Invoking: getsize seqnotcut_memechip_out/seq-not-cut.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.476816 Invoking: fasta-most -min 50 < seqnotcut_memechip_out/seq-not-cut.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.383691 Invoking: fasta-center -dna -len 100 < seqnotcut_memechip_out/seq-not-cut.fa 1> seqnotcut_memechip_out/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.762191 Invoking: fasta-shuffle-letters seqnotcut_memechip_out/seqs-centered seqnotcut_memechip_out/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.40347 Invoking: fasta-subsample seqnotcut_memechip_out/seqs-centered 600 -rest seqnotcut_memechip_out/seqs-discarded -seed 1 1> seqnotcut_memechip_out/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.618262 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/background Finished invoke: name: bg status: 0 time: 0.091494 Invoking: meme seqnotcut_memechip_out/seqs-sampled -oc seqnotcut_memechip_out/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile seqnotcut_memechip_out/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 897.760105 Invoking: dreme -v 1 -oc seqnotcut_memechip_out/dreme_out -png -dna -p seqnotcut_memechip_out/seqs-centered -n seqnotcut_memechip_out/seqs-shuffled Finished invoke: name: dreme status: 0 time: 5251.623315 Invoking: centrimo -seqlen 210 -verbosity 1 -oc seqnotcut_memechip_out/centrimo_out -bfile seqnotcut_memechip_out/background seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 5.563003 Invoking: tomtom -verbosity 1 -text -thresh 0.1 seqnotcut_memechip_out/combined.meme seqnotcut_memechip_out/combined.meme 1> seqnotcut_memechip_out/motif_alignment.txt Finished invoke: name: align status: 0 time: 1.162861 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_1 -bgfile seqnotcut_memechip_out/background -primary ATGYADAT seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.522894 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_2 -bgfile seqnotcut_memechip_out/background -primary CYWTTGTYATGCAAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.566441 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_3 -bgfile seqnotcut_memechip_out/background -primary DAAATR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.457464 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_4 -bgfile seqnotcut_memechip_out/background -primary CTGKGD seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.566505 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_5 -bgfile seqnotcut_memechip_out/background -primary CDGSAG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.572817 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_6 -bgfile seqnotcut_memechip_out/background -primary TTYCTB seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.504979 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_7 -bgfile seqnotcut_memechip_out/background -primary CBCCCSCSBCBCSCCYTCCCKSVVBSBCC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.552456 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_8 -bgfile seqnotcut_memechip_out/background -primary CCCCDCCC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 1.325658 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_9 -bgfile seqnotcut_memechip_out/background -primary DYWTTYTTTTTTTTTTTTTTTYTYTTDSA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.503308 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_10 -bgfile seqnotcut_memechip_out/background -primary ACGT seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.442932 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_11 -bgfile seqnotcut_memechip_out/background -primary ACACAYAC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.470144 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_12 -bgfile seqnotcut_memechip_out/background -primary AGRKGGCG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.44038 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_13 -bgfile seqnotcut_memechip_out/background -primary ACARWG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.452036 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_14 -bgfile seqnotcut_memechip_out/background -primary RGARA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.452579 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_15 -bgfile seqnotcut_memechip_out/background -primary CCDCCTCC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.441618 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_16 -bgfile seqnotcut_memechip_out/background -primary CTGKAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.475297 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_17 -bgfile seqnotcut_memechip_out/background -primary RCCTGGS seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.471054 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_18 -bgfile seqnotcut_memechip_out/background -primary CTSCCWC seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 1.153544 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_19 -bgfile seqnotcut_memechip_out/background -primary AYATTY seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo19 status: 0 time: 0.475176 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_20 -bgfile seqnotcut_memechip_out/background -primary AGCCACYG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo20 status: 0 time: 0.491791 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_21 -bgfile seqnotcut_memechip_out/background -primary RCCACCAY seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo21 status: 0 time: 0.492009 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_22 -bgfile seqnotcut_memechip_out/background -primary TTTAAAAR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo22 status: 0 time: 0.449451 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_23 -bgfile seqnotcut_memechip_out/background -primary CVGGGA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo23 status: 0 time: 0.434922 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_24 -bgfile seqnotcut_memechip_out/background -primary ATGAATR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo24 status: 0 time: 0.423697 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_25 -bgfile seqnotcut_memechip_out/background -primary AAAKGCAG seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo25 status: 0 time: 0.463569 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_26 -bgfile seqnotcut_memechip_out/background -primary CACSGTR seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo26 status: 0 time: 0.502465 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_27 -bgfile seqnotcut_memechip_out/background -primary TATGTAA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo27 status: 0 time: 0.478619 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_28 -bgfile seqnotcut_memechip_out/background -primary CTACAGGY seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo28 status: 0 time: 0.54484 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_29 -bgfile seqnotcut_memechip_out/background -primary CCACTAGA seqnotcut_memechip_out/seq-not-cut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo29 status: 0 time: 0.802775 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_1 --bgfile seqnotcut_memechip_out/background --motif ATGYADAT seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo1 status: 0 time: 2.68705 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_2 --bgfile seqnotcut_memechip_out/background --motif CYWTTGTYATGCAAA seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo2 status: 0 time: 3.063791 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_3 --bgfile seqnotcut_memechip_out/background --motif DAAATR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo3 status: 0 time: 2.645956 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_4 --bgfile seqnotcut_memechip_out/background --motif CTGKGD seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo4 status: 0 time: 2.644372 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_5 --bgfile seqnotcut_memechip_out/background --motif CDGSAG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo5 status: 0 time: 2.637868 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_6 --bgfile seqnotcut_memechip_out/background --motif TTYCTB seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo6 status: 0 time: 3.096209 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_7 --bgfile seqnotcut_memechip_out/background --motif CBCCCSCSBCBCSCCYTCCCKSVVBSBCC seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo7 status: 0 time: 3.87728 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_8 --bgfile seqnotcut_memechip_out/background --motif CCCCDCCC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo8 status: 0 time: 2.959061 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_9 --bgfile seqnotcut_memechip_out/background --motif DYWTTYTTTTTTTTTTTTTTTYTYTTDSA seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo9 status: 0 time: 3.443996 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_10 --bgfile seqnotcut_memechip_out/background --motif ACGT seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo10 status: 0 time: 2.346197 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_11 --bgfile seqnotcut_memechip_out/background --motif ACACAYAC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo11 status: 0 time: 2.723871 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_12 --bgfile seqnotcut_memechip_out/background --motif AGRKGGCG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo12 status: 0 time: 2.667265 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_13 --bgfile seqnotcut_memechip_out/background --motif ACARWG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo13 status: 0 time: 2.593058 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_14 --bgfile seqnotcut_memechip_out/background --motif RGARA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo14 status: 0 time: 2.897193 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_15 --bgfile seqnotcut_memechip_out/background --motif CCDCCTCC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo15 status: 0 time: 2.712626 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_16 --bgfile seqnotcut_memechip_out/background --motif CTGKAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo16 status: 0 time: 2.695369 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_17 --bgfile seqnotcut_memechip_out/background --motif RCCTGGS seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo17 status: 0 time: 2.865975 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_18 --bgfile seqnotcut_memechip_out/background --motif CTSCCWC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo18 status: 0 time: 3.381419 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_19 --bgfile seqnotcut_memechip_out/background --motif AYATTY seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo19 status: 0 time: 2.790341 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_20 --bgfile seqnotcut_memechip_out/background --motif AGCCACYG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo20 status: 0 time: 2.95936 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_21 --bgfile seqnotcut_memechip_out/background --motif RCCACCAY seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo21 status: 0 time: 2.779407 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_22 --bgfile seqnotcut_memechip_out/background --motif TTTAAAAR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo22 status: 0 time: 2.673097 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_23 --bgfile seqnotcut_memechip_out/background --motif CVGGGA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo23 status: 0 time: 2.565403 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_24 --bgfile seqnotcut_memechip_out/background --motif ATGAATR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo24 status: 0 time: 2.939733 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_25 --bgfile seqnotcut_memechip_out/background --motif AAAKGCAG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo25 status: 0 time: 2.654862 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_26 --bgfile seqnotcut_memechip_out/background --motif CACSGTR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo26 status: 0 time: 2.938787 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_27 --bgfile seqnotcut_memechip_out/background --motif TATGTAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo27 status: 0 time: 2.576883 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_28 --bgfile seqnotcut_memechip_out/background --motif CTACAGGY seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo28 status: 0 time: 3.252636 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_29 --bgfile seqnotcut_memechip_out/background --motif CCACTAGA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/seq-not-cut.fa Finished invoke: name: fimo29 status: 0 time: 2.64286 Writing output Invoking: meme-chip_html_to_tsv seqnotcut_memechip_out/meme-chip.html seqnotcut_memechip_out/summary.tsv Finished invoke: name: summary status: 0 time: 0.324078 Done