17) GGAACTGTCCTTGGTGCTGAA 1 chr9:136474521-136474621 ( 4) GGAGCTGTCCCTGGTGCTGAC 1 chr12:111649996-11165009 ( 67) GGTGCTCTCCAAGGTGCTGAA 1 chr13:100448506-10044860 ( 41) GGAGCTGACCATGGTGCTGAA 1 chr18:44077137-44077237 ( 34) AGAGCTGTCCACGGTGCTGAA 1 chr20:43408790-43408890 ( 67) GGAACTGTCCGTGGTGCTGAC 1 chr5:152655726-152655826 ( 42) GATGCTGTCCATGGTCCTGAA 1 chr1:44434035-44434135 ( 73) GGAGCTGTCCCTGGTGCTGAT 1 chr22:25589543-25589643 ( 49) GTTGCTGTCCCTGGTGCTGAA 1 chr17:6207088-6207188 ( 27) GGTGCTGTCCCGGGTGCTGAA 1 chr3:123936416-123936516 ( 54) GCCGCTGTCCTTGGTCCTGAA 1 chr4:5363738-5363838 ( 70) GGAACTCTCCGTGGTGCTGAA 1 chr6:34083118-34083218 ( 42) GCTGCTGTCCAAGGTCCTGAA 1 chr19:4173032-4173132 ( 45) GCCGCTCTCCAAGGTGCTGAA 1 chr20:9640962-9641062 ( 8) GGCACTGTCCATGGTACTGAA 1 chr3:158991478-158991578 ( 18) GGACCTCTCCATGGTGCTGAA 1 chr19:34258812-34258912 ( 31) GGAGCTGTCCAGGGTCCTGAC 1 chr1:18582820-18582920 ( 57) AGAGCTGTCCGTGGTGCTGAT 1 chr20:44669306-44669406 ( 70) ACCGCTGTCCACGGTGCTGAA 1 chr19:15126748-15126848 ( 68) AACGCTGTCCGTGGTGCTGAA 1 chr1:166038695-166038795 ( 38) GGAACTGTCCAAGGTGCTGAT 1 chr19:5404057-5404157 ( 61) GTCGCTGTCCGTGGTACTGAA 1 chr6:34100355-34100455 ( 30) GGCGCTGACCGAGGTGCTGAA 1 chr10:26656786-26656886 ( 25) GCCCCTGTCCTTGGTGCTGAA 1 chr9:34493990-34494090 ( 33) GGAACTCTCCGAGGTGCTGAA 1 chr6:24127052-24127152 ( 25) GGAGCTCTCCAAGGTTCTGAA 1 chr12:101220144-10122024 ( 52) GGTGCTGTCCATGGTACTGGA 1 chr18:76473130-76473230 ( 46) GCTGCTGTCCATGGTCCTGGA 1 chr1:11695894-11695994 ( 44) GGCGCTGTCCGCAGTGCTGAA 1 chr17:10778599-10778699 ( 56) GGAGCTCTCCAAGGTGCTGGA 1 chr10:73555012-73555112 ( 53) GCAGCTCTCCATGGTCCTGAC 1 chr20:47139683-47139783 ( 14) TGAGCTGTCCTAGGTGCTGAA 1 chr1:107678123-107678223 ( 29) GGAACTGTCCTTGGTGCTGGA 1 chr1:37609472-37609572 ( 27) GTCACTGTCCATGGTTCTGAA 1 chr9:34430770-34430870 ( 33) GGAGCTCTCCAGGGTTCTGAA 1 chr16:23038133-23038233 ( 26) TCTGCTGTCCACGGTGCTGAA 1 chr10:59935819-59935919 ( 44) AGTGCTGTCCTTGGTTCTGAA 1 chr16:7232515-7232615 ( 5) GATGCTGTCCAGGGTGCTGAT 1 chr12:119304240-11930434 ( 14) GGTGCTGTCCGAGGTGCTGCC 1 chr20:36201313-36201413 ( 32) GTTGCTGTCCCTGGTCCTGAC 1 chr7:153752629-153752729 ( 55) GGAGCTGTCTGAGGTGCTGAA 1 chr2:166094641-166094741 ( 26) AACGCTGTCCATGGTGCTGAG 1 chr17:35054401-35054501 ( 56) AGAACTGTCCGTGGTTCTGAA 1 chr22:25271902-25272002 ( 38) TGCGCTGTCCATGGTCCTGAG 1 chr10:71327624-71327724 ( 72) GCCCCTGACCATGGTGCTGAA 1 chr22:26655545-26655645 ( 31) GGTGCTGTCCGCTGTGCTGAA 1 chr14:96419518-96419618 ( 51) GTCGCTGTCCTTGGTACTGAC 1 chr1:38230001-38230101 ( 18) GGAACTGTCCGCAGTGCTGAA 1 chr12:119195300-11919540 ( 65) GTTTCTGTCCAAGGTGCTGAC 1 chrY:16343621-16343721 ( 39) TCTGCTGTCCCTGGTCCTGAA 1 chr11:7098388-7098488 ( 32) GGCGCTGTCCAGGGTCCTGCT 1 chr16:26408178-26408278 ( 37) AGTTCTCTCCAAGGTGCTGAA 1 chr12:108398219-10839831 ( 52) GTTGCTGTCCATGGTCCTAAA 1 chr3:117041738-117041838 ( 46) GTTACTATCCATGGTGCTGAA 1 chr1:204806611-204806711 ( 19) GTCGCTGTCCAGAGTGCTGAC 1 chr3:191905281-191905381 ( 41) GAAGCTCTCCTTGGTCCTGAT 1 chr17:32883432-32883532 ( 44) AACTCTGTCCATGGTTCTGAA 1 chr7:154861581-154861681 ( 20) GGGGCTGTCCGCGGTGCTGCT 1 chr3:34461369-34461469 ( 38) AACCTTGTCCATGGTGCTGAA 1 chr8:62200374-62200474 ( 25) GCAGGTGTCCTCGCTGCTGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGHGCTGTCCATGGTGCTGAA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47040 bayes= 11.4336 E= 4.8e-300 -94 -1275 185 -226 -146 -23 139 -109 38 59 -393 6 -56 -193 165 -226 -1275 213 -393 -426 -1275 -1275 -1275 184 -426 -48 190 -1275 -268 -1275 -1275 178 -1275 217 -1275 -1275 -1275 215 -1275 -426 91 -135 15 -94 -46 -93 -135 109 -268 -1275 209 -426 -1275 -393 215 -1275 -1275 -1275 -1275 184 -194 -35 159 -168 -1275 217 -1275 -1275 -1275 -1275 -1275 184 -426 -1275 215 -1275 169 -235 -193 -1275 132 -48 -235 -146 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGHGCTGTCCATGGTGCTGAA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 69 E= 4.8e-300 0.144928 0.000000 0.797101 0.057971 0.101449 0.188406 0.579710 0.130435 0.362319 0.333333 0.014493 0.289855 0.188406 0.057971 0.695652 0.057971 0.000000 0.971014 0.014493 0.014493 0.000000 0.000000 0.000000 1.000000 0.014493 0.159420 0.826087 0.000000 0.043478 0.000000 0.000000 0.956522 0.000000 1.000000 0.000000 0.000000 0.000000 0.985507 0.000000 0.014493 0.521739 0.086957 0.246377 0.144928 0.202899 0.115942 0.086957 0.594203 0.043478 0.000000 0.942029 0.014493 0.000000 0.014493 0.985507 0.000000 0.000000 0.000000 0.000000 1.000000 0.072464 0.173913 0.666667 0.086957 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.014493 0.000000 0.985507 0.000000 0.898551 0.043478 0.057971 0.000000 0.695652 0.159420 0.043478 0.101449 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGHGCTGTCCATGGTGCTGAA MEME-1 regular expression -------------------------------------------------------------------------------- GG[ACT]GCTGTCC[AG][TA]GGTGCTGAA -------------------------------------------------------------------------------- Time 311.23 secs. ******************************************************************************** ******************************************************************************** MOTIF WTWNWTATGYWAATK MEME-2 width = 15 sites = 152 llr = 1394 E-value = 1.4e-074 ******************************************************************************** -------------------------------------------------------------------------------- Motif WTWNWTATGYWAATK MEME-2 Description -------------------------------------------------------------------------------- Simplified A 323232a:::67911 pos.-specific C 1::211:::6::::1 probability G 11231:::a::2::4 matrix T 475356:a:441:94 bits 2.2 2.0 * 1.7 *** 1.5 *** * Relative 1.3 *** ** Entropy 1.1 **** ** (13.2 bits) 0.9 ******** 0.7 * ******** 0.4 * ********* 0.2 *** *********** 0.0 --------------- Multilevel TTTTTTATGCAAATT consensus A AGAA TTG G sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWNWTATGYWAATK MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr17:35088151-35088251 - 63 4.19e-09 CCGAGCCAAT TTTGTTATGCAAATG AATTCAGCCC chr15:90942424-90942524 + 65 2.31e-08 tcagtattat tttcttatgcaaatt ttctgttttt chr10:13442564-13442664 + 61 4.09e-08 accctaatct tttattatgcaaatg ggttttctcc chr13:93878062-93878162 - 66 4.09e-08 CCTAATTGAC TTTGTTATGCTAATG GACGCACTAA chr4:81417065-81417165 + 62 5.87e-08 ttgccttttt ttagttatgcaaatt tctccagcaa chr21:19590754-19590854 + 75 1.48e-07 gggctcctca ttacttatgcaaatt tctgcagtca chr1:247987384-247987484 + 84 1.48e-07 tcaccttaat cttgttatgcaaatg ga chr4:90428501-90428601 - 68 3.18e-07 CTCCTCTGAA TTATTTATGCTAATT ATGGGGAAAG chr3:152811453-152811553 + 29 3.18e-07 acttctgaca tttcatatgctaatt agtcaagtct chr18:59283426-59283526 - 18 5.40e-07 TAAAGCTTCT GTTGTTATGCTAATG TGCCCTGAGC chr21:34734586-34734686 + 39 5.40e-07 accctcatct gttattatgcaaatg gcacctctac chr13:23454697-23454797 - 1 1.24e-06 ATTTTCTCCT TTAGAAATGCAAATT chr2:39999230-39999330 + 50 1.24e-06 CAACATTTGC TTTATTATGCTGATT GATAGTGTCA chr10:72385829-72385929 - 26 1.24e-06 AGCCAAGGTT CTTGTTATGCAGATG AAGCCTCCAG chr1:210580786-210580886 - 74 1.24e-06 CTGTTCGTGA CTAATTATGCAAATT TCACATGCTT chr3:61833572-61833672 + 44 1.47e-06 TGAGCTGTAA ATACTTATGCAGATG AAGGGTTTGT chr6:52054749-52054849 + 37 1.47e-06 CCTATTGGGA AGAGTTATGCAAATT CTCCTATAAG chr7:66644081-66644181 + 77 1.75e-06 ctggtgggag tgtcttatgctaatg aataagaag chr11:23980985-23981085 - 68 1.75e-06 GGGATTTTGT ATTTAAATGCTAATT TTCCACAGAA chr1:160641832-160641932 + 63 2.11e-06 TTCTCATCTT TTACAAATGCAAATG CCTCATCTTT chr3:10202561-10202661 + 41 2.11e-06 acacactttt aattatatgcaaatt aaggggcagt chr3:85675946-85676046 - 71 2.11e-06 TTGGAGCCTC TTACTAATGCTAATG AAAGCAATTT chr17:25672483-25672583 + 86 2.11e-06 accctgatct tttattatgtagatg chr2:170408393-170408493 - 38 2.94e-06 ATTTACATAA ATTCTTATGTAAATA GGTCCTAGGT chr2:194714056-194714156 + 22 3.42e-06 ccaggaagac attgttatgcatatt ttagagcaaa chr2:192844050-192844150 + 74 3.42e-06 AGAGCAGCTT ATTTATATGTAGATG TAGCTATATG chr9:36560739-36560839 - 49 4.03e-06 CCTAACTGCT TATCATATGCTAATT ATAATACATT chr7:70322682-70322782 + 57 4.03e-06 caaaggtggc cttgttatgtagatg aagtctccct chr11:134860520-13486062 - 55 4.03e-06 AGCCAAGGTT CTTGTTATGTAGATG AAGCCTCTAG chr1:80623611-80623711 - 75 4.03e-06 CAAAGGTGGC CTTGTTATGTAGATG AAGCCTTTTT chr8:51364746-51364846 + 20 4.70e-06 TATCTTGCAG ATTCCTATGTAAATT TTAAATATAG chrX:40704547-40704647 - 14 4.70e-06 GACTTCACTT TTTTAAATGCAAATA ATGTCAGAGT chr3:192162567-192162667 + 80 5.41e-06 AAAAAGAGCA CTAATTATGCAGATT GCATTC chr11:120107016-12010711 - 42 5.41e-06 ACTATATGTA AATGAAATGCAAATT AAATGCAAAT chr12:18473259-18473359 - 60 5.41e-06 CCATGAGCAC TAAATTATGCTAATT AATGACAATT chr2:238239272-238239372 - 65 6.19e-06 TGGTTTTCGT TTGCATATGTTAATG TTTGCCCATT chr4:58085666-58085766 - 6 7.12e-06 TGGGCCCTGA AGGTTTATGCTAATG AGGTG chr11:41519174-41519274 - 81 8.13e-06 TAGAT TGTGTAATGCAGATG TCTTCAGTGT chr4:44542737-44542837 - 84 8.13e-06 CA ATTCTTATGCAAAAT TTGAGCAAGG chr8:132999331-132999431 - 20 8.13e-06 TGTAGCTTTT ATTGTCATGTTAATT AAAAAGTGTA chr15:80681679-80681779 + 3 9.23e-06 CT CTGTATATGTAAATT ATTGAATAAT chr3:184617999-184618099 + 62 9.23e-06 TCTTTTGGGC TTTTTGATGCTAATG GCAGCTGAAT chr1:209304394-209304494 - 11 9.23e-06 TAAGATCTCT GTTTTAATGTTAATG CTGCTCAGTT chr5:51627620-51627720 + 51 9.23e-06 AGTTTCTGAG CTATGTATGCAAATG AAGCTATGCC chr6:113064000-113064100 - 77 9.23e-06 TGGAGATGA AGTTATATGTTAATT TGCTCCCTGA chrX:51471365-51471465 + 31 9.23e-06 TTGCATAATC TTACttatgttaata tggttaggag chr4:185114558-185114658 - 79 9.23e-06 ACCTAAT TTCCATATGCTAATT AGATCCCATA chrX:50357311-50357411 - 28 9.23e-06 GCCCTCCCTA GGAGTTATGCTAATT TCAACTCCCA chr7:26775613-26775713 + 84 1.04e-05 cctcactgct cattatatgctaatt at chr16:25865554-25865654 - 55 1.04e-05 CCTCACTGCT CATTATATGCTAATT ACAATTCATT chr5:95638032-95638132 + 56 1.04e-05 ggtcatttct ttgtttatgcagata agcataggct chr4:14446613-14446713 - 72 1.04e-05 TCCTTGCTTT GTTTTTATGTTGATT CTAAAGGTTA chr5:113695980-113696080 + 77 1.04e-05 TTGAATTCAC AAAGAAATGCAAATG TAAAGACTT chrX:106804791-106804891 + 81 1.18e-05 TAGCTTCTCT TTTAAGATGCAAATT TCCCC chr4:165874588-165874688 - 50 1.18e-05 TGGATCAACT GGATTTATGCTAATG AGGTGGGTTG chr8:135533466-135533566 - 86 1.33e-05 . GAATTTATGCTAATG ACTTAGCTTC chr11:104493923-10449402 - 56 1.33e-05 ATTTTTCCTA AGGGATATGTAAATT ATATTTATCA chr11:38347995-38348095 - 71 1.33e-05 ATTTGATGTA ATTGTCATGCTAATA TGCTATCCCC chrX:123364566-123364666 - 37 1.49e-05 CCTAATCCAA TTTGTTATGCAGAAT ACAATCAATG chr13:89416391-89416491 + 48 1.49e-05 tttacagctc tttagaatgtaaatg aattactttg chr15:39000478-39000578 - 77 1.49e-05 TCAGATATT CTCCTTATGCTAATT TTGTAGATAG chr3:149461828-149461928 + 51 1.49e-05 AAAATGTCTT ATGTCAATGCAAATT AGAAAAAAGA chr11:85237594-85237694 - 83 1.49e-05 CTG ATTCAAATGCTAATC TCTTCCAGAA chr13:96652439-96652539 + 39 1.49e-05 ACCAAGCCTT ATTGATATGTATATG GCCAGAGTGA chr8:104608012-104608112 - 41 1.49e-05 AAAGTAACTT CTTGGTATGTTAATT AGTTACCAAA chr10:73104320-73104420 - 63 1.67e-05 ACGGGGGTCT ATGGACATGCTAATT TGCCCAGCTA chr4:135066558-135066658 + 44 1.67e-05 TGAGTGAGTA AGTCAAATGTAAATG AGGCTGTTGA chr20:1986514-1986614 - 70 1.86e-05 GAGTATTAGA TAACATATGCAAATA CACAGCATAA chr1:154159803-154159903 + 79 1.86e-05 GTTTTGGTGG ATTCCTATGTAAATA TGAAGAA chr9:37226295-37226395 + 39 1.86e-05 tattgtgaag attagtatgtagatg tatgggacag chr18:47088177-47088277 + 46 1.86e-05 GAGACGGGAA TAAATTATGCAAATC ACCATCTGGC chr4:65460537-65460637 - 53 2.08e-05 GAGTATCTTT TTTATCATGTAGATG CCTGTAAATA chrX:133103303-133103403 + 75 2.08e-05 ACAACAATGC CTGTTTATGTAAATA GGATTTTCAA chr13:28380877-28380977 + 45 2.08e-05 CATTCTGGGT ATTAGCATGCAAATG AGCGTGTCAA chr3:77328049-77328149 + 70 2.08e-05 TTATACGGGA AACATTATGCAAATG ACTCACAATG chr4:116517530-116517630 - 2 2.08e-05 CATCATTTCC ATACTCATGCAAATA A chr1:73642645-73642745 - 18 2.08e-05 GATCATACCT GAGTTTATGCTAATG ATATGACTCA chr1:223834942-223835042 + 41 2.08e-05 ctttatccta tgtaaaatgcagatt tactaagcac chr3:124091668-124091768 - 80 2.08e-05 CTGCTC CAGGTTATGTAAATT AGGATGGGCT chr14:57692733-57692833 - 19 2.31e-05 GAATTTCACC TTGGCAATGTAAATT GATAACTTAT chr5:95418906-95419006 - 82 2.31e-05 TAAA ATAGACATGTTAATT TTCTAGAAAG chr5:151625992-151626092 + 35 2.31e-05 AAGTTGGAAG TTAGTTATGTTTATT CTTTATGTGA chr13:36872816-36872916 - 39 2.31e-05 CAGTCTACCA ATTGAAATGTTAATC TCATCCAGAA chr11:27494222-27494322 + 21 2.31e-05 CCCCGGCCGC TGGCTTATGCAAATC ACTTAGGTAC chr4:34187806-34187906 + 48 2.31e-05 gatgtgcata ggttatatgcaaata atattacatt chr16:66087943-66088043 + 62 2.56e-05 tattgtttat gtaaaaatgcagatt cacggagcca chr13:58246333-58246433 + 80 2.56e-05 GAGGGCAGTA TTTGTTATGTAATTT CGCAGT chr4:140381694-140381794 - 11 2.56e-05 CATTCACTGA ATTTCAATGCAAATC AAATCAAATC chr18:35070145-35070245 - 62 2.56e-05 TCCTTTCAAG TTAATTATGCAAGTG ATACATGAAT chr7:50881995-50882095 + 73 2.56e-05 attatcttat gtaaaaatgcagatt cactgagcca chr4:157935976-157936076 + 77 2.83e-05 ggatgcaaag taggctatgctaatt agatgcatt chr11:94390103-94390203 - 61 2.83e-05 ACTTGGTGTG TGATCTATGTAAATG GAGAGGATGA chr5:9833079-9833179 - 14 2.83e-05 GCTGTTTATG TGATAAATGCAGATT CACTGAGCCA chr6:21399239-21399339 - 16 2.83e-05 GGGAGTGTCT TTTAGCATGCTAATG TATTGTAATT chr2:75076729-75076829 + 48 2.83e-05 TTTTGTCCCC ACAGTTATGCTAATG ACTCTGTCAT chr1:109827656-109827756 - 16 2.83e-05 AGGAGTGTCT TTTAGCATGCTAATG AATTACAACT chr2:114646841-114646941 + 9 2.83e-05 CTATTTGT ATAGTTATGCAGAAT ATATTCCTGG chr5:106361914-106362014 - 46 2.83e-05 TCTTTGAATC ATGAGTATGTTAATG TGTGTATCAT chrX:91365466-91365566 - 80 3.12e-05 TTCTCC ATGGCCATGCAAATT GATAGCTTAT chr4:92499055-92499155 + 46 3.12e-05 aggctcccca attttgatgcaaatc taatgtgtgt chr12:81176649-81176749 - 22 3.44e-05 GAGATTTCCT TTATAGATGTAAATT GCTTTTACAA chr3:181840585-181840685 + 48 3.44e-05 TTGTAACCAT AAATAAATGCAGATG CTGGGTACAT chr2:204598883-204598983 + 30 3.44e-05 acagcttgtt aagcaaatgctaatg taagaagatc chr15:69087699-69087799 - 56 3.79e-05 GCAAGTCACA GGGTTTATGTTAATG CGGGCCCTCC chr12:126718140-12671824 - 27 3.79e-05 CTGACTCTTT CTTATTATTCAAATT TCTGCTAATA chr6:65900741-65900841 - 17 3.79e-05 CAGGCCATTC TTCTCAATGCAAATG TTTCAGAATT chr5:54920928-54921028 - 35 3.79e-05 GTTATTTCTT GGTGATATGCTAATC AAGGGGTGGA chr9:109697230-109697330 + 38 4.16e-05 AGTCAGCTCT TTTCAAATGCTAAAT TTCTCTAATT chr2:84532074-84532174 + 59 4.16e-05 aatcacacct gagtttatgttaatg gagtgatctc chr9:108059249-108059349 + 5 4.16e-05 TTGG TTTTTAATGCTAGTT AGAGTCTTAG chr6:62737195-62737295 + 65 4.16e-05 cttcacacct gagtttatgttaatg aggtgacttt chr2:205466330-205466430 - 85 4.56e-05 T TGAATAATGTAGATG AAATCTTGCC chr18:70111918-70112018 + 25 4.56e-05 tctctgctct tttgaaatgcatata tatcttctta chr11:105543661-10554376 + 40 4.56e-05 ATGTTCTCAT ATCTGAATGCAAATT ATCATCTTAC chr4:110107643-110107743 + 63 5.00e-05 AAAAAGAGAC AATAAAATGTAGATT TCCCCACCTG chr11:92850339-92850439 + 40 5.00e-05 tttattttac gtaaaaatgtagatt aaccacacac chr7:130775647-130775747 + 63 5.00e-05 cttttcacat gtaaaaatgtagatt cactgagcag chr7:76302666-76302766 + 69 5.00e-05 accctgatct tttattatgcagacg gattttctac chr5:95806980-95807080 + 75 5.00e-05 GATGCCTCGC ATTTTTATGTAAAAA CGACTGCTAC chr6:158129461-158129561 - 44 5.47e-05 TTGAACCTCC TTTGTAAAGCTAATG AGAGACCACC chr3:21641525-21641625 - 42 5.47e-05 TGGTTATTTC TTTATTATGCTAAAC AGGGGCTGGA chr3:85939324-85939424 - 32 5.97e-05 TTCACACGGT TATCTTATGTAAAAT GTAGATTGAC chr9:3362076-3362176 + 42 5.97e-05 CTTCCTTGCA TATTCAATGTTAATT ACAAAGTTGC chr4:92544536-92544636 + 77 6.51e-05 agcaaaatta tttatgatgtaaatc agaaattca chr11:84425176-84425276 - 54 6.51e-05 GTTTGCCCAT TTGTTTATTTAAATG TGGCCAACTT chr12:131432640-13143274 + 22 7.09e-05 cagcctcttc cgggctatgtaaatg gcatatctgg chr6:160661234-160661334 - 72 7.09e-05 CCTGCAGGTC ATTCATAAGTAAATT CTTTGCTGGC chr7:131055414-131055514 + 1 7.09e-05 . ATACTTATGCAGTTG ATGCCTGACT chr12:64793970-64794070 - 28 7.09e-05 ACTGAGTTTT ATTATTATTCAAATC AGTCTCCCTG chr2:181922957-181923057 + 23 7.09e-05 AAGCATGAGC ATTATTATGCTGTTG TTACAGAGAT chr6:121940228-121940328 + 46 7.09e-05 gagtccaccg actcaaatgctaatt tcattcagaa chr14:71271389-71271489 + 62 7.72e-05 TTCTTGCTAT TTAGTTAAGCAAATA TTATGACCTG chr2:148795290-148795390 - 77 7.72e-05 GTTTGTTCT TTTGTAATGTATATC ACTCATAAAT chrX:22061370-22061470 + 39 8.38e-05 ggcatcatgc atttatatGGTAatg tgcccaacac chr19:38993736-38993836 - 53 9.86e-05 AGCTGTGATA ATGTTTATTCAAATA AATGCACTCA chr2:8820859-8820959 + 69 9.86e-05 CTTTCAAGGG CAGTGTATGTAAATG TAGTTTCAAT chr2:176717912-176718012 - 35 1.07e-04 ATCTGTTATG TTAGTAATTCAAATA GAATTCCTGC chr6:8552346-8552446 + 31 1.16e-04 TCTTTCTCTT ATAATTATGCTGACT TGTGTGCTGC chr1:6112407-6112507 - 58 1.16e-04 TGCATGGAAC GTATTTATGCTAAAA AGTTACGCGT chr8:94892424-94892524 + 66 1.16e-04 AAAGGTTGGT TTAATTATGTTAAAA GCAACCCTAA chr4:5877086-5877186 - 75 1.25e-04 CGTGTCTCTG TATCTAATGTTTATT TGGCTGGAAT chr6:157112487-157112587 + 42 1.35e-04 GCCGTGACCT TCACATATGTAGATT AGCCATGTGC chr2:180357736-180357836 + 23 1.35e-04 tggcatgtat atatatatgtaggtt tgtgtgcgcg chr9:30630385-30630485 + 24 1.45e-04 GTTTCAGGTA CACAATATGCAAATA CCTTTCTATT chr2:178044079-178044179 - 79 1.45e-04 GGTCATC TGTAACATGCATATT TGTTCAGTAG chr13:84300057-84300157 + 3 1.45e-04 TT ATTTATATGCAGTTA TTTTGTGTTT chr8:71291932-71292032 - 46 1.57e-04 AGAAGGCTTA AGCTGTATGTTAATT ACTCATGTTT chr6:158889185-158889285 + 48 1.69e-04 gcctttcttt attactattttaatt tgtttaacta chr8:20363883-20363983 - 61 1.81e-04 GTTTAAAGAG TAACATATGTAAGTT AGTACCAGTC chr12:66155132-66155232 - 74 2.40e-04 GATTCCAGAA TGTTGTATGCTAACG AGGTCTTCAA chr8:106664092-106664192 - 30 2.57e-04 CAGCATAATA TATGCTATGTATATA TGCAACATTT chr21:27683305-27683405 + 56 2.93e-04 AACCatatat atatacatgtatata tatatatatg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWNWTATGYWAATK MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:35088151-35088251 4.2e-09 62_[-2]_23 chr15:90942424-90942524 2.3e-08 64_[+2]_21 chr10:13442564-13442664 4.1e-08 60_[+2]_25 chr13:93878062-93878162 4.1e-08 65_[-2]_20 chr4:81417065-81417165 5.9e-08 61_[+2]_24 chr21:19590754-19590854 1.5e-07 74_[+2]_11 chr1:247987384-247987484 1.5e-07 83_[+2]_2 chr4:90428501-90428601 3.2e-07 67_[-2]_18 chr3:152811453-152811553 3.2e-07 28_[+2]_57 chr18:59283426-59283526 5.4e-07 17_[-2]_68 chr21:34734586-34734686 5.4e-07 38_[+2]_47 chr13:23454697-23454797 1.2e-06 [-2]_85 chr2:39999230-39999330 1.2e-06 49_[+2]_36 chr10:72385829-72385929 1.2e-06 25_[-2]_60 chr1:210580786-210580886 1.2e-06 73_[-2]_12 chr3:61833572-61833672 1.5e-06 43_[+2]_42 chr6:52054749-52054849 1.5e-06 36_[+2]_49 chr7:66644081-66644181 1.7e-06 76_[+2]_9 chr11:23980985-23981085 1.7e-06 67_[-2]_18 chr1:160641832-160641932 2.1e-06 62_[+2]_23 chr3:10202561-10202661 2.1e-06 40_[+2]_45 chr3:85675946-85676046 2.1e-06 70_[-2]_15 chr17:25672483-25672583 2.1e-06 85_[+2] chr2:170408393-170408493 2.9e-06 37_[-2]_48 chr2:194714056-194714156 3.4e-06 21_[+2]_64 chr2:192844050-192844150 3.4e-06 73_[+2]_12 chr9:36560739-36560839 4e-06 48_[-2]_37 chr7:70322682-70322782 4e-06 56_[+2]_29 chr11:134860520-13486062 4e-06 54_[-2]_31 chr1:80623611-80623711 4e-06 74_[-2]_11 chr8:51364746-51364846 4.7e-06 19_[+2]_66 chrX:40704547-40704647 4.7e-06 13_[-2]_72 chr3:192162567-192162667 5.4e-06 79_[+2]_6 chr11:120107016-12010711 5.4e-06 41_[-2]_44 chr12:18473259-18473359 5.4e-06 59_[-2]_26 chr2:238239272-238239372 6.2e-06 64_[-2]_21 chr4:58085666-58085766 7.1e-06 5_[-2]_80 chr11:41519174-41519274 8.1e-06 80_[-2]_5 chr4:44542737-44542837 8.1e-06 83_[-2]_2 chr8:132999331-132999431 8.1e-06 19_[-2]_66 chr15:80681679-80681779 9.2e-06 2_[+2]_83 chr3:184617999-184618099 9.2e-06 61_[+2]_24 chr1:209304394-209304494 9.2e-06 10_[-2]_75 chr5:51627620-51627720 9.2e-06 50_[+2]_35 chr6:113064000-113064100 9.2e-06 76_[-2]_9 chrX:51471365-51471465 9.2e-06 30_[+2]_55 chr4:185114558-185114658 9.2e-06 78_[-2]_7 chrX:50357311-50357411 9.2e-06 27_[-2]_58 chr7:26775613-26775713 1e-05 83_[+2]_2 chr16:25865554-25865654 1e-05 54_[-2]_31 chr5:95638032-95638132 1e-05 55_[+2]_30 chr4:14446613-14446713 1e-05 71_[-2]_14 chr5:113695980-113696080 1e-05 76_[+2]_9 chrX:106804791-106804891 1.2e-05 80_[+2]_5 chr4:165874588-165874688 1.2e-05 49_[-2]_36 chr8:135533466-135533566 1.3e-05 85_[-2] chr11:104493923-10449402 1.3e-05 55_[-2]_30 chr11:38347995-38348095 1.3e-05 70_[-2]_15 chrX:123364566-123364666 1.5e-05 36_[-2]_49 chr13:89416391-89416491 1.5e-05 47_[+2]_38 chr15:39000478-39000578 1.5e-05 76_[-2]_9 chr3:149461828-149461928 1.5e-05 50_[+2]_35 chr11:85237594-85237694 1.5e-05 82_[-2]_3 chr13:96652439-96652539 1.5e-05 38_[+2]_47 chr8:104608012-104608112 1.5e-05 40_[-2]_45 chr10:73104320-73104420 1.7e-05 62_[-2]_23 chr4:135066558-135066658 1.7e-05 43_[+2]_42 chr20:1986514-1986614 1.9e-05 69_[-2]_16 chr1:154159803-154159903 1.9e-05 78_[+2]_7 chr9:37226295-37226395 1.9e-05 38_[+2]_47 chr18:47088177-47088277 1.9e-05 45_[+2]_40 chr4:65460537-65460637 2.1e-05 52_[-2]_33 chrX:133103303-133103403 2.1e-05 74_[+2]_11 chr13:28380877-28380977 2.1e-05 44_[+2]_41 chr3:77328049-77328149 2.1e-05 69_[+2]_16 chr4:116517530-116517630 2.1e-05 1_[-2]_84 chr1:73642645-73642745 2.1e-05 17_[-2]_68 chr1:223834942-223835042 2.1e-05 40_[+2]_45 chr3:124091668-124091768 2.1e-05 79_[-2]_6 chr14:57692733-57692833 2.3e-05 18_[-2]_67 chr5:95418906-95419006 2.3e-05 81_[-2]_4 chr5:151625992-151626092 2.3e-05 34_[+2]_51 chr13:36872816-36872916 2.3e-05 38_[-2]_47 chr11:27494222-27494322 2.3e-05 20_[+2]_65 chr4:34187806-34187906 2.3e-05 47_[+2]_38 chr16:66087943-66088043 2.6e-05 61_[+2]_24 chr13:58246333-58246433 2.6e-05 79_[+2]_6 chr4:140381694-140381794 2.6e-05 10_[-2]_75 chr18:35070145-35070245 2.6e-05 61_[-2]_24 chr7:50881995-50882095 2.6e-05 72_[+2]_13 chr4:157935976-157936076 2.8e-05 76_[+2]_9 chr11:94390103-94390203 2.8e-05 60_[-2]_25 chr5:9833079-9833179 2.8e-05 13_[-2]_72 chr6:21399239-21399339 2.8e-05 15_[-2]_70 chr2:75076729-75076829 2.8e-05 47_[+2]_38 chr1:109827656-109827756 2.8e-05 15_[-2]_70 chr2:114646841-114646941 2.8e-05 8_[+2]_77 chr5:106361914-106362014 2.8e-05 45_[-2]_40 chrX:91365466-91365566 3.1e-05 79_[-2]_6 chr4:92499055-92499155 3.1e-05 45_[+2]_40 chr12:81176649-81176749 3.4e-05 21_[-2]_64 chr3:181840585-181840685 3.4e-05 47_[+2]_38 chr2:204598883-204598983 3.4e-05 29_[+2]_56 chr15:69087699-69087799 3.8e-05 55_[-2]_30 chr12:126718140-12671824 3.8e-05 26_[-2]_59 chr6:65900741-65900841 3.8e-05 16_[-2]_69 chr5:54920928-54921028 3.8e-05 34_[-2]_51 chr9:109697230-109697330 4.2e-05 37_[+2]_48 chr2:84532074-84532174 4.2e-05 58_[+2]_27 chr9:108059249-108059349 4.2e-05 4_[+2]_81 chr6:62737195-62737295 4.2e-05 64_[+2]_21 chr2:205466330-205466430 4.6e-05 84_[-2]_1 chr18:70111918-70112018 4.6e-05 24_[+2]_61 chr11:105543661-10554376 4.6e-05 39_[+2]_46 chr4:110107643-110107743 5e-05 62_[+2]_23 chr11:92850339-92850439 5e-05 39_[+2]_46 chr7:130775647-130775747 5e-05 62_[+2]_23 chr7:76302666-76302766 5e-05 68_[+2]_17 chr5:95806980-95807080 5e-05 74_[+2]_11 chr6:158129461-158129561 5.5e-05 43_[-2]_42 chr3:21641525-21641625 5.5e-05 41_[-2]_44 chr3:85939324-85939424 6e-05 31_[-2]_54 chr9:3362076-3362176 6e-05 41_[+2]_44 chr4:92544536-92544636 6.5e-05 76_[+2]_9 chr11:84425176-84425276 6.5e-05 53_[-2]_32 chr12:131432640-13143274 7.1e-05 21_[+2]_64 chr6:160661234-160661334 7.1e-05 71_[-2]_14 chr7:131055414-131055514 7.1e-05 [+2]_85 chr12:64793970-64794070 7.1e-05 27_[-2]_58 chr2:181922957-181923057 7.1e-05 22_[+2]_63 chr6:121940228-121940328 7.1e-05 45_[+2]_40 chr14:71271389-71271489 7.7e-05 61_[+2]_24 chr2:148795290-148795390 7.7e-05 76_[-2]_9 chrX:22061370-22061470 8.4e-05 38_[+2]_47 chr19:38993736-38993836 9.9e-05 52_[-2]_33 chr2:8820859-8820959 9.9e-05 68_[+2]_17 chr2:176717912-176718012 0.00011 34_[-2]_51 chr6:8552346-8552446 0.00012 30_[+2]_55 chr1:6112407-6112507 0.00012 57_[-2]_28 chr8:94892424-94892524 0.00012 65_[+2]_20 chr4:5877086-5877186 0.00012 74_[-2]_11 chr6:157112487-157112587 0.00013 41_[+2]_44 chr2:180357736-180357836 0.00013 22_[+2]_63 chr9:30630385-30630485 0.00015 23_[+2]_62 chr2:178044079-178044179 0.00015 78_[-2]_7 chr13:84300057-84300157 0.00015 2_[+2]_83 chr8:71291932-71292032 0.00016 45_[-2]_40 chr6:158889185-158889285 0.00017 47_[+2]_38 chr8:20363883-20363983 0.00018 60_[-2]_25 chr12:66155132-66155232 0.00024 73_[-2]_12 chr8:106664092-106664192 0.00026 29_[-2]_56 chr21:27683305-27683405 0.00029 55_[+2]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWNWTATGYWAATK MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WTWNWTATGYWAATK width=15 seqs=152 chr17:35088151-35088251 ( 63) TTTGTTATGCAAATG 1 chr15:90942424-90942524 ( 65) TTTCTTATGCAAATT 1 chr10:13442564-13442664 ( 61) TTTATTATGCAAATG 1 chr13:93878062-93878162 ( 66) TTTGTTATGCTAATG 1 chr4:81417065-81417165 ( 62) TTAGTTATGCAAATT 1 chr21:19590754-19590854 ( 75) TTACTTATGCAAATT 1 chr1:247987384-247987484 ( 84) CTTGTTATGCAAATG 1 chr4:90428501-90428601 ( 68) TTATTTATGCTAATT 1 chr3:152811453-152811553 ( 29) TTTCATATGCTAATT 1 chr18:59283426-59283526 ( 18) GTTGTTATGCTAATG 1 chr21:34734586-34734686 ( 39) GTTATTATGCAAATG 1 chr13:23454697-23454797 ( 1) TTAGAAATGCAAATT 1 chr2:39999230-39999330 ( 50) TTTATTATGCTGATT 1 chr10:72385829-72385929 ( 26) CTTGTTATGCAGATG 1 chr1:210580786-210580886 ( 74) CTAATTATGCAAATT 1 chr3:61833572-61833672 ( 44) ATACTTATGCAGATG 1 chr6:52054749-52054849 ( 37) AGAGTTATGCAAATT 1 chr7:66644081-66644181 ( 77) TGTCTTATGCTAATG 1 chr11:23980985-23981085 ( 68) ATTTAAATGCTAATT 1 chr1:160641832-160641932 ( 63) TTACAAATGCAAATG 1 chr3:10202561-10202661 ( 41) AATTATATGCAAATT 1 chr3:85675946-85676046 ( 71) TTACTAATGCTAATG 1 chr17:25672483-25672583 ( 86) TTTATTATGTAGATG 1 chr2:170408393-170408493 ( 38) ATTCTTATGTAAATA 1 chr2:194714056-194714156 ( 22) ATTGTTATGCATATT 1 chr2:192844050-192844150 ( 74) ATTTATATGTAGATG 1 chr9:36560739-36560839 ( 49) TATCATATGCTAATT 1 chr7:70322682-70322782 ( 57) CTTGTTATGTAGATG 1 chr11:134860520-13486062 ( 55) CTTGTTATGTAGATG 1 chr1:80623611-80623711 ( 75) CTTGTTATGTAGATG 1 chr8:51364746-51364846 ( 20) ATTCCTATGTAAATT 1 chrX:40704547-40704647 ( 14) TTTTAAATGCAAATA 1 chr3:192162567-192162667 ( 80) CTAATTATGCAGATT 1 chr11:120107016-12010711 ( 42) AATGAAATGCAAATT 1 chr12:18473259-18473359 ( 60) TAAATTATGCTAATT 1 chr2:238239272-238239372 ( 65) TTGCATATGTTAATG 1 chr4:58085666-58085766 ( 6) AGGTTTATGCTAATG 1 chr11:41519174-41519274 ( 81) TGTGTAATGCAGATG 1 chr4:44542737-44542837 ( 84) ATTCTTATGCAAAAT 1 chr8:132999331-132999431 ( 20) ATTGTCATGTTAATT 1 chr15:80681679-80681779 ( 3) CTGTATATGTAAATT 1 chr3:184617999-184618099 ( 62) TTTTTGATGCTAATG 1 chr1:209304394-209304494 ( 11) GTTTTAATGTTAATG 1 chr5:51627620-51627720 ( 51) CTATGTATGCAAATG 1 chr6:113064000-113064100 ( 77) AGTTATATGTTAATT 1 chrX:51471365-51471465 ( 31) TTACTTATGTTAATA 1 chr4:185114558-185114658 ( 79) TTCCATATGCTAATT 1 chrX:50357311-50357411 ( 28) GGAGTTATGCTAATT 1 chr7:26775613-26775713 ( 84) CATTATATGCTAATT 1 chr16:25865554-25865654 ( 55) CATTATATGCTAATT 1 chr5:95638032-95638132 ( 56) TTGTTTATGCAGATA 1 chr4:14446613-14446713 ( 72) GTTTTTATGTTGATT 1 chr5:113695980-113696080 ( 77) AAAGAAATGCAAATG 1 chrX:106804791-106804891 ( 81) TTTAAGATGCAAATT 1 chr4:165874588-165874688 ( 50) GGATTTATGCTAATG 1 chr8:135533466-135533566 ( 86) GAATTTATGCTAATG 1 chr11:104493923-10449402 ( 56) AGGGATATGTAAATT 1 chr11:38347995-38348095 ( 71) ATTGTCATGCTAATA 1 chrX:123364566-123364666 ( 37) TTTGTTATGCAGAAT 1 chr13:89416391-89416491 ( 48) TTTAGAATGTAAATG 1 chr15:39000478-39000578 ( 77) CTCCTTATGCTAATT 1 chr3:149461828-149461928 ( 51) ATGTCAATGCAAATT 1 chr11:85237594-85237694 ( 83) ATTCAAATGCTAATC 1 chr13:96652439-96652539 ( 39) ATTGATATGTATATG 1 chr8:104608012-104608112 ( 41) CTTGGTATGTTAATT 1 chr10:73104320-73104420 ( 63) ATGGACATGCTAATT 1 chr4:135066558-135066658 ( 44) AGTCAAATGTAAATG 1 chr20:1986514-1986614 ( 70) TAACATATGCAAATA 1 chr1:154159803-154159903 ( 79) ATTCCTATGTAAATA 1 chr9:37226295-37226395 ( 39) ATTAGTATGTAGATG 1 chr18:47088177-47088277 ( 46) TAAATTATGCAAATC 1 chr4:65460537-65460637 ( 53) TTTATCATGTAGATG 1 chrX:133103303-133103403 ( 75) CTGTTTATGTAAATA 1 chr13:28380877-28380977 ( 45) ATTAGCATGCAAATG 1 chr3:77328049-77328149 ( 70) AACATTATGCAAATG 1 chr4:116517530-116517630 ( 2) ATACTCATGCAAATA 1 chr1:73642645-73642745 ( 18) GAGTTTATGCTAATG 1 chr1:223834942-223835042 ( 41) TGTAAAATGCAGATT 1 chr3:124091668-124091768 ( 80) CAGGTTATGTAAATT 1 chr14:57692733-57692833 ( 19) TTGGCAATGTAAATT 1 chr5:95418906-95419006 ( 82) ATAGACATGTTAATT 1 chr5:151625992-151626092 ( 35) TTAGTTATGTTTATT 1 chr13:36872816-36872916 ( 39) ATTGAAATGTTAATC 1 chr11:27494222-27494322 ( 21) TGGCTTATGCAAATC 1 chr4:34187806-34187906 ( 48) GGTTATATGCAAATA 1 chr16:66087943-66088043 ( 62) GTAAAAATGCAGATT 1 chr13:58246333-58246433 ( 80) TTTGTTATGTAATTT 1 chr4:140381694-140381794 ( 11) ATTTCAATGCAAATC 1 chr18:35070145-35070245 ( 62) TTAATTATGCAAGTG 1 chr7:50881995-50882095 ( 73) GTAAAAATGCAGATT 1 chr4:157935976-157936076 ( 77) TAGGCTATGCTAATT 1 chr11:94390103-94390203 ( 61) TGATCTATGTAAATG 1 chr5:9833079-9833179 ( 14) TGATAAATGCAGATT 1 chr6:21399239-21399339 ( 16) TTTAGCATGCTAATG 1 chr2:75076729-75076829 ( 48) ACAGTTATGCTAATG 1 chr1:109827656-109827756 ( 16) TTTAGCATGCTAATG 1 chr2:114646841-114646941 ( 9) ATAGTTATGCAGAAT 1 chr5:106361914-106362014 ( 46) ATGAGTATGTTAATG 1 chrX:91365466-91365566 ( 80) ATGGCCATGCAAATT 1 chr4:92499055-92499155 ( 46) ATTTTGATGCAAATC 1 chr12:81176649-81176749 ( 22) TTATAGATGTAAATT 1 chr3:181840585-181840685 ( 48) AAATAAATGCAGATG 1 chr2:204598883-204598983 ( 30) AAGCAAATGCTAATG 1 chr15:69087699-69087799 ( 56) GGGTTTATGTTAATG 1 chr12:126718140-12671824 ( 27) CTTATTATTCAAATT 1 chr6:65900741-65900841 ( 17) TTCTCAATGCAAATG 1 chr5:54920928-54921028 ( 35) GGTGATATGCTAATC 1 chr9:109697230-109697330 ( 38) TTTCAAATGCTAAAT 1 chr2:84532074-84532174 ( 59) GAGTTTATGTTAATG 1 chr9:108059249-108059349 ( 5) TTTTTAATGCTAGTT 1 chr6:62737195-62737295 ( 65) GAGTTTATGTTAATG 1 chr2:205466330-205466430 ( 85) TGAATAATGTAGATG 1 chr18:70111918-70112018 ( 25) TTTGAAATGCATATA 1 chr11:105543661-10554376 ( 40) ATCTGAATGCAAATT 1 chr4:110107643-110107743 ( 63) AATAAAATGTAGATT 1 chr11:92850339-92850439 ( 40) GTAAAAATGTAGATT 1 chr7:130775647-130775747 ( 63) GTAAAAATGTAGATT 1 chr7:76302666-76302766 ( 69) TTTATTATGCAGACG 1 chr5:95806980-95807080 ( 75) ATTTTTATGTAAAAA 1 chr6:158129461-158129561 ( 44) TTTGTAAAGCTAATG 1 chr3:21641525-21641625 ( 42) TTTATTATGCTAAAC 1 chr3:85939324-85939424 ( 32) TATCTTATGTAAAAT 1 chr9:3362076-3362176 ( 42) TATTCAATGTTAATT 1 chr4:92544536-92544636 ( 77) TTTATGATGTAAATC 1 chr11:84425176-84425276 ( 54) TTGTTTATTTAAATG 1 chr12:131432640-13143274 ( 22) CGGGCTATGTAAATG 1 chr6:160661234-160661334 ( 72) ATTCATAAGTAAATT 1 chr7:131055414-131055514 ( 1) ATACTTATGCAGTTG 1 chr12:64793970-64794070 ( 28) ATTATTATTCAAATC 1 chr2:181922957-181923057 ( 23) ATTATTATGCTGTTG 1 chr6:121940228-121940328 ( 46) ACTCAAATGCTAATT 1 chr14:71271389-71271489 ( 62) TTAGTTAAGCAAATA 1 chr2:148795290-148795390 ( 77) TTTGTAATGTATATC 1 chrX:22061370-22061470 ( 39) ATTTATATGGTAATG 1 chr19:38993736-38993836 ( 53) ATGTTTATTCAAATA 1 chr2:8820859-8820959 ( 69) CAGTGTATGTAAATG 1 chr2:176717912-176718012 ( 35) TTAGTAATTCAAATA 1 chr6:8552346-8552446 ( 31) ATAATTATGCTGACT 1 chr1:6112407-6112507 ( 58) GTATTTATGCTAAAA 1 chr8:94892424-94892524 ( 66) TTAATTATGTTAAAA 1 chr4:5877086-5877186 ( 75) TATCTAATGTTTATT 1 chr6:157112487-157112587 ( 42) TCACATATGTAGATT 1 chr2:180357736-180357836 ( 23) ATATATATGTAGGTT 1 chr9:30630385-30630485 ( 24) CACAATATGCAAATA 1 chr2:178044079-178044179 ( 79) TGTAACATGCATATT 1 chr13:84300057-84300157 ( 3) ATTTATATGCAGTTA 1 chr8:71291932-71292032 ( 46) AGCTGTATGTTAATT 1 chr6:158889185-158889285 ( 48) ATTACTATTTTAATT 1 chr8:20363883-20363983 ( 61) TAACATATGTAAGTT 1 chr12:66155132-66155232 ( 74) TGTTGTATGCTAACG 1 chr8:106664092-106664192 ( 30) TATGCTATGTATATA 1 chr21:27683305-27683405 ( 56) ATATACATGTATATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWNWTATGYWAATK MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 50568 bayes= 10.1917 E= 1.4e-074 30 -83 -90 57 -70 -349 -68 127 6 -227 -55 88 -23 -17 28 9 21 -137 -149 88 -19 -149 -275 121 184 -1389 -1389 -1389 -382 -1389 -1389 182 -1389 -1389 212 -282 -1389 148 -507 43 115 -1389 -1389 45 139 -1389 -7 -223 177 -1389 -307 -340 -223 -349 -1389 173 -101 -161 71 62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWNWTATGYWAATK MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 152 E= 1.4e-074 0.342105 0.125000 0.118421 0.414474 0.171053 0.019737 0.138158 0.671053 0.289474 0.046053 0.151316 0.513158 0.236842 0.197368 0.269737 0.296053 0.322368 0.085526 0.078947 0.513158 0.243421 0.078947 0.032895 0.644737 1.000000 0.000000 0.000000 0.000000 0.019737 0.000000 0.000000 0.980263 0.000000 0.000000 0.960526 0.039474 0.000000 0.618421 0.006579 0.375000 0.618421 0.000000 0.000000 0.381579 0.730263 0.000000 0.210526 0.059211 0.947368 0.000000 0.026316 0.026316 0.059211 0.019737 0.000000 0.921053 0.138158 0.072368 0.361842 0.427632 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWNWTATGYWAATK MEME-2 regular expression -------------------------------------------------------------------------------- [TA]T[TA][TGA][TA][TA]ATG[CT][AT][AG]AT[TG] -------------------------------------------------------------------------------- Time 600.51 secs. ******************************************************************************** ******************************************************************************** MOTIF GSGGVDRVVGVGVVGGGRGGSGSGGGGMK MEME-3 width = 29 sites = 68 llr = 861 E-value = 4.3e-059 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSGGVDRVVGVGVVGGGRGGSGSGGGGMK MEME-3 Description -------------------------------------------------------------------------------- Simplified A :2114433223:343:15112:1222:3: pos.-specific C 33122:13423:33:1212:32412125: probability G 74774353364943675478475666725 matrix T :11::31111::1:111:::1:11:11:4 bits 2.2 2.0 1.7 * 1.5 * Relative 1.3 * Entropy 1.1 * * * * * * (18.3 bits) 0.9 * * * * ** * * 0.7 * ** * * *** * ***** 0.4 * *** * *** **************** 0.2 ***************************** 0.0 ----------------------------- Multilevel GGGGGAGGCGGGGAGGGAGGGGGGGGGCG consensus CC CAGAAG A CCA CG CCCAAACAT sequence CT CA C AG A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSGGVDRVVGVGVVGGGRGGSGSGGGGMK MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chr8:145560331-145560431 + 33 8.41e-14 ggcggcggcg gcggcggcggcggcggcggGCGGGGGGCG GGGGTCCTGG chr6:37665509-37665609 - 61 7.61e-11 GAGGAGGGAG GAGGAAGAGAGGGAGGGAGGCGGGAGGAG CGCGGAATGA chr14:99947435-99947535 + 38 2.92e-10 AGCCACTGAC CCGCGGGGCGGGCGGGGAGGAGAGCGGCG GCTCGTTCCT chr15:72611995-72612095 + 20 6.45e-10 AGGGGGAGGG GGCGGAGCCCGGGCGGAGAGGGCGGGGGG CTGCCCAGGG chr19:4173032-4173132 + 71 1.59e-09 GCGGCGGCGG GCGGAGTGCGGGGAGGCAGGCGTGGCGCT T chr6:43214292-43214392 + 61 1.59e-09 GGGACAGAGG GAGGGTAGCGGGGAGGGAGGCGAGGACCT GGAGACTTGT chr3:133292080-133292180 - 65 2.84e-09 AGACGGG GCGGAGTCCAAGCATGGGGGCGGGGAGAG GAGGGCATAT chr13:53422688-53422788 - 36 2.84e-09 GTCAGAGGCA GGCGGAGGGGCGACGCGAGGGGGAGGCGG CCATTGGCTA chr4:40752935-40753035 - 20 3.76e-09 AAAACCTGGT GTGAATGAGGGGAAGGGAGGAGGAGGGCT GCATTCCCCA chr5:175298363-175298463 + 50 4.32e-09 GTCGGTGCTG GCCGAGGGCCGGGAGGGCGGAGCTGGGCT GTGGGCAACA chr3:42742884-42742984 + 68 8.52e-09 CCCAGGAGTA GCGGATGTggggccaggcggggccaggcg gggc chr2:114646841-114646941 + 66 1.26e-08 CAGGTCGGCC CTGGGAGGTGGGGGTTGGGGGGCAGGGCT GCATTC chr12:119591432-11959153 - 3 1.64e-08 AGGAAGAAGG CCCGAGAACGGGGAGGCGGGGCCAGAGAG GA chr15:89955993-89956093 - 1 1.64e-08 TCATGTCAGG GGGGAAGAGGGGTCAGTAGGTCGGGGGCG chr10:30721844-30721944 + 58 1.64e-08 AGCTAGGACT GAGGGTTAGCGGTAGGCGGGAGCGGGGAG ATAGTACAAG chr12:57635426-57635526 - 55 1.86e-08 ATGCTGGTGT GCGGATGCCGAGAAGCAGGGAGAGCGGCT GTTCTCCCCC chr19:46087485-46087585 - 53 2.11e-08 CCAGTAGTGA GGGCGGGGCGGGGCGTAAGGGGCGGGTCA AGGAGCCACC chr22:43845163-43845263 - 54 2.39e-08 ACAACACTGA GAGCCTACTTGGAGGGGGGGCGGGGGGGG GTTGGCACTG chr20:30556178-30556278 - 33 2.39e-08 TGCAGAGGCG GCAGCAGCGGCGGCGGTAGGCGCTGGCCG AGGAGGGCGC chrX:73479548-73479648 - 45 4.98e-08 CCAGGAACCT GTGGGGAAAGGGCAAGAAGGCCCGGGGCA TCTCCATGTT chr5:142473564-142473664 - 1 5.61e-08 AGTCGGGATT AGGGAAAGAAAGCCGCGGGGGCGGGGGAG chr7:154861581-154861681 + 47 6.31e-08 CCCCAAAGCC GCGCGCTCTGAGCCAGGAGGCGGGGAGAG ATGGCCTTAT chr20:61747601-61747701 + 15 7.10e-08 AGCACAGCTG CAGGGAGCTGCGCGGGGGGAGCCGCAGAG CTGGGCACTT chr19:50528646-50528746 - 54 8.95e-08 GCGTTCCAAA GCGGCTAGAACGGAGGGGAGGGGGATGAG CAATGAGGGA chr3:120626757-120626857 + 70 1.26e-07 GAAGCAGGGC GGGGCAAGCTAggggccggcccgggggcg gg chr10:130339315-13033941 - 29 1.41e-07 AAAAGGCAGC CCGGGAAATGAGCAGGGGCGCGCTGACCT TTAGCGAGAC chr1:37609472-37609572 - 61 1.58e-07 GGGGTTTGCG GGTGAGGGTTGGGGGAGGGGGGCAGGGGG AGGTGTGTTG chr5:175224778-175224878 + 53 1.76e-07 gattgtctcc gcggaagacaaggcctagggggcaggggt gattcgccca chr11:120107016-12010711 + 5 2.19e-07 AGAG GTGGGGTAAGGGAGGGAGGGAGGGATGAT TTGCATTTAA chr20:56804509-56804609 + 10 2.44e-07 AATACAAGC GCCGAAGTGACGGGGGCGGGAGCTAGGAG GGCGAGGGGA chr20:10199717-10199817 + 17 2.72e-07 CTGCAGGCTG GCGGGAGGCGGGCGGGTCGTGCCGGGTGG GAGGGCTCTG chr6:105403937-105404037 - 67 3.03e-07 GGGGA GGGGATCGCCAGGCAGGGGAGGTGAAGAG GAGCCGCCAG chr1:180991787-180991887 - 53 4.61e-07 TTCGTGATTG GCCGCGGCCGAGGGTCCCGGGGGTGGGGT CAGGCCCTCC chr9:136324629-136324729 - 47 4.61e-07 TTATTGTAGG GGGCGGGACCCGCAGGCTGCGGCGAGGAG CTGGGGGTGG chr3:170767617-170767717 + 4 5.11e-07 GAA GTTGGGGAGTGGGGGTGAGGTGGGGAGCT ACCATACCAA chr1:164527946-164528046 + 5 6.27e-07 GCGC CGTGAGGAAAGTAGGGGAGGAGGGGGCCG GTCCTTTATC chr19:39902844-39902944 + 45 6.27e-07 TGAGCCCCGG CGACAGCGGGGGAGGGGAAGCCCCGGGCG ACCGCCCCCC chr6:99235805-99235905 - 59 6.93e-07 AGGAAGAAAG GCGCGAGGACAGCAGGGAAGGGAGCCCAG AGGAAAAACG chr8:25316019-25316119 + 46 6.93e-07 CATACGAGGG CGGGGTCTGGGGAAAGGAGGTGGAGCGCT GAAAGGGACC chr1:155246938-155247038 - 16 9.35e-07 AAGGCGGGGA GCGCAGCCTGAGCCAGGGAGAGGGCGTGG CCTAGCGTTG chr18:35144742-35144842 - 27 1.03e-06 AGCAGCGGGC GCCGATGAAGAGAAAGAGAGAGGGGATCG AGGAGACGGG chr3:184279165-184279265 + 9 1.03e-06 TTACTAAT CGCCAATGGGCGCCAGGAGGCGGGGTTCT CCCTCTGATG chr2:213401000-213401100 + 40 1.14e-06 CCCAGGGAAA CGAGAAGAGACGAAGCGAGGGCGCGAGCT AGTGTCGCCT chr14:64805409-64805509 - 56 1.14e-06 AGGTCCTTAA GGGAAAAGGAAGTAAGGGCGGGGACGGAG GGAGACGACT chrX:199983-200083 + 51 1.14e-06 GGCGGCCGTG GTGCCAGGCCCGGGTGGGGGCGGCCGTGT TGCCAGGCCC chr14:93897444-93897544 + 54 1.52e-06 GTGGGGGAAG GGGGGTAGCGGCAAATCAGGGGCGGGGAA CTGTCAGTTG chr6:118227959-118228059 - 16 1.83e-06 GCACCACCGG CCTGGGACAGCGGCAGGACGCCGAGACAG GTGCCGGCCC chr19:18314882-18314982 - 2 2.21e-06 CCCGCCTCCC CGAGGCGGACAGGAGGCGGACGAGAGGCG G chr18:55021033-55021133 + 68 2.43e-06 ACAATTCTAT GGGGCTGCAAAGGCGTAGCGGGTCAGGCT GGCG chr19:15126748-15126848 + 23 2.43e-06 GGGACAGGCT GAGGGTCGAGGGTGTGGACGAGGTAGGAG ACTCAGGGAC chr9:136474521-136474621 - 33 2.66e-06 CCCAGGCCTC CAGGAGGTCGCGCGTCCCGGGCGAGAGCG GACGAGCCGT chr3:185911920-185912020 - 69 3.19e-06 ATT GTAGGGATCGAGACATCAAGGGCGGGGGT GCAGAGGATT chr20:36201313-36201413 + 56 3.49e-06 CAGCAACTCT CAGAAGAAAGGGGAAAGAGAGGCGAGGCT TTAAGAGACC chr1:164571999-164572099 - 70 3.49e-06 AC CTGCCAGCCGGGACGGGACGTGGACTGGT TCCAATGGCA chr19:11592677-11592777 - 13 3.49e-06 TGACAGTCTG GAGCCTAAAGGGCGTGCAGGAACGAGGAT TGGGTGGGGA chr12:52257635-52257735 + 57 5.91e-06 CATAAATTCT AGTCCGGCCCCGGGAGGAGGGCCACGCCT GGGCCCCACT chr17:35088151-35088251 - 3 7.63e-06 CAAGGAGTGA GTGCGTGCCTCGCCAAGACAGCGGAGGCG GG chr10:26656786-26656886 - 48 9.02e-06 TACATGAGGT GGAGAAGGCAGGAAAGTAAGCGGGCCCGT GTGCCCCTGT chr1:45956854-45956954 + 57 9.02e-06 GTGTGGGAAA GGCGGAACCGAGGAGGAGGGAATACACCT GGGGGAAACC chr15:69087699-69087799 + 25 9.02e-06 CCCCGGCTCA TAGGCTAAGCCGCCGGCGCGGGGAGGGCC CGCATTAACA chr15:68114785-68114885 + 5 9.80e-06 CTTT GAGGAGAGAGAGGAGGTACCCAGGGGCGT CTGTAGCATC chr2:48133905-48134005 - 43 1.59e-05 TTGGGGTAGG GGGGAAGCTGAAACGGCGAACCGAAGGAT TAATCACTTC chr10:71327624-71327724 - 26 1.73e-05 CGTAGATCCA GCGCGAGAGATGCGTCTGGGAGTGAGGCG TTCTCATACT chr19:46455809-46455909 - 51 1.73e-05 CGGACCCGGA AGTGCGTAAGGGAACGGAAACGCGGGGCT GGCTCCCGTT chr19:47947391-47947491 + 41 4.29e-05 ACAAGACACA GCGACACCCGCGCAAGGACAGGCGCACAC AAGACGGCCA chr7:14028641-14028741 - 22 4.29e-05 CAGAGCTGCC CGGGGTACACCGACCGCGCAGGGAAACAT CGAGAGTGTA chr12:85862637-85862737 + 5 9.30e-05 ggac cggcgttcgcatacggaggtcccgcgccg gcactggcct chr8:26435242-26435342 - 17 9.30e-05 CATCCGCTTC GAGAGAGACGAGCAGCGATTGGCCGCGAT CCTGGGATAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSGGVDRVVGVGVVGGGRGGSGSGGGGMK MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:145560331-145560431 8.4e-14 32_[+3]_39 chr6:37665509-37665609 7.6e-11 60_[-3]_11 chr14:99947435-99947535 2.9e-10 37_[+3]_34 chr15:72611995-72612095 6.4e-10 19_[+3]_52 chr19:4173032-4173132 1.6e-09 70_[+3]_1 chr6:43214292-43214392 1.6e-09 60_[+3]_11 chr3:133292080-133292180 2.8e-09 64_[-3]_7 chr13:53422688-53422788 2.8e-09 35_[-3]_36 chr4:40752935-40753035 3.8e-09 19_[-3]_52 chr5:175298363-175298463 4.3e-09 49_[+3]_22 chr3:42742884-42742984 8.5e-09 67_[+3]_4 chr2:114646841-114646941 1.3e-08 65_[+3]_6 chr12:119591432-11959153 1.6e-08 2_[-3]_69 chr15:89955993-89956093 1.6e-08 [-3]_71 chr10:30721844-30721944 1.6e-08 57_[+3]_14 chr12:57635426-57635526 1.9e-08 54_[-3]_17 chr19:46087485-46087585 2.1e-08 52_[-3]_19 chr22:43845163-43845263 2.4e-08 53_[-3]_18 chr20:30556178-30556278 2.4e-08 32_[-3]_39 chrX:73479548-73479648 5e-08 44_[-3]_27 chr5:142473564-142473664 5.6e-08 [-3]_71 chr7:154861581-154861681 6.3e-08 46_[+3]_25 chr20:61747601-61747701 7.1e-08 14_[+3]_57 chr19:50528646-50528746 9e-08 53_[-3]_18 chr3:120626757-120626857 1.3e-07 69_[+3]_2 chr10:130339315-13033941 1.4e-07 28_[-3]_43 chr1:37609472-37609572 1.6e-07 60_[-3]_11 chr5:175224778-175224878 1.8e-07 52_[+3]_19 chr11:120107016-12010711 2.2e-07 4_[+3]_67 chr20:56804509-56804609 2.4e-07 9_[+3]_62 chr20:10199717-10199817 2.7e-07 16_[+3]_55 chr6:105403937-105404037 3e-07 66_[-3]_5 chr1:180991787-180991887 4.6e-07 52_[-3]_19 chr9:136324629-136324729 4.6e-07 46_[-3]_25 chr3:170767617-170767717 5.1e-07 3_[+3]_68 chr1:164527946-164528046 6.3e-07 4_[+3]_67 chr19:39902844-39902944 6.3e-07 44_[+3]_27 chr6:99235805-99235905 6.9e-07 58_[-3]_13 chr8:25316019-25316119 6.9e-07 45_[+3]_26 chr1:155246938-155247038 9.3e-07 15_[-3]_56 chr18:35144742-35144842 1e-06 26_[-3]_45 chr3:184279165-184279265 1e-06 8_[+3]_63 chr2:213401000-213401100 1.1e-06 39_[+3]_32 chr14:64805409-64805509 1.1e-06 55_[-3]_16 chrX:199983-200083 1.1e-06 50_[+3]_21 chr14:93897444-93897544 1.5e-06 53_[+3]_18 chr6:118227959-118228059 1.8e-06 15_[-3]_56 chr19:18314882-18314982 2.2e-06 1_[-3]_70 chr18:55021033-55021133 2.4e-06 67_[+3]_4 chr19:15126748-15126848 2.4e-06 22_[+3]_49 chr9:136474521-136474621 2.7e-06 32_[-3]_39 chr3:185911920-185912020 3.2e-06 68_[-3]_3 chr20:36201313-36201413 3.5e-06 55_[+3]_16 chr1:164571999-164572099 3.5e-06 69_[-3]_2 chr19:11592677-11592777 3.5e-06 12_[-3]_59 chr12:52257635-52257735 5.9e-06 56_[+3]_15 chr17:35088151-35088251 7.6e-06 2_[-3]_69 chr10:26656786-26656886 9e-06 47_[-3]_24 chr1:45956854-45956954 9e-06 56_[+3]_15 chr15:69087699-69087799 9e-06 24_[+3]_47 chr15:68114785-68114885 9.8e-06 4_[+3]_67 chr2:48133905-48134005 1.6e-05 42_[-3]_29 chr10:71327624-71327724 1.7e-05 25_[-3]_46 chr19:46455809-46455909 1.7e-05 50_[-3]_21 chr19:47947391-47947491 4.3e-05 40_[+3]_31 chr7:14028641-14028741 4.3e-05 21_[-3]_50 chr12:85862637-85862737 9.3e-05 4_[+3]_67 chr8:26435242-26435342 9.3e-05 16_[-3]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSGGVDRVVGVGVVGGGRGGSGSGGGGMK MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSGGVDRVVGVGVVGGGRGGSGSGGGGMK width=29 seqs=68 chr8:145560331-145560431 ( 33) GCGGCGGCGGCGGCGGCGGGCGGGGGGCG 1 chr6:37665509-37665609 ( 61) GAGGAAGAGAGGGAGGGAGGCGGGAGGAG 1 chr14:99947435-99947535 ( 38) CCGCGGGGCGGGCGGGGAGGAGAGCGGCG 1 chr15:72611995-72612095 ( 20) GGCGGAGCCCGGGCGGAGAGGGCGGGGGG 1 chr19:4173032-4173132 ( 71) GCGGAGTGCGGGGAGGCAGGCGTGGCGCT 1 chr6:43214292-43214392 ( 61) GAGGGTAGCGGGGAGGGAGGCGAGGACCT 1 chr3:133292080-133292180 ( 65) GCGGAGTCCAAGCATGGGGGCGGGGAGAG 1 chr13:53422688-53422788 ( 36) GGCGGAGGGGCGACGCGAGGGGGAGGCGG 1 chr4:40752935-40753035 ( 20) GTGAATGAGGGGAAGGGAGGAGGAGGGCT 1 chr5:175298363-175298463 ( 50) GCCGAGGGCCGGGAGGGCGGAGCTGGGCT 1 chr3:42742884-42742984 ( 68) GCGGATGTGGGGCCAGGCGGGGCCAGGCG 1 chr2:114646841-114646941 ( 66) CTGGGAGGTGGGGGTTGGGGGGCAGGGCT 1 chr12:119591432-11959153 ( 3) CCCGAGAACGGGGAGGCGGGGCCAGAGAG 1 chr15:89955993-89956093 ( 1) GGGGAAGAGGGGTCAGTAGGTCGGGGGCG 1 chr10:30721844-30721944 ( 58) GAGGGTTAGCGGTAGGCGGGAGCGGGGAG 1 chr12:57635426-57635526 ( 55) GCGGATGCCGAGAAGCAGGGAGAGCGGCT 1 chr19:46087485-46087585 ( 53) GGGCGGGGCGGGGCGTAAGGGGCGGGTCA 1 chr22:43845163-43845263 ( 54) GAGCCTACTTGGAGGGGGGGCGGGGGGGG 1 chr20:30556178-30556278 ( 33) GCAGCAGCGGCGGCGGTAGGCGCTGGCCG 1 chrX:73479548-73479648 ( 45) GTGGGGAAAGGGCAAGAAGGCCCGGGGCA 1 chr5:142473564-142473664 ( 1) AGGGAAAGAAAGCCGCGGGGGCGGGGGAG 1 chr7:154861581-154861681 ( 47) GCGCGCTCTGAGCCAGGAGGCGGGGAGAG 1 chr20:61747601-61747701 ( 15) CAGGGAGCTGCGCGGGGGGAGCCGCAGAG 1 chr19:50528646-50528746 ( 54) GCGGCTAGAACGGAGGGGAGGGGGATGAG 1 chr3:120626757-120626857 ( 70) GGGGCAAGCTAGGGGCCGGCCCGGGGGCG 1 chr10:130339315-13033941 ( 29) CCGGGAAATGAGCAGGGGCGCGCTGACCT 1 chr1:37609472-37609572 ( 61) GGTGAGGGTTGGGGGAGGGGGGCAGGGGG 1 chr5:175224778-175224878 ( 53) GCGGAAGACAAGGCCTAGGGGGCAGGGGT 1 chr11:120107016-12010711 ( 5) GTGGGGTAAGGGAGGGAGGGAGGGATGAT 1 chr20:56804509-56804609 ( 10) GCCGAAGTGACGGGGGCGGGAGCTAGGAG 1 chr20:10199717-10199817 ( 17) GCGGGAGGCGGGCGGGTCGTGCCGGGTGG 1 chr6:105403937-105404037 ( 67) GGGGATCGCCAGGCAGGGGAGGTGAAGAG 1 chr1:180991787-180991887 ( 53) GCCGCGGCCGAGGGTCCCGGGGGTGGGGT 1 chr9:136324629-136324729 ( 47) GGGCGGGACCCGCAGGCTGCGGCGAGGAG 1 chr3:170767617-170767717 ( 4) GTTGGGGAGTGGGGGTGAGGTGGGGAGCT 1 chr1:164527946-164528046 ( 5) CGTGAGGAAAGTAGGGGAGGAGGGGGCCG 1 chr19:39902844-39902944 ( 45) CGACAGCGGGGGAGGGGAAGCCCCGGGCG 1 chr6:99235805-99235905 ( 59) GCGCGAGGACAGCAGGGAAGGGAGCCCAG 1 chr8:25316019-25316119 ( 46) CGGGGTCTGGGGAAAGGAGGTGGAGCGCT 1 chr1:155246938-155247038 ( 16) GCGCAGCCTGAGCCAGGGAGAGGGCGTGG 1 chr18:35144742-35144842 ( 27) GCCGATGAAGAGAAAGAGAGAGGGGATCG 1 chr3:184279165-184279265 ( 9) CGCCAATGGGCGCCAGGAGGCGGGGTTCT 1 chr2:213401000-213401100 ( 40) CGAGAAGAGACGAAGCGAGGGCGCGAGCT 1 chr14:64805409-64805509 ( 56) GGGAAAAGGAAGTAAGGGCGGGGACGGAG 1 chrX:199983-200083 ( 51) GTGCCAGGCCCGGGTGGGGGCGGCCGTGT 1 chr14:93897444-93897544 ( 54) GGGGGTAGCGGCAAATCAGGGGCGGGGAA 1 chr6:118227959-118228059 ( 16) CCTGGGACAGCGGCAGGACGCCGAGACAG 1 chr19:18314882-18314982 ( 2) CGAGGCGGACAGGAGGCGGACGAGAGGCG 1 chr18:55021033-55021133 ( 68) GGGGCTGCAAAGGCGTAGCGGGTCAGGCT 1 chr19:15126748-15126848 ( 23) GAGGGTCGAGGGTGTGGACGAGGTAGGAG 1 chr9:136474521-136474621 ( 33) CAGGAGGTCGCGCGTCCCGGGCGAGAGCG 1 chr3:185911920-185912020 ( 69) GTAGGGATCGAGACATCAAGGGCGGGGGT 1 chr20:36201313-36201413 ( 56) CAGAAGAAAGGGGAAAGAGAGGCGAGGCT 1 chr1:164571999-164572099 ( 70) CTGCCAGCCGGGACGGGACGTGGACTGGT 1 chr19:11592677-11592777 ( 13) GAGCCTAAAGGGCGTGCAGGAACGAGGAT 1 chr12:52257635-52257735 ( 57) AGTCCGGCCCCGGGAGGAGGGCCACGCCT 1 chr17:35088151-35088251 ( 3) GTGCGTGCCTCGCCAAGACAGCGGAGGCG 1 chr10:26656786-26656886 ( 48) GGAGAAGGCAGGAAAGTAAGCGGGCCCGT 1 chr1:45956854-45956954 ( 57) GGCGGAACCGAGGAGGAGGGAATACACCT 1 chr15:69087699-69087799 ( 25) TAGGCTAAGCCGCCGGCGCGGGGAGGGCC 1 chr15:68114785-68114885 ( 5) GAGGAGAGAGAGGAGGTACCCAGGGGCGT 1 chr2:48133905-48134005 ( 43) GGGGAAGCTGAAACGGCGAACCGAAGGAT 1 chr10:71327624-71327724 ( 26) GCGCGAGAGATGCGTCTGGGAGTGAGGCG 1 chr19:46455809-46455909 ( 51) AGTGCGTAAGGGAACGGAAACGCGGGGCT 1 chr19:47947391-47947491 ( 41) GCGACACCCGCGCAAGGACAGGCGCACAC 1 chr7:14028641-14028741 ( 22) CGGGGTACACCGACCGCGCAGGGAAACAT 1 chr12:85862637-85862737 ( 5) CGGCGTTCGCATACGGAGGTCCCGCGCCG 1 chr8:26435242-26435342 ( 17) GAGAGAGACGAGCAGCGATTGGCCGCGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSGGVDRVVGVGVVGGGRGGSGSGGGGMK MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 42336 bayes= 10.0755 E= 4.3e-059 -266 17 164 -424 -66 55 73 -107 -166 -74 164 -166 -192 9 164 -1273 46 -11 89 -1273 40 -291 61 -7 -7 -133 126 -124 8 41 61 -192 -24 79 26 -124 -66 -33 137 -192 15 17 94 -424 -424 -391 209 -324 -7 41 79 -224 51 55 33 -1273 -7 -233 137 -124 -266 -74 170 -143 -92 9 126 -166 76 -159 99 -424 -92 -45 161 -424 -107 -233 181 -266 -44 48 94 -224 -266 -1 173 -1273 -192 79 109 -192 -24 -133 141 -166 -24 -21 137 -1273 -34 -159 155 -224 -1273 -11 167 -166 22 113 -21 -1273 -266 -291 122 56 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSGGVDRVVGVGVVGGGRGGSGSGGGGMK MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 68 E= 4.3e-059 0.044118 0.250000 0.691176 0.014706 0.176471 0.323529 0.367647 0.132353 0.088235 0.132353 0.691176 0.088235 0.073529 0.235294 0.691176 0.000000 0.382353 0.205882 0.411765 0.000000 0.367647 0.029412 0.338235 0.264706 0.264706 0.088235 0.529412 0.117647 0.294118 0.294118 0.338235 0.073529 0.235294 0.382353 0.264706 0.117647 0.176471 0.176471 0.573529 0.073529 0.308824 0.250000 0.426471 0.014706 0.014706 0.014706 0.941176 0.029412 0.264706 0.294118 0.382353 0.058824 0.397059 0.323529 0.279412 0.000000 0.264706 0.044118 0.573529 0.117647 0.044118 0.132353 0.720588 0.102941 0.147059 0.235294 0.529412 0.088235 0.470588 0.073529 0.441176 0.014706 0.147059 0.161765 0.676471 0.014706 0.132353 0.044118 0.779412 0.044118 0.205882 0.308824 0.426471 0.058824 0.044118 0.220588 0.735294 0.000000 0.073529 0.382353 0.470588 0.073529 0.235294 0.088235 0.588235 0.088235 0.235294 0.191176 0.573529 0.000000 0.220588 0.073529 0.647059 0.058824 0.000000 0.205882 0.705882 0.088235 0.323529 0.485294 0.191176 0.000000 0.044118 0.029412 0.514706 0.411765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSGGVDRVVGVGVVGGGRGGSGSGGGGMK MEME-3 regular expression -------------------------------------------------------------------------------- [GC][GC]G[GC][GAC][AGT][GA][GAC][CGA]G[GAC]G[GCA][ACG][GA]G[GC][AG]GG[GCA][GC][GC][GA][GA][GA][GC][CA][GT] -------------------------------------------------------------------------------- Time 852.65 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:107678123-107678223 2.88e-06 28_[-1(3.76e-10)]_51 chr20:5892250-5892350 8.90e-02 15_[-3(7.57e-05)]_56 chr7:100937493-100937593 7.97e-01 100 chr17:32059255-32059355 6.85e-01 100 chr3:106173152-106173252 5.86e-02 100 chr10:114571775-11457187 3.82e-01 100 chr13:100340117-10034021 3.64e-01 100 chrX:50357311-50357411 2.65e-02 27_[-2(9.23e-06)]_58 chr5:54920928-54921028 1.46e-02 34_[-2(3.79e-05)]_51 chr18:31151983-31152083 6.68e-01 100 chr17:6207088-6207188 2.02e-07 26_[-1(5.87e-11)]_53 chr3:124091668-124091768 5.04e-03 79_[-2(2.08e-05)]_6 chr12:119304240-11930434 1.39e-05 13_[-1(6.83e-10)]_66 chr11:38347995-38348095 1.89e-02 70_[-2(1.33e-05)]_15 chr9:27399038-27399138 1.51e-01 100 chr1:243010645-243010745 6.86e-01 100 chr3:158991478-158991578 1.73e-06 17_[-1(1.04e-10)]_62 chr1:38230001-38230101 1.87e-07 17_[-1(1.51e-09)]_3_[-1(5.97e-06)]_\ 38 chr6:35707395-35707495 1.91e-02 100 chr1:223834942-223835042 5.96e-02 40_[+2(2.08e-05)]_45 chr3:66041930-66042030 3.05e-01 100 chr13:72714737-72714837 7.99e-01 100 chr10:23164993-23165093 3.42e-01 100 chr3:127177381-127177481 4.20e-02 52_[-1(3.51e-05)]_27 chr9:128105534-128105634 8.22e-02 100 chr1:74710860-74710960 6.17e-02 100 chr8:128755280-128755380 5.24e-02 100 chr3:181327867-181327967 9.88e-01 100 chr19:15126748-15126848 2.95e-09 22_[+3(2.43e-06)]_16_[+1(1.50e-10)]_\ 12 chr8:25316019-25316119 5.49e-04 45_[+3(6.93e-07)]_26 chr4:90882376-90882476 6.56e-01 100 chr1:44434035-44434135 1.25e-07 72_[-1(5.17e-11)]_7 chr9:80200102-80200202 3.93e-01 100 chr10:54683310-54683410 1.31e-01 100 chr1:204806611-204806711 2.42e-05 18_[+1(3.42e-09)]_61 chr8:104608012-104608112 2.97e-02 40_[-2(1.49e-05)]_45 chr12:111649996-11165009 5.39e-07 66_[-1(2.72e-11)]_13 chr5:6686991-6687091 8.16e-01 100 chr16:30039827-30039927 8.44e-01 100 chr4:135066558-135066658 5.08e-03 43_[+2(1.67e-05)]_42 chr20:16472709-16472809 2.47e-01 100 chr2:200733704-200733804 5.74e-01 100 chr16:89103794-89103894 4.58e-01 100 chr20:44485997-44486097 4.77e-01 100 chr4:165874588-165874688 9.27e-03 49_[-2(1.18e-05)]_36 chr5:113695980-113696080 4.79e-02 76_[+2(1.04e-05)]_9 chr6:122773431-122773531 7.97e-01 100 chr6:52054749-52054849 9.84e-03 36_[+2(1.47e-06)]_49 chr17:26499856-26499956 7.32e-01 100 chrX:22061370-22061470 8.33e-02 38_[+2(8.38e-05)]_47 chr4:58085666-58085766 2.79e-02 5_[-2(7.12e-06)]_80 chr1:26745400-26745500 5.61e-02 100 chr7:84541214-84541314 6.20e-01 100 chr5:106361914-106362014 3.06e-02 1_[+2(3.44e-05)]_29_[-2(2.83e-05)]_\ 40 chr18:76473130-76473230 2.11e-06 45_[+1(3.09e-10)]_34 chr3:123936416-123936516 3.85e-08 53_[-1(6.49e-11)]_26 chr2:153806725-153806825 9.49e-01 100 chr16:10479739-10479839 5.04e-02 100 chr9:136474521-136474621 2.13e-10 3_[+1(2.30e-11)]_8_[-3(2.66e-06)]_9_\ [-3(2.02e-05)]_1 chr15:72611995-72612095 1.45e-06 19_[+3(6.45e-10)]_11_[+3(5.11e-07)]_\ 12 chr2:63815835-63815935 8.80e-01 100 chr4:14446613-14446713 2.13e-02 71_[-2(1.04e-05)]_14 chr3:139387159-139387259 2.78e-01 100 chr22:26655545-26655645 1.00e-05 30_[+1(1.17e-09)]_49 chr13:84300057-84300157 2.78e-01 100 chr1:186063691-186063791 4.42e-01 100 chr16:23038133-23038233 6.47e-06 25_[-1(5.06e-10)]_54 chr5:120143567-120143667 4.60e-01 100 chr5:95806980-95807080 1.10e-01 43_[-2(9.86e-05)]_16_[+2(5.00e-05)]_\ 11 chr4:34187806-34187906 1.73e-02 47_[+2(2.31e-05)]_38 chr3:54222221-54222321 6.28e-01 100 chr1:89921854-89921954 3.73e-01 100 chr22:33458449-33458549 7.58e-01 100 chr10:108294866-10829496 2.37e-01 100 chr4:176335722-176335822 9.16e-01 100 chr9:13596874-13596974 6.44e-01 100 chr13:82244257-82244357 4.44e-01 100 chr3:191905281-191905381 1.09e-05 40_[-1(3.97e-09)]_39 chr11:84425176-84425276 8.73e-02 53_[-2(6.51e-05)]_32 chr3:152811453-152811553 1.22e-03 28_[+2(3.18e-07)]_15_[+2(6.51e-05)]_\ 27 chr16:1238741-1238841 3.46e-09 59_[-1(2.32e-12)]_20 chr9:3362076-3362176 1.63e-01 41_[+2(5.97e-05)]_44 chr14:93380364-93380464 5.33e-01 100 chr6:35772712-35772812 3.66e-02 100 chr1:80623611-80623711 1.18e-02 74_[-2(4.03e-06)]_11 chr3:18385764-18385864 9.45e-02 100 chr9:17397062-17397162 4.59e-01 100 chr4:146408976-146409076 7.18e-01 100 chr8:60029266-60029366 6.46e-01 100 chr1:87894239-87894339 7.61e-01 100 chr1:55698476-55698576 4.77e-01 100 chr10:30721844-30721944 2.49e-05 57_[+3(1.64e-08)]_14 chr8:79065424-79065524 4.11e-01 100 chr17:65693202-65693302 4.73e-02 70_[-3(5.72e-05)]_1 chr7:100701690-100701790 6.21e-08 45_[-1(1.08e-11)]_34 chr17:35462849-35462949 8.87e-01 100 chr9:128844780-128844880 7.88e-01 100 chr3:2346215-2346315 2.35e-02 100 chrX:40704547-40704647 1.60e-02 13_[-2(4.70e-06)]_72 chr19:39902844-39902944 1.68e-03 44_[+3(6.27e-07)]_27 chr13:96652439-96652539 2.21e-02 38_[+2(1.49e-05)]_47 chr3:104238308-104238408 7.92e-02 65_[-1(9.01e-05)]_14 chr10:21572099-21572199 7.64e-02 100 chr4:165788044-165788144 3.84e-01 100 chr3:15674798-15674898 8.76e-01 100 chrX:199983-200083 3.24e-03 50_[+3(1.14e-06)]_21 chr18:47088177-47088277 4.82e-03 45_[+2(1.86e-05)]_40 chrY:14811920-14812020 4.17e-01 100 chr11:104684341-10468444 9.20e-01 100 chr6:71594723-71594823 8.11e-01 100 chr4:185114558-185114658 1.42e-02 78_[-2(9.23e-06)]_7 chr1:204684169-204684269 1.08e-02 1_[-3(1.73e-05)]_70 chr13:81714736-81714836 9.78e-01 100 chr14:62145678-62145778 4.63e-01 100 chr1:236451150-236451250 4.18e-01 100 chrY:16343621-16343721 2.86e-06 38_[-1(1.95e-09)]_41 chr7:50881995-50882095 1.42e-02 72_[+2(2.56e-05)]_13 chr4:124339393-124339493 1.27e-01 100 chr11:85237594-85237694 2.84e-02 82_[-2(1.49e-05)]_3 chr7:1616392-1616492 2.91e-01 100 chr16:83874171-83874271 8.88e-01 100 chr5:134951268-134951368 1.55e-01 100 chr18:60418456-60418556 7.08e-02 30_[-1(8.53e-05)]_49 chrY:10022333-10022433 7.06e-02 59_[-3(3.99e-05)]_12 chr12:99290586-99290686 5.46e-01 100 chr1:61371731-61371831 2.31e-01 100 chr8:70371785-70371885 6.19e-01 100 chr5:158526945-158527045 6.84e-01 100 chr8:132999331-132999431 2.28e-02 19_[-2(8.13e-06)]_66 chr2:114646841-114646941 8.63e-07 8_[+2(2.83e-05)]_42_[+3(1.26e-08)]_\ 6 chr16:26231906-26232006 8.35e-01 100 chr20:44669306-44669406 1.34e-07 69_[+1(1.50e-10)]_10 chr3:184279165-184279265 3.85e-03 8_[+3(1.03e-06)]_63 chr3:10501657-10501757 4.75e-03 75_[+1(2.15e-05)]_4 chr11:105543661-10554376 5.51e-03 39_[+2(4.56e-05)]_46 chr5:12624715-12624815 9.74e-01 100 chr6:116428197-116428297 5.15e-01 100 chr11:22361730-22361830 2.70e-01 100 chr15:89955993-89956093 1.33e-04 [-3(1.64e-08)]_71 chr2:230638985-230639085 5.58e-01 100 chr2:204598883-204598983 9.16e-02 29_[+2(3.44e-05)]_56 chr12:33044964-33045064 2.72e-01 100 chr2:238239272-238239372 3.20e-02 64_[-2(6.19e-06)]_21 chr7:76302666-76302766 1.48e-02 24_[-2(5.00e-05)]_29_[+2(5.00e-05)]_\ 17 chr20:30556178-30556278 1.20e-04 32_[-3(2.39e-08)]_39 chr5:120187345-120187445 6.47e-01 100 chr10:95826192-95826292 5.89e-01 100 chr20:56804509-56804609 2.18e-04 24_[+3(1.76e-07)]_47 chr2:139914280-139914380 9.40e-01 100 chr1:73642645-73642745 5.32e-02 17_[-2(2.08e-05)]_68 chr5:175298363-175298463 3.54e-06 49_[+3(4.32e-09)]_22 chr17:25672483-25672583 8.75e-03 85_[+2(2.11e-06)] chr4:90428501-90428601 2.93e-03 67_[-2(3.18e-07)]_18 chr4:116517530-116517630 4.92e-02 1_[-2(2.08e-05)]_84 chr18:18967360-18967460 7.66e-01 100 chr12:130256477-13025657 9.88e-01 100 chr15:71342410-71342510 5.96e-01 100 chr19:11592677-11592777 3.45e-04 12_[-3(3.49e-06)]_16_[-1(4.84e-05)]_\ 22 chr9:138863784-138863884 1.75e-01 100 chr3:117041738-117041838 1.16e-06 45_[+1(2.94e-09)]_34 chr17:33030640-33030740 4.83e-01 100 chr4:183264931-183265031 2.21e-02 100 chr12:89746650-89746750 5.72e-01 100 chr13:93878062-93878162 7.11e-05 65_[-2(4.09e-08)]_20 chr4:113669417-113669517 9.86e-01 100 chr2:8820859-8820959 7.49e-02 68_[+2(9.86e-05)]_17 chr3:85939324-85939424 6.42e-02 24_[-2(4.16e-05)]_61 chr17:35054401-35054501 1.35e-05 55_[-1(9.85e-10)]_24 chr20:10599708-10599808 3.32e-01 100 chr6:43214292-43214392 1.42e-05 60_[+3(1.59e-09)]_11 chr1:91391599-91391699 4.89e-01 100 chr10:34817259-34817359 7.46e-01 100 chr2:170408393-170408493 2.71e-04 37_[-2(2.94e-06)]_48 chr5:23235439-23235539 8.07e-01 100 chr11:27494222-27494322 3.73e-04 20_[+2(2.31e-05)]_65 chr6:121940228-121940328 6.37e-02 45_[+2(7.09e-05)]_40 chr19:4173032-4173132 1.60e-12 9_[+3(4.42e-08)]_6_[-1(7.32e-11)]_5_\ [+3(1.59e-09)]_1 chr5:95638032-95638132 4.02e-02 55_[+2(1.04e-05)]_30 chr19:34575727-34575827 6.21e-01 100 chr12:52257635-52257735 5.68e-03 56_[+3(5.91e-06)]_15 chr3:42742884-42742984 4.44e-05 67_[+3(8.52e-09)]_4 chrX:51471365-51471465 4.23e-02 30_[+2(9.23e-06)]_55 chr12:119195300-11919540 1.96e-05 64_[+1(1.79e-09)]_15 chr17:10778599-10778699 2.77e-07 55_[+1(3.43e-10)]_24 chr1:109827656-109827756 4.53e-02 15_[-2(2.83e-05)]_70 chr7:49129352-49129452 7.14e-01 100 chr20:47139683-47139783 6.31e-06 13_[+1(3.76e-10)]_66 chr6:34083118-34083218 3.17e-08 2_[-3(6.59e-05)]_10_[-1(7.32e-11)]_\ 38 chr10:15514963-15515063 3.88e-01 100 chr3:115044212-115044312 8.73e-01 100 chr2:75076729-75076829 6.78e-04 1_[+3(4.96e-05)]_17_[+2(2.83e-05)]_\ 38 chr15:90942424-90942524 2.81e-04 64_[+2(2.31e-08)]_21 chr3:17801303-17801403 5.81e-01 100 chr2:192844050-192844150 1.94e-03 73_[+2(3.42e-06)]_12 chr8:76061380-76061480 4.63e-01 100 chr11:134860520-13486062 1.29e-02 54_[-2(4.03e-06)]_31 chr6:21399239-21399339 4.30e-02 15_[-2(2.83e-05)]_70 chr19:38993736-38993836 1.91e-01 52_[-2(9.86e-05)]_33 chr16:7296505-7296605 9.86e-02 100 chr18:70111918-70112018 2.68e-02 24_[+2(4.56e-05)]_61 chr6:24127052-24127152 9.83e-07 24_[-1(2.80e-10)]_55 chr3:85675946-85676046 9.35e-03 70_[-2(2.11e-06)]_15 chr5:92947716-92947816 6.75e-02 100 chr1:37609472-37609572 2.82e-10 26_[-1(4.16e-10)]_13_[-3(1.58e-07)]_\ 11 chr1:147751685-147751785 2.12e-01 100 chr1:200003839-200003939 2.75e-01 100 chr18:35070145-35070245 8.53e-02 61_[-2(2.56e-05)]_24 chr13:36872816-36872916 7.87e-02 38_[-2(2.31e-05)]_47 chr5:9833079-9833179 6.04e-03 13_[-2(2.83e-05)]_72 chr10:91847480-91847580 8.46e-01 100 chr10:13442564-13442664 3.00e-04 16_[-2(1.33e-05)]_29_[+2(4.09e-08)]_\ 25 chr9:136324629-136324729 6.96e-04 46_[-3(4.61e-07)]_25 chr10:73104320-73104420 4.65e-03 62_[-2(1.67e-05)]_23 chr6:62737195-62737295 7.74e-02 64_[+2(4.16e-05)]_21 chr3:181840585-181840685 2.43e-02 47_[+2(3.44e-05)]_38 chr3:174257910-174258010 8.43e-01 100 chr9:127355915-127356015 8.47e-02 100 chr2:148795290-148795390 9.24e-02 76_[-2(7.72e-05)]_9 chr6:50526235-50526335 2.53e-01 100 chr4:42296347-42296447 2.31e-01 100 chr19:46087485-46087585 1.57e-04 52_[-3(2.11e-08)]_19 chr9:37226295-37226395 6.65e-02 38_[+2(1.86e-05)]_24_[-2(3.79e-05)]_\ 8 chr8:34704397-34704497 2.00e-01 100 chr17:65970915-65971015 2.34e-01 100 chr4:92499055-92499155 7.89e-02 45_[+2(3.12e-05)]_40 chr1:188058348-188058448 7.18e-01 100 chr3:10202561-10202661 1.61e-03 40_[+2(2.11e-06)]_45 chr12:18473259-18473359 2.54e-02 59_[-2(5.41e-06)]_26 chr3:184624968-184625068 5.74e-01 100 chr12:81176649-81176749 3.31e-02 21_[-2(3.44e-05)]_64 chr7:9978399-9978499 1.68e-01 100 chr12:9903892-9903992 5.75e-01 100 chr7:66461555-66461655 3.05e-02 100 chr2:178044079-178044179 1.27e-01 100 chr2:176717912-176718012 9.80e-02 100 chr3:77328049-77328149 1.97e-02 69_[+2(2.08e-05)]_16 chr12:41969700-41969800 5.65e-01 100 chr4:140381694-140381794 6.50e-02 10_[-2(2.56e-05)]_75 chr1:164571999-164572099 7.36e-03 69_[-3(3.49e-06)]_2 chr20:43408790-43408890 4.43e-07 66_[+1(4.56e-11)]_13 chr20:9640962-9641062 8.09e-07 7_[+1(8.17e-11)]_72 chr1:18582820-18582920 2.86e-07 56_[+1(1.50e-10)]_23 chr6:92898217-92898317 4.90e-01 100 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chr11:17568493-17568593 2.66e-01 100 chr19:5404057-5404157 1.32e-07 60_[+1(2.07e-10)]_19 chr2:29516713-29516813 8.14e-01 100 chr10:59935819-59935919 8.58e-06 43_[-1(5.64e-10)]_36 chr15:26965668-26965768 5.70e-01 100 chr3:63053348-63053448 1.13e-01 100 chr1:102462485-102462585 3.17e-01 100 chr6:107922314-107922414 2.01e-01 100 chr2:63973770-63973870 1.35e-01 100 chr8:135533466-135533566 3.24e-04 85_[-2(1.33e-05)] chr13:83790618-83790718 3.21e-01 100 chr3:185911920-185912020 5.75e-03 68_[-3(3.19e-06)]_3 chr12:9063743-9063843 6.23e-01 100 chr3:184617999-184618099 3.00e-02 61_[+2(9.23e-06)]_7_[-2(3.44e-05)]_\ 2 chr10:71327624-71327724 1.08e-07 25_[-3(1.73e-05)]_17_[-1(1.17e-09)]_\ 8 chr6:8552346-8552446 5.03e-04 35_[+1(8.13e-06)]_44 chr6:121940951-121941051 2.74e-01 100 chr18:40323825-40323925 5.06e-01 100 chr11:31259990-31260090 2.84e-01 100 chr3:192162567-192162667 2.76e-02 79_[+2(5.41e-06)]_6 chr13:100448506-10044860 2.12e-07 40_[+1(3.16e-11)]_39 chr5:95767998-95768098 7.02e-01 100 chr8:51364746-51364846 2.36e-02 19_[+2(4.70e-06)]_66 chr6:160661234-160661334 1.38e-01 71_[-2(7.09e-05)]_14 chr9:7052675-7052775 8.11e-01 100 chr11:66185490-66185590 1.64e-01 100 chrX:91365466-91365566 5.09e-02 79_[-2(3.12e-05)]_6 chr13:89416391-89416491 2.87e-02 47_[+2(1.49e-05)]_38 chr4:113261241-113261341 2.31e-01 100 chr9:128640723-128640823 5.75e-01 100 chr6:158889185-158889285 2.43e-01 100 chr14:57692733-57692833 4.27e-02 18_[-2(2.31e-05)]_67 chr3:120626757-120626857 1.03e-03 24_[-3(6.27e-07)]_16_[+3(1.26e-07)]_\ 2 chrX:123364566-123364666 6.16e-02 36_[-2(1.49e-05)]_49 chr19:47164607-47164707 1.98e-01 100 chr20:10332948-10333048 1.83e-01 100 chr12:90277062-90277162 3.36e-01 100 chr3:180473411-180473511 8.86e-01 100 chr6:111410579-111410679 4.64e-01 100 chr22:25271902-25272002 5.50e-06 37_[-1(1.17e-09)]_42 chr12:85862637-85862737 9.01e-02 26_[-3(4.61e-05)]_45 chr4:110107643-110107743 1.04e-01 62_[+2(5.00e-05)]_23 chr2:206140866-206140966 3.12e-01 100 chr19:50528646-50528746 4.54e-04 53_[-3(8.95e-08)]_18 chr20:1986514-1986614 2.03e-02 69_[-2(1.86e-05)]_16 chr17:35088151-35088251 1.25e-07 2_[-3(7.63e-06)]_31_[-2(4.19e-09)]_\ 23 chr2:208249646-208249746 6.61e-01 100 chr15:80681679-80681779 4.40e-02 2_[+2(9.23e-06)]_83 chr20:25061621-25061721 1.61e-01 100 chr7:101580148-101580248 1.30e-02 100 chr4:40752935-40753035 7.06e-06 19_[-3(3.76e-09)]_52 chr1:147012415-147012515 4.63e-01 100 chr7:112548190-112548290 8.19e-01 100 chr18:35144742-35144842 4.83e-03 26_[-3(1.03e-06)]_45 chr6:4887598-4887698 7.40e-01 100 chr6:37665509-37665609 8.02e-07 60_[-3(7.61e-11)]_11 chr3:144309617-144309717 3.30e-01 100 chr7:66644081-66644181 7.11e-03 76_[+2(1.75e-06)]_9 chr12:66217628-66217728 1.26e-01 23_[+1(9.78e-05)]_56 chr12:131432640-13143274 1.52e-01 21_[+2(7.09e-05)]_64 chr2:72946443-72946543 3.82e-01 100 chr18:60467616-60467716 6.08e-01 100 chr18:13712512-13712612 1.84e-01 100 chr18:44077137-44077237 4.48e-07 33_[+1(4.56e-11)]_46 chr5:152655726-152655826 4.83e-07 41_[-1(5.17e-11)]_38 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: surya.stanford.edu ********************************************************************************