Invoking:
  getsize intersect_memechip_out/intersect.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.170092
Invoking:
  fasta-most -min 50 < intersect_memechip_out/intersect.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.382004
Invoking:
  fasta-center -dna -len 100 < intersect_memechip_out/intersect.fa 1> intersect_memechip_out/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.592291
Invoking:
  fasta-shuffle-letters intersect_memechip_out/seqs-centered intersect_memechip_out/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.260686
Invoking:
  fasta-subsample intersect_memechip_out/seqs-centered 600 -rest intersect_memechip_out/seqs-discarded -seed 1 1> intersect_memechip_out/seqs-sampled
Finished invoke:
  name: sample_seqs  status: 0  time: 0.541549
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 intersect_memechip_out/intersect.fa intersect_memechip_out/background
Finished invoke:
  name: bg  status: 0  time: 0.199667
Invoking:
  meme intersect_memechip_out/seqs-sampled -oc intersect_memechip_out/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile intersect_memechip_out/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 754.131795
Invoking:
  dreme -v 1 -oc intersect_memechip_out/dreme_out -png -dna -p intersect_memechip_out/seqs-centered -n intersect_memechip_out/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 6994.429826
Invoking:
  centrimo -seqlen 220 -verbosity 1 -oc intersect_memechip_out/centrimo_out -bfile intersect_memechip_out/background intersect_memechip_out/intersect.fa intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: centrimo  status: 0  time: 5.42001
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 intersect_memechip_out/combined.meme intersect_memechip_out/combined.meme 1> intersect_memechip_out/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 0.34255
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_1 -bgfile intersect_memechip_out/background -primary CCASYAGRKGGCRS intersect_memechip_out/intersect.fa intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo1  status: 0  time: 0.874533
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_2 -bgfile intersect_memechip_out/background -primary BGTGGY intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo2  status: 0  time: 0.665239
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_3 -bgfile intersect_memechip_out/background -primary GAKGGYGC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo3  status: 0  time: 0.580618
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_4 -bgfile intersect_memechip_out/background -primary GCGCCBCC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo4  status: 0  time: 0.656807
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_5 -bgfile intersect_memechip_out/background -primary GTGGHCA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo5  status: 0  time: 0.589546
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_6 -bgfile intersect_memechip_out/background -primary CTCTGCWG intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo6  status: 0  time: 0.651771
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_7 -bgfile intersect_memechip_out/background -primary DTTTCY intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo7  status: 0  time: 0.679262
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_8 -bgfile intersect_memechip_out/background -primary CTGYAGK intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo8  status: 0  time: 0.598249
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_9 -bgfile intersect_memechip_out/background -primary CCACTGGR intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo9  status: 0  time: 0.546501
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_10 -bgfile intersect_memechip_out/background -primary GSTGCTGY intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo10  status: 0  time: 0.565137
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_11 -bgfile intersect_memechip_out/background -primary ATTHY intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo11  status: 0  time: 0.597577
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_12 -bgfile intersect_memechip_out/background -primary GTCRCTGY intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo12  status: 0  time: 0.62114
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_13 -bgfile intersect_memechip_out/background -primary CKBCCTCC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo13  status: 0  time: 0.525017
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_14 -bgfile intersect_memechip_out/background -primary RGRAA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo14  status: 0  time: 0.631459
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_15 -bgfile intersect_memechip_out/background -primary GCAGTWCC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo15  status: 0  time: 0.639732
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_16 -bgfile intersect_memechip_out/background -primary CCGCTAGA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo16  status: 0  time: 0.587049
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_17 -bgfile intersect_memechip_out/background -primary RAACWGCA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo17  status: 0  time: 0.602303
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_18 -bgfile intersect_memechip_out/background -primary RGWGACA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo18  status: 0  time: 0.562799
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_19 -bgfile intersect_memechip_out/background -primary GCRGCCRC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo19  status: 0  time: 0.611425
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_20 -bgfile intersect_memechip_out/background -primary AGAGGCCA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo20  status: 0  time: 0.726777
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_21 -bgfile intersect_memechip_out/background -primary GGACRC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo21  status: 0  time: 0.714848
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_22 -bgfile intersect_memechip_out/background -primary ACTGACA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo22  status: 0  time: 0.531933
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_23 -bgfile intersect_memechip_out/background -primary ATTTAH intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo23  status: 0  time: 0.629753
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_24 -bgfile intersect_memechip_out/background -primary AAAAMAAA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo24  status: 0  time: 0.624465
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_25 -bgfile intersect_memechip_out/background -primary CCCCGCCC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo25  status: 0  time: 0.595585
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_26 -bgfile intersect_memechip_out/background -primary AAATAH intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo26  status: 0  time: 0.57392
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_27 -bgfile intersect_memechip_out/background -primary TTTTAWA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo27  status: 0  time: 0.623514
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_28 -bgfile intersect_memechip_out/background -primary GWAAACA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo28  status: 0  time: 0.576066
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_29 -bgfile intersect_memechip_out/background -primary CGTBTTC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo29  status: 0  time: 0.650646
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_30 -bgfile intersect_memechip_out/background -primary ACASACAC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo30  status: 0  time: 0.603451
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_31 -bgfile intersect_memechip_out/background -primary ATCACMGC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo31  status: 0  time: 0.604864
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_32 -bgfile intersect_memechip_out/background -primary GTAACA intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo32  status: 0  time: 0.514805
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_33 -bgfile intersect_memechip_out/background -primary CDCTTCC intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo33  status: 0  time: 0.619921
Invoking:
  spamo -verbosity 1 -oc intersect_memechip_out/spamo_out_34 -bgfile intersect_memechip_out/background -primary CACGTK intersect_memechip_out/intersect.fa intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/dreme_out/dreme.xml
Finished invoke:
  name: spamo34  status: 0  time: 0.606325
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_1 --bgfile intersect_memechip_out/background --motif CCASYAGRKGGCRS intersect_memechip_out/meme_out/meme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo1  status: 0  time: 3.165468
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_2 --bgfile intersect_memechip_out/background --motif BGTGGY intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo2  status: 0  time: 2.693282
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_3 --bgfile intersect_memechip_out/background --motif GAKGGYGC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo3  status: 0  time: 2.829244
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_4 --bgfile intersect_memechip_out/background --motif GCGCCBCC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo4  status: 0  time: 2.848942
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_5 --bgfile intersect_memechip_out/background --motif GTGGHCA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo5  status: 0  time: 2.836579
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_6 --bgfile intersect_memechip_out/background --motif CTCTGCWG intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo6  status: 0  time: 2.786611
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_7 --bgfile intersect_memechip_out/background --motif DTTTCY intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo7  status: 0  time: 2.664779
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_8 --bgfile intersect_memechip_out/background --motif CTGYAGK intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo8  status: 0  time: 2.927455
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_9 --bgfile intersect_memechip_out/background --motif CCACTGGR intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo9  status: 0  time: 3.018474
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_10 --bgfile intersect_memechip_out/background --motif GSTGCTGY intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo10  status: 0  time: 2.655342
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_11 --bgfile intersect_memechip_out/background --motif ATTHY intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo11  status: 0  time: 2.67415
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_12 --bgfile intersect_memechip_out/background --motif GTCRCTGY intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo12  status: 0  time: 2.888537
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_13 --bgfile intersect_memechip_out/background --motif CKBCCTCC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo13  status: 0  time: 3.204711
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_14 --bgfile intersect_memechip_out/background --motif RGRAA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo14  status: 0  time: 2.715586
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_15 --bgfile intersect_memechip_out/background --motif GCAGTWCC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo15  status: 0  time: 2.567216
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_16 --bgfile intersect_memechip_out/background --motif CCGCTAGA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo16  status: 0  time: 2.884533
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_17 --bgfile intersect_memechip_out/background --motif RAACWGCA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo17  status: 0  time: 2.883365
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_18 --bgfile intersect_memechip_out/background --motif RGWGACA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo18  status: 0  time: 2.928948
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_19 --bgfile intersect_memechip_out/background --motif GCRGCCRC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo19  status: 0  time: 2.96261
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_20 --bgfile intersect_memechip_out/background --motif AGAGGCCA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo20  status: 0  time: 2.762927
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_21 --bgfile intersect_memechip_out/background --motif GGACRC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo21  status: 0  time: 2.719567
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_22 --bgfile intersect_memechip_out/background --motif ACTGACA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo22  status: 0  time: 2.8488
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_23 --bgfile intersect_memechip_out/background --motif ATTTAH intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo23  status: 0  time: 3.000723
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_24 --bgfile intersect_memechip_out/background --motif AAAAMAAA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo24  status: 0  time: 2.852884
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_25 --bgfile intersect_memechip_out/background --motif CCCCGCCC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo25  status: 0  time: 2.680127
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_26 --bgfile intersect_memechip_out/background --motif AAATAH intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo26  status: 0  time: 2.646104
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_27 --bgfile intersect_memechip_out/background --motif TTTTAWA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo27  status: 0  time: 2.915675
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_28 --bgfile intersect_memechip_out/background --motif GWAAACA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo28  status: 0  time: 2.83219
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_29 --bgfile intersect_memechip_out/background --motif CGTBTTC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo29  status: 0  time: 2.461135
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_30 --bgfile intersect_memechip_out/background --motif ACASACAC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo30  status: 0  time: 2.968769
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_31 --bgfile intersect_memechip_out/background --motif ATCACMGC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo31  status: 0  time: 2.615093
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_32 --bgfile intersect_memechip_out/background --motif GTAACA intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo32  status: 0  time: 2.734428
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_33 --bgfile intersect_memechip_out/background --motif CDCTTCC intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo33  status: 0  time: 3.132624
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc intersect_memechip_out/fimo_out_34 --bgfile intersect_memechip_out/background --motif CACGTK intersect_memechip_out/dreme_out/dreme.xml intersect_memechip_out/intersect.fa
Finished invoke:
  name: fimo34  status: 0  time: 2.706397
Writing output
Invoking:
  meme-chip_html_to_tsv intersect_memechip_out/meme-chip.html intersect_memechip_out/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.234908
Done