Invoking: getsize seqnotcut_memechip_out/idr.seqnotcut.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.126509 Invoking: fasta-most -min 50 < seqnotcut_memechip_out/idr.seqnotcut.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.381305 Invoking: fasta-center -dna -len 100 < seqnotcut_memechip_out/idr.seqnotcut.fa 1> seqnotcut_memechip_out/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.452653 Invoking: fasta-shuffle-letters seqnotcut_memechip_out/seqs-centered seqnotcut_memechip_out/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.254372 Invoking: fasta-subsample seqnotcut_memechip_out/seqs-centered 600 -rest seqnotcut_memechip_out/seqs-discarded -seed 1 1> seqnotcut_memechip_out/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.430791 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/background Finished invoke: name: bg status: 0 time: 0.078449 Invoking: meme seqnotcut_memechip_out/seqs-sampled -oc seqnotcut_memechip_out/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile seqnotcut_memechip_out/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 802.33278 Invoking: dreme -v 1 -oc seqnotcut_memechip_out/dreme_out -png -dna -p seqnotcut_memechip_out/seqs-centered -n seqnotcut_memechip_out/seqs-shuffled Finished invoke: name: dreme status: 0 time: 4386.0546 Invoking: centrimo -seqlen 220 -verbosity 1 -oc seqnotcut_memechip_out/centrimo_out -bfile seqnotcut_memechip_out/background seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 4.770037 Invoking: tomtom -verbosity 1 -text -thresh 0.1 seqnotcut_memechip_out/combined.meme seqnotcut_memechip_out/combined.meme 1> seqnotcut_memechip_out/motif_alignment.txt Finished invoke: name: align status: 0 time: 1.050337 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_1 -bgfile seqnotcut_memechip_out/background -primary SYGCCMYCTRSWGGY seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.884493 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_2 -bgfile seqnotcut_memechip_out/background -primary AGCGCCYC seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.452466 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_3 -bgfile seqnotcut_memechip_out/background -primary CTGCCMTC seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.471222 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_4 -bgfile seqnotcut_memechip_out/background -primary CRCCRCC seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.537035 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_5 -bgfile seqnotcut_memechip_out/background -primary CAGMAGAG seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.492793 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_6 -bgfile seqnotcut_memechip_out/background -primary CTACTGVC seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.434388 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_7 -bgfile seqnotcut_memechip_out/background -primary CTGYAG seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.481244 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_8 -bgfile seqnotcut_memechip_out/background -primary RKAAA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.50754 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_9 -bgfile seqnotcut_memechip_out/background -primary CCACAHGG seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.542687 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_10 -bgfile seqnotcut_memechip_out/background -primary ACAGCRVC seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.452043 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_11 -bgfile seqnotcut_memechip_out/background -primary CWGTGGY seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.674693 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_12 -bgfile seqnotcut_memechip_out/background -primary CCGCYAGG seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.455109 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_13 -bgfile seqnotcut_memechip_out/background -primary CGCCCCCA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.523204 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_14 -bgfile seqnotcut_memechip_out/background -primary ATTYY seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.481053 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_15 -bgfile seqnotcut_memechip_out/background -primary RGGAA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.467542 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_16 -bgfile seqnotcut_memechip_out/background -primary GGCCTCTA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.467762 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_17 -bgfile seqnotcut_memechip_out/background -primary GGWGACA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.551665 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_18 -bgfile seqnotcut_memechip_out/background -primary ACGT seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.425751 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_19 -bgfile seqnotcut_memechip_out/background -primary AAAMAAAA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo19 status: 0 time: 0.438602 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_20 -bgfile seqnotcut_memechip_out/background -primary AMACACAS seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo20 status: 0 time: 0.478175 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_21 -bgfile seqnotcut_memechip_out/background -primary STGTCAGCWRGAAGCMGTYA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo21 status: 0 time: 0.634895 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_22 -bgfile seqnotcut_memechip_out/background -primary RTTAMA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo22 status: 0 time: 0.633751 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_23 -bgfile seqnotcut_memechip_out/background -primary GARRACA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo23 status: 0 time: 0.474758 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_24 -bgfile seqnotcut_memechip_out/background -primary AAATAY seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo24 status: 0 time: 0.460937 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_25 -bgfile seqnotcut_memechip_out/background -primary GTGASAAC seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo25 status: 0 time: 0.546316 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_26 -bgfile seqnotcut_memechip_out/background -primary GAAGGTGR seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo26 status: 0 time: 0.63922 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_27 -bgfile seqnotcut_memechip_out/background -primary CAGCBTCC seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo27 status: 0 time: 0.521604 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_28 -bgfile seqnotcut_memechip_out/background -primary AGACATTK seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo28 status: 0 time: 0.468372 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_29 -bgfile seqnotcut_memechip_out/background -primary GGCSGGGA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo29 status: 0 time: 0.464907 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_30 -bgfile seqnotcut_memechip_out/background -primary ATBRCTTGAACCTGGGARGYANARGTTGCA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo30 status: 0 time: 0.686787 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_31 -bgfile seqnotcut_memechip_out/background -primary GGAAGCCA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo31 status: 0 time: 0.528364 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_32 -bgfile seqnotcut_memechip_out/background -primary ATGTGGY seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo32 status: 0 time: 0.500388 Invoking: spamo -verbosity 1 -oc seqnotcut_memechip_out/spamo_out_33 -bgfile seqnotcut_memechip_out/background -primary KTTTAAA seqnotcut_memechip_out/idr.seqnotcut.fa seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/dreme_out/dreme.xml Finished invoke: name: spamo33 status: 0 time: 0.439263 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_1 --bgfile seqnotcut_memechip_out/background --motif SYGCCMYCTRSWGGY seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo1 status: 0 time: 2.96885 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_2 --bgfile seqnotcut_memechip_out/background --motif AGCGCCYC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo2 status: 0 time: 2.413556 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_3 --bgfile seqnotcut_memechip_out/background --motif CTGCCMTC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo3 status: 0 time: 2.395693 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_4 --bgfile seqnotcut_memechip_out/background --motif CRCCRCC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo4 status: 0 time: 2.163079 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_5 --bgfile seqnotcut_memechip_out/background --motif CAGMAGAG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo5 status: 0 time: 2.290195 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_6 --bgfile seqnotcut_memechip_out/background --motif CTACTGVC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo6 status: 0 time: 2.126519 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_7 --bgfile seqnotcut_memechip_out/background --motif CTGYAG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo7 status: 0 time: 2.157363 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_8 --bgfile seqnotcut_memechip_out/background --motif RKAAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo8 status: 0 time: 2.086965 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_9 --bgfile seqnotcut_memechip_out/background --motif CCACAHGG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo9 status: 0 time: 2.370422 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_10 --bgfile seqnotcut_memechip_out/background --motif ACAGCRVC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo10 status: 0 time: 2.188866 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_11 --bgfile seqnotcut_memechip_out/background --motif CWGTGGY seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo11 status: 0 time: 2.425994 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_12 --bgfile seqnotcut_memechip_out/background --motif CCGCYAGG seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo12 status: 0 time: 2.163572 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_13 --bgfile seqnotcut_memechip_out/background --motif CGCCCCCA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo13 status: 0 time: 2.136969 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_14 --bgfile seqnotcut_memechip_out/background --motif ATTYY seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo14 status: 0 time: 2.26988 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_15 --bgfile seqnotcut_memechip_out/background --motif RGGAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo15 status: 0 time: 2.413887 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_16 --bgfile seqnotcut_memechip_out/background --motif GGCCTCTA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo16 status: 0 time: 2.139898 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_17 --bgfile seqnotcut_memechip_out/background --motif GGWGACA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo17 status: 0 time: 2.202095 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_18 --bgfile seqnotcut_memechip_out/background --motif ACGT seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo18 status: 0 time: 2.31277 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_19 --bgfile seqnotcut_memechip_out/background --motif AAAMAAAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo19 status: 0 time: 2.405094 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_20 --bgfile seqnotcut_memechip_out/background --motif AMACACAS seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo20 status: 0 time: 2.293983 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_21 --bgfile seqnotcut_memechip_out/background --motif STGTCAGCWRGAAGCMGTYA seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo21 status: 0 time: 2.375384 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_22 --bgfile seqnotcut_memechip_out/background --motif RTTAMA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo22 status: 0 time: 2.160687 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_23 --bgfile seqnotcut_memechip_out/background --motif GARRACA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo23 status: 0 time: 2.388082 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_24 --bgfile seqnotcut_memechip_out/background --motif AAATAY seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo24 status: 0 time: 2.131636 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_25 --bgfile seqnotcut_memechip_out/background --motif GTGASAAC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo25 status: 0 time: 2.27672 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_26 --bgfile seqnotcut_memechip_out/background --motif GAAGGTGR seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo26 status: 0 time: 2.173031 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_27 --bgfile seqnotcut_memechip_out/background --motif CAGCBTCC seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo27 status: 0 time: 2.163392 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_28 --bgfile seqnotcut_memechip_out/background --motif AGACATTK seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo28 status: 0 time: 2.304187 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_29 --bgfile seqnotcut_memechip_out/background --motif GGCSGGGA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo29 status: 0 time: 2.370093 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_30 --bgfile seqnotcut_memechip_out/background --motif ATBRCTTGAACCTGGGARGYANARGTTGCA seqnotcut_memechip_out/meme_out/meme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo30 status: 0 time: 2.512627 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_31 --bgfile seqnotcut_memechip_out/background --motif GGAAGCCA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo31 status: 0 time: 2.120919 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_32 --bgfile seqnotcut_memechip_out/background --motif ATGTGGY seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo32 status: 0 time: 2.257519 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_33 --bgfile seqnotcut_memechip_out/background --motif KTTTAAA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa Finished invoke: name: fimo33 status: 0 time: 2.213213 Writing output Invoking: meme-chip_html_to_tsv seqnotcut_memechip_out/meme-chip.html seqnotcut_memechip_out/summary.tsv Finished invoke: name: summary status: 0 time: 0.185962 Done