2021-09-20 19:39:05,182:eu_debug: submission=False: In non-submission mode. 2021-09-20 19:39:05,585:eu_debug: submission=True: In submission mode. 2021-09-20 19:39:06,185:eu_debug: IN post(). 2021-09-20 19:39:06,185:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference To DCC with URL https://www.encodeproject.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ], "award": "/awards/UM1HG009436/", "examined_loci": [ "/gene/2623", "/gene/4602", "/gene/23613" ], "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2021-09-20 19:39:06,344:eu_debug: Success. 2021-09-20 19:39:12,297:eu_debug: submission=False: In non-submission mode. 2021-09-20 19:39:12,630:eu_debug: submission=True: In submission mode. 2021-09-20 19:39:13,227:eu_debug: IN post(). 2021-09-20 19:39:13,236:eu_debug: <<<<<< POST file record will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference.File To DCC with URL https://www.encodeproject.org/file and this payload: { "aliases": [ "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference.File" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference", "file_format": "csv", "file_size": 3473891, "lab": "/labs/will-greenleaf/", "md5sum": "22eb43a1353859e6a78dd7b4bfd814fe", "output_type": "elements reference", "submitted_file_name": "hg38_processed_3gene_library_reference.csv" } 2021-09-20 19:39:13,706:eu_debug: Success. 2021-09-20 19:39:13,706:eu_debug: IN upload_file() 2021-09-20 19:39:13,706:eu_debug: Attempting to generate new file upload credentials 2021-09-20 19:39:14,139:eu_debug: Success: upload credentials for 'ENCFF964OOO' regenerated. 2021-09-20 19:39:14,140:eu_debug: >>>>>>GET ENCFF964OOO From DCC with URL https://www.encodeproject.org/ENCFF964OOO/?format=json&datastore=database 2021-09-20 19:39:14,353:eu_debug: Running command 'aws s3 cp hg38_processed_3gene_library_reference.csv s3://encode-files/2021/09/21/dc988ce2-a199-4584-8c94-72e3c226010e/ENCFF964OOO.csv'. 2021-09-20 19:39:15,509:eu_debug: AWS upload successful. 2021-09-20 19:39:21,833:eu_debug: submission=False: In non-submission mode. 2021-09-20 19:39:22,202:eu_debug: submission=True: In submission mode. 2021-09-20 19:39:22,849:eu_debug: IN patch() 2021-09-20 19:39:22,849:eu_debug: >>>>>>GET will-greenleaf:CRISPR_GATA1_tiling.CRISPRi_T7 From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRi_T7/?format=json&datastore=database&frame=edit 2021-09-20 19:39:22,975:eu_debug: <<<<<< PATCHING will-greenleaf:CRISPR_GATA1_tiling.CRISPRi_T7 To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRi_T7 and this payload: { "elements_references": [ "ENCSR806BKK", "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ] } 2021-09-20 19:39:23,382:eu_debug: Success. 2021-09-20 19:39:23,383:eu_debug: IN patch() 2021-09-20 19:39:23,383:eu_debug: >>>>>>GET will-greenleaf:CRISPR_GATA1_tiling.CRISPRi_T21 From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRi_T21/?format=json&datastore=database&frame=edit 2021-09-20 19:39:23,504:eu_debug: <<<<<< PATCHING will-greenleaf:CRISPR_GATA1_tiling.CRISPRi_T21 To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRi_T21 and this payload: { "elements_references": [ "ENCSR806BKK", "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ] } 2021-09-20 19:39:23,895:eu_debug: Success. 2021-09-20 19:39:23,896:eu_debug: IN patch() 2021-09-20 19:39:23,896:eu_debug: >>>>>>GET will-greenleaf:CRISPR_GATA1_tiling.CRISPRk_T7 From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRk_T7/?format=json&datastore=database&frame=edit 2021-09-20 19:39:24,019:eu_debug: <<<<<< PATCHING will-greenleaf:CRISPR_GATA1_tiling.CRISPRk_T7 To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRk_T7 and this payload: { "elements_references": [ "ENCSR806BKK", "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ] } 2021-09-20 19:39:24,716:eu_debug: Success. 2021-09-20 19:39:24,717:eu_debug: IN patch() 2021-09-20 19:39:24,717:eu_debug: >>>>>>GET will-greenleaf:CRISPR_GATA1_tiling.CRISPRk_T21 From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRk_T21/?format=json&datastore=database&frame=edit 2021-09-20 19:39:24,840:eu_debug: <<<<<< PATCHING will-greenleaf:CRISPR_GATA1_tiling.CRISPRk_T21 To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRk_T21 and this payload: { "elements_references": [ "ENCSR806BKK", "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ] } 2021-09-20 19:39:25,232:eu_debug: Success. 2021-09-20 19:39:25,233:eu_debug: IN patch() 2021-09-20 19:39:25,233:eu_debug: >>>>>>GET will-greenleaf:CRISPR_GATA1_tiling.CRISPRa_T7 From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRa_T7/?format=json&datastore=database&frame=edit 2021-09-20 19:39:25,355:eu_debug: <<<<<< PATCHING will-greenleaf:CRISPR_GATA1_tiling.CRISPRa_T7 To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRa_T7 and this payload: { "elements_references": [ "ENCSR806BKK", "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ] } 2021-09-20 19:39:25,717:eu_debug: Success. 2021-09-20 19:39:25,718:eu_debug: IN patch() 2021-09-20 19:39:25,718:eu_debug: >>>>>>GET will-greenleaf:CRISPR_GATA1_tiling.CRISPRa_T21 From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRa_T21/?format=json&datastore=database&frame=edit 2021-09-20 19:39:25,839:eu_debug: <<<<<< PATCHING will-greenleaf:CRISPR_GATA1_tiling.CRISPRa_T21 To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRa_T21 and this payload: { "elements_references": [ "ENCSR806BKK", "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ] } 2021-09-20 19:39:26,556:eu_debug: Success. 2021-09-20 19:39:26,557:eu_debug: IN patch() 2021-09-20 19:39:26,557:eu_debug: >>>>>>GET will-greenleaf:CRISPR_GATA1_tiling.CRISPRd_T7 From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRd_T7/?format=json&datastore=database&frame=edit 2021-09-20 19:39:26,673:eu_debug: <<<<<< PATCHING will-greenleaf:CRISPR_GATA1_tiling.CRISPRd_T7 To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRd_T7 and this payload: { "elements_references": [ "ENCSR806BKK", "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ] } 2021-09-20 19:39:27,083:eu_debug: Success. 2021-09-20 19:39:27,084:eu_debug: IN patch() 2021-09-20 19:39:27,084:eu_debug: >>>>>>GET will-greenleaf:CRISPR_GATA1_tiling.CRISPRd_T21 From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRd_T21/?format=json&datastore=database&frame=edit 2021-09-20 19:39:27,204:eu_debug: <<<<<< PATCHING will-greenleaf:CRISPR_GATA1_tiling.CRISPRd_T21 To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPR_GATA1_tiling.CRISPRd_T21 and this payload: { "elements_references": [ "ENCSR806BKK", "will-greenleaf:K562_CRISPR_GATA1_MYB_ZMYND8_Growth.Reference" ] } 2021-09-20 19:39:27,574:eu_debug: Success.