******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= cutnotseq_memechip_out/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr6:145774168-145774268 1.0000 100 chr4:41218607-41218707 1.0000 100 chr9:130699519-130699619 1.0000 100 chrX:119609129-119609229 1.0000 100 chr20:38674455-38674555 1.0000 100 chr2:179261373-179261473 1.0000 100 chr12:128174704-12817480 1.0000 100 chr15:99124388-99124488 1.0000 100 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chr18:47882267-47882367 1.0000 100 chr6:116937276-116937376 1.0000 100 chr11:14435907-14436007 1.0000 100 chr20:43226738-43226838 1.0000 100 chr18:21596065-21596165 1.0000 100 chr1:202348712-202348812 1.0000 100 chrX:101013449-101013549 1.0000 100 chr15:75591252-75591352 1.0000 100 chr12:56984691-56984791 1.0000 100 chr1:22738792-22738892 1.0000 100 chr2:66503190-66503290 1.0000 100 chr17:46936528-46936628 1.0000 100 chr20:50003535-50003635 1.0000 100 chr10:116930999-11693109 1.0000 100 chr11:81280929-81281029 1.0000 100 chr2:85474348-85474448 1.0000 100 chr17:6346784-6346884 1.0000 100 chr10:63554999-63555099 1.0000 100 chr13:91730153-91730253 1.0000 100 chr6:30483751-30483851 1.0000 100 chr17:49934394-49934494 1.0000 100 chr3:103159365-103159465 1.0000 100 chr2:208637151-208637251 1.0000 100 chr5:60763496-60763596 1.0000 100 chr5:115174700-115174800 1.0000 100 chr5:131831876-131831976 1.0000 100 chr5:149821153-149821253 1.0000 100 chr11:118663368-11866346 1.0000 100 chr1:162760073-162760173 1.0000 100 chr15:74611930-74612030 1.0000 100 chr18:5885314-5885414 1.0000 100 chr11:67120586-67120686 1.0000 100 chr21:44859205-44859305 1.0000 100 chr17:74349868-74349968 1.0000 100 chr17:32008297-32008397 1.0000 100 chr5:72783605-72783705 1.0000 100 chr4:174302750-174302850 1.0000 100 chrX:18228618-18228718 1.0000 100 chr3:196244744-196244844 1.0000 100 chr13:73849343-73849443 1.0000 100 chr9:110101613-110101713 1.0000 100 chr13:60953852-60953952 1.0000 100 chr11:74853831-74853931 1.0000 100 chr11:119341733-11934183 1.0000 100 chr16:86108010-86108110 1.0000 100 chr9:140515347-140515447 1.0000 100 chr1:207158495-207158595 1.0000 100 chr9:88401148-88401248 1.0000 100 chr3:62231362-62231462 1.0000 100 chr15:78799458-78799558 1.0000 100 chr7:22989588-22989688 1.0000 100 chr11:89350128-89350228 1.0000 100 chr19:46807176-46807276 1.0000 100 chr8:102594515-102594615 1.0000 100 chr11:21289599-21289699 1.0000 100 chr18:68599020-68599120 1.0000 100 chr14:38875005-38875105 1.0000 100 chr17:66053455-66053555 1.0000 100 chr11:71503470-71503570 1.0000 100 chr1:32028253-32028353 1.0000 100 chr19:51611117-51611217 1.0000 100 chr7:149111831-149111931 1.0000 100 chr16:10837828-10837928 1.0000 100 chr12:56139205-56139305 1.0000 100 chr2:95743854-95743954 1.0000 100 chr15:40999708-40999808 1.0000 100 chr6:49420705-49420805 1.0000 100 chr1:6208587-6208687 1.0000 100 chr4:127144451-127144551 1.0000 100 chr10:31642561-31642661 1.0000 100 chr19:2456962-2457062 1.0000 100 chr14:55118868-55118968 1.0000 100 chr2:47629402-47629502 1.0000 100 chr17:48637164-48637264 1.0000 100 chr12:61078540-61078640 1.0000 100 chr19:42746712-42746812 1.0000 100 chr5:141705591-141705691 1.0000 100 chr6:32838916-32839016 1.0000 100 chr1:159391263-159391363 1.0000 100 chr12:58231524-58231624 1.0000 100 chr2:71333461-71333561 1.0000 100 chr20:36981463-36981563 1.0000 100 chr2:211113186-211113286 1.0000 100 chr7:12536276-12536376 1.0000 100 chr12:48206339-48206439 1.0000 100 chr18:12862240-12862340 1.0000 100 chr10:103985677-10398577 1.0000 100 chr11:61559191-61559291 1.0000 100 chr11:71459770-71459870 1.0000 100 chr4:73752016-73752116 1.0000 100 chr2:111891186-111891286 1.0000 100 chr20:43150573-43150673 1.0000 100 chr5:150138060-150138160 1.0000 100 chr8:89033166-89033266 1.0000 100 chr2:95858630-95858730 1.0000 100 chr18:24062501-24062601 1.0000 100 chr12:4313055-4313155 1.0000 100 chr10:119105991-11910609 1.0000 100 chr20:34042430-34042530 1.0000 100 chr5:148941239-148941339 1.0000 100 chr1:157131696-157131796 1.0000 100 chr18:29324459-29324559 1.0000 100 chr4:333221-333321 1.0000 100 chr19:42772789-42772889 1.0000 100 chr19:53072925-53073025 1.0000 100 chr11:6406243-6406343 1.0000 100 chr21:37500182-37500282 1.0000 100 chr19:46498124-46498224 1.0000 100 chr1:152458914-152459014 1.0000 100 chr16:68396642-68396742 1.0000 100 chr11:69453679-69453779 1.0000 100 chr2:70872719-70872819 1.0000 100 chr2:10522146-10522246 1.0000 100 chr11:67348823-67348923 1.0000 100 chr16:46892043-46892143 1.0000 100 chr1:117602470-117602570 1.0000 100 chr5:126872226-126872326 1.0000 100 chr1:7939283-7939383 1.0000 100 chr3:79816267-79816367 1.0000 100 chr19:51142437-51142537 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme cutnotseq_memechip_out/seqs-sampled -oc cutnotseq_memechip_out/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile cutnotseq_memechip_out/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 582 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58200 N= 582 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.262 C 0.238 G 0.238 T 0.262 Background letter frequencies (from cutnotseq_memechip_out/background): A 0.268 C 0.232 G 0.232 T 0.268 ******************************************************************************** ******************************************************************************** MOTIF GGRGGMGGGGSYKSGGGSRGG MEME-1 width = 21 sites = 155 llr = 1413 E-value = 1.7e-056 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGRGGMGGGGSYKSGGGSRGG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 313114:133211:2111321 pos.-specific C 212124:1:145232134212 probability G 57577:986641555764567 matrix T 111::2:::::33211:1:1: bits 2.1 1.9 1.7 * 1.5 * Relative 1.3 * Entropy 1.1 * ** (13.2 bits) 0.8 ** ** * * 0.6 * ** **** ** * 0.4 *********** **** *** 0.2 ********************* 0.0 --------------------- Multilevel GGGGGCGGGGCCGGGGGGGGG consensus A A CA AAGTTC CCA C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRGGMGGGGSYKSGGGSRGG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chr16:66959252-66959352 - 56 3.62e-12 AGCGTGGACC GGGGGCGGGAGCGGGGGCGGG TGGAGGCTTA chr3:51740562-51740662 + 11 7.05e-11 GGGCTGgggg cgggccggggccgggggcggg gcggggcggg chr16:89237680-89237780 - 3 1.08e-09 GTGGGGCAGG CGGGGCGGGGCCGGGGCCGAG GG chr19:14561179-14561279 + 53 1.90e-08 TGCAACTGTG AGGGGCGGGGCCTCAGCGAGG GGGCATGGTT chr6:30684559-30684659 - 33 2.28e-08 TGAACTCTAA GGGGGCGGGGCTTTGGGTGTG CCTCCGCTCG chr3:52039299-52039399 + 77 2.74e-08 ACCCTGGCGC AGAGGAGGGGCCTGGGGGCTG CGG chr7:153686928-153687028 - 17 2.74e-08 AGAGCCAGCA GGGGGCGGGGCTTGCTGGGGG ACTGGCTCTG chr3:42543824-42543924 - 39 5.55e-08 ATGGATGGGT GGAGGCGGGGCCGCCGCGCAG GTATGGGGCG chr19:46002501-46002601 + 73 7.81e-08 GCCAAAATAC AGGGGCGGAGCCTGAGGGATG CTTTGAG chr1:110198979-110199079 + 15 9.22e-08 GCTGCACTGT GGGACCGGGCGCGTGGGCGGG AAGTGCCGAG chr22:20193687-20193787 + 2 9.22e-08 t gggggtggagccctaggcagg gaccacgccc chr16:2652937-2653037 + 7 1.28e-07 CGGAGT GGGGGCGCGGTTGGGGGCGGG TGTCTGCCAT chr17:71308014-71308114 - 1 1.28e-07 GAGGGTTGCG CGGGGCGGGCGCGGGCGGAGC chr5:150138060-150138160 - 15 1.50e-07 CACTTGGAAA GGAGGAGCAGCCTCGGGTGGG ACTGAGCGGA chr2:219737105-219737205 + 62 1.77e-07 CCTGAGGCAT CGGGCAGGGGGAGGAGGGGGC CTGAAGAGGA chr2:232260119-232260219 + 74 2.42e-07 caggcggcgg cggggcgggccctgggcgccg AAGGGG chr2:10952622-10952722 - 18 2.82e-07 GCCTGGGGCG GGACGTGGGCGCGGGGGCGCG GCGTGCGGCA chr11:67572782-67572882 + 68 2.82e-07 GCTGCGCTCA GGAGGCGGGCCCTGGGAGGCG GAGCTTAGGG chr19:56135400-56135500 - 15 3.29e-07 GAAGGGGCCT GGGCGTGGGGCTCGAGGTGGG AGGAGGTCGT chr2:202316151-202316251 + 25 5.14e-07 GGAGGGAGGC GGGGCCGCGACCCCGGCGCGG GTGGGGCGAA chr19:17687534-17687634 + 17 5.14e-07 gccagggctg agaggcaggactgggggcggg gtgaagctgg chr8:23820548-23820648 - 76 5.14e-07 GTGG GGAGCAGGAAAAGGGGGGAGG GGGAGACCTG chr14:105330324-10533042 - 61 5.14e-07 GGATCAACGT GGGGGCGGGGCAGCGTGCCCG AAGGGCATTG chr1:159391263-159391363 + 18 9.15e-07 ggtaccagca gtggcagggagggtgggcagg ttcttaagca chr19:48706931-48707031 + 28 1.05e-06 TGCAGTCTCT GGGTGAGGAGGCGGACGCGGG AAACCTGCTT chr18:45936725-45936825 - 52 1.21e-06 TCCCGCTTCT GAGGGAGGAGCCCCGGAGAGG ACCCGCTGAC chr14:54955038-54955138 - 79 1.21e-06 C GGAGCCGGCGGCGGCGGGCAG CGCCCAGGAG chr12:98812313-98812413 + 75 1.21e-06 CAGATGGTGG GGGCGTGGGCCTGCAGGCGGC CCAGG chr1:236029821-236029921 + 57 1.39e-06 GGGAAGGCAG GGGGGCGGGCCGACCCGCGGG GCTGCAGCCG chr16:57798621-57798721 + 38 1.59e-06 GGCTGTGATG GTAGGAGGGGCCTTGGGAGTG GGCAGGGCCA chr22:30234248-30234348 - 44 1.59e-06 AGGAAGGGAG ATAGGAGGGGAAGGGGGCGTG GCTACAGACG chr16:86108010-86108110 + 73 1.82e-06 GTGGGCAGGC ATGGGCGGGGACGGTGGGCAG GGCAGCA chr18:44786484-44786584 + 39 1.82e-06 GCCCAGTGGT TGGGCCGGAGACGGGGCTAGG GGTGCACCCT chr11:60775457-60775557 - 40 1.82e-06 CAGAGACCTG GTGGGCGGGGCCTGGAGGGCA GGTTTGGGAG chr3:49893792-49893892 + 75 2.07e-06 AAATTCTCGG ATGGGCGGAACTATGGGCGGG GCTTA chr12:56497833-56497933 - 17 2.36e-06 GCTCCGGCGG GAAGGCGGAGCCGTTGGGGAG CTTGAGGGGA chr5:150632056-150632156 - 3 2.69e-06 CGGAACTGAG CGCGGCGGGGCTGAAGGCGGC TG chr6:13328184-13328284 - 73 2.69e-06 CACGTCC GGCGGCGGCGGCAGCGGCAGC GGCAGCGGCG chr19:47776629-47776729 - 77 3.06e-06 GGG AGGCCTGCGGGAGGGGGGAGG GAAGACGGAT chr11:67120586-67120686 + 22 3.48e-06 GCCGCCTATG CGGGGCGGGGCCCTGGCGCTA GCCAATGGTA chr10:126432462-12643256 - 12 3.48e-06 CCGGGGCCTC GCAGGCGCGAGCGCGGCGAGC GGCGCGCGGC chr2:85464734-85464834 + 47 3.95e-06 AGTGACGCAG GGGGAAGGTGATGCGGGCAGG ACCCAACAGG chr15:79019062-79019162 - 61 4.48e-06 AAAGATGAAA GGGAAAGGAGGCGTGGCCAGG CAGCAGTGTG chr8:81082948-81083048 - 19 4.48e-06 TGGGGCCCTG GAAGGAGCGGCTCTGGCGGGG GCAGATGGGA chr5:40835221-40835321 + 51 4.48e-06 ATCGCGTTTC AGTGCCGGAAAGGCGGGCGGG ACTCCCAGTT chr19:10381417-10381517 + 58 4.48e-06 CCAGGTGAGT CGGGGTGGGGATTGCCGTCGG GCCAGTTCTC chr11:64879041-64879141 + 35 5.07e-06 TGTCCAGGCA GGTGCAGGCGCCGCGGGGCCG GATCCTCCGC chr1:204049151-204049251 - 69 5.07e-06 AACCACCAGA GCGGGAGGGGAGCCAGGAGGG CTCCTGCCCA chr20:24972995-24973095 - 14 5.07e-06 GGAGTCCGAG ACAGGCGGGGACCCCGGCAGC TCCCGGTGCT chr17:21187483-21187583 + 21 5.73e-06 TGCATGTTGA CGGGCAGCGCGAGGGGCGCGG CTTTAGTCCA chr16:1156819-1156919 + 10 6.47e-06 CCCGATGGC GGACGTGGAGGCGTGCGCCGC ACTCCCGGGC chr15:98503416-98503516 - 45 6.47e-06 CAGTATCTGT CAGGGAGGGGGCGGAACAGGG TTATCTCCGG chr19:53836532-53836632 - 48 6.47e-06 CAGGTACAGA AGCGCCGGGGACTTGGGAAGC GCAGACTTAA chr5:137548925-137549025 + 51 6.47e-06 GCCACGACCT CTGGGCGGGGCGGGGAAGAGG GGAATGAGTG chr17:41656040-41656140 - 47 6.47e-06 CCCGGCTTCA GGCCCAGGAGCCAGGGGAAGG TCTGAAGAGG chr1:149763979-149764079 - 13 6.47e-06 CAATCCTCCT CTCCGCGGAGGCTCGGCCGGG CGCACCTGAG chr11:118663368-11866346 - 5 7.29e-06 TGATTGGCCC AGAGCTGGAAGCAGGGGCAAG AAAT chr12:56211430-56211530 + 46 7.29e-06 TTCAAAAGGT GGAACTGGGAGAGGGGCGGGC ACTGTATCTT chr7:105622411-105622511 + 69 7.29e-06 catgaacccg ggaggtggagcttgcagtgag ctgagattgc chr5:1668034-1668134 + 36 8.22e-06 GTGTGCAGGG AGGCGTGGGGGCTGGCAGGTG TGGGGGCTGC chr12:56984691-56984791 + 23 9.24e-06 TGTACATCCT AGGGGTGAGGGAGTGCGGGGC AATGGGTAGG chr19:50433132-50433232 + 13 9.24e-06 ACATTGCTGA AGGGCTGCGGCCTGGGGCAGT TCCCCTGGGA chr22:43485038-43485138 - 7 9.24e-06 GAGTGCAGCG CGGGGCGGGGCGGGCCGGTGC GCCTGG chr6:30806111-30806211 + 63 9.24e-06 CCTTCTAGGC ATGGCAGGGGCAGTGGAGAGG CTACTTCCTC chr1:28573635-28573735 - 70 1.04e-05 CACCGGCCAA TGAGCAGGAAGATGGGCGGGG TTTCTTGGCA chr2:71356933-71357033 - 51 1.04e-05 ATGGGACAGG GAGCGTGGGAACGGCGGTCGG GGGCGGAGGA chr17:47448240-47448340 + 71 1.04e-05 AGCAGTGCAG GGAAGAGGGGCTTGCAAGGGG GAACGGTGG chr19:46807176-46807276 - 48 1.17e-05 TCGATTCCAG GGGGGTGGGGCTCCGCCGAAA AAAACGACAC chr15:74611930-74612030 - 43 1.17e-05 AGCTTGGAGG GGTGGCAGGGCCTTGGCCGGC AGCTGACCTC chr6:30483751-30483851 + 7 1.17e-05 AACAGA GGAAGTGGGAGCGGCAGGAAG CGCTTTGGGA chr9:130889995-130890095 - 67 1.17e-05 GGTCACAGTA GGAAGCGGACAATGAGGCGGG AGGGCAGAGA chr19:10530677-10530777 + 50 1.17e-05 CCTCCCAGCC CGGAGCGGGGATCTGCGTGGG CGGGAAGGGC chr19:40909350-40909450 - 39 1.31e-05 GGGTGTGGGG CGGGGTCGAACTGCGGGGGCG GGGTTAGGAA chr15:79093192-79093292 - 23 1.31e-05 TGAAAACACG AGGGGAGGGGCACCTGGGGTA GGCAATAGTG chr12:125218839-12521893 - 20 1.31e-05 AAGTTGCAGT AGCAGAGGAGCTCCCGGCGGC TTTGAAGAAG chr11:94800547-94800647 - 9 1.46e-05 TAGCGAGATC GGCTGCGGGACCTGGAGCAGC TGGGACCC chr19:47213825-47213925 - 75 1.46e-05 GGGCC TGGGGCGGGGCTCTGCACCGG GGGCGGAGCG chr11:61559191-61559291 - 5 1.64e-05 CGATTTCTAA GGGCGAGAGGCGTGGGGCGAA TTTT chr17:48637164-48637264 - 53 1.83e-05 ACCCCTGATT TGGGCAGCAGCCGGAGGACGG AGCTCAGCTC chr9:124016461-124016561 - 70 1.83e-05 GGAGTCTGAG GGAGCAGGAACTTGGGAGAGA GAAAAGGGAA chr1:24790962-24791062 + 57 1.83e-05 cccagcaggg agtggtgggacctgcggagga ctggagagtg chr2:121832313-121832413 - 42 1.83e-05 CTCATGGCAG ATGGCAGGAGCTGGCTGCAGG CCCTCGTTGG chr7:2671095-2671195 + 28 1.83e-05 CCATTGGGTA ATGGGCGGGGATGCGAGTGGA GGGGCAAAAC chr2:71333461-71333561 - 73 2.04e-05 GAACCTG GGAGGTGGAAGTTGCAGTGAG CCAAGATCAC chr20:34042430-34042530 - 78 2.28e-05 CC GGCGCAGGGCCTCCCGCCATG TTGGGTATTG chr2:85640636-85640736 - 40 2.28e-05 GTAAGAAAAG GCGGGAGAGGGTGGGTCCGTG CTAAAGAAAT chr17:47492155-47492255 + 35 2.28e-05 AAGGCTATGC AGCGGCGGGCCCGCGGAGAAA AGCGTTTTCT chr22:50311122-50311222 + 62 2.28e-05 GCCCCAAGTG AGGGGTGCAGCCCCAGGTAAG GAGCACGGGG chr19:14062862-14062962 + 80 2.54e-05 GTCCTTAAGG CGGGGCGGGAATACGGCAACG chr3:52188342-52188442 - 47 2.54e-05 TAGAGTAGCC GGACGACGGGCTGGTGGGGTG AACCCTTCAT chr12:107487425-10748752 + 78 2.83e-05 AGACCCGGAT GAGCACGGGGATGCGGGGAGC TT chr15:52553905-52554005 + 4 2.83e-05 ATA AGGGAAGGGACTGGCAGTGGC ATTTGGTTTC chr17:19140613-19140713 - 71 2.83e-05 GGCGTAGGG ACCAGCGGGGCGGCAGGGGCG CATGCCCTGG chr3:173302501-173302601 + 77 3.14e-05 CAATACTTTA AGGAGAGGAGGCAGCGGTGCC TTG chr10:103985677-10398577 + 22 3.49e-05 GGCGATGGCC TACGACGGGACTTGGGGCGGG GTGTGCGAAA chr11:119341733-11934183 - 78 3.49e-05 AC CGGGCAGGAGCAAGGCAGAGG GGTAAGGGAG chr4:186049448-186049548 + 1 3.49e-05 . GGCGCCGGGACCCCGACGCAC CCCGCGCATA chr19:17952507-17952607 - 23 3.49e-05 CGAGAGCTGG GAGGCTGCGAAGCGGGGCAGG GATCAAGGGG chr12:56139205-56139305 - 10 3.88e-05 AGCCTGAGAG GGTAGAGGGAACTAGGGCAGG CAGAGCAGC chr5:1883760-1883860 + 53 3.88e-05 CGGAGCAATC GGAAGAGGGGACCGAGCGCCC ACCCCAGGAC chr19:48116380-48116480 + 34 3.88e-05 CCCGCCCTGC AGGGGAGAGGGGTGGGGAGTA TGGTTATCTT chr2:167241218-167241318 - 55 3.88e-05 CTTGAACCTG AGAGGTGGAGGTTGCAGTAAG CCAAGATTGC chr1:6208587-6208687 + 4 4.30e-05 gtc cggcgcggggcgggcggAACA CTCACAGTAC chr14:38875005-38875105 + 45 4.30e-05 GTTCTTGTTT ATAAGAGGAGGGTTGGGCAGG GTGAGTGGAG chr20:44844526-44844626 + 71 4.76e-05 GCCTGAGCCT GGGACAGAGGGGTTGGCTGGG CTGATAGGG chr19:42746712-42746812 - 16 5.26e-05 ACACCTGCAA TGCGGTGAGGGCGTGGCGACG ACTCCATTTC chr16:10837828-10837928 + 3 5.26e-05 GC GTGGGAGGGAGGGGGCGGGAT CTGCAGAATG chr17:46936528-46936628 + 65 5.26e-05 cttgaacctg ggagacggaggttgcagtgag ccgagatggt chr9:35814973-35815073 - 8 5.26e-05 AGCCCTTTCT GCAGCAGGTGGCGGAGCCCCG CCCCCTT chr2:177314626-177314726 - 61 5.26e-05 TCAGATTCCA GATGGTGGAAAGTCGGGGAGG AGCCCTGAAA chr10:94821683-94821783 - 6 5.82e-05 CGAGAACTGT GGAAGCGCGAGCCCTGCGGGC GAGGC chr1:46713116-46713216 - 47 6.43e-05 GACCCAAGGA AGAGGCGGGAATAGTGCTGCG CCCAATGAGG chr22:37882375-37882475 - 39 7.09e-05 ACAGCTCTCT GGGGGAGTGGACGGTGCTGGA GGACACTCCC chr7:73038804-73038904 - 69 7.09e-05 CAAGGAAAGA CGGGAAGGGAGATGGGGCCAA CCCGCCAGAG chrX:48931560-48931660 - 70 7.09e-05 CTGCGGCGCC CCGCGCGGGGGTGGATGGCAG TTTTAAGGGT chr5:145235468-145235568 - 59 7.81e-05 CCTGTTAGGT GCGCCAGGACACTGGGAGAGG AGAGGGAGGA chr17:36452705-36452805 - 60 7.81e-05 TGAGCAGCGA GGACGCGCACGTGCTCGCGGG AGTGGGGGAG chr19:2456962-2457062 + 68 8.61e-05 atatagggcc gggcgtggtggctcacgcctg taatcccagc chr1:162760073-162760173 - 43 8.61e-05 GATCTTTAAT CCTGGTGGGGGCGTCACCCGG CCTAGCACTC chr11:75118007-75118107 - 56 8.61e-05 CAGCACTTTG AGGGGCCGAGGCAGGCGGATC ACGAGGTCAG chr7:30785632-30785732 + 66 8.61e-05 GTTGCCggcc aggcgcggtggctcacgcctg taatcccagc chr19:19303300-19303400 + 6 9.47e-05 GGTAA AGGTGAGCGGGCGCAGGCGTA GTGAAATTCT chr8:38039119-38039219 + 7 9.47e-05 aaccag ggaggcggtggtcgcagtgac cgagatcatg chr12:120633072-12063317 - 24 9.47e-05 AGCCTCCCCA GTAGCTGGGACTACAGGCATG TGCCACCACT chr1:205345095-205345195 - 17 9.47e-05 AGAGAGTGAA GCGGGTGGGGAGAGATGCGGC TGGAAAAGAA chr2:47629402-47629502 + 41 1.04e-04 TAGAAAGAAA AAGGGAGGCAGTCGGAGAGGG GCACACGTTT chr14:94492413-94492513 - 57 1.04e-04 CGGGCAATCA GAAGCCGGGACGCGGGACGTC ATAGAAAGTG chr14:77314977-77315077 + 32 1.04e-04 gaaaaatgga cgaggaaagggtgggtgcggg tgcagtaagt chr5:169611740-169611840 - 14 1.04e-04 GAAGAGAAGC ATGGGAGAGAGATGTGGGGAG TAATCTGAAC chr12:48206339-48206439 + 28 1.25e-04 CGCCTGGGAG GGCGCAGCGGACGTCCCGGAC GTGCAGGTTT chr19:54410601-54410701 + 19 1.25e-04 CCTAGGAATC GGCGACGGAGGCACACGGCAG GCAGACGCGC chr3:5164071-5164171 - 14 1.25e-04 AACCAGTCCA GCAGGCGGGAGATGAGCGCCA GCATGATGGC chr16:24266782-24266882 + 7 1.25e-04 TCCTAG AGCGGAGGAACCGGGTCGTGC TGCAGCGCCC chr19:17320118-17320218 + 61 1.25e-04 TGCTGTGAGT ACCGGTGATCGTGGGGGCGGG ACCTCTTTGG chr11:67348823-67348923 - 42 1.38e-04 GTCTGGGGGT GCTGCAGGAGACTAGGGCGTG TTTCATCCCT chr19:48248434-48248534 + 77 1.38e-04 CGTCACGGAA GAGGGTGGGAAATCTGCGCGC GCA chr1:16532830-16532930 - 51 1.38e-04 AAAGGGGGTT GCTGGCGCGACTGTCCGCGCG GAAGGTTGGC chr19:53038733-53038833 + 31 1.51e-04 CTTCAGTCCT GGGCGCGCAAACCCCGAGGCG GATCGCGTGG chr6:31587568-31587668 - 76 1.51e-04 TGGG AGCGGAGAGACGTTGGGACGC CAAAAGTGGA chr19:51142437-51142537 - 15 1.65e-04 CCGCAGCAGC GCGAGCGCGAGACCTGCCGGG AATTGTAGTC chr11:69453679-69453779 - 17 1.65e-04 GAGCCAATGG GGGCGCGGCGCTGTTACTAGG CGGACCGGGC chr3:11313745-11313845 - 71 1.65e-04 CCACTGGGA AGCGGCGCGCGTGCGCAAAGG AGCAGAGGCA chr11:33182894-33182994 + 31 1.65e-04 CTGCGCCCCT GCCGGCCGAGGAGGAGGTGTG TGGCTTCCGC chr8:11626946-11627046 + 51 1.80e-04 CCCCTAAGGG GACGGAGGCCGCATGGGCCGC CGAGCCGGGA chr16:68482359-68482459 + 80 2.15e-04 TCTTTAAGGA CGCGGAGTGGGCTCACGCCGC chr15:74286239-74286339 + 22 2.56e-04 cgcccagctc ccggcaggacgtggcacgaag cagtgccagt chr9:129317458-129317558 + 12 2.79e-04 tacaaaaaaa ttagccgggcgtgttggcgcg cacctgtaat chr19:53072925-53073025 + 57 3.59e-04 CCCGTGGAGT GAAGGTCGCACCGCGGCGGTG AGTTTTGCTC chr19:51611117-51611217 - 39 3.90e-04 TCCGGCTCTT TGTTGCGGTGCCGTGGGAGGG TTGAGGGTCT chr1:6579940-6580040 - 23 4.59e-04 GGCTTTGCCA GGAAGAGCGGTAGCCGCCGAG TTGGGGGCAG chr16:29984694-29984794 + 3 4.97e-04 GG CGGGGCGAGCGCATGCGCTGC AGCTCTGTCC chr5:131831876-131831976 - 8 6.29e-04 TGGCAGTGCC CCGGCAAGGGACGCAACGCGG CCTTCCC chr22:38054254-38054354 + 69 1.07e-03 AGAGTGTAGT CGGCGTTGAAACTCGGCGGCG ACTGGTCCAG chr12:110011159-11001125 - 80 1.23e-03 . CGCGCCGAAGCCGGAGCAGCT CCCCAACTCC chr3:179322293-179322393 - 1 2.00e-03 GCCGGCTTGA GACGCCGGAAGTGACGCTATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRGGMGGGGSYKSGGGSRGG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:66959252-66959352 3.6e-12 55_[-1]_24 chr3:51740562-51740662 7e-11 10_[+1]_69 chr16:89237680-89237780 1.1e-09 2_[-1]_77 chr19:14561179-14561279 1.9e-08 52_[+1]_27 chr6:30684559-30684659 2.3e-08 32_[-1]_47 chr3:52039299-52039399 2.7e-08 76_[+1]_3 chr7:153686928-153687028 2.7e-08 16_[-1]_63 chr3:42543824-42543924 5.6e-08 38_[-1]_41 chr19:46002501-46002601 7.8e-08 72_[+1]_7 chr1:110198979-110199079 9.2e-08 14_[+1]_65 chr22:20193687-20193787 9.2e-08 1_[+1]_78 chr16:2652937-2653037 1.3e-07 6_[+1]_73 chr17:71308014-71308114 1.3e-07 [-1]_79 chr5:150138060-150138160 1.5e-07 14_[-1]_65 chr2:219737105-219737205 1.8e-07 61_[+1]_18 chr2:232260119-232260219 2.4e-07 73_[+1]_6 chr2:10952622-10952722 2.8e-07 17_[-1]_62 chr11:67572782-67572882 2.8e-07 67_[+1]_12 chr19:56135400-56135500 3.3e-07 14_[-1]_65 chr2:202316151-202316251 5.1e-07 24_[+1]_55 chr19:17687534-17687634 5.1e-07 16_[+1]_63 chr8:23820548-23820648 5.1e-07 75_[-1]_4 chr14:105330324-10533042 5.1e-07 60_[-1]_19 chr1:159391263-159391363 9.1e-07 17_[+1]_62 chr19:48706931-48707031 1.1e-06 27_[+1]_52 chr18:45936725-45936825 1.2e-06 51_[-1]_28 chr14:54955038-54955138 1.2e-06 78_[-1]_1 chr12:98812313-98812413 1.2e-06 74_[+1]_5 chr1:236029821-236029921 1.4e-06 56_[+1]_23 chr16:57798621-57798721 1.6e-06 37_[+1]_42 chr22:30234248-30234348 1.6e-06 43_[-1]_36 chr16:86108010-86108110 1.8e-06 72_[+1]_7 chr18:44786484-44786584 1.8e-06 38_[+1]_41 chr11:60775457-60775557 1.8e-06 39_[-1]_40 chr3:49893792-49893892 2.1e-06 74_[+1]_5 chr12:56497833-56497933 2.4e-06 16_[-1]_63 chr5:150632056-150632156 2.7e-06 2_[-1]_77 chr6:13328184-13328284 2.7e-06 72_[-1]_7 chr19:47776629-47776729 3.1e-06 76_[-1]_3 chr11:67120586-67120686 3.5e-06 21_[+1]_58 chr10:126432462-12643256 3.5e-06 11_[-1]_68 chr2:85464734-85464834 4e-06 46_[+1]_33 chr15:79019062-79019162 4.5e-06 60_[-1]_19 chr8:81082948-81083048 4.5e-06 18_[-1]_61 chr5:40835221-40835321 4.5e-06 50_[+1]_29 chr19:10381417-10381517 4.5e-06 57_[+1]_22 chr11:64879041-64879141 5.1e-06 34_[+1]_45 chr1:204049151-204049251 5.1e-06 68_[-1]_11 chr20:24972995-24973095 5.1e-06 13_[-1]_66 chr17:21187483-21187583 5.7e-06 20_[+1]_59 chr16:1156819-1156919 6.5e-06 9_[+1]_70 chr15:98503416-98503516 6.5e-06 44_[-1]_35 chr19:53836532-53836632 6.5e-06 47_[-1]_32 chr5:137548925-137549025 6.5e-06 50_[+1]_29 chr17:41656040-41656140 6.5e-06 46_[-1]_33 chr1:149763979-149764079 6.5e-06 12_[-1]_67 chr11:118663368-11866346 7.3e-06 4_[-1]_75 chr12:56211430-56211530 7.3e-06 45_[+1]_34 chr7:105622411-105622511 7.3e-06 68_[+1]_11 chr5:1668034-1668134 8.2e-06 35_[+1]_44 chr12:56984691-56984791 9.2e-06 22_[+1]_57 chr19:50433132-50433232 9.2e-06 12_[+1]_67 chr22:43485038-43485138 9.2e-06 6_[-1]_73 chr6:30806111-30806211 9.2e-06 62_[+1]_17 chr1:28573635-28573735 1e-05 69_[-1]_10 chr2:71356933-71357033 1e-05 50_[-1]_29 chr17:47448240-47448340 1e-05 70_[+1]_9 chr19:46807176-46807276 1.2e-05 47_[-1]_32 chr15:74611930-74612030 1.2e-05 42_[-1]_37 chr6:30483751-30483851 1.2e-05 6_[+1]_73 chr9:130889995-130890095 1.2e-05 66_[-1]_13 chr19:10530677-10530777 1.2e-05 49_[+1]_30 chr19:40909350-40909450 1.3e-05 38_[-1]_41 chr15:79093192-79093292 1.3e-05 22_[-1]_57 chr12:125218839-12521893 1.3e-05 19_[-1]_60 chr11:94800547-94800647 1.5e-05 8_[-1]_71 chr19:47213825-47213925 1.5e-05 74_[-1]_5 chr11:61559191-61559291 1.6e-05 4_[-1]_75 chr17:48637164-48637264 1.8e-05 52_[-1]_27 chr9:124016461-124016561 1.8e-05 69_[-1]_10 chr1:24790962-24791062 1.8e-05 56_[+1]_23 chr2:121832313-121832413 1.8e-05 41_[-1]_38 chr7:2671095-2671195 1.8e-05 27_[+1]_52 chr2:71333461-71333561 2e-05 72_[-1]_7 chr20:34042430-34042530 2.3e-05 77_[-1]_2 chr2:85640636-85640736 2.3e-05 39_[-1]_40 chr17:47492155-47492255 2.3e-05 34_[+1]_45 chr22:50311122-50311222 2.3e-05 61_[+1]_18 chr19:14062862-14062962 2.5e-05 79_[+1] chr3:52188342-52188442 2.5e-05 46_[-1]_33 chr12:107487425-10748752 2.8e-05 77_[+1]_2 chr15:52553905-52554005 2.8e-05 3_[+1]_76 chr17:19140613-19140713 2.8e-05 70_[-1]_9 chr3:173302501-173302601 3.1e-05 76_[+1]_3 chr10:103985677-10398577 3.5e-05 21_[+1]_58 chr11:119341733-11934183 3.5e-05 77_[-1]_2 chr4:186049448-186049548 3.5e-05 [+1]_79 chr19:17952507-17952607 3.5e-05 22_[-1]_57 chr12:56139205-56139305 3.9e-05 9_[-1]_70 chr5:1883760-1883860 3.9e-05 52_[+1]_27 chr19:48116380-48116480 3.9e-05 33_[+1]_46 chr2:167241218-167241318 3.9e-05 54_[-1]_25 chr1:6208587-6208687 4.3e-05 3_[+1]_76 chr14:38875005-38875105 4.3e-05 44_[+1]_35 chr20:44844526-44844626 4.8e-05 70_[+1]_9 chr19:42746712-42746812 5.3e-05 15_[-1]_64 chr16:10837828-10837928 5.3e-05 2_[+1]_77 chr17:46936528-46936628 5.3e-05 64_[+1]_15 chr9:35814973-35815073 5.3e-05 7_[-1]_72 chr2:177314626-177314726 5.3e-05 60_[-1]_19 chr10:94821683-94821783 5.8e-05 5_[-1]_74 chr1:46713116-46713216 6.4e-05 46_[-1]_33 chr22:37882375-37882475 7.1e-05 38_[-1]_41 chr7:73038804-73038904 7.1e-05 68_[-1]_11 chrX:48931560-48931660 7.1e-05 69_[-1]_10 chr5:145235468-145235568 7.8e-05 58_[-1]_21 chr17:36452705-36452805 7.8e-05 59_[-1]_20 chr19:2456962-2457062 8.6e-05 67_[+1]_12 chr1:162760073-162760173 8.6e-05 42_[-1]_37 chr11:75118007-75118107 8.6e-05 55_[-1]_24 chr7:30785632-30785732 8.6e-05 65_[+1]_14 chr19:19303300-19303400 9.5e-05 5_[+1]_74 chr8:38039119-38039219 9.5e-05 6_[+1]_73 chr12:120633072-12063317 9.5e-05 23_[-1]_56 chr1:205345095-205345195 9.5e-05 16_[-1]_63 chr2:47629402-47629502 0.0001 40_[+1]_39 chr14:94492413-94492513 0.0001 56_[-1]_23 chr14:77314977-77315077 0.0001 31_[+1]_48 chr5:169611740-169611840 0.0001 13_[-1]_66 chr12:48206339-48206439 0.00013 27_[+1]_52 chr19:54410601-54410701 0.00013 18_[+1]_61 chr3:5164071-5164171 0.00013 13_[-1]_66 chr16:24266782-24266882 0.00013 6_[+1]_73 chr19:17320118-17320218 0.00013 60_[+1]_19 chr11:67348823-67348923 0.00014 41_[-1]_38 chr19:48248434-48248534 0.00014 76_[+1]_3 chr1:16532830-16532930 0.00014 50_[-1]_29 chr19:53038733-53038833 0.00015 30_[+1]_49 chr6:31587568-31587668 0.00015 75_[-1]_4 chr19:51142437-51142537 0.00016 14_[-1]_65 chr11:69453679-69453779 0.00016 16_[-1]_63 chr3:11313745-11313845 0.00016 70_[-1]_9 chr11:33182894-33182994 0.00016 30_[+1]_49 chr8:11626946-11627046 0.00018 50_[+1]_29 chr16:68482359-68482459 0.00022 79_[+1] chr15:74286239-74286339 0.00026 21_[+1]_58 chr9:129317458-129317558 0.00028 11_[+1]_68 chr19:53072925-53073025 0.00036 56_[+1]_23 chr19:51611117-51611217 0.00039 38_[-1]_41 chr1:6579940-6580040 0.00046 22_[-1]_57 chr16:29984694-29984794 0.0005 2_[+1]_77 chr5:131831876-131831976 0.00063 7_[-1]_72 chr22:38054254-38054354 0.0011 68_[+1]_11 chr12:110011159-11001125 0.0012 79_[-1] chr3:179322293-179322393 0.002 [-1]_79 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRGGMGGGGSYKSGGGSRGG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGRGGMGGGGSYKSGGGSRGG width=21 seqs=155 chr16:66959252-66959352 ( 56) GGGGGCGGGAGCGGGGGCGGG 1 chr3:51740562-51740662 ( 11) CGGGCCGGGGCCGGGGGCGGG 1 chr16:89237680-89237780 ( 3) CGGGGCGGGGCCGGGGCCGAG 1 chr19:14561179-14561279 ( 53) AGGGGCGGGGCCTCAGCGAGG 1 chr6:30684559-30684659 ( 33) GGGGGCGGGGCTTTGGGTGTG 1 chr3:52039299-52039399 ( 77) AGAGGAGGGGCCTGGGGGCTG 1 chr7:153686928-153687028 ( 17) GGGGGCGGGGCTTGCTGGGGG 1 chr3:42543824-42543924 ( 39) GGAGGCGGGGCCGCCGCGCAG 1 chr19:46002501-46002601 ( 73) AGGGGCGGAGCCTGAGGGATG 1 chr1:110198979-110199079 ( 15) GGGACCGGGCGCGTGGGCGGG 1 chr22:20193687-20193787 ( 2) GGGGGTGGAGCCCTAGGCAGG 1 chr16:2652937-2653037 ( 7) GGGGGCGCGGTTGGGGGCGGG 1 chr17:71308014-71308114 ( 1) CGGGGCGGGCGCGGGCGGAGC 1 chr5:150138060-150138160 ( 15) GGAGGAGCAGCCTCGGGTGGG 1 chr2:219737105-219737205 ( 62) CGGGCAGGGGGAGGAGGGGGC 1 chr2:232260119-232260219 ( 74) CGGGGCGGGCCCTGGGCGCCG 1 chr2:10952622-10952722 ( 18) GGACGTGGGCGCGGGGGCGCG 1 chr11:67572782-67572882 ( 68) GGAGGCGGGCCCTGGGAGGCG 1 chr19:56135400-56135500 ( 15) GGGCGTGGGGCTCGAGGTGGG 1 chr2:202316151-202316251 ( 25) GGGGCCGCGACCCCGGCGCGG 1 chr19:17687534-17687634 ( 17) AGAGGCAGGACTGGGGGCGGG 1 chr8:23820548-23820648 ( 76) GGAGCAGGAAAAGGGGGGAGG 1 chr14:105330324-10533042 ( 61) GGGGGCGGGGCAGCGTGCCCG 1 chr1:159391263-159391363 ( 18) GTGGCAGGGAGGGTGGGCAGG 1 chr19:48706931-48707031 ( 28) GGGTGAGGAGGCGGACGCGGG 1 chr18:45936725-45936825 ( 52) GAGGGAGGAGCCCCGGAGAGG 1 chr14:54955038-54955138 ( 79) GGAGCCGGCGGCGGCGGGCAG 1 chr12:98812313-98812413 ( 75) GGGCGTGGGCCTGCAGGCGGC 1 chr1:236029821-236029921 ( 57) GGGGGCGGGCCGACCCGCGGG 1 chr16:57798621-57798721 ( 38) GTAGGAGGGGCCTTGGGAGTG 1 chr22:30234248-30234348 ( 44) ATAGGAGGGGAAGGGGGCGTG 1 chr16:86108010-86108110 ( 73) ATGGGCGGGGACGGTGGGCAG 1 chr18:44786484-44786584 ( 39) TGGGCCGGAGACGGGGCTAGG 1 chr11:60775457-60775557 ( 40) GTGGGCGGGGCCTGGAGGGCA 1 chr3:49893792-49893892 ( 75) ATGGGCGGAACTATGGGCGGG 1 chr12:56497833-56497933 ( 17) GAAGGCGGAGCCGTTGGGGAG 1 chr5:150632056-150632156 ( 3) CGCGGCGGGGCTGAAGGCGGC 1 chr6:13328184-13328284 ( 73) GGCGGCGGCGGCAGCGGCAGC 1 chr19:47776629-47776729 ( 77) AGGCCTGCGGGAGGGGGGAGG 1 chr11:67120586-67120686 ( 22) CGGGGCGGGGCCCTGGCGCTA 1 chr10:126432462-12643256 ( 12) GCAGGCGCGAGCGCGGCGAGC 1 chr2:85464734-85464834 ( 47) GGGGAAGGTGATGCGGGCAGG 1 chr15:79019062-79019162 ( 61) GGGAAAGGAGGCGTGGCCAGG 1 chr8:81082948-81083048 ( 19) GAAGGAGCGGCTCTGGCGGGG 1 chr5:40835221-40835321 ( 51) AGTGCCGGAAAGGCGGGCGGG 1 chr19:10381417-10381517 ( 58) CGGGGTGGGGATTGCCGTCGG 1 chr11:64879041-64879141 ( 35) GGTGCAGGCGCCGCGGGGCCG 1 chr1:204049151-204049251 ( 69) GCGGGAGGGGAGCCAGGAGGG 1 chr20:24972995-24973095 ( 14) ACAGGCGGGGACCCCGGCAGC 1 chr17:21187483-21187583 ( 21) CGGGCAGCGCGAGGGGCGCGG 1 chr16:1156819-1156919 ( 10) GGACGTGGAGGCGTGCGCCGC 1 chr15:98503416-98503516 ( 45) CAGGGAGGGGGCGGAACAGGG 1 chr19:53836532-53836632 ( 48) AGCGCCGGGGACTTGGGAAGC 1 chr5:137548925-137549025 ( 51) CTGGGCGGGGCGGGGAAGAGG 1 chr17:41656040-41656140 ( 47) GGCCCAGGAGCCAGGGGAAGG 1 chr1:149763979-149764079 ( 13) CTCCGCGGAGGCTCGGCCGGG 1 chr11:118663368-11866346 ( 5) AGAGCTGGAAGCAGGGGCAAG 1 chr12:56211430-56211530 ( 46) GGAACTGGGAGAGGGGCGGGC 1 chr7:105622411-105622511 ( 69) GGAGGTGGAGCTTGCAGTGAG 1 chr5:1668034-1668134 ( 36) AGGCGTGGGGGCTGGCAGGTG 1 chr12:56984691-56984791 ( 23) AGGGGTGAGGGAGTGCGGGGC 1 chr19:50433132-50433232 ( 13) AGGGCTGCGGCCTGGGGCAGT 1 chr22:43485038-43485138 ( 7) CGGGGCGGGGCGGGCCGGTGC 1 chr6:30806111-30806211 ( 63) ATGGCAGGGGCAGTGGAGAGG 1 chr1:28573635-28573735 ( 70) TGAGCAGGAAGATGGGCGGGG 1 chr2:71356933-71357033 ( 51) GAGCGTGGGAACGGCGGTCGG 1 chr17:47448240-47448340 ( 71) GGAAGAGGGGCTTGCAAGGGG 1 chr19:46807176-46807276 ( 48) GGGGGTGGGGCTCCGCCGAAA 1 chr15:74611930-74612030 ( 43) GGTGGCAGGGCCTTGGCCGGC 1 chr6:30483751-30483851 ( 7) GGAAGTGGGAGCGGCAGGAAG 1 chr9:130889995-130890095 ( 67) GGAAGCGGACAATGAGGCGGG 1 chr19:10530677-10530777 ( 50) CGGAGCGGGGATCTGCGTGGG 1 chr19:40909350-40909450 ( 39) CGGGGTCGAACTGCGGGGGCG 1 chr15:79093192-79093292 ( 23) AGGGGAGGGGCACCTGGGGTA 1 chr12:125218839-12521893 ( 20) AGCAGAGGAGCTCCCGGCGGC 1 chr11:94800547-94800647 ( 9) GGCTGCGGGACCTGGAGCAGC 1 chr19:47213825-47213925 ( 75) TGGGGCGGGGCTCTGCACCGG 1 chr11:61559191-61559291 ( 5) GGGCGAGAGGCGTGGGGCGAA 1 chr17:48637164-48637264 ( 53) TGGGCAGCAGCCGGAGGACGG 1 chr9:124016461-124016561 ( 70) GGAGCAGGAACTTGGGAGAGA 1 chr1:24790962-24791062 ( 57) AGTGGTGGGACCTGCGGAGGA 1 chr2:121832313-121832413 ( 42) ATGGCAGGAGCTGGCTGCAGG 1 chr7:2671095-2671195 ( 28) ATGGGCGGGGATGCGAGTGGA 1 chr2:71333461-71333561 ( 73) GGAGGTGGAAGTTGCAGTGAG 1 chr20:34042430-34042530 ( 78) GGCGCAGGGCCTCCCGCCATG 1 chr2:85640636-85640736 ( 40) GCGGGAGAGGGTGGGTCCGTG 1 chr17:47492155-47492255 ( 35) AGCGGCGGGCCCGCGGAGAAA 1 chr22:50311122-50311222 ( 62) AGGGGTGCAGCCCCAGGTAAG 1 chr19:14062862-14062962 ( 80) CGGGGCGGGAATACGGCAACG 1 chr3:52188342-52188442 ( 47) GGACGACGGGCTGGTGGGGTG 1 chr12:107487425-10748752 ( 78) GAGCACGGGGATGCGGGGAGC 1 chr15:52553905-52554005 ( 4) AGGGAAGGGACTGGCAGTGGC 1 chr17:19140613-19140713 ( 71) ACCAGCGGGGCGGCAGGGGCG 1 chr3:173302501-173302601 ( 77) AGGAGAGGAGGCAGCGGTGCC 1 chr10:103985677-10398577 ( 22) TACGACGGGACTTGGGGCGGG 1 chr11:119341733-11934183 ( 78) CGGGCAGGAGCAAGGCAGAGG 1 chr4:186049448-186049548 ( 1) GGCGCCGGGACCCCGACGCAC 1 chr19:17952507-17952607 ( 23) GAGGCTGCGAAGCGGGGCAGG 1 chr12:56139205-56139305 ( 10) GGTAGAGGGAACTAGGGCAGG 1 chr5:1883760-1883860 ( 53) GGAAGAGGGGACCGAGCGCCC 1 chr19:48116380-48116480 ( 34) AGGGGAGAGGGGTGGGGAGTA 1 chr2:167241218-167241318 ( 55) AGAGGTGGAGGTTGCAGTAAG 1 chr1:6208587-6208687 ( 4) CGGCGCGGGGCGGGCGGAACA 1 chr14:38875005-38875105 ( 45) ATAAGAGGAGGGTTGGGCAGG 1 chr20:44844526-44844626 ( 71) GGGACAGAGGGGTTGGCTGGG 1 chr19:42746712-42746812 ( 16) TGCGGTGAGGGCGTGGCGACG 1 chr16:10837828-10837928 ( 3) GTGGGAGGGAGGGGGCGGGAT 1 chr17:46936528-46936628 ( 65) GGAGACGGAGGTTGCAGTGAG 1 chr9:35814973-35815073 ( 8) GCAGCAGGTGGCGGAGCCCCG 1 chr2:177314626-177314726 ( 61) GATGGTGGAAAGTCGGGGAGG 1 chr10:94821683-94821783 ( 6) GGAAGCGCGAGCCCTGCGGGC 1 chr1:46713116-46713216 ( 47) AGAGGCGGGAATAGTGCTGCG 1 chr22:37882375-37882475 ( 39) GGGGGAGTGGACGGTGCTGGA 1 chr7:73038804-73038904 ( 69) CGGGAAGGGAGATGGGGCCAA 1 chrX:48931560-48931660 ( 70) CCGCGCGGGGGTGGATGGCAG 1 chr5:145235468-145235568 ( 59) GCGCCAGGACACTGGGAGAGG 1 chr17:36452705-36452805 ( 60) GGACGCGCACGTGCTCGCGGG 1 chr19:2456962-2457062 ( 68) GGGCGTGGTGGCTCACGCCTG 1 chr1:162760073-162760173 ( 43) CCTGGTGGGGGCGTCACCCGG 1 chr11:75118007-75118107 ( 56) AGGGGCCGAGGCAGGCGGATC 1 chr7:30785632-30785732 ( 66) AGGCGCGGTGGCTCACGCCTG 1 chr19:19303300-19303400 ( 6) AGGTGAGCGGGCGCAGGCGTA 1 chr8:38039119-38039219 ( 7) GGAGGCGGTGGTCGCAGTGAC 1 chr12:120633072-12063317 ( 24) GTAGCTGGGACTACAGGCATG 1 chr1:205345095-205345195 ( 17) GCGGGTGGGGAGAGATGCGGC 1 chr2:47629402-47629502 ( 41) AAGGGAGGCAGTCGGAGAGGG 1 chr14:94492413-94492513 ( 57) GAAGCCGGGACGCGGGACGTC 1 chr14:77314977-77315077 ( 32) CGAGGAAAGGGTGGGTGCGGG 1 chr5:169611740-169611840 ( 14) ATGGGAGAGAGATGTGGGGAG 1 chr12:48206339-48206439 ( 28) GGCGCAGCGGACGTCCCGGAC 1 chr19:54410601-54410701 ( 19) GGCGACGGAGGCACACGGCAG 1 chr3:5164071-5164171 ( 14) GCAGGCGGGAGATGAGCGCCA 1 chr16:24266782-24266882 ( 7) AGCGGAGGAACCGGGTCGTGC 1 chr19:17320118-17320218 ( 61) ACCGGTGATCGTGGGGGCGGG 1 chr11:67348823-67348923 ( 42) GCTGCAGGAGACTAGGGCGTG 1 chr19:48248434-48248534 ( 77) GAGGGTGGGAAATCTGCGCGC 1 chr1:16532830-16532930 ( 51) GCTGGCGCGACTGTCCGCGCG 1 chr19:53038733-53038833 ( 31) GGGCGCGCAAACCCCGAGGCG 1 chr6:31587568-31587668 ( 76) AGCGGAGAGACGTTGGGACGC 1 chr19:51142437-51142537 ( 15) GCGAGCGCGAGACCTGCCGGG 1 chr11:69453679-69453779 ( 17) GGGCGCGGCGCTGTTACTAGG 1 chr3:11313745-11313845 ( 71) AGCGGCGCGCGTGCGCAAAGG 1 chr11:33182894-33182994 ( 31) GCCGGCCGAGGAGGAGGTGTG 1 chr8:11626946-11627046 ( 51) GACGGAGGCCGCATGGGCCGC 1 chr16:68482359-68482459 ( 80) CGCGGAGTGGGCTCACGCCGC 1 chr15:74286239-74286339 ( 22) CCGGCAGGACGTGGCACGAAG 1 chr9:129317458-129317558 ( 12) TTAGCCGGGCGTGTTGGCGCG 1 chr19:53072925-53073025 ( 57) GAAGGTCGCACCGCGGCGGTG 1 chr19:51611117-51611217 ( 39) TGTTGCGGTGCCGTGGGAGGG 1 chr1:6579940-6580040 ( 23) GGAAGAGCGGTAGCCGCCGAG 1 chr16:29984694-29984794 ( 3) CGGGGCGAGCGCATGCGCTGC 1 chr5:131831876-131831976 ( 8) CCGGCAAGGGACGCAACGCGG 1 chr22:38054254-38054354 ( 69) CGGCGTTGAAACTCGGCGGCG 1 chr12:110011159-11001125 ( 80) CGCGCCGAAGCCGGAGCAGCT 1 chr3:179322293-179322393 ( 1) GACGCCGGAAGTGACGCTATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRGGMGGGGSYKSGGGSRGG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 46560 bayes= 8.44305 E= 1.7e-056 -9 -36 115 -238 -147 -100 156 -138 -2 -58 115 -205 -129 -78 165 -338 -238 8 160 -1392 41 92 -1392 -38 -338 -285 201 -537 -179 -85 175 -437 5 -236 145 -257 5 -92 137 -1392 -47 85 69 -437 -105 100 -100 12 -147 -58 100 8 -338 29 112 -52 -57 -26 122 -168 -113 -65 155 -238 -157 22 146 -1392 -147 69 74 -92 12 -26 110 -379 -73 -78 127 -92 -147 -12 153 -379 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRGGMGGGGSYKSGGGSRGG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 155 E= 1.7e-056 0.251613 0.180645 0.516129 0.051613 0.096774 0.116129 0.683871 0.103226 0.264516 0.154839 0.516129 0.064516 0.109677 0.135484 0.729032 0.025806 0.051613 0.245161 0.703226 0.000000 0.354839 0.438710 0.000000 0.206452 0.025806 0.032258 0.935484 0.006452 0.077419 0.129032 0.780645 0.012903 0.277419 0.045161 0.632258 0.045161 0.277419 0.122581 0.600000 0.000000 0.193548 0.419355 0.374194 0.012903 0.129032 0.464516 0.116129 0.290323 0.096774 0.154839 0.464516 0.283871 0.025806 0.283871 0.503226 0.187097 0.180645 0.193548 0.541935 0.083871 0.122581 0.148387 0.677419 0.051613 0.090323 0.270968 0.638710 0.000000 0.096774 0.374194 0.387097 0.141935 0.290323 0.193548 0.496774 0.019355 0.161290 0.135484 0.561290 0.141935 0.096774 0.212903 0.670968 0.019355 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRGGMGGGGSYKSGGGSRGG MEME-1 regular expression -------------------------------------------------------------------------------- [GA]G[GA]G[GC][CAT]GG[GA][GA][CG][CT][GT][GC]GG[GC][GC][GA]G[GC] -------------------------------------------------------------------------------- Time 307.58 secs. ******************************************************************************** ******************************************************************************** MOTIF WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW MEME-2 width = 30 sites = 94 llr = 1043 E-value = 2.4e-055 ******************************************************************************** -------------------------------------------------------------------------------- Motif WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW MEME-2 Description -------------------------------------------------------------------------------- Simplified A 4154433311:1232225143422334414 pos.-specific C 2::1212::2121:1:::11:1:1111:1: probability G 21231:1:211:1:221:21:112211:2: matrix T 283236477687675675647576554666 bits 2.1 1.9 1.7 1.5 Relative 1.3 Entropy 1.1 * * * * (16.0 bits) 0.8 * * ** * ** * * * * 0.6 * * ** ** * *** * * * * 0.4 ** * ******* **** *** *** 0.2 *** ************************* 0.0 ------------------------------ Multilevel ATAAATTTTTTTTTTTTATTTTTTTTATTT consensus T TGTAAA C CAAGGAT AAA AATA A sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr5:88579566-88579666 + 71 3.15e-13 TGAGGCTCCA GTAGGttttttttttttttttttttttttt chr18:29320101-29320201 - 18 1.36e-12 TGCCCGGCTA ATTTTTTTTTTTTTTTTTTTTTTTGTATTT TTGGTAGAGA chr20:36981463-36981563 + 27 5.19e-12 atgtaggctg cttccttttttttttttttttttttttttt gctactgcct chr9:110101613-110101713 + 71 7.00e-11 TATATGAAAT CAAAACtttttttttttttttttttttttt chr4:323907-324007 + 39 1.64e-10 tatatctagt ataactcttgttgttttatatattttatta cactggaaca chr16:89859546-89859646 + 64 3.03e-10 tatatctggt ataactattcttgttttatattttattata ctagaac chr17:26368046-26368146 - 55 3.70e-10 CTCCTCTTTT CTTCTTCTTCTTTTATTATTTATTTTTTTT TTTTTGGCAG chr15:35272232-35272332 - 9 8.00e-10 CTCAAATTGC ATTGGTAATTTTTTTTTTTTTTTTGTAAGT TAAAAAAA chr1:53651033-53651133 + 70 1.16e-09 tatttctagt ataactattcttattgtatatattttcttt a chr8:38039119-38039219 - 71 2.00e-09 . TTTTTTTTTTTTTTTTTTTTTTTTGAGATA GTCTCGCTAG chr17:56668244-56668344 - 21 6.64e-09 GAAAATGTCC AGACATTTTATTTATTTATTTTTTATATTT TTGAAATGGA chr5:85600915-85601015 - 67 9.20e-09 ATTT CTTGTTTTTCTCTTTATATATTTTGCATTT TAATATATTG chr6:15622974-15623074 - 20 2.02e-08 AGCCTTGTCT TTGAATTTTCTCTTAGTTTATTTTATATGA CCTATTTTTA chr8:95514722-95514822 - 26 2.02e-08 TTCATAGACA TTAATTTTTTTCATTGTATATAATTCAATA CTATCCTTAC chr14:100365525-10036562 + 59 4.27e-08 TTGAATGGGT CTTTCAATTTTTTTTTTTTTAATGTTAAAT GGCTTTGAAA chr9:135915792-135915892 - 54 4.93e-08 TCTAGATCTA GTATAACTTGTTGTTTTATGTATTTTATTA TACTGGAACA chr22:33232049-33232149 + 53 5.69e-08 GAGGGCAGCA GTTAGCATTCTTTACTTATTTATTTTATTT AAAATGAAGG chr19:48444292-48444392 - 13 6.56e-08 TGCTGCTGCT GTTATTGTTGTTGTTGTTGTATTTTATTTT GTAGCATCCT chr11:65610749-65610849 - 68 1.14e-07 TCT ATAATCCATTTTCTTTTTCTTTTTCTTTTT CTTTTGAGAC chr7:20351078-20351178 + 61 1.31e-07 CCGCCACCTA AAGGTTTATTTCTTGTTTTATTTTACATGA GACCTACTAT chr3:172526751-172526851 + 50 1.70e-07 AAACATTAAC AGAAAATTTTTCTTATAATCTATTGAATTA CTAGCCACAT chr15:40999708-40999808 + 2 2.52e-07 t gttgttgttggtttgtttgtttgtttttta aagacagagt chr7:77307787-77307887 + 6 2.86e-07 ATCTG AATAGTTTGTTCTTTATATCTTTTTATATA TACCCTTTAG chr5:44432130-44432230 - 64 3.24e-07 GCTTATA ATAACAAAGGTTTAGATTTAATTTATATTA CATGTCCTCT chr6:49420705-49420805 - 24 3.67e-07 ATGTAGAATT TTAATAAAGTTATATATATATATTTTTTCT GAGCAATGTG chr15:99124388-99124488 + 30 4.15e-07 AAAACTCAAC TTTCCTTTTTGTGATATATATATTTATATA TCCTTAAGAC chrX:119609129-119609229 - 68 5.97e-07 TTA AGAATATTTTTTATGTTTGTAAATTATAGT ACAGCTACAC chr8:119750272-119750372 + 65 6.72e-07 ccaaatacct ataataaatctcttattatataaatcttct agtggt chr19:1357735-1357835 - 38 7.56e-07 AAGAACCCTG GTGAATGGTTTTTTTTTTTTTTTCCTTTTA AGACAGAAAA chr11:49250489-49250589 + 55 9.53e-07 CATTGATACT TTATTTTTCTTCTTCTTATGTTTTGTATTA CCCTGACTTA chr15:99189795-99189895 - 48 9.53e-07 GATGCCAGTA ATAAATTTTTTTAAGATAGCTAATAAAAGA GTTGTGAATT chr15:93481240-93481340 + 30 1.07e-06 atgtacctga ttatttcattttgaattatttaaaaaaatt tgtgaaaatt chr2:211264250-211264350 - 2 1.20e-06 GATGCTATGT TTAACTTAGTTTTACTTTCTATTTTGTTTA A chr8:86260292-86260392 - 22 1.20e-06 ATCCTCATTT AGAAAATATTTTTAGGTATTTTATACTTAT TAACCCAGTT chr5:90540340-90540440 - 52 1.34e-06 AGAGGAAAAG GTACATCTGTTTTTTGTTTCTCTTCCTTTT TCCTGATACA chr16:66791928-66792028 - 15 1.50e-06 TTGCACCTGG CTGAATATATTTAATTTTTAAATGAACTTA AATTTCATAT chr12:57693033-57693133 + 58 1.86e-06 GCTCTCTCTT ATAGATTAGTGTTATTTTGCTAATTAAACT GTTTTAGTTT chr13:91730153-91730253 - 37 2.30e-06 ATAGTAAGTC AAAGAAGTTCTTTTGGTAGAAATGAAAATA CAAAAACTTA chr13:37648659-37648759 + 59 2.30e-06 CTGTAAAGGA GTAGAAAATTCTTTATTATTAATGAGATGT CATTACTAGG chr5:60763496-60763596 + 38 2.56e-06 AAAGGTTTAT ATAATTTATGTTTTAGTTCTACAGTTAATT ATCTGTGTTT chr2:32360029-32360129 + 19 2.84e-06 gccaccacgc ctggctaattttttgtatttttagtagaga cgaggtttca chr20:45497044-45497144 + 68 2.84e-06 acactctccc atattttatgttataattgttatacgtttt cag chr7:14755677-14755777 - 59 2.84e-06 CAGAATCATC CGAAGTTTGGTTTTCTTTCTTTTTCTTTTT TAATGCCAAT chr10:116930999-11693109 + 3 3.49e-06 TG TTAGATTTTGTCCTTTAATATTTAAGCTTA CCTTTTTAAC chr5:101871835-101871935 - 56 3.49e-06 TACTTTTTGT CTGAACATTCTTATTTTATTTTGAATCATA TTTCTCAATA chr9:118874557-118874657 + 53 3.49e-06 CCTACCAGTA GTGGATTATTTCCTTTGATAAATGTTCATT GAGTGTTCAT chr1:104003614-104003714 - 45 3.86e-06 CACTGAGGGT CTAAGATATTTTAAGTTTAATAGTACAATT ATACCACTGT chr11:64868160-64868260 - 62 3.86e-06 TTCCACTGT GTGGATATTTGTTTATATTCATTCAATTGA TGGCCATTTG chrX:101013449-101013549 + 67 4.27e-06 TTTTCCAGAC ATGAACATTTTTCAAATATATTTTGGATCA TATT chr11:89350128-89350228 + 71 4.72e-06 TGTCTACAAA CAAGGTGATGTTTTATATTAATTCTCTTTT chr12:57623022-57623122 + 3 4.72e-06 CA CTGGACCTCTGTTTTTGTTTTTTGTTTTTT TCCCCCCAGG chr13:44468611-44468711 + 40 5.21e-06 AAAAAATCAA CTTTATTTTTTCTAGGTTTAAAAAAATAGA ACCAGCTATT chr17:36021684-36021784 + 18 5.21e-06 AAGTCAATTG GTTGATTTTCTCTTTTGATGATTGCTTTAT ATTTCACAAC chr6:32838916-32839016 + 55 5.74e-06 aaaatggact ttacttcttctcttgagttatttaaattat aggattgaag chr6:20563820-20563920 + 68 6.95e-06 acaaatgtga ggtaatatgtttttggaaatatttataagt tta chr12:40024489-40024589 + 59 6.95e-06 agtttagcat ttgtctcagtgtttgttttttaactaaata taaactacca chr9:118914151-118914251 - 63 7.64e-06 ACTGGGAC ATACATGTAATATATTTTTTTCTTCTTTTT TCCCCCTCTT chr2:211113186-211113286 - 50 8.39e-06 ACTCTATTGC CATCTTCTGGTTTTATTATAAAATGCATTT TATAAATGTT chr4:127144451-127144551 + 40 8.39e-06 GATGTGCTGA ATAAACATTTCTAATGTAGGTATGTATATA CAGTTTTTCA chr10:64763605-64763705 - 26 8.39e-06 ACAAACAATT TTGGCTTAGTTTTTGGTTGCTATTGCTAAT GGCCCTGTTT chr9:88401148-88401248 + 8 1.01e-05 ACATTGA ATAATAGAACTTTTAGTAGATATGTAAAAA GATTCCTTTT chr2:225151043-225151143 + 33 1.01e-05 TGACTATCCA ATAAAAATGTGTATTTTAAAAGTATGTTTA TACCAGGTTC chr5:126872226-126872326 - 71 1.10e-05 . TTATATATTAGTTTCAATGAATTTTAGTTT TGAGCTTGAA chr1:160716616-160716716 + 42 1.10e-05 ctgcctcaCC TTTAAGGATTTAGTCTTAGTTTTTGTATTT CTATCAGCCT chr6:27618323-27618423 + 48 1.32e-05 AGGTTTGGCT GTAGAAAATCTATATTTTTTACTCAGATTT TTTTTTTCTG chrX:84339310-84339410 - 8 1.32e-05 TCAAAATTTC TTAAAAGTCTTCAAGATTTTAATTTATTCA CAACTTA chr1:204570708-204570808 - 51 1.57e-05 ACACAAAGGA TTAGAAAATTTTATGTAAGTACTATTGTCA TGTCATTTTA chr3:63218084-63218184 - 8 1.57e-05 GTAGCATATC AAAATTTTTAGTTTTGAACAATTCTTTTAT AAGAATC chr7:143260158-143260258 + 2 1.57e-05 a aatttttttttcttgtaatctgtgaattca gagaacgaat chr11:96159239-96159339 + 36 1.72e-05 GATATCCCTG TTTCCATTTTGTTTTATAGATGGTTTGATT CTAACTTCAT chr4:158138512-158138612 + 3 2.03e-05 TT CTTTTATTTTTTATTGTAACTTACAATTCT TGCAGCGGAA chr13:99518695-99518795 - 71 2.03e-05 . TTAAGTATTTCCTATATAATTTGATCAATT TTTAAACTTG chr8:145792171-145792271 + 28 2.03e-05 tataccagat atagatcttagatatgattatatatgaata tcattgatca chr11:100726203-10072630 + 58 2.03e-05 AATTACCATA ATAAGGTATCTTCAATAATTTATCTTATCA ATATTTAGGG chr3:154052544-154052644 + 50 2.21e-05 TCACCACCAG ATGGTGATATTTTTATTAGGTAATAAGTTT TTGCCTTCAG chr18:31331140-31331240 + 39 2.21e-05 ATGATCCCTT AGAAGAATTGCTTTGGTTAATTTTTTAAAA TCCTACATGA chr9:104220281-104220381 + 3 2.21e-05 GA ATTACAGATTTTTAAAAAATTATTTACAGT TTTCTGTATT chr1:243654586-243654686 - 2 2.61e-05 AACATTCCCT CTACCAAATTTCTTTTGTCATGTTCATATT A chr8:86169330-86169430 - 52 2.61e-05 CCAGCCTTAA ATTTGACTTTTTAAAAATTGTTGGTAATTT GCTAACCCTG chr7:30785632-30785732 + 18 2.83e-05 catacgaatc tagaattatcttgaaataaaaagttttatt aaaagaGTGT chr1:202432924-202433024 + 65 3.06e-05 ctgtcttagg attggtttactaattaattaaatggtatgt tgttgc chr17:9479136-9479236 + 27 3.06e-05 ACAGGGGCCC AAAGAAGTATCAATTATATATATTTTTTAT AGCAGCCTTC chr1:157131696-157131796 - 6 3.31e-05 TATTTTACCC CAAAATATATTTCTTTGACATATTTTGAAA TGGCC chr11:71459770-71459870 + 10 3.31e-05 gcactgtaa aaactttttgttctgttagctgatgtttgt agcccccagt chr16:23342451-23342551 + 59 3.59e-05 tacccaccac caggtccagctaatttttgtatttttttta gtagatccgc chr15:63032607-63032707 + 47 3.87e-05 TTAAGTAGCA TTATATCTTTCTGATTATAAAATAGTATAT ATGCTTCTTG chr20:524254-524354 + 50 4.18e-05 GAGACTTGCA ATAGTTAAGCGCATTTTATTTCAATAGTGT TAACAAGTGA chr9:12699586-12699686 + 66 4.51e-05 TTTCATCATA ATTTTTCTTGTCAATTAATATAACAAGTCT CCTAA chr14:31031290-31031390 - 24 5.24e-05 TAGAGCGAGG ATTATTATAATATTGGAATAAAGAGTAATT GCTACAAACT chr15:79630525-79630625 - 9 5.24e-05 TAGAGCAAGG ATTATTATAATATTGGAATAAAGAGTAATT GCTACCAA chr7:87799083-87799183 + 29 7.00e-05 ATTAAATTAT GTGTCTATTTGCCTTTATTGATTAGAATGA AAATCACTTT chr6:4008655-4008755 - 55 8.05e-05 AGTTATTGGC TGGGAATTTTTTGTATATCTATGTACATCT TCCATAAGAG chr2:111891186-111891286 - 41 1.06e-04 TTAGACTTAC ATATATTATCTTAAATGTAAATGGTCTAGA CCATTTAAGA chr21:40421220-40421320 - 4 1.37e-04 GTGTGTGTGT GTGTGTGTGTGTGTGTGTGTATATATATAT ATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:88579566-88579666 3.1e-13 70_[+2] chr18:29320101-29320201 1.4e-12 17_[-2]_53 chr20:36981463-36981563 5.2e-12 26_[+2]_44 chr9:110101613-110101713 7e-11 70_[+2] chr4:323907-324007 1.6e-10 38_[+2]_32 chr16:89859546-89859646 3e-10 63_[+2]_7 chr17:26368046-26368146 3.7e-10 54_[-2]_16 chr15:35272232-35272332 8e-10 8_[-2]_62 chr1:53651033-53651133 1.2e-09 69_[+2]_1 chr8:38039119-38039219 2e-09 70_[-2] chr17:56668244-56668344 6.6e-09 20_[-2]_50 chr5:85600915-85601015 9.2e-09 66_[-2]_4 chr6:15622974-15623074 2e-08 19_[-2]_51 chr8:95514722-95514822 2e-08 25_[-2]_45 chr14:100365525-10036562 4.3e-08 58_[+2]_12 chr9:135915792-135915892 4.9e-08 53_[-2]_17 chr22:33232049-33232149 5.7e-08 52_[+2]_18 chr19:48444292-48444392 6.6e-08 12_[-2]_58 chr11:65610749-65610849 1.1e-07 67_[-2]_3 chr7:20351078-20351178 1.3e-07 60_[+2]_10 chr3:172526751-172526851 1.7e-07 49_[+2]_21 chr15:40999708-40999808 2.5e-07 1_[+2]_69 chr7:77307787-77307887 2.9e-07 5_[+2]_65 chr5:44432130-44432230 3.2e-07 63_[-2]_7 chr6:49420705-49420805 3.7e-07 23_[-2]_47 chr15:99124388-99124488 4.2e-07 29_[+2]_41 chrX:119609129-119609229 6e-07 67_[-2]_3 chr8:119750272-119750372 6.7e-07 64_[+2]_6 chr19:1357735-1357835 7.6e-07 37_[-2]_33 chr11:49250489-49250589 9.5e-07 54_[+2]_16 chr15:99189795-99189895 9.5e-07 47_[-2]_23 chr15:93481240-93481340 1.1e-06 29_[+2]_41 chr2:211264250-211264350 1.2e-06 1_[-2]_69 chr8:86260292-86260392 1.2e-06 21_[-2]_49 chr5:90540340-90540440 1.3e-06 51_[-2]_19 chr16:66791928-66792028 1.5e-06 14_[-2]_56 chr12:57693033-57693133 1.9e-06 57_[+2]_13 chr13:91730153-91730253 2.3e-06 36_[-2]_34 chr13:37648659-37648759 2.3e-06 58_[+2]_12 chr5:60763496-60763596 2.6e-06 37_[+2]_33 chr2:32360029-32360129 2.8e-06 18_[+2]_52 chr20:45497044-45497144 2.8e-06 67_[+2]_3 chr7:14755677-14755777 2.8e-06 58_[-2]_12 chr10:116930999-11693109 3.5e-06 2_[+2]_68 chr5:101871835-101871935 3.5e-06 55_[-2]_15 chr9:118874557-118874657 3.5e-06 52_[+2]_18 chr1:104003614-104003714 3.9e-06 44_[-2]_26 chr11:64868160-64868260 3.9e-06 61_[-2]_9 chrX:101013449-101013549 4.3e-06 66_[+2]_4 chr11:89350128-89350228 4.7e-06 70_[+2] chr12:57623022-57623122 4.7e-06 2_[+2]_68 chr13:44468611-44468711 5.2e-06 39_[+2]_31 chr17:36021684-36021784 5.2e-06 17_[+2]_53 chr6:32838916-32839016 5.7e-06 54_[+2]_16 chr6:20563820-20563920 7e-06 67_[+2]_3 chr12:40024489-40024589 7e-06 58_[+2]_12 chr9:118914151-118914251 7.6e-06 62_[-2]_8 chr2:211113186-211113286 8.4e-06 49_[-2]_21 chr4:127144451-127144551 8.4e-06 39_[+2]_31 chr10:64763605-64763705 8.4e-06 25_[-2]_45 chr9:88401148-88401248 1e-05 7_[+2]_63 chr2:225151043-225151143 1e-05 32_[+2]_38 chr5:126872226-126872326 1.1e-05 70_[-2] chr1:160716616-160716716 1.1e-05 41_[+2]_29 chr6:27618323-27618423 1.3e-05 47_[+2]_23 chrX:84339310-84339410 1.3e-05 7_[-2]_63 chr1:204570708-204570808 1.6e-05 50_[-2]_20 chr3:63218084-63218184 1.6e-05 7_[-2]_63 chr7:143260158-143260258 1.6e-05 1_[+2]_69 chr11:96159239-96159339 1.7e-05 35_[+2]_35 chr4:158138512-158138612 2e-05 2_[+2]_68 chr13:99518695-99518795 2e-05 70_[-2] chr8:145792171-145792271 2e-05 27_[+2]_43 chr11:100726203-10072630 2e-05 57_[+2]_13 chr3:154052544-154052644 2.2e-05 49_[+2]_21 chr18:31331140-31331240 2.2e-05 38_[+2]_32 chr9:104220281-104220381 2.2e-05 2_[+2]_68 chr1:243654586-243654686 2.6e-05 1_[-2]_69 chr8:86169330-86169430 2.6e-05 51_[-2]_19 chr7:30785632-30785732 2.8e-05 17_[+2]_53 chr1:202432924-202433024 3.1e-05 64_[+2]_6 chr17:9479136-9479236 3.1e-05 26_[+2]_44 chr1:157131696-157131796 3.3e-05 5_[-2]_65 chr11:71459770-71459870 3.3e-05 9_[+2]_61 chr16:23342451-23342551 3.6e-05 58_[+2]_12 chr15:63032607-63032707 3.9e-05 46_[+2]_24 chr20:524254-524354 4.2e-05 49_[+2]_21 chr9:12699586-12699686 4.5e-05 65_[+2]_5 chr14:31031290-31031390 5.2e-05 23_[-2]_47 chr15:79630525-79630625 5.2e-05 8_[-2]_62 chr7:87799083-87799183 7e-05 28_[+2]_42 chr6:4008655-4008755 8.1e-05 54_[-2]_16 chr2:111891186-111891286 0.00011 40_[-2]_30 chr21:40421220-40421320 0.00014 3_[-2]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW width=30 seqs=94 chr5:88579566-88579666 ( 71) GTAGGTTTTTTTTTTTTTTTTTTTTTTTTT 1 chr18:29320101-29320201 ( 18) ATTTTTTTTTTTTTTTTTTTTTTTGTATTT 1 chr20:36981463-36981563 ( 27) CTTCCTTTTTTTTTTTTTTTTTTTTTTTTT 1 chr9:110101613-110101713 ( 71) CAAAACTTTTTTTTTTTTTTTTTTTTTTTT 1 chr4:323907-324007 ( 39) ATAACTCTTGTTGTTTTATATATTTTATTA 1 chr16:89859546-89859646 ( 64) ATAACTATTCTTGTTTTATATTTTATTATA 1 chr17:26368046-26368146 ( 55) CTTCTTCTTCTTTTATTATTTATTTTTTTT 1 chr15:35272232-35272332 ( 9) ATTGGTAATTTTTTTTTTTTTTTTGTAAGT 1 chr1:53651033-53651133 ( 70) ATAACTATTCTTATTGTATATATTTTCTTT 1 chr8:38039119-38039219 ( 71) TTTTTTTTTTTTTTTTTTTTTTTTGAGATA 1 chr17:56668244-56668344 ( 21) AGACATTTTATTTATTTATTTTTTATATTT 1 chr5:85600915-85601015 ( 67) CTTGTTTTTCTCTTTATATATTTTGCATTT 1 chr6:15622974-15623074 ( 20) TTGAATTTTCTCTTAGTTTATTTTATATGA 1 chr8:95514722-95514822 ( 26) TTAATTTTTTTCATTGTATATAATTCAATA 1 chr14:100365525-10036562 ( 59) CTTTCAATTTTTTTTTTTTTAATGTTAAAT 1 chr9:135915792-135915892 ( 54) GTATAACTTGTTGTTTTATGTATTTTATTA 1 chr22:33232049-33232149 ( 53) GTTAGCATTCTTTACTTATTTATTTTATTT 1 chr19:48444292-48444392 ( 13) GTTATTGTTGTTGTTGTTGTATTTTATTTT 1 chr11:65610749-65610849 ( 68) ATAATCCATTTTCTTTTTCTTTTTCTTTTT 1 chr7:20351078-20351178 ( 61) AAGGTTTATTTCTTGTTTTATTTTACATGA 1 chr3:172526751-172526851 ( 50) AGAAAATTTTTCTTATAATCTATTGAATTA 1 chr15:40999708-40999808 ( 2) GTTGTTGTTGGTTTGTTTGTTTGTTTTTTA 1 chr7:77307787-77307887 ( 6) AATAGTTTGTTCTTTATATCTTTTTATATA 1 chr5:44432130-44432230 ( 64) ATAACAAAGGTTTAGATTTAATTTATATTA 1 chr6:49420705-49420805 ( 24) TTAATAAAGTTATATATATATATTTTTTCT 1 chr15:99124388-99124488 ( 30) TTTCCTTTTTGTGATATATATATTTATATA 1 chrX:119609129-119609229 ( 68) AGAATATTTTTTATGTTTGTAAATTATAGT 1 chr8:119750272-119750372 ( 65) ATAATAAATCTCTTATTATATAAATCTTCT 1 chr19:1357735-1357835 ( 38) GTGAATGGTTTTTTTTTTTTTTTCCTTTTA 1 chr11:49250489-49250589 ( 55) TTATTTTTCTTCTTCTTATGTTTTGTATTA 1 chr15:99189795-99189895 ( 48) ATAAATTTTTTTAAGATAGCTAATAAAAGA 1 chr15:93481240-93481340 ( 30) TTATTTCATTTTGAATTATTTAAAAAAATT 1 chr2:211264250-211264350 ( 2) TTAACTTAGTTTTACTTTCTATTTTGTTTA 1 chr8:86260292-86260392 ( 22) AGAAAATATTTTTAGGTATTTTATACTTAT 1 chr5:90540340-90540440 ( 52) GTACATCTGTTTTTTGTTTCTCTTCCTTTT 1 chr16:66791928-66792028 ( 15) CTGAATATATTTAATTTTTAAATGAACTTA 1 chr12:57693033-57693133 ( 58) ATAGATTAGTGTTATTTTGCTAATTAAACT 1 chr13:91730153-91730253 ( 37) AAAGAAGTTCTTTTGGTAGAAATGAAAATA 1 chr13:37648659-37648759 ( 59) GTAGAAAATTCTTTATTATTAATGAGATGT 1 chr5:60763496-60763596 ( 38) ATAATTTATGTTTTAGTTCTACAGTTAATT 1 chr2:32360029-32360129 ( 19) CTGGCTAATTTTTTGTATTTTTAGTAGAGA 1 chr20:45497044-45497144 ( 68) ATATTTTATGTTATAATTGTTATACGTTTT 1 chr7:14755677-14755777 ( 59) CGAAGTTTGGTTTTCTTTCTTTTTCTTTTT 1 chr10:116930999-11693109 ( 3) TTAGATTTTGTCCTTTAATATTTAAGCTTA 1 chr5:101871835-101871935 ( 56) CTGAACATTCTTATTTTATTTTGAATCATA 1 chr9:118874557-118874657 ( 53) GTGGATTATTTCCTTTGATAAATGTTCATT 1 chr1:104003614-104003714 ( 45) CTAAGATATTTTAAGTTTAATAGTACAATT 1 chr11:64868160-64868260 ( 62) GTGGATATTTGTTTATATTCATTCAATTGA 1 chrX:101013449-101013549 ( 67) ATGAACATTTTTCAAATATATTTTGGATCA 1 chr11:89350128-89350228 ( 71) CAAGGTGATGTTTTATATTAATTCTCTTTT 1 chr12:57623022-57623122 ( 3) CTGGACCTCTGTTTTTGTTTTTTGTTTTTT 1 chr13:44468611-44468711 ( 40) CTTTATTTTTTCTAGGTTTAAAAAAATAGA 1 chr17:36021684-36021784 ( 18) GTTGATTTTCTCTTTTGATGATTGCTTTAT 1 chr6:32838916-32839016 ( 55) TTACTTCTTCTCTTGAGTTATTTAAATTAT 1 chr6:20563820-20563920 ( 68) GGTAATATGTTTTTGGAAATATTTATAAGT 1 chr12:40024489-40024589 ( 59) TTGTCTCAGTGTTTGTTTTTTAACTAAATA 1 chr9:118914151-118914251 ( 63) ATACATGTAATATATTTTTTTCTTCTTTTT 1 chr2:211113186-211113286 ( 50) CATCTTCTGGTTTTATTATAAAATGCATTT 1 chr4:127144451-127144551 ( 40) ATAAACATTTCTAATGTAGGTATGTATATA 1 chr10:64763605-64763705 ( 26) TTGGCTTAGTTTTTGGTTGCTATTGCTAAT 1 chr9:88401148-88401248 ( 8) ATAATAGAACTTTTAGTAGATATGTAAAAA 1 chr2:225151043-225151143 ( 33) ATAAAAATGTGTATTTTAAAAGTATGTTTA 1 chr5:126872226-126872326 ( 71) TTATATATTAGTTTCAATGAATTTTAGTTT 1 chr1:160716616-160716716 ( 42) TTTAAGGATTTAGTCTTAGTTTTTGTATTT 1 chr6:27618323-27618423 ( 48) GTAGAAAATCTATATTTTTTACTCAGATTT 1 chrX:84339310-84339410 ( 8) TTAAAAGTCTTCAAGATTTTAATTTATTCA 1 chr1:204570708-204570808 ( 51) TTAGAAAATTTTATGTAAGTACTATTGTCA 1 chr3:63218084-63218184 ( 8) AAAATTTTTAGTTTTGAACAATTCTTTTAT 1 chr7:143260158-143260258 ( 2) AATTTTTTTTTCTTGTAATCTGTGAATTCA 1 chr11:96159239-96159339 ( 36) TTTCCATTTTGTTTTATAGATGGTTTGATT 1 chr4:158138512-158138612 ( 3) CTTTTATTTTTTATTGTAACTTACAATTCT 1 chr13:99518695-99518795 ( 71) TTAAGTATTTCCTATATAATTTGATCAATT 1 chr8:145792171-145792271 ( 28) ATAGATCTTAGATATGATTATATATGAATA 1 chr11:100726203-10072630 ( 58) ATAAGGTATCTTCAATAATTTATCTTATCA 1 chr3:154052544-154052644 ( 50) ATGGTGATATTTTTATTAGGTAATAAGTTT 1 chr18:31331140-31331240 ( 39) AGAAGAATTGCTTTGGTTAATTTTTTAAAA 1 chr9:104220281-104220381 ( 3) ATTACAGATTTTTAAAAAATTATTTACAGT 1 chr1:243654586-243654686 ( 2) CTACCAAATTTCTTTTGTCATGTTCATATT 1 chr8:86169330-86169430 ( 52) ATTTGACTTTTTAAAAATTGTTGGTAATTT 1 chr7:30785632-30785732 ( 18) TAGAATTATCTTGAAATAAAAAGTTTTATT 1 chr1:202432924-202433024 ( 65) ATTGGTTTACTAATTAATTAAATGGTATGT 1 chr17:9479136-9479236 ( 27) AAAGAAGTATCAATTATATATATTTTTTAT 1 chr1:157131696-157131796 ( 6) CAAAATATATTTCTTTGACATATTTTGAAA 1 chr11:71459770-71459870 ( 10) AAACTTTTTGTTCTGTTAGCTGATGTTTGT 1 chr16:23342451-23342551 ( 59) CAGGTCCAGCTAATTTTTGTATTTTTTTTA 1 chr15:63032607-63032707 ( 47) TTATATCTTTCTGATTATAAAATAGTATAT 1 chr20:524254-524354 ( 50) ATAGTTAAGCGCATTTTATTTCAATAGTGT 1 chr9:12699586-12699686 ( 66) ATTTTTCTTGTCAATTAATATAACAAGTCT 1 chr14:31031290-31031390 ( 24) ATTATTATAATATTGGAATAAAGAGTAATT 1 chr15:79630525-79630625 ( 9) ATTATTATAATATTGGAATAAAGAGTAATT 1 chr7:87799083-87799183 ( 29) GTGTCTATTTGCCTTTATTGATTAGAATGA 1 chr6:4008655-4008755 ( 55) TGGGAATTTTTTGTATATCTATGTACATCT 1 chr2:111891186-111891286 ( 41) ATATATTATCTTAAATGTAAATGGTCTAGA 1 chr21:40421220-40421320 ( 4) GTGTGTGTGTGTGTGTGTGTATATATATAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 41322 bayes= 10.3517 E= 2.4e-055 67 -28 -54 -26 -95 -1320 -145 154 99 -1320 -28 5 67 -99 20 -48 56 -54 -75 20 -7 -145 -286 123 20 -54 -86 59 25 -1320 -444 132 -148 -286 -54 141 -185 -20 -64 110 -1320 -186 -64 155 -133 -13 -1320 135 -33 -145 -99 113 10 -1320 -1320 141 -33 -186 1 87 -48 -1320 -20 118 -26 -1320 -145 137 93 -1320 -1320 87 -133 -145 -28 120 59 -113 -164 63 35 -1320 -1320 130 67 -186 -212 77 -48 -1320 -99 137 -65 -128 -54 110 -1 -145 -45 84 20 -75 -145 81 67 -186 -128 63 43 -1320 -1320 125 -107 -99 -45 113 59 -1320 -1320 115 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 94 E= 2.4e-055 0.425532 0.191489 0.159574 0.223404 0.138298 0.000000 0.085106 0.776596 0.531915 0.000000 0.191489 0.276596 0.425532 0.117021 0.265957 0.191489 0.393617 0.159574 0.138298 0.308511 0.255319 0.085106 0.031915 0.627660 0.308511 0.159574 0.127660 0.404255 0.319149 0.000000 0.010638 0.670213 0.095745 0.031915 0.159574 0.712766 0.074468 0.202128 0.148936 0.574468 0.000000 0.063830 0.148936 0.787234 0.106383 0.212766 0.000000 0.680851 0.212766 0.085106 0.117021 0.585106 0.287234 0.000000 0.000000 0.712766 0.212766 0.063830 0.234043 0.489362 0.191489 0.000000 0.202128 0.606383 0.223404 0.000000 0.085106 0.691489 0.510638 0.000000 0.000000 0.489362 0.106383 0.085106 0.191489 0.617021 0.404255 0.106383 0.074468 0.414894 0.340426 0.000000 0.000000 0.659574 0.425532 0.063830 0.053191 0.457447 0.191489 0.000000 0.117021 0.691489 0.170213 0.095745 0.159574 0.574468 0.265957 0.085106 0.170213 0.478723 0.308511 0.138298 0.085106 0.468085 0.425532 0.063830 0.095745 0.414894 0.361702 0.000000 0.000000 0.638298 0.127660 0.117021 0.170213 0.585106 0.404255 0.000000 0.000000 0.595745 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWRWTWTTTTTTTTTTWTWWWTTWWWWTW MEME-2 regular expression -------------------------------------------------------------------------------- [AT]T[AT][AG][AT][TA][TA][TA]T[TC]T[TC][TA][TA][TGA][TG][TA][AT]T[TA][TA][TA]TT[TA][TA][AT][TA]T[TA] -------------------------------------------------------------------------------- Time 591.98 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTGTAATCCCAGCDWCTBRGRAGRCTSMS MEME-3 width = 30 sites = 13 llr = 332 E-value = 1.3e-035 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCDWCTBRGRAGRCTSMS MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::288:2::a1:25:::4:3a141116: pos.-specific C 78:::::3699::9:27:4::::::92334 probability G 3:3a:22:21::9:31::26a6:96:2515 matrix T :27:8::7::1::1533a4::1::::51:1 bits 2.1 * * 1.9 * * * * * 1.7 * ***** * * ** * 1.5 * * ***** * * ** * Relative 1.3 ** **** ***** * * ** * Entropy 1.1 ******** ***** ** ** **** (36.9 bits) 0.8 ************** ** ******* ** 0.6 ************** ** ******* ** 0.4 *************** ********** *** 0.2 ****************************** 0.0 ------------------------------ Multilevel CCTGTAATCCCAGCTACTCGGGAGGCTGAG consensus G G GGCG GTT TA A A GCCC sequence A G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCDWCTBRGRAGRCTSMS MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr17:46936528-46936628 + 13 1.12e-18 gtagtgggtg cctgtaatcccagctacttgggaggctgag gcacaagaat chr7:105622411-105622511 + 17 2.37e-16 gtggcgggtg cctgtagtcccagctactcaggaggctgag gcaggagaat chr9:129317458-129317558 + 35 3.25e-15 ttggcgcgca cctgtaatcccagctactcagtaggctgag gcaggagaat chr14:100736952-10073705 + 16 1.57e-14 gtggcggaca cctgtagtcccaactactcgggaggctgag gcaggagaat chr1:7939283-7939383 + 28 4.06e-13 atggctcacg cctgtaatcccagtactttaggaggctgag gcaggtggat chr16:23342451-23342551 - 19 1.64e-12 GTGGTGGGTA CTTGTAATAGCAGCTATTTGGGAGGCTGAC GCAGGAGAAT chr16:66791928-66792028 + 64 2.30e-12 atggctcatg cctgaaatcccagcactttgggaggccaag gtgggtg chr1:94316268-94316368 - 23 3.17e-12 CCTTGGTCTA GCGGTAACACCAGCGTCTCGGAAGACGCCC GTTGCCAAGC chr2:95858630-95858730 + 67 7.78e-12 ccttagtcta gcggtgacgccagcgtctgggaagacgccc gtca chr9:130943731-130943831 + 49 7.78e-12 ccttggtcta gcggtgacgccagcgtctgggaagacgccc gttaccaggc chr9:140515347-140515447 + 67 2.21e-11 gtggctcatg cctgtaatcctagcagtttaggaagccgag gtgg chr18:29320101-29320201 + 70 3.15e-11 gtggtatgca cctgaagtcccagctactcaggagaattgc t chr9:139660877-139660977 + 65 1.67e-10 ccttggtcta gtggtgacgccagcgtctgggaagacacct gttgcc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCDWCTBRGRAGRCTSMS MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:46936528-46936628 1.1e-18 12_[+3]_58 chr7:105622411-105622511 2.4e-16 16_[+3]_54 chr9:129317458-129317558 3.2e-15 34_[+3]_36 chr14:100736952-10073705 1.6e-14 15_[+3]_55 chr1:7939283-7939383 4.1e-13 27_[+3]_43 chr16:23342451-23342551 1.6e-12 18_[-3]_52 chr16:66791928-66792028 2.3e-12 63_[+3]_7 chr1:94316268-94316368 3.2e-12 22_[-3]_48 chr2:95858630-95858730 7.8e-12 66_[+3]_4 chr9:130943731-130943831 7.8e-12 48_[+3]_22 chr9:140515347-140515447 2.2e-11 66_[+3]_4 chr18:29320101-29320201 3.2e-11 69_[+3]_1 chr9:139660877-139660977 1.7e-10 64_[+3]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCDWCTBRGRAGRCTSMS MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTGTAATCCCAGCDWCTBRGRAGRCTSMS width=30 seqs=13 chr17:46936528-46936628 ( 13) CCTGTAATCCCAGCTACTTGGGAGGCTGAG 1 chr7:105622411-105622511 ( 17) CCTGTAGTCCCAGCTACTCAGGAGGCTGAG 1 chr9:129317458-129317558 ( 35) CCTGTAATCCCAGCTACTCAGTAGGCTGAG 1 chr14:100736952-10073705 ( 16) CCTGTAGTCCCAACTACTCGGGAGGCTGAG 1 chr1:7939283-7939383 ( 28) CCTGTAATCCCAGTACTTTAGGAGGCTGAG 1 chr16:23342451-23342551 ( 19) CTTGTAATAGCAGCTATTTGGGAGGCTGAC 1 chr16:66791928-66792028 ( 64) CCTGAAATCCCAGCACTTTGGGAGGCCAAG 1 chr1:94316268-94316368 ( 23) GCGGTAACACCAGCGTCTCGGAAGACGCCC 1 chr2:95858630-95858730 ( 67) GCGGTGACGCCAGCGTCTGGGAAGACGCCC 1 chr9:130943731-130943831 ( 49) GCGGTGACGCCAGCGTCTGGGAAGACGCCC 1 chr9:140515347-140515447 ( 67) CCTGTAATCCTAGCAGTTTAGGAAGCCGAG 1 chr18:29320101-29320201 ( 70) CCTGAAGTCCCAGCTACTCAGGAGAATTGC 1 chr9:139660877-139660977 ( 65) GTGGTGACGCCAGCGTCTGGGAAGACACCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCDWCTBRGRAGRCTSMS MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 41322 bayes= 12.1644 E= 1.3e-035 -1035 158 41 -1035 -1035 187 -1035 -80 -1035 -1035 41 137 -1035 -1035 211 -1035 -80 -1035 -1035 166 152 -1035 -1 -1035 152 -1035 -1 -1035 -1035 41 -1035 137 -80 141 -1 -1035 -1035 199 -159 -1035 -1035 199 -1035 -180 190 -1035 -1035 -1035 -180 -1035 199 -1035 -1035 199 -1035 -180 -22 -1035 41 78 78 -59 -159 20 -1035 158 -1035 20 -1035 -1035 -1035 190 -1035 73 -1 52 52 -1035 141 -1035 -1035 -1035 211 -1035 20 -1035 141 -180 190 -1035 -1035 -1035 -180 -1035 199 -1035 52 -1035 141 -1035 -180 199 -1035 -1035 -180 -59 -1 101 -180 41 121 -180 120 41 -159 -1035 -1035 73 121 -180 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCDWCTBRGRAGRCTSMS MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 13 E= 1.3e-035 0.000000 0.692308 0.307692 0.000000 0.000000 0.846154 0.000000 0.153846 0.000000 0.000000 0.307692 0.692308 0.000000 0.000000 1.000000 0.000000 0.153846 0.000000 0.000000 0.846154 0.769231 0.000000 0.230769 0.000000 0.769231 0.000000 0.230769 0.000000 0.000000 0.307692 0.000000 0.692308 0.153846 0.615385 0.230769 0.000000 0.000000 0.923077 0.076923 0.000000 0.000000 0.923077 0.000000 0.076923 1.000000 0.000000 0.000000 0.000000 0.076923 0.000000 0.923077 0.000000 0.000000 0.923077 0.000000 0.076923 0.230769 0.000000 0.307692 0.461538 0.461538 0.153846 0.076923 0.307692 0.000000 0.692308 0.000000 0.307692 0.000000 0.000000 0.000000 1.000000 0.000000 0.384615 0.230769 0.384615 0.384615 0.000000 0.615385 0.000000 0.000000 0.000000 1.000000 0.000000 0.307692 0.000000 0.615385 0.076923 1.000000 0.000000 0.000000 0.000000 0.076923 0.000000 0.923077 0.000000 0.384615 0.000000 0.615385 0.000000 0.076923 0.923077 0.000000 0.000000 0.076923 0.153846 0.230769 0.538462 0.076923 0.307692 0.538462 0.076923 0.615385 0.307692 0.076923 0.000000 0.000000 0.384615 0.538462 0.076923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCDWCTBRGRAGRCTSMS MEME-3 regular expression -------------------------------------------------------------------------------- [CG]C[TG]GT[AG][AG][TC][CG]CCAGC[TGA][AT][CT]T[CTG][GA]G[GA]AG[GA]C[TG][GC][AC][GC] -------------------------------------------------------------------------------- Time 858.35 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:145774168-145774268 7.31e-02 100 chr4:41218607-41218707 3.47e-02 100 chr9:130699519-130699619 4.06e-01 100 chrX:119609129-119609229 2.44e-04 67_[-2(5.97e-07)]_3 chr20:38674455-38674555 3.39e-01 100 chr2:179261373-179261473 3.71e-01 100 chr12:128174704-12817480 2.08e-01 100 chr15:99124388-99124488 2.69e-03 29_[+2(4.15e-07)]_41 chr1:157989320-157989420 2.94e-01 100 chr19:17320118-17320218 8.72e-02 100 chr9:104220281-104220381 4.33e-02 2_[+2(2.21e-05)]_68 chr11:64868160-64868260 5.01e-03 61_[-2(3.86e-06)]_9 chr19:58257864-58257964 6.25e-01 100 chr18:68265582-68265682 2.83e-01 100 chr2:163747669-163747769 6.14e-01 100 chr2:32778683-32778783 5.68e-01 100 chr2:232260119-232260219 8.28e-04 73_[+1(2.42e-07)]_6 chr12:110011159-11001125 1.59e-01 100 chr9:124148667-124148767 5.36e-01 100 chr5:72430960-72431060 5.55e-01 100 chr3:131469128-131469228 3.45e-01 100 chr16:24266782-24266882 4.20e-02 32_[+1(5.26e-05)]_47 chr11:71524362-71524462 3.15e-01 100 chr2:177314626-177314726 3.65e-02 60_[-1(5.26e-05)]_19 chr10:115712909-11571300 1.93e-01 100 chr16:66791928-66792028 4.61e-12 14_[-2(1.50e-06)]_19_[+3(2.30e-12)]_\ 7 chr17:48228696-48228796 5.42e-02 100 chr10:117469488-11746958 6.97e-01 100 chr12:53220993-53221093 5.12e-01 100 chr17:47448240-47448340 3.90e-02 70_[+1(1.04e-05)]_9 chr12:118228014-11822811 3.10e-01 100 chr7:30785632-30785732 2.39e-03 17_[+2(2.83e-05)]_18_[+1(8.61e-05)]_\ 14 chr2:219737105-219737205 6.23e-04 61_[+1(1.77e-07)]_18 chr22:33232049-33232149 5.76e-04 52_[+2(5.69e-08)]_18 chr17:36021684-36021784 1.90e-02 17_[+2(5.21e-06)]_53 chr5:137514262-137514362 9.62e-01 100 chr19:47213825-47213925 2.29e-02 18_[-1(2.28e-05)]_35_[-1(1.46e-05)]_\ 5 chr3:149052124-149052224 6.47e-01 100 chr11:96159239-96159339 5.23e-02 35_[+2(1.72e-05)]_35 chr2:182294969-182295069 9.08e-01 100 chr14:36295109-36295209 2.93e-01 100 chrX:53356422-53356522 3.13e-01 100 chr3:159278019-159278119 9.37e-01 100 chr9:12699586-12699686 2.16e-03 65_[+2(4.51e-05)]_5 chr4:83975679-83975779 1.74e-01 100 chr11:119928743-11992884 1.16e-01 100 chr3:49893792-49893892 7.51e-03 74_[+1(2.07e-06)]_5 chr5:114014502-114014602 3.80e-01 100 chr6:32407379-32407479 2.50e-01 100 chr10:73104041-73104141 2.39e-01 100 chr11:133006290-13300639 2.40e-01 100 chr9:135682222-135682322 6.89e-01 100 chr11:132120829-13212092 9.26e-01 100 chr6:144605148-144605248 7.91e-01 100 chr9:139660877-139660977 9.79e-07 64_[+3(1.67e-10)]_6 chr12:98812313-98812413 1.14e-04 74_[+1(1.21e-06)]_5 chr19:1357735-1357835 2.92e-03 37_[-2(7.56e-07)]_33 chr3:14692838-14692938 6.86e-01 100 chr2:167241218-167241318 3.60e-02 54_[-1(3.88e-05)]_25 chr6:136064569-136064669 9.85e-02 100 chr6:32145702-32145802 4.10e-01 100 chr12:4635983-4636083 1.35e-01 100 chr17:67542775-67542875 5.73e-01 100 chr9:19012846-19012946 4.71e-01 100 chr13:44468611-44468711 1.99e-02 5_[+2(3.86e-06)]_4_[+2(5.21e-06)]_\ 31 chr16:71671248-71671348 4.34e-01 100 chr4:37884271-37884371 1.20e-01 100 chr22:20193687-20193787 7.21e-04 1_[+1(9.22e-08)]_78 chr15:51069111-51069211 2.27e-01 100 chr7:143260158-143260258 1.89e-02 1_[+2(1.57e-05)]_69 chr17:45973031-45973131 9.68e-01 100 chr14:105330324-10533042 1.11e-03 60_[-1(5.14e-07)]_19 chr15:59983240-59983340 6.85e-01 100 chr4:8359550-8359650 6.47e-01 100 chr8:128413346-128413446 4.79e-01 100 chr7:2671095-2671195 5.31e-03 27_[+1(1.83e-05)]_52 chr6:30806111-30806211 2.77e-02 62_[+1(9.24e-06)]_17 chr1:205345095-205345195 5.19e-02 16_[-1(9.47e-05)]_63 chr8:23820548-23820648 2.82e-03 75_[-1(5.14e-07)]_4 chr20:11566177-11566277 3.66e-01 100 chr5:1668034-1668134 1.39e-02 35_[+1(8.22e-06)]_44 chr3:147334836-147334936 7.77e-01 100 chr7:14755677-14755777 1.22e-02 58_[-2(2.84e-06)]_12 chr1:149763979-149764079 1.29e-02 12_[-1(6.47e-06)]_67 chr15:87084820-87084920 4.50e-02 17_[+3(9.04e-05)]_53 chr3:15292265-15292365 6.37e-01 100 chr22:30234248-30234348 5.41e-03 43_[-1(1.59e-06)]_36 chr9:118914151-118914251 2.75e-02 62_[-2(7.64e-06)]_8 chr6:13328184-13328284 1.55e-04 [+1(3.49e-05)]_51_[-1(2.69e-06)]_7 chr18:29320101-29320201 4.28e-17 17_[-2(1.36e-12)]_22_[+3(3.15e-11)]_\ 1 chr17:41656040-41656140 1.34e-02 46_[-1(6.47e-06)]_33 chr10:126432462-12643256 5.60e-03 11_[-1(3.48e-06)]_9_[+1(1.46e-05)]_\ 13_[-1(1.17e-05)]_4 chr3:42543824-42543924 3.95e-04 14_[-1(3.95e-06)]_3_[-1(5.55e-08)]_\ 41 chr16:89237680-89237780 1.63e-05 2_[-1(1.08e-09)]_49_[-1(1.59e-06)]_\ 7 chr11:67572782-67572882 1.30e-04 9_[+1(2.54e-05)]_[+1(5.73e-06)]_16_\ [+1(2.82e-07)]_12 chr6:41338207-41338307 7.94e-01 100 chr20:45497044-45497144 2.48e-03 21_[-2(8.05e-05)]_16_[+2(2.84e-06)]_\ 3 chr5:169611740-169611840 1.14e-01 100 chr6:56579129-56579229 1.13e-01 100 chr22:38054254-38054354 2.24e-01 100 chr19:10530677-10530777 8.68e-03 49_[+1(1.17e-05)]_30 chr2:31393896-31393996 4.79e-01 100 chr9:119420472-119420572 2.49e-01 100 chr11:119231623-11923172 4.79e-01 100 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chr12:112524934-11252503 2.21e-01 100 chr8:80590034-80590134 9.30e-01 100 chr6:152059908-152060008 9.82e-01 100 chr7:73038804-73038904 4.49e-02 68_[-1(7.09e-05)]_11 chr5:111501933-111502033 1.24e-01 100 chr6:15622974-15623074 2.66e-04 19_[-2(2.02e-08)]_51 chr11:131547641-13154774 8.11e-01 100 chr1:161707229-161707329 6.88e-02 100 chr20:46277710-46277810 9.21e-02 100 chr17:32741228-32741328 3.83e-01 100 chr15:76116140-76116240 2.42e-01 100 chr11:71445460-71445560 4.30e-01 100 chr4:102976733-102976833 1.35e-01 100 chr11:78125284-78125384 8.17e-01 100 chr11:75054477-75054577 5.74e-02 100 chr1:159147012-159147112 2.51e-01 100 chr22:17697718-17697818 8.68e-01 100 chr13:99518695-99518795 3.27e-02 70_[-2(2.03e-05)] chr18:44786484-44786584 1.69e-03 38_[+1(1.82e-06)]_41 chr16:30621512-30621612 1.77e-01 100 chr5:44432130-44432230 1.52e-03 63_[-2(3.24e-07)]_7 chrX:15317626-15317726 6.71e-02 100 chr14:34580861-34580961 5.77e-01 100 chr10:112615238-11261533 4.04e-01 100 chr2:85464734-85464834 1.84e-03 46_[+1(3.95e-06)]_33 chr2:11076460-11076560 4.47e-02 100 chr9:130889995-130890095 2.60e-02 66_[-1(1.17e-05)]_13 chr1:53651033-53651133 2.04e-05 25_[-2(6.95e-06)]_14_[+2(1.16e-09)]_\ 1 chr17:47492155-47492255 6.43e-02 34_[+1(2.28e-05)]_45 chr2:121467001-121467101 5.72e-01 100 chr13:96188718-96188818 1.15e-01 100 chr12:125218839-12521893 2.42e-03 19_[-1(1.31e-05)]_60 chr4:158138512-158138612 2.72e-02 2_[+2(2.03e-05)]_68 chr22:25024875-25024975 1.38e-01 100 chr6:27618323-27618423 2.29e-03 56_[+2(2.84e-06)]_14 chr6:4008655-4008755 1.44e-01 54_[-2(8.05e-05)]_16 chr3:125647528-125647628 3.63e-01 100 chr2:85640636-85640736 1.43e-02 39_[-1(2.28e-05)]_40 chr1:6579940-6580040 1.23e-02 7_[-3(4.91e-05)]_63 chr9:124016461-124016561 1.09e-04 69_[-1(1.83e-05)]_10 chr16:1156819-1156919 1.10e-02 9_[+1(6.47e-06)]_70 chr9:130943731-130943831 1.01e-08 48_[+3(7.78e-12)]_22 chr2:196537072-196537172 3.35e-01 100 chr9:20423054-20423154 3.76e-01 100 chr1:38412606-38412706 4.27e-01 100 chr3:136024509-136024609 6.99e-01 100 chr1:110198979-110199079 4.76e-04 14_[+1(9.22e-08)]_3_[+1(5.26e-05)]_\ 41 chr5:149493864-149493964 7.58e-02 11_[+1(6.43e-05)]_68 chr5:101871835-101871935 1.78e-02 55_[-2(3.49e-06)]_15 chr1:243654586-243654686 3.51e-03 1_[-2(2.61e-05)]_69 chr10:102802187-10280228 1.49e-01 71_[-1(5.82e-05)]_8 chr22:37882375-37882475 5.94e-02 38_[-1(7.09e-05)]_41 chr5:90540340-90540440 4.40e-03 51_[-2(1.34e-06)]_19 chr7:52221967-52222067 6.31e-01 100 chr4:323907-324007 9.36e-07 1_[-2(3.59e-05)]_7_[+2(1.64e-10)]_\ 32 chr8:97246198-97246298 5.22e-01 100 chr15:79093192-79093292 1.88e-02 22_[-1(1.31e-05)]_57 chr17:46371344-46371444 1.96e-01 100 chr19:48706931-48707031 2.30e-03 27_[+1(1.05e-06)]_52 chr19:41120501-41120601 5.64e-01 100 chr16:68482359-68482459 2.20e-01 100 chr14:31031290-31031390 6.02e-02 23_[-2(5.24e-05)]_47 chr13:37021384-37021484 9.99e-01 100 chr11:49250489-49250589 5.96e-03 54_[+2(9.53e-07)]_16 chr1:35317709-35317809 5.09e-01 100 chr1:17081858-17081958 7.52e-01 100 chr4:186049448-186049548 5.15e-02 [+1(3.49e-05)]_79 chr21:45899532-45899632 2.21e-01 100 chr15:79019062-79019162 4.84e-03 60_[-1(4.48e-06)]_19 chr11:128654155-12865425 8.45e-01 100 chr5:145235468-145235568 1.34e-01 45_[-1(5.26e-05)]_34 chr3:157069730-157069830 1.49e-01 100 chr1:28573635-28573735 4.21e-02 69_[-1(1.04e-05)]_10 chr19:40909350-40909450 7.01e-03 56_[-1(2.36e-06)]_23 chr18:47882267-47882367 4.69e-02 100 chr6:116937276-116937376 2.63e-01 100 chr11:14435907-14436007 4.01e-01 100 chr20:43226738-43226838 2.10e-01 100 chr18:21596065-21596165 1.55e-01 100 chr1:202348712-202348812 2.20e-01 100 chrX:101013449-101013549 2.05e-02 66_[+2(4.27e-06)]_4 chr15:75591252-75591352 1.31e-01 100 chr12:56984691-56984791 3.38e-02 22_[+1(9.24e-06)]_57 chr1:22738792-22738892 4.73e-01 100 chr2:66503190-66503290 9.57e-01 100 chr17:46936528-46936628 1.17e-15 12_[+3(1.12e-18)]_22_[+1(5.26e-05)]_\ 15 chr20:50003535-50003635 2.08e-01 100 chr10:116930999-11693109 1.65e-02 2_[+2(3.49e-06)]_68 chr11:81280929-81281029 2.85e-01 100 chr2:85474348-85474448 2.60e-01 100 chr17:6346784-6346884 3.20e-01 100 chr10:63554999-63555099 1.48e-01 100 chr13:91730153-91730253 6.63e-03 36_[-2(2.30e-06)]_34 chr6:30483751-30483851 4.58e-03 6_[+1(1.17e-05)]_73 chr17:49934394-49934494 4.75e-01 100 chr3:103159365-103159465 8.70e-01 100 chr2:208637151-208637251 2.45e-01 100 chr5:60763496-60763596 1.46e-02 37_[+2(2.56e-06)]_33 chr5:115174700-115174800 6.73e-01 100 chr5:131831876-131831976 2.60e-01 100 chr5:149821153-149821253 5.81e-01 100 chr11:118663368-11866346 2.01e-02 4_[-1(7.29e-06)]_75 chr1:162760073-162760173 1.39e-01 42_[-1(8.61e-05)]_37 chr15:74611930-74612030 7.66e-03 42_[-1(1.17e-05)]_37 chr18:5885314-5885414 7.99e-02 100 chr11:67120586-67120686 1.32e-02 21_[+1(3.48e-06)]_24_[+1(6.47e-06)]_\ 13 chr21:44859205-44859305 8.98e-01 100 chr17:74349868-74349968 6.41e-03 6_[+3(1.27e-05)]_64 chr17:32008297-32008397 4.97e-01 100 chr5:72783605-72783705 1.84e-01 100 chr4:174302750-174302850 4.87e-01 100 chrX:18228618-18228718 4.19e-01 100 chr3:196244744-196244844 5.60e-01 100 chr13:73849343-73849443 7.44e-02 100 chr9:110101613-110101713 1.16e-06 70_[+2(7.00e-11)] chr13:60953852-60953952 8.47e-01 100 chr11:74853831-74853931 1.06e-02 12_[-1(8.61e-05)]_67 chr11:119341733-11934183 4.41e-02 77_[-1(3.49e-05)]_2 chr16:86108010-86108110 9.71e-03 72_[+1(1.82e-06)]_7 chr9:140515347-140515447 2.78e-08 66_[+3(2.21e-11)]_4 chr1:207158495-207158595 1.25e-01 29_[-3(9.77e-05)]_41 chr9:88401148-88401248 1.62e-02 7_[+2(1.01e-05)]_63 chr3:62231362-62231462 7.45e-01 100 chr15:78799458-78799558 3.07e-01 100 chr7:22989588-22989688 4.55e-01 100 chr11:89350128-89350228 1.09e-02 70_[+2(4.72e-06)] chr19:46807176-46807276 4.52e-03 14_[-1(4.30e-05)]_12_[-1(1.17e-05)]_\ 32 chr8:102594515-102594615 4.52e-01 100 chr11:21289599-21289699 1.73e-01 100 chr18:68599020-68599120 2.55e-01 100 chr14:38875005-38875105 4.74e-02 44_[+1(4.30e-05)]_35 chr17:66053455-66053555 3.34e-01 100 chr11:71503470-71503570 4.32e-01 100 chr1:32028253-32028353 7.37e-01 100 chr19:51611117-51611217 4.17e-01 100 chr7:149111831-149111931 2.64e-02 33_[+3(1.39e-05)]_37 chr16:10837828-10837928 3.07e-02 2_[+1(5.26e-05)]_47_[+1(1.46e-05)]_\ 9 chr12:56139205-56139305 3.07e-02 9_[-1(3.88e-05)]_70 chr2:95743854-95743954 5.19e-01 100 chr15:40999708-40999808 1.24e-03 1_[+2(2.52e-07)]_69 chr6:49420705-49420805 1.69e-03 23_[-2(3.67e-07)]_47 chr1:6208587-6208687 9.31e-02 3_[+1(4.30e-05)]_76 chr4:127144451-127144551 3.50e-02 39_[+2(8.39e-06)]_31 chr10:31642561-31642661 7.35e-01 100 chr19:2456962-2457062 7.88e-02 67_[+1(8.61e-05)]_12 chr14:55118868-55118968 5.18e-01 100 chr2:47629402-47629502 6.08e-02 100 chr17:48637164-48637264 3.39e-02 52_[-1(1.83e-05)]_27 chr12:61078540-61078640 2.99e-01 100 chr19:42746712-42746812 9.22e-02 15_[-1(5.26e-05)]_64 chr5:141705591-141705691 7.78e-01 100 chr6:32838916-32839016 1.00e-03 54_[+2(5.74e-06)]_16 chr1:159391263-159391363 1.33e-03 17_[+1(9.15e-07)]_62 chr12:58231524-58231624 3.46e-01 100 chr2:71333461-71333561 1.12e-02 72_[-1(2.04e-05)]_7 chr20:36981463-36981563 2.77e-08 26_[+2(5.19e-12)]_44 chr2:211113186-211113286 1.48e-02 49_[-2(8.39e-06)]_21 chr7:12536276-12536376 3.06e-01 100 chr12:48206339-48206439 2.31e-02 100 chr18:12862240-12862340 9.06e-01 100 chr10:103985677-10398577 7.85e-02 21_[+1(3.49e-05)]_16_[+1(4.30e-05)]_\ 21 chr11:61559191-61559291 2.29e-02 4_[-1(1.64e-05)]_44_[-1(1.04e-05)]_\ 10 chr11:71459770-71459870 2.39e-02 9_[+2(3.31e-05)]_61 chr4:73752016-73752116 5.44e-01 100 chr2:111891186-111891286 1.91e-01 100 chr20:43150573-43150673 2.27e-01 100 chr5:150138060-150138160 4.57e-04 14_[-1(1.50e-07)]_65 chr8:89033166-89033266 1.69e-01 100 chr2:95858630-95858730 1.73e-08 66_[+3(7.78e-12)]_4 chr18:24062501-24062601 8.45e-01 100 chr12:4313055-4313155 6.09e-01 100 chr10:119105991-11910609 2.01e-01 100 chr20:34042430-34042530 6.87e-03 77_[-1(2.28e-05)]_2 chr5:148941239-148941339 1.45e-01 100 chr1:157131696-157131796 8.92e-02 5_[-2(3.31e-05)]_65 chr18:29324459-29324559 9.81e-01 100 chr4:333221-333321 6.73e-01 100 chr19:42772789-42772889 9.42e-01 100 chr19:53072925-53073025 2.15e-01 100 chr11:6406243-6406343 8.20e-01 100 chr21:37500182-37500282 8.51e-01 100 chr19:46498124-46498224 1.84e-01 100 chr1:152458914-152459014 2.17e-01 100 chr16:68396642-68396742 9.34e-01 100 chr11:69453679-69453779 7.99e-02 72_[+1(5.26e-05)]_7 chr2:70872719-70872819 7.80e-01 100 chr2:10522146-10522246 5.38e-01 100 chr11:67348823-67348923 9.24e-02 100 chr16:46892043-46892143 7.94e-01 100 chr1:117602470-117602570 4.72e-01 100 chr5:126872226-126872326 3.75e-02 70_[-2(1.10e-05)] chr1:7939283-7939383 2.16e-09 27_[+3(4.06e-13)]_43 chr3:79816267-79816367 9.44e-01 100 chr19:51142437-51142537 4.24e-02 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: indra.stanford.edu ********************************************************************************