Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE seqnotcut_memechip_out/idr.seqnotcut.fa
Database contains 26985 sequences, 5867047 residues

MOTIFS seqnotcut_memechip_out/dreme_out/dreme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
AGRDGGCR 8 AGGGGGCA
CCASYAGR 8 CCACCAGG
GCKCCMYC 8 GCTCCCCC
RKAAA 5 AGAAA
CCTSYAG 7 CCTCCAG
CYGCCNCC 8 CTGCCCCC
ATTYY 5 ATTCT
CRBCTCC 7 CAGCTCC
RGGAA 5 GGGAA
CCACAHGG 8 CCACAAGG
ACAGCRVC 8 ACAGCAGC
CTACTGVC 8 CTACTGGC
GGWGACA 7 GGAGACA
ACGT 4 ACGT
AAAMAAAA 8 AAAAAAAA
CRCCRCC 7 CACCACC
AMACACAS 8 ACACACAC
CTGYAG 6 CTGCAG
AGRGGTCR 8 AGGGGTCA
RTTAMA 6 GTTACA
CWGTGGY 7 CTGTGGC
GCAGCAKC 8 GCAGCAGC
GARRACA 7 GAGGACA
CCGCYAGG 8 CCGCCAGG
AAATAY 6 AAATAC
GTGASAAC 8 GTGACAAC
CTGCCMTC 8 CTGCCCTC
GAAGGTGR 8 GAAGGTGG
CAGCBTCC 8 CAGCCTCC
CGCCCCCA 8 CGCCCCCA
AGACATTK 8 AGACATTG
GGCSGGGA 8 GGCCGGGA
CAGMAGAG 8 CAGCAGAG
GGCCTCTA 8 GGCCTCTA
GGAAGCCA 8 GGAAGCCA
ATGTGGY 7 ATGTGGC
AGCGCCYC 8 AGCGCCCC
KTTTAAA 7 TTTTAAA

Random model letter frequencies (seqnotcut_memechip_out/background):
A 0.227 C 0.273 G 0.273 T 0.227


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
GGCCTCTA DREME-34 chr7 - 88361 88368 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 + 853953 853960 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 + 1263482 1263489 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 1401615 1401622 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 1671978 1671985 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 1969303 1969310 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 + 2067085 2067092 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 - 2601911 2601918 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 2780669 2780676 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 3587688 3587695 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 4143173 4143180 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 4269019 4269026 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 + 4337707 4337714 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 4837758 4837765 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 - 5131324 5131331 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 5132527 5132534 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr1 + 5159885 5159892 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 5518292 5518299 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr7 + 5867529 5867536 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 6031191 6031198 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 6171252 6171259 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chrY - 6679902 6679909 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 - 7273763 7273770 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 7973133 7973140 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 + 8192573 8192580 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 8463171 8463178 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 - 9095869 9095876 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 10188491 10188498 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 10376536 10376543 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 11412389 11412396 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 11677513 11677520 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 12401502 12401509 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr19 + 12844332 12844339 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr7 - 13086877 13086884 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 - 13516776 13516783 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 13602305 13602312 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chrX - 13709175 13709182 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr16 + 14404604 14404611 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 - 14577029 14577036 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 14730393 14730400 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 + 15047285 15047292 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 15102444 15102451 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 - 15198426 15198433 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr21 + 15454620 15454627 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 - 15848631 15848638 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr16 + 15859895 15859902 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr11 + 15959292 15959299 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 16453923 16453930 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 - 16935955 16935962 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 17036769 17036776 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr16 - 17090894 17090901 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 17549770 17549777 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr16 + 17561898 17561905 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 17791715 17791722 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 17808533 17808540 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr21 - 18364964 18364971 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 + 18399165 18399172 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr18 + 19325327 19325334 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr20 - 19490052 19490059 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 - 19641313 19641320 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr22 + 19900308 19900315 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr18 + 19904591 19904598 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 20336195 20336202 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr22 - 20793612 20793619 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 - 20882182 20882189 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr14 + 21271584 21271591 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 21588990 21588997 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr20 + 21813245 21813252 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr22 + 22026522 22026529 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 - 22660111 22660118 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 23332952 23332959 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 + 23683310 23683317 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 + 23742303 23742310 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 + 24921522 24921529 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 + 25104730 25104737 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr18 + 25129512 25129519 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr13 - 25290209 25290216 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 + 25788990 25788997 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr17 + 25861596 25861603 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr6 + 26018152 26018159 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 - 26446875 26446882 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr22 + 26962941 26962948 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr7 + 27138213 27138220 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 27203043 27203050 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 + 27588188 27588195 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr10 - 28591650 28591657 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 - 28945159 28945166 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 29172900 29172907 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr8 - 29205309 29205316 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 29218448 29218455 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr18 + 29261321 29261328 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 - 29739384 29739391 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr16 - 29828683 29828690 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 29835023 29835030 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 - 29972422 29972429 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 - 30023308 30023315 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX - 30079044 30079051 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 30679715 30679722 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 30883355 30883362 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 31093036 31093043 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 31276880 31276887 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr12 + 31399184 31399191 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr14 - 34608437 34608444 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr18 - 35082837 35082844 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 + 35293398 35293405 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 35342532 35342539 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 - 35346289 35346296 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 35486048 35486055 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr19 + 35707868 35707875 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 36683525 36683532 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr17 - 36718212 36718219 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 - 36778230 36778237 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 36939654 36939661 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 37021319 37021326 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr5 + 37043965 37043972 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr17 + 37126576 37126583 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr1 + 37134812 37134819 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 + 37172815 37172822 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 - 37487954 37487961 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr21 + 37542254 37542261 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 - 37795384 37795391 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 37800917 37800924 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 - 38460949 38460956 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr21 + 38832748 38832755 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 39138077 39138084 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 - 39235412 39235419 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 39369597 39369604 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 39679439 39679446 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr21 + 39883762 39883769 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr1 - 39973104 39973111 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 - 40740363 40740370 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX - 40869830 40869837 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 - 41025484 41025491 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 - 41207360 41207367 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 42599579 42599586 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 - 42614352 42614359 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 42940945 42940952 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 43787445 43787452 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 - 44104045 44104052 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 - 45569275 45569282 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 45682252 45682259 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 46148845 46148852 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr11 - 46148851 46148858 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 - 46194156 46194163 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 46392096 46392103 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 47104041 47104048 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr16 + 47239188 47239195 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr11 - 47370678 47370685 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 47590087 47590094 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr22 - 48109677 48109684 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 + 48141925 48141932 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 - 48410854 48410861 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 + 48568425 48568432 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 48680902 48680909 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX - 48684692 48684699 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 48796816 48796823 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 50393696 50393703 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr22 + 50497687 50497694 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr22 - 50895406 50895413 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 50951238 50951245 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr19 + 51297750 51297757 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 + 51579113 51579120 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 51929164 51929171 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr14 + 52205711 52205718 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 + 52370792 52370799 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 + 53073679 53073686 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr20 - 53073692 53073699 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr14 + 54970394 54970401 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr14 - 54970407 54970414 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 54976540 54976547 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 + 55086736 55086743 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr5 - 55216800 55216807 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 + 55964656 55964663 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 + 56074036 56074043 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr3 - 56123977 56123984 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 56275770 56275777 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr16 - 56345412 56345419 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 56542514 56542521 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 56753199 56753206 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 59042518 59042525 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 - 60033723 60033730 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 + 60717079 60717086 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr14 + 61188521 61188528 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 61530877 61530884 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr20 + 61557795 61557802 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 62015951 62015958 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 62040625 62040632 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 - 62352790 62352797 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 62650106 62650113 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr7 + 64407345 64407352 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr14 + 64686941 64686948 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 66160550 66160557 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 66798865 66798872 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 - 66862613 66862620 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 67033615 67033622 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr15 - 67714836 67714843 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 + 68369195 68369202 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr12 + 69678179 69678186 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX - 70199446 70199453 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 - 70748578 70748585 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr14 + 70865641 70865648 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr16 - 71249007 71249014 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 - 71765121 71765128 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 - 71859210 71859217 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 71893017 71893024 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr18 - 71998847 71998854 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 72005973 72005980 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr14 + 72019698 72019705 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr12 - 72676703 72676710 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 + 73193814 73193821 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr10 - 73261238 73261245 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 73393896 73393903 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 - 73521435 73521442 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 73738497 73738504 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 - 73897080 73897087 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 - 74050368 74050375 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 74135485 74135492 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr16 - 74802418 74802425 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 74832973 74832980 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr14 + 75373906 75373913 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 - 75702848 75702855 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 75874020 75874027 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 - 76214756 76214763 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 76408622 76408629 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 + 76720601 76720608 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr17 + 76787748 76787755 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr17 - 77176623 77176630 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr18 + 77694687 77694694 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 78056779 78056786 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 - 78222871 78222878 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 78662770 78662777 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 - 78953711 78953718 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 + 80061665 80061672 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr8 - 80647570 80647577 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 + 80988815 80988822 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr15 - 81468953 81468960 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 - 81750603 81750610 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 82044669 82044676 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr14 + 82700420 82700427 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr10 + 83844852 83844859 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 - 84642764 84642771 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 84689973 84689980 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr16 + 84930672 84930679 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr16 - 85452876 85452883 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 86061975 86061982 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr4 - 86885669 86885676 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 87195165 87195172 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr16 + 87781502 87781509 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 88064251 88064258 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 - 89471386 89471393 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 90466682 90466689 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr1 + 91317212 91317219 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 + 91486686 91486693 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 + 91612338 91612345 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr10 + 94456493 94456500 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 - 94495607 94495614 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 95178914 95178921 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 - 95974670 95974677 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 + 96143128 96143135 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr12 - 96357123 96357130 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 98818267 98818274 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 + 99066676 99066683 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr8 - 99142506 99142513 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX - 99704879 99704886 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 + 100937949 100937956 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 101049295 101049302 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 + 101517674 101517681 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 - 101609444 101609451 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr15 + 101897634 101897641 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 - 102088535 102088542 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 102367576 102367583 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 - 103420192 103420199 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 + 104227851 104227858 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr12 - 104227857 104227864 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 106372491 106372498 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr10 - 106537383 106537390 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 + 107024634 107024641 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr6 + 107539549 107539556 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr1 - 107599669 107599676 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 - 108764038 108764045 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 + 108910918 108910925 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 108926322 108926329 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 109985407 109985414 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 - 110235936 110235943 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 110411707 110411714 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 110495691 110495698 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 111868772 111868779 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr13 - 111868808 111868815 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 - 111984213 111984220 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 + 113226203 113226210 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 113403198 113403205 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 - 114569825 114569832 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 114606150 114606157 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr12 + 115373577 115373584 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr11 + 116016166 116016173 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr9 - 117266738 117266745 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 - 117839148 117839155 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 118135187 118135194 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 - 118939641 118939648 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX - 119434007 119434014 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 119504151 119504158 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr11 - 119734952 119734959 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 + 120622470 120622477 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr12 - 120784613 120784620 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 121708942 121708949 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 122310591 122310598 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr5 + 122405206 122405213 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr3 - 123500219 123500226 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 126773030 126773037 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 + 127074715 127074722 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 127776828 127776835 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr11 - 128424162 128424169 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 - 130579343 130579350 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 - 131271078 131271085 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 + 131314776 131314783 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 131607142 131607149 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr10 + 131665362 131665369 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 132623347 132623354 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 - 132733652 132733659 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 - 132928616 132928623 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 - 133273944 133273951 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr11 + 133694649 133694656 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 134187226 134187233 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 134209953 134209960 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 135709796 135709803 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr8 + 136742668 136742675 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 - 137555782 137555789 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 138848177 138848184 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr9 - 139062311 139062318 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 + 140440646 140440653 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 140485859 140485866 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 - 141300041 141300048 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 141452922 141452929 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 + 141644177 141644184 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr8 - 141644183 141644190 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 141891990 141891997 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr3 - 141930068 141930075 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 141981213 141981220 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 143836928 143836935 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr4 + 146075906 146075913 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr6 + 146082894 146082901 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr6 + 147830275 147830282 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 - 148292315 148292322 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 + 150186260 150186267 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr7 - 150835686 150835693 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 - 151138213 151138220 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 151898159 151898166 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chrX + 152052942 152052949 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 152748092 152748099 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 152913576 152913583 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chrX + 153295037 153295044 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 - 155004135 155004142 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 155587668 155587675 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 - 156107532 156107539 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 + 157096424 157096431 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 + 157702836 157702843 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr6 - 158808307 158808314 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 158830722 158830729 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 - 164457097 164457104 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 164743770 164743777 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 165770448 165770455 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 168094192 168094199 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr5 - 168098433 168098440 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 168407133 168407140 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 169167663 169167670 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 169722887 169722894 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 169786329 169786336 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 170201365 170201372 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 + 170201475 170201482 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 - 173436777 173436784 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 174617060 174617067 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 + 175442862 175442869 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr4 - 175976394 175976401 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 176578909 176578916 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 - 177987996 177988003 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr5 + 179745702 179745709 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 183337578 183337585 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr4 + 183506555 183506562 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 + 186080427 186080434 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 188510886 188510893 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 193859624 193859631 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr3 - 194325746 194325753 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 200002699 200002706 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 203052709 203052716 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 203562964 203562971 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 204349147 204349154 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 + 207648636 207648643 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr1 - 216735935 216735942 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 218223936 218223943 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 221348111 221348118 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 226825520 226825527 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 230079952 230079959 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 233533985 233533992 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 236547548 236547555 1.77e-05 0.505 ggcctcta
GGCCTCTA DREME-34 chr2 + 239015080 239015087 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr2 + 241543893 241543900 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 + 241998255 241998262 1.77e-05 0.505 GGCCTCTA
GGCCTCTA DREME-34 chr1 - 245386423 245386430 1.77e-05 0.505 GGCCTCTA

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc seqnotcut_memechip_out/fimo_out_16 --bgfile seqnotcut_memechip_out/background --motif GGCCTCTA seqnotcut_memechip_out/dreme_out/dreme.xml seqnotcut_memechip_out/idr.seqnotcut.fa

Settings:

output_directory = seqnotcut_memechip_out/fimo_out_16 MEME file name = seqnotcut_memechip_out/dreme_out/dreme.xml sequence file name = seqnotcut_memechip_out/idr.seqnotcut.fa
background file name = seqnotcut_memechip_out/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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