Invoking:
  getsize chipseq_overlap/chipseq.overlap.optimal_peak.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.13552
Invoking:
  fasta-most -min 50 < chipseq_overlap/chipseq.overlap.optimal_peak.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.32903
Invoking:
  fasta-center -dna -len 100 < chipseq_overlap/chipseq.overlap.optimal_peak.fa 1> chipseq_overlap/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.472366
Invoking:
  fasta-shuffle-letters chipseq_overlap/seqs-centered chipseq_overlap/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.24632
Invoking:
  fasta-subsample chipseq_overlap/seqs-centered 600 -rest chipseq_overlap/seqs-discarded -seed 1 1> chipseq_overlap/seqs-sampled
Finished invoke:
  name: sample_seqs  status: 0  time: 0.510158
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/background
Finished invoke:
  name: bg  status: 0  time: 0.085314
Invoking:
  meme chipseq_overlap/seqs-sampled -oc chipseq_overlap/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile chipseq_overlap/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 802.614934
Invoking:
  dreme -v 1 -oc chipseq_overlap/dreme_out -png -dna -p chipseq_overlap/seqs-centered -n chipseq_overlap/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 5581.186266
Invoking:
  centrimo -seqlen 210 -verbosity 1 -oc chipseq_overlap/centrimo_out -bfile chipseq_overlap/background chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: centrimo  status: 0  time: 5.500606
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 chipseq_overlap/combined.meme chipseq_overlap/combined.meme 1> chipseq_overlap/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 0.909065
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_1 -bgfile chipseq_overlap/background -primary ATGYANAT chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo1  status: 0  time: 0.395712
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_2 -bgfile chipseq_overlap/background -primary MATRACAA chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo2  status: 0  time: 0.401259
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_3 -bgfile chipseq_overlap/background -primary CTGKGD chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo3  status: 0  time: 0.426566
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_4 -bgfile chipseq_overlap/background -primary RGAAA chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo4  status: 0  time: 0.385125
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_5 -bgfile chipseq_overlap/background -primary TATTYW chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo5  status: 0  time: 0.505403
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_6 -bgfile chipseq_overlap/background -primary CDGSAG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo6  status: 0  time: 0.517952
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_7 -bgfile chipseq_overlap/background -primary CBCCWCCC chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo7  status: 0  time: 0.404165
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_8 -bgfile chipseq_overlap/background -primary CCCKBCCCCCCCYBBCHCCBCCCVSSCCS chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/meme_out/meme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo8  status: 0  time: 0.460359
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_9 -bgfile chipseq_overlap/background -primary RAATGY chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo9  status: 0  time: 0.417208
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_10 -bgfile chipseq_overlap/background -primary ACARAGV chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo10  status: 0  time: 0.418962
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_11 -bgfile chipseq_overlap/background -primary ACGTV chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo11  status: 0  time: 0.416679
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_12 -bgfile chipseq_overlap/background -primary AAAGTGCTGGGATTACAGGCRTGAGCCAC chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/meme_out/meme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo12  status: 0  time: 0.55602
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_13 -bgfile chipseq_overlap/background -primary ACACAYAC chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo13  status: 0  time: 0.428893
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_14 -bgfile chipseq_overlap/background -primary AGRKGGCG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo14  status: 0  time: 0.376015
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_15 -bgfile chipseq_overlap/background -primary CYTCCY chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo15  status: 0  time: 0.374041
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_16 -bgfile chipseq_overlap/background -primary CAGWG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo16  status: 0  time: 0.385442
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_17 -bgfile chipseq_overlap/background -primary AAAAMAAA chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo17  status: 0  time: 0.363847
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_18 -bgfile chipseq_overlap/background -primary CATTSTC chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo18  status: 0  time: 0.389397
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_19 -bgfile chipseq_overlap/background -primary CCCGCCBC chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo19  status: 0  time: 0.480441
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_20 -bgfile chipseq_overlap/background -primary CAGCCTGG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo20  status: 0  time: 0.484634
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_21 -bgfile chipseq_overlap/background -primary CRGMCAC chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo21  status: 0  time: 0.427436
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_22 -bgfile chipseq_overlap/background -primary CDGGAA chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo22  status: 0  time: 0.402843
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_23 -bgfile chipseq_overlap/background -primary TTTAHAAA chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo23  status: 0  time: 0.38215
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_24 -bgfile chipseq_overlap/background -primary CCACCABG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo24  status: 0  time: 0.43139
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_25 -bgfile chipseq_overlap/background -primary CTGDCTTC chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo25  status: 0  time: 0.38197
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_26 -bgfile chipseq_overlap/background -primary GAGAGAGA chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo26  status: 0  time: 0.446361
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_27 -bgfile chipseq_overlap/background -primary ATAAAWG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo27  status: 0  time: 0.447529
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_28 -bgfile chipseq_overlap/background -primary ACASCTGG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo28  status: 0  time: 0.489678
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_29 -bgfile chipseq_overlap/background -primary GTCTCYAC chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo29  status: 0  time: 0.531344
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_30 -bgfile chipseq_overlap/background -primary AGCCACCG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo30  status: 0  time: 0.37849
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_31 -bgfile chipseq_overlap/background -primary CAACATRG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo31  status: 0  time: 0.37555
Invoking:
  spamo -verbosity 1 -oc chipseq_overlap/spamo_out_32 -bgfile chipseq_overlap/background -primary ACCWCGG chipseq_overlap/chipseq.overlap.optimal_peak.fa chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/meme_out/meme.xml chipseq_overlap/dreme_out/dreme.xml
Finished invoke:
  name: spamo32  status: 0  time: 0.382928
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_1 --bgfile chipseq_overlap/background --motif ATGYANAT chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo1  status: 0  time: 2.545959
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_2 --bgfile chipseq_overlap/background --motif MATRACAA chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo2  status: 0  time: 2.536508
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_3 --bgfile chipseq_overlap/background --motif CTGKGD chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo3  status: 0  time: 2.488857
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_4 --bgfile chipseq_overlap/background --motif RGAAA chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo4  status: 0  time: 2.541311
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_5 --bgfile chipseq_overlap/background --motif TATTYW chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo5  status: 0  time: 2.670294
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_6 --bgfile chipseq_overlap/background --motif CDGSAG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo6  status: 0  time: 2.429125
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_7 --bgfile chipseq_overlap/background --motif CBCCWCCC chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo7  status: 0  time: 2.581887
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_8 --bgfile chipseq_overlap/background --motif CCCKBCCCCCCCYBBCHCCBCCCVSSCCS chipseq_overlap/meme_out/meme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo8  status: 0  time: 3.297403
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_9 --bgfile chipseq_overlap/background --motif RAATGY chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo9  status: 0  time: 2.482271
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_10 --bgfile chipseq_overlap/background --motif ACARAGV chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo10  status: 0  time: 2.568834
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_11 --bgfile chipseq_overlap/background --motif ACGTV chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo11  status: 0  time: 2.672837
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_12 --bgfile chipseq_overlap/background --motif AAAGTGCTGGGATTACAGGCRTGAGCCAC chipseq_overlap/meme_out/meme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo12  status: 0  time: 3.090419
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_13 --bgfile chipseq_overlap/background --motif ACACAYAC chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo13  status: 0  time: 2.678502
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_14 --bgfile chipseq_overlap/background --motif AGRKGGCG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo14  status: 0  time: 2.885829
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_15 --bgfile chipseq_overlap/background --motif CYTCCY chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo15  status: 0  time: 2.411789
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_16 --bgfile chipseq_overlap/background --motif CAGWG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo16  status: 0  time: 2.818787
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_17 --bgfile chipseq_overlap/background --motif AAAAMAAA chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo17  status: 0  time: 2.656056
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_18 --bgfile chipseq_overlap/background --motif CATTSTC chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo18  status: 0  time: 2.674966
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_19 --bgfile chipseq_overlap/background --motif CCCGCCBC chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo19  status: 0  time: 2.562702
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_20 --bgfile chipseq_overlap/background --motif CAGCCTGG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo20  status: 0  time: 2.520896
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_21 --bgfile chipseq_overlap/background --motif CRGMCAC chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo21  status: 0  time: 2.733596
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_22 --bgfile chipseq_overlap/background --motif CDGGAA chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo22  status: 0  time: 2.451683
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_23 --bgfile chipseq_overlap/background --motif TTTAHAAA chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo23  status: 0  time: 2.672453
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_24 --bgfile chipseq_overlap/background --motif CCACCABG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo24  status: 0  time: 2.652211
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_25 --bgfile chipseq_overlap/background --motif CTGDCTTC chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo25  status: 0  time: 2.498514
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_26 --bgfile chipseq_overlap/background --motif GAGAGAGA chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo26  status: 0  time: 2.60328
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_27 --bgfile chipseq_overlap/background --motif ATAAAWG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo27  status: 0  time: 2.482715
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_28 --bgfile chipseq_overlap/background --motif ACASCTGG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo28  status: 0  time: 2.659101
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_29 --bgfile chipseq_overlap/background --motif GTCTCYAC chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo29  status: 0  time: 2.507944
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_30 --bgfile chipseq_overlap/background --motif AGCCACCG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo30  status: 0  time: 2.618312
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_31 --bgfile chipseq_overlap/background --motif CAACATRG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo31  status: 0  time: 2.733465
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc chipseq_overlap/fimo_out_32 --bgfile chipseq_overlap/background --motif ACCWCGG chipseq_overlap/dreme_out/dreme.xml chipseq_overlap/chipseq.overlap.optimal_peak.fa
Finished invoke:
  name: fimo32  status: 0  time: 2.517807
Writing output
Invoking:
  meme-chip_html_to_tsv chipseq_overlap/meme-chip.html chipseq_overlap/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.269569
Done