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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| 1_run_filter.py | 2026-01-13 02:13 | 16K | |
| 2_run_finemo.py | 2026-01-13 02:13 | 22K | |
| 3_run_kmeans.py | 2026-01-13 02:13 | 9.6K | |
| 4_run_cluster.py | 2026-01-26 23:43 | 54K | |
| 5_run_profiles.py | 2026-01-13 02:13 | 44K | |
| CLUSTERED_TSV_OUTLINE.md | 2026-01-26 23:43 | 9.8K | |
| EDA_README.md | 2026-01-26 23:43 | 4.6K | |
| OBJECTIVE.md | 2026-01-13 04:30 | 1.1K | |
| Snakefile | 2026-01-12 19:22 | 16K | |
| Snakefile.original | 2026-01-12 19:08 | 279K | |
| __pycache__/ | 2026-01-13 02:06 | - | |
| annotations/ | 2025-12-07 09:19 | - | |
| auto_complete_workflow.sh | 2025-12-07 09:19 | 3.2K | |
| autonomous_completion.sh | 2025-12-07 09:19 | 4.1K | |
| config.sh | 2026-01-26 23:43 | 966 | |
| count_motifs_h5.py | 2026-01-26 23:43 | 3.2K | |
| create_heatmap_tsv.py | 2025-12-07 09:19 | 2.3K | |
| create_symlinks.sh | 2025-12-07 09:19 | 733 | |
| data/ | 2026-01-13 02:06 | - | |
| eda_chrombpnet_variants.py | 2026-01-26 23:43 | 26K | |
| eda_output/ | 2026-01-13 05:22 | - | |
| generate_variant_summary_html.py | 2025-12-10 03:37 | 18K | |
| hdma_motif_mapping.tsv | 2026-01-13 02:43 | 36K | |
| logs/ | 2025-12-16 02:21 | - | |
| model_datasets_config.py | 2026-01-26 23:43 | 6.6K | |
| monitor_pipeline.sh | 2025-12-07 09:19 | 1.3K | |
| monitor_progress.sh | 2025-12-07 09:19 | 1.7K | |
| monitor_snakemake.sh | 2025-12-07 09:19 | 1.1K | |
| old_4_run_cluster.py | 2026-01-13 02:45 | 22K | |
| plots_for_variants.done | 2025-12-09 05:30 | 0 | |
| refs/ | 2025-12-12 23:03 | - | |
| run_eda.sh | 2026-01-26 23:43 | 2.3K | |
| scrape_hdma_motifs.py | 2026-01-26 23:43 | 17K | |
| splits/ | 2026-01-13 00:42 | - | |
| test_hdma_motifs.tsv | 2026-01-13 01:57 | 485K | |
| update_snakefile_restructure.py | 2025-12-07 09:19 | 10K | |
| varbook_gen/ | 2026-01-12 22:19 | - | |
| variant_report.html | 2025-12-07 09:19 | 4.6M | |