******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= memechip_out/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr1:15710969-15711159 1.0000 100 chr11:100849318-10084942 1.0000 100 chr12:57636546-57636643 1.0000 98 chr7:150433139-150433348 1.0000 100 chr1:202536887-202537096 1.0000 100 chr4:106476532-106476741 1.0000 100 chr1:183372764-183372973 1.0000 100 chr4:113573462-113573671 1.0000 100 chr7:83907090-83907299 1.0000 100 chr13:94796311-94796520 1.0000 100 chr13:35474513-35474722 1.0000 100 chr16:19893521-19893730 1.0000 100 chr6:166778828-166779037 1.0000 100 chr8:40177527-40177736 1.0000 100 chr7:37288032-37288241 1.0000 100 chrX:73067050-73067259 1.0000 100 chr2:111446477-111446686 1.0000 100 chr5:95770048-95770257 1.0000 100 chr1:17796686-17796739 1.0000 54 chr3:29517400-29517609 1.0000 100 chr17:32077950-32078159 1.0000 100 chr2:214991982-214992191 1.0000 100 chr4:124874120-124874329 1.0000 100 chr12:130255929-13025613 1.0000 100 chr13:74341366-74341575 1.0000 100 chr6:21186269-21186478 1.0000 100 chr1:53441977-53442186 1.0000 100 chr1:1711535-1711744 1.0000 100 chr13:79232439-79232648 1.0000 100 chr2:122437846-122438055 1.0000 100 chr15:52684554-52684763 1.0000 100 chr6:76830109-76830318 1.0000 100 chr12:39845850-39846059 1.0000 100 chr10:121446855-12144706 1.0000 100 chr3:73812116-73812325 1.0000 100 chr12:119419088-11941929 1.0000 100 chr16:25867224-25867433 1.0000 100 chr8:72628500-72628709 1.0000 100 chr2:81101600-81101809 1.0000 100 chr20:60011802-60012011 1.0000 100 chr7:12463927-12464136 1.0000 100 chr11:37619453-37619662 1.0000 100 chr18:57531466-57531675 1.0000 100 chr7:153128091-153128300 1.0000 100 chr5:29042389-29042598 1.0000 100 chr2:188089824-188090033 1.0000 100 chr13:79855495-79855704 1.0000 100 chr18:56179480-56179689 1.0000 100 chr7:121578596-121578805 1.0000 100 chr12:9064550-9064759 1.0000 100 chr6:163681478-163681687 1.0000 100 chr17:70147263-70147472 1.0000 100 chr16:65806391-65806600 1.0000 100 chr10:16685596-16685805 1.0000 100 chr18:18966922-18967131 1.0000 100 chr11:57092435-57092644 1.0000 100 chr12:131338192-13133840 1.0000 100 chr7:101218498-101218707 1.0000 100 chr2:210384153-210384362 1.0000 100 chr9:75295582-75295791 1.0000 100 chr10:3006476-3006685 1.0000 100 chr11:340642-340851 1.0000 100 chr5:129914137-129914346 1.0000 100 chr19:48948750-48948959 1.0000 100 chr3:155081166-155081375 1.0000 100 chr10:123650829-12365103 1.0000 100 chr7:25772602-25772811 1.0000 100 chr9:25227389-25227598 1.0000 100 chr18:33431309-33431518 1.0000 100 chr10:91318791-91319000 1.0000 100 chr14:87121052-87121261 1.0000 100 chr18:27851758-27851967 1.0000 100 chr8:74711127-74711336 1.0000 100 chr8:70889629-70889838 1.0000 100 chr9:10921756-10921965 1.0000 100 chr2:222890627-222890836 1.0000 100 chr6:79756884-79757093 1.0000 100 chr4:41329872-41330081 1.0000 100 chr12:23738725-23738934 1.0000 100 chr20:48311199-48311408 1.0000 100 chr2:184397337-184397546 1.0000 100 chr9:71487225-71487434 1.0000 100 chr18:25297863-25298072 1.0000 100 chr20:9553470-9553679 1.0000 100 chr8:74989430-74989639 1.0000 100 chr5:165515540-165515749 1.0000 100 chr10:21571028-21571237 1.0000 100 chr4:189321045-189321254 1.0000 100 chr15:71378207-71378416 1.0000 100 chr7:47520639-47520848 1.0000 100 chr2:168131704-168131913 1.0000 100 chr5:87966993-87967202 1.0000 100 chr5:22621352-22621561 1.0000 100 chr21:17125492-17125701 1.0000 100 chr7:128898597-128898806 1.0000 100 chr4:62718861-62719070 1.0000 100 chr21:20492970-20493179 1.0000 100 chr4:62777034-62777243 1.0000 100 chr14:44224169-44224378 1.0000 100 chr3:95646101-95646310 1.0000 100 chr8:125976403-125976612 1.0000 100 chr14:96415002-96415211 1.0000 100 chr1:220512255-220512464 1.0000 100 chr3:121312380-121312589 1.0000 100 chr8:1606341-1606550 1.0000 100 chr8:16141813-16142022 1.0000 100 chr8:111847914-111848123 1.0000 100 chr1:97025542-97025751 1.0000 100 chr2:155446160-155446369 1.0000 100 chr3:71355139-71355348 1.0000 100 chr3:62869787-62869996 1.0000 100 chr2:77750120-77750329 1.0000 100 chr6:147769348-147769557 1.0000 100 chr4:91752112-91752321 1.0000 100 chr8:89604386-89604595 1.0000 100 chr8:18416561-18416770 1.0000 100 chr5:12323784-12323993 1.0000 100 chr7:99541984-99542193 1.0000 100 chr1:158015553-158015762 1.0000 100 chr12:81078028-81078237 1.0000 100 chr16:6367950-6368159 1.0000 100 chr17:66030358-66030567 1.0000 100 chr20:415043-415252 1.0000 100 chr18:48944537-48944746 1.0000 100 chr4:115416938-115417147 1.0000 100 chr22:30476218-30476427 1.0000 100 chr1:208472025-208472234 1.0000 100 chr6:49310159-49310368 1.0000 100 chr1:95126637-95126846 1.0000 100 chr5:171407791-171408000 1.0000 100 chr10:55358748-55358957 1.0000 100 chr10:89385526-89385735 1.0000 100 chr2:144649625-144649834 1.0000 100 chr6:124090210-124090419 1.0000 100 chr13:50573231-50573440 1.0000 100 chr12:24368972-24369181 1.0000 100 chr1:38518876-38519085 1.0000 100 chr5:125393006-125393215 1.0000 100 chr3:181860827-181861036 1.0000 100 chr14:23721778-23721987 1.0000 100 chr13:55449330-55449539 1.0000 100 chr12:99420526-99420735 1.0000 100 chr14:88831188-88831397 1.0000 100 chr5:17401754-17401963 1.0000 100 chr2:203114726-203114935 1.0000 100 chr4:113680666-113680875 1.0000 100 chr12:12837532-12837741 1.0000 100 chr11:128452477-12845268 1.0000 100 chr12:1529129-1529338 1.0000 100 chr9:92310600-92310809 1.0000 100 chr12:86343143-86343352 1.0000 100 chr6:19663815-19664024 1.0000 100 chr19:21882084-21882293 1.0000 100 chr17:32935083-32935292 1.0000 100 chr1:204679521-204679730 1.0000 100 chr9:31412213-31412422 1.0000 100 chr3:113472352-113472561 1.0000 100 chr3:185826996-185827205 1.0000 100 chr7:70165396-70165605 1.0000 100 chr14:99117412-99117621 1.0000 100 chr18:52055848-52056057 1.0000 100 chr2:180415022-180415231 1.0000 100 chr7:7250302-7250511 1.0000 100 chr6:119558518-119558727 1.0000 100 chr5:79039741-79039950 1.0000 100 chr8:130527361-130527570 1.0000 100 chr9:92050190-92050399 1.0000 100 chr13:39199030-39199239 1.0000 100 chr9:34602060-34602269 1.0000 100 chr1:58066260-58066469 1.0000 100 chr18:29405911-29406120 1.0000 100 chr4:159493015-159493224 1.0000 100 chr7:95458464-95458673 1.0000 100 chr2:189320884-189321093 1.0000 100 chr18:52274907-52275116 1.0000 100 chr11:119461617-11946182 1.0000 100 chr6:129065174-129065383 1.0000 100 chr4:114374431-114374640 1.0000 100 chr2:147298128-147298337 1.0000 100 chr5:125345422-125345631 1.0000 100 chr17:38579183-38579392 1.0000 100 chr11:96765054-96765263 1.0000 100 chr7:137890446-137890655 1.0000 100 chr8:94229870-94230079 1.0000 100 chr3:44140216-44140425 1.0000 100 chr6:2989933-2990142 1.0000 100 chr4:14086261-14086470 1.0000 100 chr8:127478375-127478584 1.0000 100 chr4:113570094-113570303 1.0000 100 chr22:23585183-23585392 1.0000 100 chr3:52201257-52201466 1.0000 100 chr10:9953519-9953728 1.0000 100 chr5:119285376-119285585 1.0000 100 chr11:132940055-13294026 1.0000 100 chr13:87534443-87534652 1.0000 100 chr17:68535729-68535938 1.0000 100 chr4:137718160-137718369 1.0000 100 chr9:128517759-128517968 1.0000 100 chr3:115578293-115578502 1.0000 100 chr6:115736613-115736822 1.0000 100 chr6:141474826-141475035 1.0000 100 chr2:74544073-74544282 1.0000 100 chr6:55845579-55845788 1.0000 100 chr4:182087981-182088190 1.0000 100 chr2:111445329-111445538 1.0000 100 chr22:45427783-45427992 1.0000 100 chr6:22878266-22878475 1.0000 100 chrX:16790044-16790253 1.0000 100 chr5:87971700-87971909 1.0000 100 chr17:49124223-49124432 1.0000 100 chr2:19286272-19286481 1.0000 100 chr15:35840410-35840619 1.0000 100 chr19:44124053-44124262 1.0000 100 chr19:39902706-39902915 1.0000 100 chr6:88408316-88408525 1.0000 100 chr12:51611769-51611978 1.0000 100 chr6:123150723-123150932 1.0000 100 chr3:132101404-132101613 1.0000 100 chr13:107511293-10751150 1.0000 100 chr5:177607243-177607452 1.0000 100 chr4:76994116-76994325 1.0000 100 chr15:92661485-92661694 1.0000 100 chr4:5201023-5201232 1.0000 100 chr6:78901892-78902101 1.0000 100 chr16:24330437-24330646 1.0000 100 chr7:89853632-89853841 1.0000 100 chr5:108022457-108022666 1.0000 100 chr1:178252633-178252842 1.0000 100 chr6:138519638-138519847 1.0000 100 chr4:69138701-69138910 1.0000 100 chr5:123996516-123996725 1.0000 100 chr1:73013155-73013364 1.0000 100 chr5:74112826-74113035 1.0000 100 chr15:53037560-53037769 1.0000 100 chr2:157487630-157487839 1.0000 100 chr4:113021192-113021401 1.0000 100 chr7:70938182-70938391 1.0000 100 chr4:141479293-141479502 1.0000 100 chr1:237402700-237402909 1.0000 100 chr11:63299769-63299978 1.0000 100 chr14:67911157-67911366 1.0000 100 chr6:31588245-31588454 1.0000 100 chr5:88999679-88999888 1.0000 100 chr1:202662204-202662413 1.0000 100 chr10:22242532-22242741 1.0000 100 chr8:41981382-41981591 1.0000 100 chr2:177610764-177610973 1.0000 100 chr4:110224022-110224231 1.0000 100 chr2:55361286-55361495 1.0000 100 chr2:157487379-157487588 1.0000 100 chr19:4769635-4769844 1.0000 100 chr7:145812757-145812966 1.0000 100 chr3:155080783-155080992 1.0000 100 chr18:9643543-9643752 1.0000 100 chr14:73592495-73592704 1.0000 100 chr2:62582322-62582531 1.0000 100 chr2:55361007-55361216 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme memechip_out/seqs-centered -oc memechip_out/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile memechip_out/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 257 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 25652 N= 257 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.284 C 0.216 G 0.216 T 0.284 Background letter frequencies (from memechip_out/background): A 0.282 C 0.218 G 0.218 T 0.282 ******************************************************************************** ******************************************************************************** MOTIF CYTTTRWTATGCAAA MEME-1 width = 15 sites = 197 llr = 1985 E-value = 1.0e-308 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYTTTRWTATGCAAA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 21312331a:::879 pos.-specific C 541::2:1:::8::: probability G 21::15::::8::21 matrix T 25697178:a2221: bits 2.2 2.0 1.8 ** 1.5 *** * Relative 1.3 **** * Entropy 1.1 * ***** * (14.5 bits) 0.9 * ******* * 0.7 *** ********* 0.4 **** ********* 0.2 *************** 0.0 --------------- Multilevel CTTTTGTTATGCAAA consensus CA AA T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTTTRWTATGCAAA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr12:99420526-99420735 - 31 3.59e-09 ATGGCGAGTC CTTTTGTTATGCAAA TTCATCCCTC chr15:35840410-35840619 - 11 5.16e-09 CGGCTGGCGA CCTTTGATATGCAAA TGCAGGCCAT chr18:29405911-29406120 - 46 5.16e-09 GGGCTGCCAA CCTTTGATATGCAAA TACAGTCCAT chr4:115416938-115417147 - 40 5.16e-09 AGTCAGGCAA CCTTTGATATGCAAA TACAGGCCAT chr6:147769348-147769557 + 14 5.16e-09 aggctggcaa cctttgatatgcaaa tgcaggccat chr3:95646101-95646310 - 81 5.16e-09 GGCAA CCTTTGATATGCAAA TGCCAGCAGT chr7:25772602-25772811 - 78 5.16e-09 GCTGGCAA CCTTTGATATGCAAA TGCAAACCGT chr10:9953519-9953728 - 39 1.82e-08 CCACCCTAAT CTTTTATTATGCAAA TAGACTCTCT chr3:52201257-52201466 - 26 1.82e-08 CCACCTTAAT CTTTTATTATGCAAA TGGGCCTTTA chr4:159493015-159493224 - 53 1.82e-08 CCACCCTAAT CTTTTATTATGCAAA TGTGGCTTCT chr19:21882084-21882293 - 68 1.82e-08 CCACCCTAGT CTTTTATTATGCAAA TGTAGCTTCT chr5:125393006-125393215 + 4 1.82e-08 agt cttttattatgcaaa tgtggcctcc chr12:23738725-23738934 - 56 1.82e-08 GCCCGTGAAT CTTTTATTATGCAAA TGGGGTTTAC chr4:41329872-41330081 + 50 1.82e-08 ccagcctaat cttttattatgcaaa cgggttctct chr7:101218498-101218707 - 29 2.54e-08 CCACCCTAAT CTTTTGTTATGCAGA TGGGGTCTCT chr12:119419088-11941929 + 38 2.54e-08 GACCTGCGGG CTTTTGTTATGCAGA TGGCGGCAGG chr13:50573231-50573440 - 64 3.00e-08 CCACCCTAAT TTTTTGTTATGCAAA TGTAGCTTCT chr3:62869787-62869996 - 65 3.00e-08 TGGAGGAATC TTTTTGTTATGCAAA TACAAGCTAG chr7:83907090-83907299 + 50 3.00e-08 tttggcttcc tttttgttatgcaaa ttgctctagc chr12:24368972-24369181 + 23 3.67e-08 gatagatgtg cctttgttatgctaa tgaggtggca chr2:111446477-111446686 - 54 3.67e-08 CATAGGAGTG CCTTTGTTATGCTAA TGAGGTGACC chr7:153128091-153128300 + 39 4.75e-08 aggctggcca cctttaatatgcaaa tgtaagccat chr6:21186269-21186478 + 71 4.75e-08 GTGGCAGTGC CTTTTGTTATGCTAA TTAGACACCA chr8:40177527-40177736 + 56 4.75e-08 TGTGATACAG CTTTTGTTATGCTAA TGGACCTCAT chr2:203114726-203114935 + 15 5.44e-08 ccagcatagc cttttaatatgcaaa tgcagggcac chr6:138519638-138519847 + 53 6.76e-08 AGGGTAGAAA CCTTTCATATGCAAA TTAGGAAACG chr11:340642-340851 - 22 6.76e-08 GAGGGTTATC TCTTTGATATGCAAA TTTTGGGAAG chr6:166778828-166779037 + 29 8.69e-08 TCTTCCTTTT CCATTGTTATGCAGA TGCCGTTTTA chr13:39199030-39199239 - 31 1.36e-07 CCACCCTAAT CTTTTATTATGCAGA TGGGTTTTCT chr5:171407791-171408000 + 61 1.36e-07 agaggagcat cttttgttattcaaa ataagccact chr12:81078028-81078237 + 43 1.36e-07 atactctaat cttttattatgcaga tgagttttct chr7:99541984-99542193 + 30 1.36e-07 tcaccttaac cttttattatgcaga tggggtctct chr6:88408316-88408525 - 23 1.83e-07 AGGCTTAGAG CCTTTATTATGCTAA TTGGCATTAT chrX:16790044-16790253 + 63 2.65e-07 ATGCAGTGCA CCATGGTTATGCAAA TGAAGCTGAG chr2:111445329-111445538 + 67 2.65e-07 aggccggcaa gtattgatatgcaaa tggaagcgat chr10:91318791-91319000 - 84 2.65e-07 AA GTATTGATATGCAAA TGCAGATGGT chr20:60011802-60012011 - 49 2.65e-07 GATTGGAGTG TCTTTGTTATGCTAA TGAAGTGACT chr6:76830109-76830318 + 56 2.65e-07 TTGGATGGCT TCTTAGTTATGCAAA TAAATGGCAA chr1:53441977-53442186 - 42 2.65e-07 GATAGAAGTG TCTTTGTTATGCTAA TGAGGTCACT chr5:165515540-165515749 - 16 3.15e-07 TCACTGAGCC TTTTAGTTATGCAAA TGTAAAGCAA chr17:70147263-70147472 + 19 3.15e-07 AGGGTTCAGC CTATTGTCATGCAAA TTAATTCAGA chr15:92661485-92661694 - 62 3.69e-07 AACAAAAAGA ACTTAGTTATGCAAA TGGACTGAGC chr6:55845579-55845788 - 61 3.69e-07 AACCAAGAGT CTATTGTTATGTAAA TTTTATCTTT chr4:106476532-106476741 + 35 3.69e-07 TGTACGATAC CCATTATTATGCAGA TGAGTCCTAA chr8:72628500-72628709 + 62 4.43e-07 gcccgcgaat cttttattatgtaaa tggagtttcc chr7:150433139-150433348 + 55 4.43e-07 ggaagccatc cctttgaaatgcaaa catcaaggaa chr2:77750120-77750329 + 12 5.22e-07 GAATGCAAAT CATTTCTTATGCAAA TCACTTATTG chr7:37288032-37288241 + 36 5.22e-07 GCCTCTTTGG CCTTTGTGATGCAAA TTTCTGGGAG chr12:131338192-13133840 - 55 6.10e-07 GCAATAGCGG CTTTTGTTATTCAGA ACAGGCCCTT chr9:128517759-128517968 + 30 8.28e-07 GTATTAATTC ACTTTGATATGCTAA TTAGAGGGCA chr2:189320884-189321093 - 10 8.28e-07 TTGGTGATTA ACATTCTTATGCAAA TTACTTATG chr12:1529129-1529338 - 56 8.28e-07 ACAGTGTCAT GCTTTATTATGCTAA TAAAGCAACC chr13:79855495-79855704 + 48 8.28e-07 TAAAACATCA CTTTTGTTATGTTAA TTTCCCAGCG chr7:95458464-95458673 + 65 1.11e-06 GCCTGTGACC CTTTGCATATGCAAA AATTCTTAGC chr14:99117412-99117621 - 84 1.28e-06 TT CCATTATTATTCAAA ACCTTGCTTG chr1:220512255-220512464 + 57 1.28e-06 tgtttatcaa ggtttgttatgcaga tttcaggtgg chr16:65806391-65806600 - 67 1.28e-06 ACAAAGGTAA GGTTTGTTATGCAGA TTTAAGTAAG chr1:17796686-17796739 + 32 1.28e-06 agcaaacaag ggtttgttatgcaga ttgcaact chr10:22242532-22242741 + 67 1.50e-06 TGTACCTACG CTTTTGTTATTCATA ATGAGTTCTT chr14:67911157-67911366 + 67 1.50e-06 ataggaatgt cttttgttattcata ataaggccct chr4:69138701-69138910 - 66 1.50e-06 ATAGAAGTTT CTTTTGTTATTCATA ATGAGCTCCT chr8:127478375-127478584 + 57 1.50e-06 ataggagtgt cttttgttattcata atgagctcct chr11:119461617-11946182 - 52 1.50e-06 ACAGGAATGT CTTTTGTTATTCATA ATGAGCCCTT chr3:113472352-113472561 + 5 1.50e-06 aggg gtattgttatgtaaa ttatggccga chr9:31412213-31412422 + 33 1.50e-06 AGAATCCTTT CTTTGGTTATtcaaa atgcagattc chr20:415043-415252 - 34 1.50e-06 TGGTGAGTGT CTTTTGTTATTCATA ACCCCTTTCC chr1:97025542-97025751 + 13 1.50e-06 gtaagagagt cttttgttattcata aggagtctct chr4:62718861-62719070 - 67 1.50e-06 ATAGGAATGT CTTTTGTTATTCATA AGGAGCCCCT chr8:74989430-74989639 - 57 1.50e-06 ACAGGAGTGT CTTTTGTTATTCATA AAGCGCCTGT chr3:73812116-73812325 - 72 1.50e-06 ATTGGAATGT CTTTTGTTATTCATA ACCAGGCCCT chr15:52684554-52684763 - 72 1.50e-06 TAGGAGAAGT ACTTTGTTATGCTGA AAGCATTGCC chr18:9643543-9643752 - 34 1.71e-06 ACAATTAGAT TATTTATTATGCAAA TCTACCTAAA chr1:237402700-237402909 + 52 1.71e-06 tcaccctaat cttttattatgtaga tgggttttct chr4:14086261-14086470 + 64 1.71e-06 tgcaaaggtg gctttgttatgtaga tgaagcctcc chr6:19663815-19664024 + 31 1.71e-06 TAATTTAACG CTTTTGTTATTTAAA ATGTGATGTA chr8:74711127-74711336 - 79 1.71e-06 CATACCT GCTTTGAAATGCAAA TTTATTCATT chr6:78901892-78902101 + 79 1.95e-06 tttgccttct atttacttatgcaaa tttatgc chr18:27851758-27851967 + 30 1.95e-06 tccactttct ccatgaatatgcaaa tggtctttcc chr16:19893521-19893730 + 22 1.95e-06 GCTCTGTGAT CCATGAATATGCAAA GCAGCTCCAG chr9:10921756-10921965 - 47 2.22e-06 GGCTTTCTTT CTTTTGTAATGCATA TCTAAGTATG chr2:210384153-210384362 - 21 2.22e-06 TGAGGCTATC TTTTTGAAATGCAAA CATCAAGGGA chr1:95126637-95126846 - 76 2.53e-06 CAGTGGTTTT CTACTGTTATGCAAA TCCCCTCCTC chr3:155081166-155081375 + 52 2.53e-06 caaatgtaat cgtttatcatgcaaa ttacccttca chr11:37619453-37619662 + 41 2.53e-06 aaataaagtg tctttcatatgctaa tgaattgggt chr2:81101600-81101809 + 42 2.53e-06 AAGCTTTCTC TTATTCTTATGCAGA TAGGAAGTGA chr12:130255929-13025613 - 15 2.53e-06 CCATTGCTGT GTTTTGTCATGCTAA TGATAGTAGC chr13:94796311-94796520 - 35 2.53e-06 TCAGTCTTTT TCTTACATATGCAAA TAGGACAACA chr12:86343143-86343352 - 63 2.91e-06 AATGGATACT TCCTTCTTATGCAAA AATCCTAAGC chr18:33431309-33431518 + 19 2.91e-06 AAACTTATTG ATTTAAATATGCAAA AAAGCCTGGG chr3:181860827-181861036 - 37 3.29e-06 CATGCCTCTG CTATTTATATGCAGA ACCCGCTGAA chr8:111847914-111848123 - 54 3.73e-06 CAAGCCATCG GCTTTCATATGTAAA TGCCAGCAGC chr8:1606341-1606550 - 76 3.73e-06 CAGACTAGGA GCTTTCATATGTAAA TGGAGCAGCT chr11:132940055-13294026 - 31 4.21e-06 GCTGCAGAGC TAATTATTATGCAAA TTTATGCTAA chr8:94229870-94230079 - 67 4.21e-06 TGTCCCTGGC CCATTTATATGCTAA TTGCTGAAGT chr18:57531466-57531675 - 49 4.21e-06 GGGCCTTGGT GCATTGTTATGTAGA TGAGCTTTTG chr7:12463927-12464136 - 84 4.21e-06 AA GCATTGATATGCAAG CCACAGGCTT chr3:29517400-29517609 + 56 4.21e-06 CTAGGTGTGT TCTTTGTCATGTAAA ACATCCCCCA chr16:25867224-25867433 + 36 4.75e-06 ggagagtagc cctttgttatggaga atgctctggg chr2:62582322-62582531 + 35 5.38e-06 gactggaatt ttattattattcaaa tcagtctccc chr6:123150723-123150932 - 58 5.38e-06 AAAGGACCAT TTTTTGTTATTCATA GCAAGCCCCT chr18:52274907-52275116 - 80 5.38e-06 AAGGCT CTATAATCATGCAAA CATTTCCTGG chr6:124090210-124090419 + 8 5.38e-06 TTACATT CTATTGTTATGCATG AATCTTTTTA chr21:20492970-20493179 + 19 5.38e-06 taaacttttc ctattatcatgctaa aatctccacc chr4:189321045-189321254 - 47 5.38e-06 CTATGTTTAC TTTATCTTATGCAAA AATGCAGACG chr9:71487225-71487434 + 56 5.38e-06 CATTGGAACA GCTTAAATATGCAGA GGTAAACAAA chr2:184397337-184397546 - 55 5.38e-06 CCACTGGGGT GCTATGTTATGCTAA ATGAAGTCTT chr17:32077950-32078159 + 70 5.38e-06 TTGAGTTTGT GTTTTGATATGTTAA TCAGCTTGGA chr12:57636546-57636643 + 52 5.38e-06 GTATTTGCAT ATTTGCATATGCAAA TAATAACATT chr8:41981382-41981591 - 23 6.03e-06 GACAGGAATG CGCTTGTTATGCTAA TGAGGTGACT chr2:144649625-144649834 + 78 6.03e-06 ATTGATGTGG ACTTAATTATGCTAA TTTAGACA chr2:168131704-168131913 + 83 6.03e-06 CCTATTTAAG CTTTAGAGATGCAAA AAT chr1:38518876-38519085 - 57 6.80e-06 GGCAGCTAGC TCATGAATATGCAAA TCAACCTTGA chr22:30476218-30476427 - 22 6.80e-06 TCGCTAGACT TCATGAATATGCAAA GCAGGGGCGA chr10:121446855-12144706 - 51 7.59e-06 GGCTTTAGGC CTATTGTGATGCTAA TGGATCTCCT chr5:12323784-12323993 + 1 8.48e-06 . gcttttatatgtaaa tgacagcagc chr2:147298128-147298337 - 52 1.30e-05 CTGCTTCTTC CTCTGTTTATGCAAA AGCTCTCATT chr14:88831188-88831397 + 32 1.30e-05 gaaaccaagg tttttgtcatgtaga tgaagcctcc chr8:16141813-16142022 + 67 1.30e-05 ctgaccccct cctttcaaatgtaaa atgtcgattc chr7:128898597-128898806 + 47 1.30e-05 ACCGTGGCAA CCATTATAATGTAAA TGAGCCTTCT chr12:39845850-39846059 + 76 1.30e-05 CCAGTTAATT GCATTCAAATGCAAA TTACAGCTAT chr13:107511293-10751150 - 14 1.44e-05 TTTCTTTAGT GGTTATTTATGCAAA TGCACAGATT chr17:38579183-38579392 + 61 1.44e-05 TTTGAGGTAT ATTTGCATATGCAGA TAAGTTCCTT chr4:113680666-113680875 - 53 1.44e-05 AAATGGCTTG CTTTTCACATGCTGA TTTACTCACC chr8:125976403-125976612 + 25 1.44e-05 ggtaggagca cctttgttattcatg gtgggcccct chr21:17125492-17125701 - 19 1.44e-05 TGAACTTTCC TCATTATCATGCTAA AGTCAGCACC chr1:1711535-1711744 - 58 1.44e-05 CTCAGCTCAC GCATTATTATGTTAA TGATCTTATC chr2:214991982-214992191 + 30 1.44e-05 AGTGATGTTC AGTTTCTTATGTAAA TTTATGCAAA chr13:35474513-35474722 - 34 1.44e-05 GCAATGGGTT TCTTTGTTATGGAGA TAGATACCTT chr7:89853632-89853841 - 26 1.60e-05 TAAACCTACT TGATTTATATGCAAA TTAAGGGGTG chr3:115578293-115578502 - 36 1.60e-05 CCCCTGTTGT GTCTTATTATTCAAA TAGGGAACAT chr8:130527361-130527570 - 55 1.60e-05 AGCAAAGGGG GTCTTGTTATGTAGA TGAACCCTAT chr17:32935083-32935292 - 51 1.60e-05 AGAACAGCAC CTTTTGTTATTCATG ATAAGCCCTT chr10:3006476-3006685 - 78 1.60e-05 AGCCAAGG TTCTTGTCATGCAGA TGAAGACTCC chr12:9064550-9064759 + 62 1.60e-05 CTAATGGCCT TCAGTGTTATGCAGA GTAAAGACAT chr11:100849318-10084942 + 20 1.60e-05 AACAACAGTT CTTTTGTCATGTTGA TTTGATTCTT chr18:18966922-18967131 + 69 1.77e-05 TTTGGTTGCT AATTTCTTATGTAAA TTATCGGAGT chr2:155446160-155446369 - 52 1.96e-05 GGATTCTCAA ACTTGAATATGCATA TAACTCACCT chr6:163681478-163681687 + 80 1.96e-05 TTCAAATGTA AATGTGTTATGCAAA TGTCTT chr3:121312380-121312589 + 30 2.16e-05 TTGTTAAGCA AATTAGTTATGTAAA GATGTGGGGG chr13:79232439-79232648 - 43 2.16e-05 GAATACTCTC TCTTTGTGATGCAAG AGGTGCCTAG chr5:74112826-74113035 - 31 2.62e-05 CAGTGGTTCA CCATTATCATGTTAA TTGTGGTTTT chr5:108022457-108022666 + 35 2.62e-05 TAAAGCATGT GCATTCACATGCTAA TTCCAGAAAG chr6:115736613-115736822 + 68 2.87e-05 gaatccaagg ctcttgtcatgtaga tgaagcctac chr2:177610764-177610973 + 6 3.16e-05 AACTT GCTAATTTATGCAAA TGATCCTTAA chr1:58066260-58066469 - 43 3.16e-05 CATTACATGA CAATGCTTATGCTAA TTCAATTCTA chr5:87966993-87967202 + 24 3.16e-05 GCACCCACGG GGTTAAATATGCTAA TTTGCATTCA chr1:183372764-183372973 + 64 3.46e-05 TTTATTCACT ACATTTAAATGCAAA TGATAACAAA chr14:23721778-23721987 + 86 3.78e-05 tgaagaaatt gcattctcatgctga chr20:48311199-48311408 + 53 4.13e-05 tgaactctgc ctttgcatatgcaca atttcatcca chr6:22878266-22878475 - 2 4.50e-05 TCAGTGGCTC ACATAAATATGCAAG A chr18:56179480-56179689 + 30 4.50e-05 CAATGTGACT CCATTGATATTCATG AATTCAAAAA chr1:202536887-202537096 + 79 4.50e-05 ACTCTCTCCC ACTTTGTTATTCATG CCAATGG chr18:25297863-25298072 + 52 4.92e-05 aggtcccatg TCATTGTCATGGAAA GAGCTTTGAC chr5:129914137-129914346 + 17 4.92e-05 TGCCCACAGT TAATTGTCATTCAAA ATACTCCTGC chr12:51611769-51611978 + 12 5.82e-05 GCGTCATGAG CATAATTTATGCAAA GAGCTTTGCC chr9:92050190-92050399 + 46 5.82e-05 TTCACAGCCC CCATTCCTATGTAAA TTCTAGTCCG chr9:92310600-92310809 + 62 5.82e-05 GAGGTGATAT GCAAATTTATGCAAA TGAGAAGCAA chr10:89385526-89385735 - 15 5.82e-05 AACAATTGTA AGTTTCTTATGTATA CAGCAGACAC chr4:113570094-113570303 - 70 6.85e-05 TATTTACATA CATTTAACATGTAGA TGCTTCTTCA chr1:202662204-202662413 - 59 7.43e-05 CCCCAACAGT ATTTAGAAATGCAAG CCATGGCTTC chr4:5201023-5201232 - 17 7.43e-05 TCACATAGCA ACAAAGATATGCTAA TGACAAGCAC chr11:128452477-12845268 - 37 7.43e-05 AATTGTGGCT CTTTTCTCCTGCAAA ATTCTTGACT chr3:155080783-155080992 + 20 8.05e-05 ttggattccc tgtgggatatgcaaa aagggcaatc chr1:73013155-73013364 - 28 8.05e-05 GCATTTAAGT GTTCAATTATGCTAA TGCTGTTCCC chr4:137718160-137718369 - 55 8.05e-05 GGAAGGGGAA AGTTAAAAATGCAAA TTACAACTTT chr9:75295582-75295791 - 63 8.05e-05 CTTTTGTTCA CATTAGAGATGCTAA TTATTGCTCA chr18:52055848-52056057 + 80 9.40e-05 tctatgatct ctattttaatgttaa tgctgg chr14:44224169-44224378 + 26 9.40e-05 GAGAATGCCT GCCTTTTTATTCTAA TGCGTAACTT chr9:34602060-34602269 - 19 1.01e-04 ACAGAAACCT GTTGAATTATTCAAA TAGAAAGGAT chr3:185826996-185827205 - 69 1.01e-04 GCCCCCGGTG CATAAATTATGTAAA ACAGACCCCT chr4:76994116-76994325 - 30 1.18e-04 AAAATAAGTA CGTAAATTATGCAAG TATGTTAGAA chr4:113021192-113021401 - 40 1.27e-04 AGGACCACCC TCATGAATATTCATA GCTCCTCCTA chr2:74544073-74544282 + 42 1.27e-04 aggaccacct tcatgaatattcata gatcctcctg chr10:55358748-55358957 + 6 1.27e-04 gcaga ttattcataggcaaa ttctttgcta chr14:96415002-96415211 + 58 1.27e-04 ttgcaatctt ctttacaaatgcagg aatttgccgc chr17:68535729-68535938 + 33 1.36e-04 CATAATTTAT GTAGATATATGCAAA AGCTCTGCCA chr2:19286272-19286481 + 16 1.46e-04 CCACATGGGG CTAATTTTATTCATA GGGGCTCTGT chr3:71355139-71355348 + 33 1.46e-04 CCTTACTCTA GATTAAATATGCAGG AAGAGGCCCC chr4:124874120-124874329 - 24 1.46e-04 TATTGTGTAT GCACATATATGCAAA TTTCAGGTGG chr10:16685596-16685805 - 43 1.57e-04 CCATGTTCCA AGTCTGTTATGTAGA TTTGGAAACT chr4:62777034-62777243 + 63 1.68e-04 TATAATGTGG TTTGTCATATGTTAA TTTGCATGAT chr2:55361007-55361216 + 53 1.80e-04 tggtgatttc ttaatcacatgctaa acaaagagtg chr5:125345422-125345631 + 64 1.80e-04 gggtctcggc acattgtcatacaaa caaagtcaac chr1:15710969-15711159 - 39 1.80e-04 AATGCATGTG GACTGATTATGTAAA TCTGCAGGTT chr14:73592495-73592704 - 39 2.06e-04 AACAGTTTGC CTTAATTTATGCACA GTGTCGCTGC chr5:88999679-88999888 - 73 2.35e-04 GGAATGTTTG ACATTGTGATGCTGG AGCTAAAGTG chr7:70165396-70165605 - 38 2.35e-04 CTGATTCCGT CTCTTGTCATTCATG TTACCAACAG chr5:22621352-22621561 + 39 2.51e-04 ggtaggaggc attaggatatgcaca tattttgggt chr22:45427783-45427992 + 51 2.67e-04 GTCTAATAGA ATTCAGATATTCTAA TGGCTCAGGT chr4:141479293-141479502 + 17 2.84e-04 taactgtaat acatttaaatgttaa gcctccaccc chr13:74341366-74341575 - 19 3.63e-04 TCATGAATAA TGCATGACATGCAGA TTAGGTGGTG chr17:49124223-49124432 - 50 4.07e-04 TAGGAGTGTG AATAAATTATGTAGA TCTTCAGGCA chr7:121578596-121578805 - 75 4.07e-04 CTTTCTCCTT GTTTTGCAATGTATA TCAATCCTTT chr13:55449330-55449539 - 3 4.31e-04 CGCATTTGGA TCATGTTAATGCTTA GA chr5:17401754-17401963 - 2 4.83e-04 GTTGTTTACC AATAAATTATGTTAA A chr2:188089824-188090033 - 17 5.98e-04 TGCGCATACT ATCTAGTTATTGAGA GCGGCCCCCT chr10:123650829-12365103 - 84 7.35e-04 TT ATATGTAAATGCAGG CAGCTGTACC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTTTRWTATGCAAA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:99420526-99420735 3.6e-09 30_[-1]_55 chr15:35840410-35840619 5.2e-09 10_[-1]_75 chr18:29405911-29406120 5.2e-09 45_[-1]_40 chr4:115416938-115417147 5.2e-09 39_[-1]_46 chr6:147769348-147769557 5.2e-09 13_[+1]_72 chr3:95646101-95646310 5.2e-09 80_[-1]_5 chr7:25772602-25772811 5.2e-09 77_[-1]_8 chr10:9953519-9953728 1.8e-08 38_[-1]_47 chr3:52201257-52201466 1.8e-08 25_[-1]_60 chr4:159493015-159493224 1.8e-08 52_[-1]_33 chr19:21882084-21882293 1.8e-08 67_[-1]_18 chr5:125393006-125393215 1.8e-08 3_[+1]_82 chr12:23738725-23738934 1.8e-08 55_[-1]_30 chr4:41329872-41330081 1.8e-08 49_[+1]_36 chr7:101218498-101218707 2.5e-08 28_[-1]_57 chr12:119419088-11941929 2.5e-08 37_[+1]_48 chr13:50573231-50573440 3e-08 63_[-1]_22 chr3:62869787-62869996 3e-08 64_[-1]_21 chr7:83907090-83907299 3e-08 49_[+1]_36 chr12:24368972-24369181 3.7e-08 22_[+1]_63 chr2:111446477-111446686 3.7e-08 53_[-1]_32 chr7:153128091-153128300 4.7e-08 38_[+1]_47 chr6:21186269-21186478 4.7e-08 70_[+1]_15 chr8:40177527-40177736 4.7e-08 55_[+1]_30 chr2:203114726-203114935 5.4e-08 14_[+1]_71 chr6:138519638-138519847 6.8e-08 52_[+1]_33 chr11:340642-340851 6.8e-08 21_[-1]_64 chr6:166778828-166779037 8.7e-08 28_[+1]_57 chr13:39199030-39199239 1.4e-07 30_[-1]_55 chr5:171407791-171408000 1.4e-07 60_[+1]_25 chr12:81078028-81078237 1.4e-07 42_[+1]_43 chr7:99541984-99542193 1.4e-07 29_[+1]_56 chr6:88408316-88408525 1.8e-07 22_[-1]_63 chrX:16790044-16790253 2.6e-07 62_[+1]_23 chr2:111445329-111445538 2.6e-07 66_[+1]_19 chr10:91318791-91319000 2.6e-07 83_[-1]_2 chr20:60011802-60012011 2.6e-07 48_[-1]_37 chr6:76830109-76830318 2.6e-07 55_[+1]_30 chr1:53441977-53442186 2.6e-07 41_[-1]_44 chr5:165515540-165515749 3.2e-07 15_[-1]_70 chr17:70147263-70147472 3.2e-07 18_[+1]_67 chr15:92661485-92661694 3.7e-07 61_[-1]_24 chr6:55845579-55845788 3.7e-07 60_[-1]_25 chr4:106476532-106476741 3.7e-07 34_[+1]_51 chr8:72628500-72628709 4.4e-07 61_[+1]_24 chr7:150433139-150433348 4.4e-07 54_[+1]_31 chr2:77750120-77750329 5.2e-07 11_[+1]_74 chr7:37288032-37288241 5.2e-07 35_[+1]_50 chr12:131338192-13133840 6.1e-07 54_[-1]_31 chr9:128517759-128517968 8.3e-07 29_[+1]_56 chr2:189320884-189321093 8.3e-07 9_[-1]_76 chr12:1529129-1529338 8.3e-07 55_[-1]_30 chr13:79855495-79855704 8.3e-07 47_[+1]_38 chr7:95458464-95458673 1.1e-06 64_[+1]_21 chr14:99117412-99117621 1.3e-06 83_[-1]_2 chr1:220512255-220512464 1.3e-06 56_[+1]_29 chr16:65806391-65806600 1.3e-06 66_[-1]_19 chr1:17796686-17796739 1.3e-06 31_[+1]_8 chr10:22242532-22242741 1.5e-06 66_[+1]_19 chr14:67911157-67911366 1.5e-06 66_[+1]_19 chr4:69138701-69138910 1.5e-06 65_[-1]_20 chr8:127478375-127478584 1.5e-06 56_[+1]_29 chr11:119461617-11946182 1.5e-06 51_[-1]_34 chr3:113472352-113472561 1.5e-06 4_[+1]_81 chr9:31412213-31412422 1.5e-06 32_[+1]_53 chr20:415043-415252 1.5e-06 33_[-1]_52 chr1:97025542-97025751 1.5e-06 12_[+1]_73 chr4:62718861-62719070 1.5e-06 66_[-1]_19 chr8:74989430-74989639 1.5e-06 56_[-1]_29 chr3:73812116-73812325 1.5e-06 71_[-1]_14 chr15:52684554-52684763 1.5e-06 71_[-1]_14 chr18:9643543-9643752 1.7e-06 33_[-1]_52 chr1:237402700-237402909 1.7e-06 51_[+1]_34 chr4:14086261-14086470 1.7e-06 63_[+1]_22 chr6:19663815-19664024 1.7e-06 30_[+1]_55 chr8:74711127-74711336 1.7e-06 78_[-1]_7 chr6:78901892-78902101 2e-06 78_[+1]_7 chr18:27851758-27851967 2e-06 29_[+1]_56 chr16:19893521-19893730 2e-06 21_[+1]_64 chr9:10921756-10921965 2.2e-06 46_[-1]_39 chr2:210384153-210384362 2.2e-06 20_[-1]_65 chr1:95126637-95126846 2.5e-06 75_[-1]_10 chr3:155081166-155081375 2.5e-06 51_[+1]_34 chr11:37619453-37619662 2.5e-06 40_[+1]_45 chr2:81101600-81101809 2.5e-06 41_[+1]_44 chr12:130255929-13025613 2.5e-06 14_[-1]_71 chr13:94796311-94796520 2.5e-06 34_[-1]_51 chr12:86343143-86343352 2.9e-06 62_[-1]_23 chr18:33431309-33431518 2.9e-06 18_[+1]_67 chr3:181860827-181861036 3.3e-06 36_[-1]_49 chr8:111847914-111848123 3.7e-06 53_[-1]_32 chr8:1606341-1606550 3.7e-06 75_[-1]_10 chr11:132940055-13294026 4.2e-06 30_[-1]_55 chr8:94229870-94230079 4.2e-06 66_[-1]_19 chr18:57531466-57531675 4.2e-06 48_[-1]_37 chr7:12463927-12464136 4.2e-06 83_[-1]_2 chr3:29517400-29517609 4.2e-06 55_[+1]_30 chr16:25867224-25867433 4.8e-06 35_[+1]_50 chr2:62582322-62582531 5.4e-06 34_[+1]_51 chr6:123150723-123150932 5.4e-06 57_[-1]_28 chr18:52274907-52275116 5.4e-06 79_[-1]_6 chr6:124090210-124090419 5.4e-06 7_[+1]_78 chr21:20492970-20493179 5.4e-06 18_[+1]_67 chr4:189321045-189321254 5.4e-06 46_[-1]_39 chr9:71487225-71487434 5.4e-06 55_[+1]_30 chr2:184397337-184397546 5.4e-06 54_[-1]_31 chr17:32077950-32078159 5.4e-06 69_[+1]_16 chr12:57636546-57636643 5.4e-06 51_[+1]_32 chr8:41981382-41981591 6e-06 22_[-1]_63 chr2:144649625-144649834 6e-06 77_[+1]_8 chr2:168131704-168131913 6e-06 82_[+1]_3 chr1:38518876-38519085 6.8e-06 56_[-1]_29 chr22:30476218-30476427 6.8e-06 21_[-1]_64 chr10:121446855-12144706 7.6e-06 50_[-1]_35 chr5:12323784-12323993 8.5e-06 [+1]_85 chr2:147298128-147298337 1.3e-05 51_[-1]_34 chr14:88831188-88831397 1.3e-05 31_[+1]_54 chr8:16141813-16142022 1.3e-05 66_[+1]_19 chr7:128898597-128898806 1.3e-05 46_[+1]_39 chr12:39845850-39846059 1.3e-05 75_[+1]_10 chr13:107511293-10751150 1.4e-05 13_[-1]_72 chr17:38579183-38579392 1.4e-05 60_[+1]_25 chr4:113680666-113680875 1.4e-05 52_[-1]_33 chr8:125976403-125976612 1.4e-05 24_[+1]_61 chr21:17125492-17125701 1.4e-05 18_[-1]_67 chr1:1711535-1711744 1.4e-05 57_[-1]_28 chr2:214991982-214992191 1.4e-05 29_[+1]_56 chr13:35474513-35474722 1.4e-05 33_[-1]_52 chr7:89853632-89853841 1.6e-05 25_[-1]_60 chr3:115578293-115578502 1.6e-05 35_[-1]_50 chr8:130527361-130527570 1.6e-05 54_[-1]_31 chr17:32935083-32935292 1.6e-05 50_[-1]_35 chr10:3006476-3006685 1.6e-05 77_[-1]_8 chr12:9064550-9064759 1.6e-05 61_[+1]_24 chr11:100849318-10084942 1.6e-05 19_[+1]_66 chr18:18966922-18967131 1.8e-05 68_[+1]_17 chr2:155446160-155446369 2e-05 51_[-1]_34 chr6:163681478-163681687 2e-05 79_[+1]_6 chr3:121312380-121312589 2.2e-05 29_[+1]_56 chr13:79232439-79232648 2.2e-05 42_[-1]_43 chr5:74112826-74113035 2.6e-05 30_[-1]_55 chr5:108022457-108022666 2.6e-05 34_[+1]_51 chr6:115736613-115736822 2.9e-05 67_[+1]_18 chr2:177610764-177610973 3.2e-05 5_[+1]_80 chr1:58066260-58066469 3.2e-05 42_[-1]_43 chr5:87966993-87967202 3.2e-05 23_[+1]_62 chr1:183372764-183372973 3.5e-05 63_[+1]_22 chr14:23721778-23721987 3.8e-05 85_[+1] chr20:48311199-48311408 4.1e-05 52_[+1]_33 chr6:22878266-22878475 4.5e-05 1_[-1]_84 chr18:56179480-56179689 4.5e-05 29_[+1]_56 chr1:202536887-202537096 4.5e-05 78_[+1]_7 chr18:25297863-25298072 4.9e-05 51_[+1]_34 chr5:129914137-129914346 4.9e-05 16_[+1]_69 chr12:51611769-51611978 5.8e-05 11_[+1]_74 chr9:92050190-92050399 5.8e-05 45_[+1]_40 chr9:92310600-92310809 5.8e-05 61_[+1]_24 chr10:89385526-89385735 5.8e-05 14_[-1]_71 chr4:113570094-113570303 6.8e-05 69_[-1]_16 chr1:202662204-202662413 7.4e-05 58_[-1]_27 chr4:5201023-5201232 7.4e-05 16_[-1]_69 chr11:128452477-12845268 7.4e-05 36_[-1]_49 chr3:155080783-155080992 8e-05 19_[+1]_66 chr1:73013155-73013364 8e-05 27_[-1]_58 chr4:137718160-137718369 8e-05 54_[-1]_31 chr9:75295582-75295791 8e-05 62_[-1]_23 chr18:52055848-52056057 9.4e-05 79_[+1]_6 chr14:44224169-44224378 9.4e-05 25_[+1]_60 chr9:34602060-34602269 0.0001 18_[-1]_67 chr3:185826996-185827205 0.0001 68_[-1]_17 chr4:76994116-76994325 0.00012 29_[-1]_56 chr4:113021192-113021401 0.00013 39_[-1]_46 chr2:74544073-74544282 0.00013 41_[+1]_44 chr10:55358748-55358957 0.00013 5_[+1]_80 chr14:96415002-96415211 0.00013 57_[+1]_28 chr17:68535729-68535938 0.00014 32_[+1]_53 chr2:19286272-19286481 0.00015 15_[+1]_70 chr3:71355139-71355348 0.00015 32_[+1]_53 chr4:124874120-124874329 0.00015 23_[-1]_62 chr10:16685596-16685805 0.00016 42_[-1]_43 chr4:62777034-62777243 0.00017 62_[+1]_23 chr2:55361007-55361216 0.00018 52_[+1]_33 chr5:125345422-125345631 0.00018 63_[+1]_22 chr1:15710969-15711159 0.00018 38_[-1]_47 chr14:73592495-73592704 0.00021 38_[-1]_47 chr5:88999679-88999888 0.00024 72_[-1]_13 chr7:70165396-70165605 0.00024 37_[-1]_48 chr5:22621352-22621561 0.00025 38_[+1]_47 chr22:45427783-45427992 0.00027 50_[+1]_35 chr4:141479293-141479502 0.00028 16_[+1]_69 chr13:74341366-74341575 0.00036 18_[-1]_67 chr17:49124223-49124432 0.00041 49_[-1]_36 chr7:121578596-121578805 0.00041 74_[-1]_11 chr13:55449330-55449539 0.00043 2_[-1]_83 chr5:17401754-17401963 0.00048 1_[-1]_84 chr2:188089824-188090033 0.0006 16_[-1]_69 chr10:123650829-12365103 0.00073 83_[-1]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTTTRWTATGCAAA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYTTTRWTATGCAAA width=15 seqs=197 chr12:99420526-99420735 ( 31) CTTTTGTTATGCAAA 1 chr15:35840410-35840619 ( 11) CCTTTGATATGCAAA 1 chr18:29405911-29406120 ( 46) CCTTTGATATGCAAA 1 chr4:115416938-115417147 ( 40) CCTTTGATATGCAAA 1 chr6:147769348-147769557 ( 14) CCTTTGATATGCAAA 1 chr3:95646101-95646310 ( 81) CCTTTGATATGCAAA 1 chr7:25772602-25772811 ( 78) CCTTTGATATGCAAA 1 chr10:9953519-9953728 ( 39) CTTTTATTATGCAAA 1 chr3:52201257-52201466 ( 26) CTTTTATTATGCAAA 1 chr4:159493015-159493224 ( 53) CTTTTATTATGCAAA 1 chr19:21882084-21882293 ( 68) CTTTTATTATGCAAA 1 chr5:125393006-125393215 ( 4) CTTTTATTATGCAAA 1 chr12:23738725-23738934 ( 56) CTTTTATTATGCAAA 1 chr4:41329872-41330081 ( 50) CTTTTATTATGCAAA 1 chr7:101218498-101218707 ( 29) CTTTTGTTATGCAGA 1 chr12:119419088-11941929 ( 38) CTTTTGTTATGCAGA 1 chr13:50573231-50573440 ( 64) TTTTTGTTATGCAAA 1 chr3:62869787-62869996 ( 65) TTTTTGTTATGCAAA 1 chr7:83907090-83907299 ( 50) TTTTTGTTATGCAAA 1 chr12:24368972-24369181 ( 23) CCTTTGTTATGCTAA 1 chr2:111446477-111446686 ( 54) CCTTTGTTATGCTAA 1 chr7:153128091-153128300 ( 39) CCTTTAATATGCAAA 1 chr6:21186269-21186478 ( 71) CTTTTGTTATGCTAA 1 chr8:40177527-40177736 ( 56) CTTTTGTTATGCTAA 1 chr2:203114726-203114935 ( 15) CTTTTAATATGCAAA 1 chr6:138519638-138519847 ( 53) CCTTTCATATGCAAA 1 chr11:340642-340851 ( 22) TCTTTGATATGCAAA 1 chr6:166778828-166779037 ( 29) CCATTGTTATGCAGA 1 chr13:39199030-39199239 ( 31) CTTTTATTATGCAGA 1 chr5:171407791-171408000 ( 61) CTTTTGTTATTCAAA 1 chr12:81078028-81078237 ( 43) CTTTTATTATGCAGA 1 chr7:99541984-99542193 ( 30) CTTTTATTATGCAGA 1 chr6:88408316-88408525 ( 23) CCTTTATTATGCTAA 1 chrX:16790044-16790253 ( 63) CCATGGTTATGCAAA 1 chr2:111445329-111445538 ( 67) GTATTGATATGCAAA 1 chr10:91318791-91319000 ( 84) GTATTGATATGCAAA 1 chr20:60011802-60012011 ( 49) TCTTTGTTATGCTAA 1 chr6:76830109-76830318 ( 56) TCTTAGTTATGCAAA 1 chr1:53441977-53442186 ( 42) TCTTTGTTATGCTAA 1 chr5:165515540-165515749 ( 16) TTTTAGTTATGCAAA 1 chr17:70147263-70147472 ( 19) CTATTGTCATGCAAA 1 chr15:92661485-92661694 ( 62) ACTTAGTTATGCAAA 1 chr6:55845579-55845788 ( 61) CTATTGTTATGTAAA 1 chr4:106476532-106476741 ( 35) CCATTATTATGCAGA 1 chr8:72628500-72628709 ( 62) CTTTTATTATGTAAA 1 chr7:150433139-150433348 ( 55) CCTTTGAAATGCAAA 1 chr2:77750120-77750329 ( 12) CATTTCTTATGCAAA 1 chr7:37288032-37288241 ( 36) CCTTTGTGATGCAAA 1 chr12:131338192-13133840 ( 55) CTTTTGTTATTCAGA 1 chr9:128517759-128517968 ( 30) ACTTTGATATGCTAA 1 chr2:189320884-189321093 ( 10) ACATTCTTATGCAAA 1 chr12:1529129-1529338 ( 56) GCTTTATTATGCTAA 1 chr13:79855495-79855704 ( 48) CTTTTGTTATGTTAA 1 chr7:95458464-95458673 ( 65) CTTTGCATATGCAAA 1 chr14:99117412-99117621 ( 84) CCATTATTATTCAAA 1 chr1:220512255-220512464 ( 57) GGTTTGTTATGCAGA 1 chr16:65806391-65806600 ( 67) GGTTTGTTATGCAGA 1 chr1:17796686-17796739 ( 32) GGTTTGTTATGCAGA 1 chr10:22242532-22242741 ( 67) CTTTTGTTATTCATA 1 chr14:67911157-67911366 ( 67) CTTTTGTTATTCATA 1 chr4:69138701-69138910 ( 66) CTTTTGTTATTCATA 1 chr8:127478375-127478584 ( 57) CTTTTGTTATTCATA 1 chr11:119461617-11946182 ( 52) CTTTTGTTATTCATA 1 chr3:113472352-113472561 ( 5) GTATTGTTATGTAAA 1 chr9:31412213-31412422 ( 33) CTTTGGTTATTCAAA 1 chr20:415043-415252 ( 34) CTTTTGTTATTCATA 1 chr1:97025542-97025751 ( 13) CTTTTGTTATTCATA 1 chr4:62718861-62719070 ( 67) CTTTTGTTATTCATA 1 chr8:74989430-74989639 ( 57) CTTTTGTTATTCATA 1 chr3:73812116-73812325 ( 72) CTTTTGTTATTCATA 1 chr15:52684554-52684763 ( 72) ACTTTGTTATGCTGA 1 chr18:9643543-9643752 ( 34) TATTTATTATGCAAA 1 chr1:237402700-237402909 ( 52) CTTTTATTATGTAGA 1 chr4:14086261-14086470 ( 64) GCTTTGTTATGTAGA 1 chr6:19663815-19664024 ( 31) CTTTTGTTATTTAAA 1 chr8:74711127-74711336 ( 79) GCTTTGAAATGCAAA 1 chr6:78901892-78902101 ( 79) ATTTACTTATGCAAA 1 chr18:27851758-27851967 ( 30) CCATGAATATGCAAA 1 chr16:19893521-19893730 ( 22) CCATGAATATGCAAA 1 chr9:10921756-10921965 ( 47) CTTTTGTAATGCATA 1 chr2:210384153-210384362 ( 21) TTTTTGAAATGCAAA 1 chr1:95126637-95126846 ( 76) CTACTGTTATGCAAA 1 chr3:155081166-155081375 ( 52) CGTTTATCATGCAAA 1 chr11:37619453-37619662 ( 41) TCTTTCATATGCTAA 1 chr2:81101600-81101809 ( 42) TTATTCTTATGCAGA 1 chr12:130255929-13025613 ( 15) GTTTTGTCATGCTAA 1 chr13:94796311-94796520 ( 35) TCTTACATATGCAAA 1 chr12:86343143-86343352 ( 63) TCCTTCTTATGCAAA 1 chr18:33431309-33431518 ( 19) ATTTAAATATGCAAA 1 chr3:181860827-181861036 ( 37) CTATTTATATGCAGA 1 chr8:111847914-111848123 ( 54) GCTTTCATATGTAAA 1 chr8:1606341-1606550 ( 76) GCTTTCATATGTAAA 1 chr11:132940055-13294026 ( 31) TAATTATTATGCAAA 1 chr8:94229870-94230079 ( 67) CCATTTATATGCTAA 1 chr18:57531466-57531675 ( 49) GCATTGTTATGTAGA 1 chr7:12463927-12464136 ( 84) GCATTGATATGCAAG 1 chr3:29517400-29517609 ( 56) TCTTTGTCATGTAAA 1 chr16:25867224-25867433 ( 36) CCTTTGTTATGGAGA 1 chr2:62582322-62582531 ( 35) TTATTATTATTCAAA 1 chr6:123150723-123150932 ( 58) TTTTTGTTATTCATA 1 chr18:52274907-52275116 ( 80) CTATAATCATGCAAA 1 chr6:124090210-124090419 ( 8) CTATTGTTATGCATG 1 chr21:20492970-20493179 ( 19) CTATTATCATGCTAA 1 chr4:189321045-189321254 ( 47) TTTATCTTATGCAAA 1 chr9:71487225-71487434 ( 56) GCTTAAATATGCAGA 1 chr2:184397337-184397546 ( 55) GCTATGTTATGCTAA 1 chr17:32077950-32078159 ( 70) GTTTTGATATGTTAA 1 chr12:57636546-57636643 ( 52) ATTTGCATATGCAAA 1 chr8:41981382-41981591 ( 23) CGCTTGTTATGCTAA 1 chr2:144649625-144649834 ( 78) ACTTAATTATGCTAA 1 chr2:168131704-168131913 ( 83) CTTTAGAGATGCAAA 1 chr1:38518876-38519085 ( 57) TCATGAATATGCAAA 1 chr22:30476218-30476427 ( 22) TCATGAATATGCAAA 1 chr10:121446855-12144706 ( 51) CTATTGTGATGCTAA 1 chr5:12323784-12323993 ( 1) GCTTTTATATGTAAA 1 chr2:147298128-147298337 ( 52) CTCTGTTTATGCAAA 1 chr14:88831188-88831397 ( 32) TTTTTGTCATGTAGA 1 chr8:16141813-16142022 ( 67) CCTTTCAAATGTAAA 1 chr7:128898597-128898806 ( 47) CCATTATAATGTAAA 1 chr12:39845850-39846059 ( 76) GCATTCAAATGCAAA 1 chr13:107511293-10751150 ( 14) GGTTATTTATGCAAA 1 chr17:38579183-38579392 ( 61) ATTTGCATATGCAGA 1 chr4:113680666-113680875 ( 53) CTTTTCACATGCTGA 1 chr8:125976403-125976612 ( 25) CCTTTGTTATTCATG 1 chr21:17125492-17125701 ( 19) TCATTATCATGCTAA 1 chr1:1711535-1711744 ( 58) GCATTATTATGTTAA 1 chr2:214991982-214992191 ( 30) AGTTTCTTATGTAAA 1 chr13:35474513-35474722 ( 34) TCTTTGTTATGGAGA 1 chr7:89853632-89853841 ( 26) TGATTTATATGCAAA 1 chr3:115578293-115578502 ( 36) GTCTTATTATTCAAA 1 chr8:130527361-130527570 ( 55) GTCTTGTTATGTAGA 1 chr17:32935083-32935292 ( 51) CTTTTGTTATTCATG 1 chr10:3006476-3006685 ( 78) TTCTTGTCATGCAGA 1 chr12:9064550-9064759 ( 62) TCAGTGTTATGCAGA 1 chr11:100849318-10084942 ( 20) CTTTTGTCATGTTGA 1 chr18:18966922-18967131 ( 69) AATTTCTTATGTAAA 1 chr2:155446160-155446369 ( 52) ACTTGAATATGCATA 1 chr6:163681478-163681687 ( 80) AATGTGTTATGCAAA 1 chr3:121312380-121312589 ( 30) AATTAGTTATGTAAA 1 chr13:79232439-79232648 ( 43) TCTTTGTGATGCAAG 1 chr5:74112826-74113035 ( 31) CCATTATCATGTTAA 1 chr5:108022457-108022666 ( 35) GCATTCACATGCTAA 1 chr6:115736613-115736822 ( 68) CTCTTGTCATGTAGA 1 chr2:177610764-177610973 ( 6) GCTAATTTATGCAAA 1 chr1:58066260-58066469 ( 43) CAATGCTTATGCTAA 1 chr5:87966993-87967202 ( 24) GGTTAAATATGCTAA 1 chr1:183372764-183372973 ( 64) ACATTTAAATGCAAA 1 chr14:23721778-23721987 ( 86) GCATTCTCATGCTGA 1 chr20:48311199-48311408 ( 53) CTTTGCATATGCACA 1 chr6:22878266-22878475 ( 2) ACATAAATATGCAAG 1 chr18:56179480-56179689 ( 30) CCATTGATATTCATG 1 chr1:202536887-202537096 ( 79) ACTTTGTTATTCATG 1 chr18:25297863-25298072 ( 52) TCATTGTCATGGAAA 1 chr5:129914137-129914346 ( 17) TAATTGTCATTCAAA 1 chr12:51611769-51611978 ( 12) CATAATTTATGCAAA 1 chr9:92050190-92050399 ( 46) CCATTCCTATGTAAA 1 chr9:92310600-92310809 ( 62) GCAAATTTATGCAAA 1 chr10:89385526-89385735 ( 15) AGTTTCTTATGTATA 1 chr4:113570094-113570303 ( 70) CATTTAACATGTAGA 1 chr1:202662204-202662413 ( 59) ATTTAGAAATGCAAG 1 chr4:5201023-5201232 ( 17) ACAAAGATATGCTAA 1 chr11:128452477-12845268 ( 37) CTTTTCTCCTGCAAA 1 chr3:155080783-155080992 ( 20) TGTGGGATATGCAAA 1 chr1:73013155-73013364 ( 28) GTTCAATTATGCTAA 1 chr4:137718160-137718369 ( 55) AGTTAAAAATGCAAA 1 chr9:75295582-75295791 ( 63) CATTAGAGATGCTAA 1 chr18:52055848-52056057 ( 80) CTATTTTAATGTTAA 1 chr14:44224169-44224378 ( 26) GCCTTTTTATTCTAA 1 chr9:34602060-34602269 ( 19) GTTGAATTATTCAAA 1 chr3:185826996-185827205 ( 69) CATAAATTATGTAAA 1 chr4:76994116-76994325 ( 30) CGTAAATTATGCAAG 1 chr4:113021192-113021401 ( 40) TCATGAATATTCATA 1 chr2:74544073-74544282 ( 42) TCATGAATATTCATA 1 chr10:55358748-55358957 ( 6) TTATTCATAGGCAAA 1 chr14:96415002-96415211 ( 58) CTTTACAAATGCAGG 1 chr17:68535729-68535938 ( 33) GTAGATATATGCAAA 1 chr2:19286272-19286481 ( 16) CTAATTTTATTCATA 1 chr3:71355139-71355348 ( 33) GATTAAATATGCAGG 1 chr4:124874120-124874329 ( 24) GCACATATATGCAAA 1 chr10:16685596-16685805 ( 43) AGTCTGTTATGTAGA 1 chr4:62777034-62777243 ( 63) TTTGTCATATGTTAA 1 chr2:55361007-55361216 ( 53) TTAATCACATGCTAA 1 chr5:125345422-125345631 ( 64) ACATTGTCATACAAA 1 chr1:15710969-15711159 ( 39) GACTGATTATGTAAA 1 chr14:73592495-73592704 ( 39) CTTAATTTATGCACA 1 chr5:88999679-88999888 ( 73) ACATTGTGATGCTGG 1 chr7:70165396-70165605 ( 38) CTCTTGTCATTCATG 1 chr5:22621352-22621561 ( 39) ATTAGGATATGCACA 1 chr22:45427783-45427992 ( 51) ATTCAGATATTCTAA 1 chr4:141479293-141479502 ( 17) ACATTTAAATGTTAA 1 chr13:74341366-74341575 ( 19) TGCATGACATGCAGA 1 chr17:49124223-49124432 ( 50) AATAAATTATGTAGA 1 chr7:121578596-121578805 ( 75) GTTTTGCAATGTATA 1 chr13:55449330-55449539 ( 3) TCATGTTAATGCTTA 1 chr5:17401754-17401963 ( 2) AATAAATTATGTTAA 1 chr2:188089824-188090033 ( 17) ATCTAGTTATTGAGA 1 chr10:123650829-12365103 ( 84) ATATGTAAATGCAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTTTRWTATGCAAA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 22054 bayes= 8.40213 E= 1.0e-308 -84 110 -25 -55 -180 83 -152 69 4 -184 -1427 120 -189 -310 -284 162 -71 -1427 -110 136 -12 -52 118 -155 25 -442 -1427 121 -180 -90 -284 145 182 -542 -1427 -1427 -1427 -1427 -542 182 -579 -1427 194 -84 -1427 187 -342 -63 149 -1427 -1427 -44 124 -384 -17 -115 171 -1427 -152 -1427 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTTTRWTATGCAAA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 197 E= 1.0e-308 0.157360 0.467005 0.182741 0.192893 0.081218 0.385787 0.076142 0.456853 0.289340 0.060914 0.000000 0.649746 0.076142 0.025381 0.030457 0.868020 0.172589 0.000000 0.101523 0.725888 0.258883 0.152284 0.492386 0.096447 0.335025 0.010152 0.000000 0.654822 0.081218 0.116751 0.030457 0.771574 0.994924 0.005076 0.000000 0.000000 0.000000 0.000000 0.005076 0.994924 0.005076 0.000000 0.837563 0.157360 0.000000 0.796954 0.020305 0.182741 0.791878 0.000000 0.000000 0.208122 0.664975 0.015228 0.192893 0.126904 0.923858 0.000000 0.076142 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTTTRWTATGCAAA MEME-1 regular expression -------------------------------------------------------------------------------- C[TC][TA]TT[GA][TA]TATGC[AT]AA -------------------------------------------------------------------------------- Time 55.84 secs. ******************************************************************************** ******************************************************************************** MOTIF AGTCACCTCATTAGCATAAACTCAGGTGTG MEME-2 width = 30 sites = 11 llr = 335 E-value = 7.2e-049 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGTCACCTCATTAGCATAAACTCAGGTGTG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 9:219::::a::a1:9:aaa:1:83:1121 pos.-specific C :::8:872a:::::a1::::819111::1: probability G 191:1::::::::9::::::12::6818:9 matrix T :171:238::aa::::a:::1611:1817: bits 2.2 * * 2.0 * * 1.8 * ******* **** * * 1.5 * * ******* **** * * Relative 1.3 ** **** ************* * * * * Entropy 1.1 ** ****************** ** *** * (44.0 bits) 0.9 ** ****************** ****** * 0.7 ********************* ******** 0.4 ****************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel AGTCACCTCATTAGCATAAACTCAGGTGTG consensus T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCACCTCATTAGCATAAACTCAGGTGTG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr3:73812116-73812325 + 25 8.08e-18 ccctccccta agacacctcattagcataaactcaggtgtg gaaggaaagg chr11:119461617-11946182 + 6 1.22e-17 ctgtg agtcatctcattagcataaactcaggtgtg gctgaaaagg chr1:97025542-97025751 - 44 5.27e-17 TCCCGCCCTA AGTCACCTCATTAGCATAAACTTAGGTGTG ATTGAAAGAG chr6:123150723-123150932 + 13 2.39e-16 actttccaaa agtcacttcattaacataaactcaggtgtg gttgaagggg chr1:158015553-158015762 + 9 8.28e-16 caatccag agtcacctcattagcataaaccccagtgtg caatgaataa chr8:74989430-74989639 + 11 1.15e-15 GCCCCTTTCC AGATACTTCAttagcataaactcaggtgtg atctaaacag chr4:62718861-62719070 + 22 1.94e-15 ccccactttg ggtcaccccattagcataaactcagctgtg tttgaagggg chr17:32935083-32935292 + 5 1.50e-14 ctgg agtcactccattagcataaactcaggttta gttgaaaagg chr8:125976403-125976612 - 55 1.89e-13 GCTCACCAAG AGTAGCCTCATTAGCATAAATGCAAGTGAG GTCTGAGGGG chr12:131338192-13133840 + 10 4.77e-13 ccctccagg agtcacctcattagcataaacactagaacg ggtgaaaggg chr5:108022457-108022666 + 69 3.30e-11 GAAAAAAAAA ATGCATCTCATTAGCCTAAAGGCACTGGAG TC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCACCTCATTAGCATAAACTCAGGTGTG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:73812116-73812325 8.1e-18 24_[+2]_46 chr11:119461617-11946182 1.2e-17 5_[+2]_65 chr1:97025542-97025751 5.3e-17 43_[-2]_27 chr6:123150723-123150932 2.4e-16 12_[+2]_58 chr1:158015553-158015762 8.3e-16 8_[+2]_62 chr8:74989430-74989639 1.2e-15 10_[+2]_60 chr4:62718861-62719070 1.9e-15 21_[+2]_49 chr17:32935083-32935292 1.5e-14 4_[+2]_66 chr8:125976403-125976612 1.9e-13 54_[-2]_16 chr12:131338192-13133840 4.8e-13 9_[+2]_61 chr5:108022457-108022666 3.3e-11 68_[+2]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCACCTCATTAGCATAAACTCAGGTGTG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGTCACCTCATTAGCATAAACTCAGGTGTG width=30 seqs=11 chr3:73812116-73812325 ( 25) AGACACCTCATTAGCATAAACTCAGGTGTG 1 chr11:119461617-11946182 ( 6) AGTCATCTCATTAGCATAAACTCAGGTGTG 1 chr1:97025542-97025751 ( 44) AGTCACCTCATTAGCATAAACTTAGGTGTG 1 chr6:123150723-123150932 ( 13) AGTCACTTCATTAACATAAACTCAGGTGTG 1 chr1:158015553-158015762 ( 9) AGTCACCTCATTAGCATAAACCCCAGTGTG 1 chr8:74989430-74989639 ( 11) AGATACTTCATTAGCATAAACTCAGGTGTG 1 chr4:62718861-62719070 ( 22) GGTCACCCCATTAGCATAAACTCAGCTGTG 1 chr17:32935083-32935292 ( 5) AGTCACTCCATTAGCATAAACTCAGGTTTA 1 chr8:125976403-125976612 ( 55) AGTAGCCTCATTAGCATAAATGCAAGTGAG 1 chr12:131338192-13133840 ( 10) AGTCACCTCATTAGCATAAACACTAGAACG 1 chr5:108022457-108022666 ( 69) ATGCATCTCATTAGCCTAAAGGCACTGGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCACCTCATTAGCATAAACTCAGGTGTG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 18199 bayes= 11.0466 E= 7.2e-049 169 -1010 -126 -1010 -1010 -1010 206 -163 -63 -1010 -126 136 -163 191 -1010 -163 169 -1010 -126 -1010 -1010 191 -1010 -63 -1010 174 -1010 -5 -1010 -26 -1010 153 -1010 220 -1010 -1010 182 -1010 -1010 -1010 -1010 -1010 -1010 182 -1010 -1010 -1010 182 182 -1010 -1010 -1010 -163 -1010 206 -1010 -1010 220 -1010 -1010 169 -126 -1010 -1010 -1010 -1010 -1010 182 182 -1010 -1010 -1010 182 -1010 -1010 -1010 182 -1010 -1010 -1010 -1010 191 -126 -163 -163 -126 -26 117 -1010 206 -1010 -163 153 -126 -1010 -163 -5 -126 155 -1010 -1010 -126 191 -163 -163 -1010 -126 153 -163 -1010 191 -163 -63 -126 -1010 136 -163 -1010 206 -1010 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCACCTCATTAGCATAAACTCAGGTGTG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 11 E= 7.2e-049 0.909091 0.000000 0.090909 0.000000 0.000000 0.000000 0.909091 0.090909 0.181818 0.000000 0.090909 0.727273 0.090909 0.818182 0.000000 0.090909 0.909091 0.000000 0.090909 0.000000 0.000000 0.818182 0.000000 0.181818 0.000000 0.727273 0.000000 0.272727 0.000000 0.181818 0.000000 0.818182 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.090909 0.000000 0.909091 0.000000 0.000000 1.000000 0.000000 0.000000 0.909091 0.090909 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.818182 0.090909 0.090909 0.090909 0.090909 0.181818 0.636364 0.000000 0.909091 0.000000 0.090909 0.818182 0.090909 0.000000 0.090909 0.272727 0.090909 0.636364 0.000000 0.000000 0.090909 0.818182 0.090909 0.090909 0.000000 0.090909 0.818182 0.090909 0.000000 0.818182 0.090909 0.181818 0.090909 0.000000 0.727273 0.090909 0.000000 0.909091 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCACCTCATTAGCATAAACTCAGGTGTG MEME-2 regular expression -------------------------------------------------------------------------------- AGTCAC[CT]TCATTAGCATAAACTCA[GA]GTGTG -------------------------------------------------------------------------------- Time 100.92 secs. ******************************************************************************** ******************************************************************************** MOTIF AAACCCTTGGAATTTCCTGAGTGATAGGA MEME-3 width = 29 sites = 11 llr = 307 E-value = 2.0e-038 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAACCCTTGGAATTTCCTGAGTGATAGGA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 999::1:1:1aa:::::11a22:8:7317 pos.-specific C 1::778::::::11:991:::11:1::1: probability G :11:::2:a8::::1:1:9:8:92:2772 matrix T :::33189:1::9991:8:::7::91:11 bits 2.2 * 2.0 * 1.8 * ** ** ** * 1.5 * ** ** *** * Relative 1.3 ****** ********** *** * * * Entropy 1.1 ********************* *** * (40.3 bits) 0.9 ********************* ******* 0.7 ***************************** 0.4 ***************************** 0.2 ***************************** 0.0 ----------------------------- Multilevel AAACCCTTGGAATTTCCTGAGTGATAGGA consensus TT A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAACCCTTGGAATTTCCTGAGTGATAGGA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chr14:67911157-67911366 + 34 1.05e-16 agagctcata agacccttggaatttcctgagtgatagga atgtcttttg chr2:111446477-111446686 - 72 1.74e-16 . AAACCCTTGGAATTTCCTGAGTCATAGGA GTGCCTTTGT chr20:60011802-60012011 - 67 8.62e-16 TCTAA AAACCCTTGGAATTTCCTGAGAGATTGGA GTGTCTTTGT chr8:127478375-127478584 + 24 1.42e-15 agagatagta aaatccttgaaatttcctgagtgatagga gtgtcttttg chr1:53441977-53442186 - 60 2.75e-14 GGAGCTTCCA AAGCCCTTGGAATTTCCTGAATGATAGAA GTGTCTTTGT chr8:41981382-41981591 - 47 3.47e-14 AGCTTCAAAA AAACTCTTGGAATTTCCTGAGTGACAGCG ACAGGAATGC chr5:171407791-171408000 + 19 5.01e-14 acaaaagcga aaattcttggaattgcctgagtgatagta ttgagaggag chr20:415043-415252 - 51 1.06e-12 GGGTCTCCTA CAACCCTTGGAATTTCGTGAGTGGTGAGT GTCTTTTGTT chr1:158015553-158015762 - 58 1.32e-12 CAGAAGTTTT AAACTCGTGGAACTTCCCAAGTGATAAGA ATGTCTTTGT chr5:177607243-177607452 - 12 2.18e-11 ATTGTTCTTA AAACCTGAGGAATCTCCAGAGAGGTAAGA GTGTCTTTGA chr22:23585183-23585392 + 59 2.69e-11 caagctccta aaatcattgtaattttctgaacgatgggg tgataggagc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAACCCTTGGAATTTCCTGAGTGATAGGA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:67911157-67911366 1.1e-16 33_[+3]_38 chr2:111446477-111446686 1.7e-16 71_[-3] chr20:60011802-60012011 8.6e-16 66_[-3]_5 chr8:127478375-127478584 1.4e-15 23_[+3]_48 chr1:53441977-53442186 2.8e-14 59_[-3]_12 chr8:41981382-41981591 3.5e-14 46_[-3]_25 chr5:171407791-171408000 5e-14 18_[+3]_53 chr20:415043-415252 1.1e-12 50_[-3]_21 chr1:158015553-158015762 1.3e-12 57_[-3]_14 chr5:177607243-177607452 2.2e-11 11_[-3]_60 chr22:23585183-23585392 2.7e-11 58_[+3]_13 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAACCCTTGGAATTTCCTGAGTGATAGGA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAACCCTTGGAATTTCCTGAGTGATAGGA width=29 seqs=11 chr14:67911157-67911366 ( 34) AGACCCTTGGAATTTCCTGAGTGATAGGA 1 chr2:111446477-111446686 ( 72) AAACCCTTGGAATTTCCTGAGTCATAGGA 1 chr20:60011802-60012011 ( 67) AAACCCTTGGAATTTCCTGAGAGATTGGA 1 chr8:127478375-127478584 ( 24) AAATCCTTGAAATTTCCTGAGTGATAGGA 1 chr1:53441977-53442186 ( 60) AAGCCCTTGGAATTTCCTGAATGATAGAA 1 chr8:41981382-41981591 ( 47) AAACTCTTGGAATTTCCTGAGTGACAGCG 1 chr5:171407791-171408000 ( 19) AAATTCTTGGAATTGCCTGAGTGATAGTA 1 chr20:415043-415252 ( 51) CAACCCTTGGAATTTCGTGAGTGGTGAGT 1 chr1:158015553-158015762 ( 58) AAACTCGTGGAACTTCCCAAGTGATAAGA 1 chr5:177607243-177607452 ( 12) AAACCTGAGGAATCTCCAGAGAGGTAAGA 1 chr22:23585183-23585392 ( 59) AAATCATTGTAATTTTCTGAACGATGGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAACCCTTGGAATTTCCTGAGTGATAGGA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 18456 bayes= 11.0668 E= 2.0e-038 169 -126 -1010 -1010 169 -1010 -126 -1010 169 -1010 -126 -1010 -1010 174 -1010 -5 -1010 174 -1010 -5 -163 191 -1010 -163 -1010 -1010 -26 153 -163 -1010 -1010 169 -1010 -1010 220 -1010 -163 -1010 191 -163 182 -1010 -1010 -1010 182 -1010 -1010 -1010 -1010 -126 -1010 169 -1010 -126 -1010 169 -1010 -1010 -126 169 -1010 206 -1010 -163 -1010 206 -126 -1010 -163 -126 -1010 153 -163 -1010 206 -1010 182 -1010 -1010 -1010 -63 -1010 191 -1010 -63 -126 -1010 136 -1010 -126 206 -1010 153 -1010 -26 -1010 -1010 -126 -1010 169 136 -1010 -26 -163 -5 -1010 174 -1010 -163 -126 174 -163 136 -1010 -26 -163 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAACCCTTGGAATTTCCTGAGTGATAGGA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 11 E= 2.0e-038 0.909091 0.090909 0.000000 0.000000 0.909091 0.000000 0.090909 0.000000 0.909091 0.000000 0.090909 0.000000 0.000000 0.727273 0.000000 0.272727 0.000000 0.727273 0.000000 0.272727 0.090909 0.818182 0.000000 0.090909 0.000000 0.000000 0.181818 0.818182 0.090909 0.000000 0.000000 0.909091 0.000000 0.000000 1.000000 0.000000 0.090909 0.000000 0.818182 0.090909 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.090909 0.000000 0.909091 0.000000 0.090909 0.000000 0.909091 0.000000 0.000000 0.090909 0.909091 0.000000 0.909091 0.000000 0.090909 0.000000 0.909091 0.090909 0.000000 0.090909 0.090909 0.000000 0.818182 0.090909 0.000000 0.909091 0.000000 1.000000 0.000000 0.000000 0.000000 0.181818 0.000000 0.818182 0.000000 0.181818 0.090909 0.000000 0.727273 0.000000 0.090909 0.909091 0.000000 0.818182 0.000000 0.181818 0.000000 0.000000 0.090909 0.000000 0.909091 0.727273 0.000000 0.181818 0.090909 0.272727 0.000000 0.727273 0.000000 0.090909 0.090909 0.727273 0.090909 0.727273 0.000000 0.181818 0.090909 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAACCCTTGGAATTTCCTGAGTGATAGGA MEME-3 regular expression -------------------------------------------------------------------------------- AAA[CT][CT]CTTGGAATTTCCTGAGTGATA[GA]GA -------------------------------------------------------------------------------- Time 146.74 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:15710969-15711159 1.29e-01 100 chr11:100849318-10084942 1.33e-02 19_[+1(1.60e-05)]_66 chr12:57636546-57636643 2.84e-03 51_[+1(5.38e-06)]_32 chr7:150433139-150433348 3.79e-04 54_[+1(4.43e-07)]_31 chr1:202536887-202537096 8.89e-02 78_[+1(4.50e-05)]_7 chr4:106476532-106476741 2.25e-04 34_[+1(3.69e-07)]_25_[+1(1.95e-06)]_\ 11 chr1:183372764-183372973 4.20e-02 63_[+1(3.46e-05)]_22 chr4:113573462-113573671 7.17e-01 100 chr7:83907090-83907299 3.92e-05 49_[+1(3.00e-08)]_36 chr13:94796311-94796520 7.34e-03 34_[-1(2.53e-06)]_51 chr13:35474513-35474722 1.26e-03 10_[-1(6.80e-06)]_8_[-1(1.44e-05)]_\ 52 chr16:19893521-19893730 8.69e-03 21_[+1(1.95e-06)]_28_[+1(4.75e-06)]_\ 21 chr6:166778828-166779037 5.11e-04 28_[+1(8.69e-08)]_57 chr8:40177527-40177736 5.82e-07 55_[+1(4.75e-08)]_6_[+1(1.60e-05)]_\ 9 chr7:37288032-37288241 3.18e-03 35_[+1(5.22e-07)]_50 chrX:73067050-73067259 2.90e-01 100 chr2:111446477-111446686 5.62e-19 53_[-1(3.67e-08)]_3_[-3(1.74e-16)] chr5:95770048-95770257 7.11e-01 100 chr1:17796686-17796739 5.63e-04 31_[+1(1.28e-06)]_8 chr3:29517400-29517609 4.76e-03 55_[+1(4.21e-06)]_30 chr17:32077950-32078159 6.13e-03 69_[+1(5.38e-06)]_16 chr2:214991982-214992191 4.39e-03 29_[+1(1.44e-05)]_56 chr4:124874120-124874329 1.04e-01 100 chr12:130255929-13025613 5.88e-03 14_[-1(2.53e-06)]_71 chr13:74341366-74341575 2.95e-01 100 chr6:21186269-21186478 5.51e-06 11_[-2(5.27e-05)]_29_[+1(4.75e-08)]_\ 15 chr1:53441977-53442186 2.34e-15 41_[-1(2.65e-07)]_3_[-3(2.75e-14)]_\ 12 chr1:1711535-1711744 9.30e-04 57_[-1(1.44e-05)]_28 chr13:79232439-79232648 2.61e-03 42_[-1(2.16e-05)]_43 chr2:122437846-122438055 7.99e-01 100 chr15:52684554-52684763 4.01e-04 71_[-1(1.50e-06)]_14 chr6:76830109-76830318 2.94e-05 55_[+1(2.65e-07)]_30 chr12:39845850-39846059 1.46e-02 75_[+1(1.30e-05)]_10 chr10:121446855-12144706 1.01e-03 50_[-1(7.59e-06)]_8_[-1(9.40e-05)]_\ 12 chr3:73812116-73812325 2.02e-16 24_[+2(8.08e-18)]_17_[-1(1.50e-06)]_\ 14 chr12:119419088-11941929 1.79e-04 37_[+1(2.54e-08)]_48 chr16:25867224-25867433 1.42e-02 35_[+1(4.75e-06)]_50 chr8:72628500-72628709 2.45e-05 61_[+1(4.43e-07)]_24 chr2:81101600-81101809 9.76e-04 41_[+1(2.53e-06)]_44 chr20:60011802-60012011 1.84e-17 48_[-1(2.65e-07)]_3_[-3(8.62e-16)]_\ 5 chr7:12463927-12464136 7.72e-03 62_[-1(1.96e-05)]_6_[-1(4.21e-06)]_\ 2 chr11:37619453-37619662 2.05e-03 40_[+1(2.53e-06)]_12_[-1(2.53e-06)]_\ 18 chr18:57531466-57531675 9.60e-04 48_[-1(4.21e-06)]_37 chr7:153128091-153128300 3.03e-04 38_[+1(4.75e-08)]_47 chr5:29042389-29042598 2.59e-01 100 chr2:188089824-188090033 5.17e-01 100 chr13:79855495-79855704 1.91e-03 47_[+1(8.28e-07)]_38 chr18:56179480-56179689 1.11e-02 29_[+1(4.50e-05)]_56 chr7:121578596-121578805 1.00e-01 100 chr12:9064550-9064759 2.56e-03 61_[+1(1.60e-05)]_24 chr6:163681478-163681687 2.25e-03 79_[+1(1.96e-05)]_6 chr17:70147263-70147472 1.70e-03 18_[+1(3.15e-07)]_67 chr16:65806391-65806600 2.94e-03 66_[-1(1.28e-06)]_19 chr10:16685596-16685805 2.21e-02 100 chr18:18966922-18967131 9.53e-03 42_[+1(4.50e-05)]_11_[+1(1.77e-05)]_\ 17 chr11:57092435-57092644 6.79e-01 100 chr12:131338192-13133840 1.02e-12 9_[+2(4.77e-13)]_15_[-1(6.10e-07)]_\ 31 chr7:101218498-101218707 1.84e-06 28_[-1(2.54e-08)]_20_[-2(3.94e-05)]_\ 7 chr2:210384153-210384362 4.79e-04 20_[-1(2.22e-06)]_65 chr9:75295582-75295791 1.28e-02 62_[-1(8.05e-05)]_23 chr10:3006476-3006685 1.89e-02 77_[-1(1.60e-05)]_8 chr11:340642-340851 4.55e-04 21_[-1(6.76e-08)]_33_[-1(8.48e-06)]_\ 16 chr5:129914137-129914346 1.20e-01 16_[+1(4.92e-05)]_69 chr19:48948750-48948959 8.32e-01 100 chr3:155081166-155081375 8.77e-03 51_[+1(2.53e-06)]_34 chr10:123650829-12365103 4.71e-01 100 chr7:25772602-25772811 6.89e-05 16_[-1(4.75e-08)]_46_[-1(5.16e-09)]_\ 8 chr9:25227389-25227598 2.71e-01 100 chr18:33431309-33431518 5.69e-03 18_[+1(2.91e-06)]_67 chr10:91318791-91319000 1.51e-04 83_[-1(2.65e-07)]_2 chr14:87121052-87121261 6.82e-01 100 chr18:27851758-27851967 2.88e-04 29_[+1(1.95e-06)]_56 chr8:74711127-74711336 2.89e-03 78_[-1(1.71e-06)]_7 chr8:70889629-70889838 1.22e-01 100 chr9:10921756-10921965 8.76e-03 46_[-1(2.22e-06)]_39 chr2:222890627-222890836 3.46e-01 100 chr6:79756884-79757093 2.20e-01 100 chr4:41329872-41330081 7.68e-06 49_[+1(1.82e-08)]_36 chr12:23738725-23738934 1.28e-06 55_[-1(1.82e-08)]_30 chr20:48311199-48311408 1.30e-02 52_[+1(4.13e-05)]_33 chr2:184397337-184397546 8.02e-04 54_[-1(5.38e-06)]_31 chr9:71487225-71487434 6.84e-03 55_[+1(5.38e-06)]_30 chr18:25297863-25298072 9.97e-03 51_[+1(4.92e-05)]_34 chr20:9553470-9553679 1.31e-01 100 chr8:74989430-74989639 2.27e-14 10_[+2(1.15e-15)]_16_[-1(1.50e-06)]_\ 29 chr5:165515540-165515749 1.24e-06 15_[-1(3.15e-07)]_26_[-2(1.59e-05)]_\ 14 chr10:21571028-21571237 8.36e-01 100 chr4:189321045-189321254 6.28e-03 46_[-1(5.38e-06)]_39 chr15:71378207-71378416 4.52e-01 100 chr7:47520639-47520848 3.69e-01 100 chr2:168131704-168131913 9.98e-07 45_[-2(2.46e-06)]_7_[+1(6.03e-06)]_\ 3 chr5:87966993-87967202 2.21e-02 23_[+1(3.16e-05)]_62 chr5:22621352-22621561 2.07e-01 100 chr21:17125492-17125701 1.12e-02 18_[-1(1.44e-05)]_67 chr7:128898597-128898806 1.16e-03 46_[+1(1.30e-05)]_39 chr4:62718861-62719070 3.26e-14 21_[+2(1.94e-15)]_15_[-1(1.50e-06)]_\ 19 chr21:20492970-20493179 1.71e-02 18_[+1(5.38e-06)]_67 chr4:62777034-62777243 2.07e-01 100 chr14:44224169-44224378 5.00e-02 25_[+1(9.40e-05)]_60 chr3:95646101-95646310 2.15e-05 80_[-1(5.16e-09)]_5 chr8:125976403-125976612 2.32e-11 24_[+1(1.44e-05)]_15_[-2(1.89e-13)]_\ 16 chr14:96415002-96415211 1.31e-02 100 chr1:220512255-220512464 6.18e-03 56_[+1(1.28e-06)]_29 chr3:121312380-121312589 6.44e-02 29_[+1(2.16e-05)]_56 chr8:1606341-1606550 1.74e-02 75_[-1(3.73e-06)]_10 chr8:16141813-16142022 3.63e-02 66_[+1(1.30e-05)]_19 chr8:111847914-111848123 5.31e-03 53_[-1(3.73e-06)]_6_[-1(1.60e-05)]_\ 11 chr1:97025542-97025751 1.19e-15 12_[+1(1.50e-06)]_16_[-2(5.27e-17)]_\ 27 chr2:155446160-155446369 3.44e-02 51_[-1(1.96e-05)]_34 chr3:71355139-71355348 2.24e-02 100 chr3:62869787-62869996 1.02e-04 64_[-1(3.00e-08)]_21 chr2:77750120-77750329 7.38e-05 11_[+1(5.22e-07)]_46_[-1(2.87e-05)]_\ 13 chr6:147769348-147769557 2.78e-05 13_[+1(5.16e-09)]_72 chr4:91752112-91752321 6.00e-02 100 chr8:89604386-89604595 9.74e-01 100 chr8:18416561-18416770 6.49e-01 100 chr5:12323784-12323993 3.92e-02 [+1(8.48e-06)]_85 chr7:99541984-99542193 6.01e-06 29_[+1(1.36e-07)]_56 chr1:158015553-158015762 6.42e-21 8_[+2(8.28e-16)]_19_[-3(1.32e-12)]_\ 14 chr12:81078028-81078237 2.38e-05 42_[+1(1.36e-07)]_43 chr16:6367950-6368159 9.32e-01 100 chr17:66030358-66030567 1.06e-02 68_[-2(2.03e-05)]_2 chr20:415043-415252 1.07e-11 33_[-1(1.50e-06)]_2_[-3(1.06e-12)]_\ 21 chr18:48944537-48944746 6.95e-01 100 chr4:115416938-115417147 2.58e-05 39_[-1(5.16e-09)]_46 chr22:30476218-30476427 2.74e-03 21_[-1(6.80e-06)]_64 chr1:208472025-208472234 1.05e-01 100 chr6:49310159-49310368 9.98e-01 100 chr1:95126637-95126846 9.37e-03 75_[-1(2.53e-06)]_10 chr5:171407791-171408000 8.58e-14 18_[+3(5.01e-14)]_13_[+1(1.36e-07)]_\ 25 chr10:55358748-55358957 4.29e-03 100 chr10:89385526-89385735 3.42e-02 14_[-1(5.82e-05)]_71 chr2:144649625-144649834 3.05e-03 29_[-1(9.40e-05)]_33_[+1(6.03e-06)]_\ 8 chr6:124090210-124090419 1.45e-03 7_[+1(5.38e-06)]_78 chr13:50573231-50573440 7.89e-06 63_[-1(3.00e-08)]_22 chr12:24368972-24369181 5.33e-05 22_[+1(3.67e-08)]_63 chr1:38518876-38519085 2.80e-02 56_[-1(6.80e-06)]_29 chr5:125393006-125393215 2.01e-04 3_[+1(1.82e-08)]_82 chr3:181860827-181861036 2.68e-03 36_[-1(3.29e-06)]_49 chr14:23721778-23721987 1.16e-01 85_[+1(3.78e-05)] chr13:55449330-55449539 2.13e-01 100 chr12:99420526-99420735 1.66e-05 30_[-1(3.59e-09)]_55 chr14:88831188-88831397 4.45e-03 31_[+1(1.30e-05)]_54 chr5:17401754-17401963 4.07e-02 100 chr2:203114726-203114935 2.86e-04 14_[+1(5.44e-08)]_71 chr4:113680666-113680875 4.76e-02 52_[-1(1.44e-05)]_33 chr12:12837532-12837741 9.64e-01 100 chr11:128452477-12845268 9.23e-02 36_[-1(7.43e-05)]_49 chr12:1529129-1529338 2.15e-04 55_[-1(8.28e-07)]_30 chr9:92310600-92310809 4.80e-03 61_[+1(5.82e-05)]_24 chr12:86343143-86343352 3.98e-04 62_[-1(2.91e-06)]_23 chr6:19663815-19664024 7.59e-04 14_[-1(6.85e-05)]_1_[+1(1.71e-06)]_\ 55 chr19:21882084-21882293 1.45e-05 67_[-1(1.82e-08)]_18 chr17:32935083-32935292 2.38e-12 4_[+2(1.50e-14)]_16_[-1(1.60e-05)]_\ 35 chr1:204679521-204679730 7.99e-01 100 chr9:31412213-31412422 2.59e-05 32_[+1(1.50e-06)]_15_[-3(2.32e-05)]_\ 9 chr3:113472352-113472561 1.94e-03 4_[+1(1.50e-06)]_81 chr3:185826996-185827205 5.97e-02 100 chr7:70165396-70165605 1.62e-01 100 chr14:99117412-99117621 4.64e-03 1_[+1(8.70e-05)]_67_[-1(1.28e-06)]_\ 2 chr18:52055848-52056057 2.96e-02 79_[+1(9.40e-05)]_6 chr2:180415022-180415231 5.76e-01 100 chr7:7250302-7250511 4.07e-01 100 chr6:119558518-119558727 8.50e-01 100 chr5:79039741-79039950 4.16e-01 100 chr8:130527361-130527570 1.55e-02 54_[-1(1.60e-05)]_31 chr9:92050190-92050399 3.26e-03 45_[+1(5.82e-05)]_40 chr13:39199030-39199239 3.79e-05 30_[-1(1.36e-07)]_55 chr9:34602060-34602269 9.35e-03 100 chr1:58066260-58066469 4.58e-03 42_[-1(3.16e-05)]_43 chr18:29405911-29406120 4.54e-05 45_[-1(5.16e-09)]_40 chr4:159493015-159493224 1.40e-06 52_[-1(1.82e-08)]_33 chr7:95458464-95458673 3.44e-03 64_[+1(1.11e-06)]_21 chr2:189320884-189321093 6.34e-04 9_[-1(8.28e-07)]_76 chr18:52274907-52275116 4.32e-03 79_[-1(5.38e-06)]_6 chr11:119461617-11946182 1.75e-17 5_[+2(1.22e-17)]_16_[-1(1.50e-06)]_\ 34 chr6:129065174-129065383 3.02e-01 100 chr4:114374431-114374640 1.24e-01 100 chr2:147298128-147298337 7.91e-03 51_[-1(1.30e-05)]_34 chr5:125345422-125345631 1.28e-01 100 chr17:38579183-38579392 2.05e-02 60_[+1(1.44e-05)]_25 chr11:96765054-96765263 4.39e-02 100 chr7:137890446-137890655 6.30e-01 100 chr8:94229870-94230079 6.18e-03 66_[-1(4.21e-06)]_19 chr3:44140216-44140425 7.12e-01 100 chr6:2989933-2990142 9.30e-01 100 chr4:14086261-14086470 5.29e-03 63_[+1(1.71e-06)]_22 chr8:127478375-127478584 2.44e-14 23_[+3(1.42e-15)]_4_[+1(1.50e-06)]_\ 29 chr4:113570094-113570303 5.47e-02 69_[-1(6.85e-05)]_16 chr22:23585183-23585392 1.17e-07 58_[+3(2.69e-11)]_13 chr3:52201257-52201466 4.11e-06 25_[-1(1.82e-08)]_20_[-2(7.69e-05)]_\ 10 chr10:9953519-9953728 2.25e-05 38_[-1(1.82e-08)]_47 chr5:119285376-119285585 4.45e-01 100 chr11:132940055-13294026 6.45e-04 30_[-1(4.21e-06)]_55 chr13:87534443-87534652 9.33e-01 100 chr17:68535729-68535938 1.30e-01 100 chr4:137718160-137718369 9.27e-02 54_[-1(8.05e-05)]_31 chr9:128517759-128517968 1.96e-03 29_[+1(8.28e-07)]_56 chr3:115578293-115578502 1.68e-02 35_[-1(1.60e-05)]_9_[+1(9.40e-05)]_\ 26 chr6:115736613-115736822 9.38e-03 67_[+1(2.87e-05)]_18 chr6:141474826-141475035 3.75e-01 100 chr2:74544073-74544282 6.58e-02 100 chr6:55845579-55845788 8.44e-04 60_[-1(3.69e-07)]_25 chr4:182087981-182088190 6.87e-01 100 chr2:111445329-111445538 1.07e-03 66_[+1(2.65e-07)]_19 chr22:45427783-45427992 3.03e-01 100 chr6:22878266-22878475 5.65e-02 1_[-1(4.50e-05)]_37_[-1(5.35e-05)]_\ 32 chrX:16790044-16790253 2.67e-04 62_[+1(2.65e-07)]_23 chr5:87971700-87971909 8.23e-01 100 chr17:49124223-49124432 2.52e-01 100 chr2:19286272-19286481 1.05e-02 39_[-3(9.14e-05)]_32 chr15:35840410-35840619 1.82e-05 10_[-1(5.16e-09)]_75 chr19:44124053-44124262 8.76e-01 100 chr19:39902706-39902915 9.08e-01 100 chr6:88408316-88408525 1.19e-04 22_[-1(1.83e-07)]_63 chr12:51611769-51611978 1.17e-01 11_[+1(5.82e-05)]_74 chr6:123150723-123150932 1.89e-14 12_[+2(2.39e-16)]_15_[-1(5.38e-06)]_\ 28 chr3:132101404-132101613 5.89e-01 100 chr13:107511293-10751150 4.45e-05 13_[-1(1.44e-05)]_25_[+2(4.60e-05)]_\ 17 chr5:177607243-177607452 3.89e-07 11_[-3(2.18e-11)]_60 chr4:76994116-76994325 2.92e-02 100 chr15:92661485-92661694 3.53e-05 13_[-3(5.03e-05)]_19_[-1(3.69e-07)]_\ 24 chr4:5201023-5201232 2.28e-02 16_[-1(7.43e-05)]_69 chr6:78901892-78902101 6.43e-03 78_[+1(1.95e-06)]_7 chr16:24330437-24330646 6.85e-01 100 chr7:89853632-89853841 1.63e-02 25_[-1(1.60e-05)]_60 chr5:108022457-108022666 2.66e-09 12_[+1(6.85e-05)]_7_[+1(2.62e-05)]_\ 19_[+2(3.30e-11)]_2 chr1:178252633-178252842 9.43e-01 100 chr6:138519638-138519847 1.24e-04 52_[+1(6.76e-08)]_33 chr4:69138701-69138910 1.98e-04 65_[-1(1.50e-06)]_20 chr5:123996516-123996725 8.53e-01 100 chr1:73013155-73013364 8.99e-03 27_[-1(8.05e-05)]_58 chr5:74112826-74113035 4.00e-03 30_[-1(2.62e-05)]_55 chr15:53037560-53037769 7.91e-01 100 chr2:157487630-157487839 7.78e-01 100 chr4:113021192-113021401 6.62e-02 100 chr7:70938182-70938391 9.30e-01 100 chr4:141479293-141479502 1.50e-01 100 chr1:237402700-237402909 6.62e-04 51_[+1(1.71e-06)]_34 chr11:63299769-63299978 6.62e-01 100 chr14:67911157-67911366 1.99e-15 33_[+3(1.05e-16)]_4_[+1(1.50e-06)]_\ 19 chr6:31588245-31588454 4.83e-01 100 chr5:88999679-88999888 2.84e-01 100 chr1:202662204-202662413 1.14e-03 71_[+3(3.33e-05)] chr10:22242532-22242741 1.87e-03 66_[+1(1.50e-06)]_19 chr8:41981382-41981591 3.20e-16 12_[+2(4.60e-07)]_4_[-3(3.47e-14)]_\ 25 chr2:177610764-177610973 3.27e-02 5_[+1(3.16e-05)]_80 chr4:110224022-110224231 4.89e-02 100 chr2:55361286-55361495 9.66e-01 100 chr2:157487379-157487588 9.94e-01 100 chr19:4769635-4769844 7.05e-01 100 chr7:145812757-145812966 7.91e-01 100 chr3:155080783-155080992 5.39e-03 19_[+1(8.05e-05)]_5_[-2(6.25e-05)]_\ 31 chr18:9643543-9643752 3.84e-03 33_[-1(1.71e-06)]_52 chr14:73592495-73592704 2.44e-02 100 chr2:62582322-62582531 5.89e-04 34_[+1(5.38e-06)]_51 chr2:55361007-55361216 2.64e-02 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: surya.stanford.edu ********************************************************************************