2021-09-20 18:49:52,061:eu_debug:	submission=False: In non-submission mode.
2021-09-20 18:49:52,428:eu_debug:	submission=True: In submission mode.
2021-09-20 18:49:52,929:eu_debug:	
IN post().
2021-09-20 18:49:52,929:eu_debug:	<<<<<< POST biosample record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Biosample To DCC with URL https://www.encodeproject.org/biosample and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Biosample"
  ],
  "award": "/awards/UM1HG009436/",
  "biosample_ontology": "encode:K562",
  "donor": "ENCDO000AAD",
  "genetic_modifications": [
    "will-greenleaf:deletion"
  ],
  "lab": "/labs/will-greenleaf/",
  "organism": "/organisms/human/",
  "post_nucleic_acid_delivery_time": 6,
  "post_nucleic_acid_delivery_time_units": "day",
  "source": "/sources/michael-bassik/",
  "treatments": [
    "will-greenleaf:1ugml_puromycin"
  ]
}


2021-09-20 18:49:53,296:eu_debug:	Success.
2021-09-20 18:49:53,297:eu_debug:	
IN post().
2021-09-20 18:49:53,297:eu_debug:	<<<<<< POST biosample record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Biosample To DCC with URL https://www.encodeproject.org/biosample and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Biosample"
  ],
  "award": "/awards/UM1HG009436/",
  "biosample_ontology": "encode:K562",
  "donor": "ENCDO000AAD",
  "genetic_modifications": [
    "will-greenleaf:deletion"
  ],
  "lab": "/labs/will-greenleaf/",
  "organism": "/organisms/human/",
  "post_nucleic_acid_delivery_time": 6,
  "post_nucleic_acid_delivery_time_units": "day",
  "source": "/sources/michael-bassik/",
  "treatments": [
    "will-greenleaf:1ugml_puromycin"
  ]
}


2021-09-20 18:49:53,643:eu_debug:	Success.
2021-09-20 18:49:53,644:eu_debug:	
IN post().
2021-09-20 18:49:53,645:eu_debug:	<<<<<< POST biosample record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Biosample To DCC with URL https://www.encodeproject.org/biosample and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Biosample"
  ],
  "award": "/awards/UM1HG009436/",
  "biosample_ontology": "encode:K562",
  "donor": "ENCDO000AAD",
  "genetic_modifications": [
    "will-greenleaf:deletion"
  ],
  "lab": "/labs/will-greenleaf/",
  "organism": "/organisms/human/",
  "post_nucleic_acid_delivery_time": 20,
  "post_nucleic_acid_delivery_time_units": "day",
  "source": "/sources/michael-bassik/",
  "treatments": [
    "will-greenleaf:1ugml_puromycin"
  ]
}


2021-09-20 18:49:54,007:eu_debug:	Success.
2021-09-20 18:49:54,007:eu_debug:	
IN post().
2021-09-20 18:49:54,008:eu_debug:	<<<<<< POST biosample record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Biosample To DCC with URL https://www.encodeproject.org/biosample and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Biosample"
  ],
  "award": "/awards/UM1HG009436/",
  "biosample_ontology": "encode:K562",
  "donor": "ENCDO000AAD",
  "genetic_modifications": [
    "will-greenleaf:deletion"
  ],
  "lab": "/labs/will-greenleaf/",
  "organism": "/organisms/human/",
  "post_nucleic_acid_delivery_time": 20,
  "post_nucleic_acid_delivery_time_units": "day",
  "source": "/sources/michael-bassik/",
  "treatments": [
    "will-greenleaf:1ugml_puromycin"
  ]
}


2021-09-20 18:49:54,393:eu_debug:	Success.
2021-09-20 18:49:59,601:eu_debug:	submission=False: In non-submission mode.
2021-09-20 18:49:59,904:eu_debug:	submission=True: In submission mode.
2021-09-20 18:50:00,393:eu_debug:	
IN post().
2021-09-20 18:50:00,393:eu_debug:	<<<<<< POST library record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Library To DCC with URL https://www.encodeproject.org/library and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Library"
  ],
  "award": "/awards/UM1HG009436/",
  "biosample": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Biosample",
  "extraction_method": "QIAGEN DNeasy Blood & Tissue Kit",
  "lab": "/labs/will-greenleaf/",
  "nucleic_acid_term_name": "DNA"
}


2021-09-20 18:50:00,555:eu_debug:	Success.
2021-09-20 18:50:00,555:eu_debug:	
IN post().
2021-09-20 18:50:00,556:eu_debug:	<<<<<< POST library record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Library To DCC with URL https://www.encodeproject.org/library and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Library"
  ],
  "award": "/awards/UM1HG009436/",
  "biosample": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Biosample",
  "extraction_method": "QIAGEN DNeasy Blood & Tissue Kit",
  "lab": "/labs/will-greenleaf/",
  "nucleic_acid_term_name": "DNA"
}


2021-09-20 18:50:00,708:eu_debug:	Success.
2021-09-20 18:50:00,709:eu_debug:	
IN post().
2021-09-20 18:50:00,709:eu_debug:	<<<<<< POST library record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Library To DCC with URL https://www.encodeproject.org/library and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Library"
  ],
  "award": "/awards/UM1HG009436/",
  "biosample": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Biosample",
  "extraction_method": "QIAGEN DNeasy Blood & Tissue Kit",
  "lab": "/labs/will-greenleaf/",
  "nucleic_acid_term_name": "DNA"
}


2021-09-20 18:50:00,835:eu_debug:	Success.
2021-09-20 18:50:00,835:eu_debug:	
IN post().
2021-09-20 18:50:00,836:eu_debug:	<<<<<< POST library record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Library To DCC with URL https://www.encodeproject.org/library and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Library"
  ],
  "award": "/awards/UM1HG009436/",
  "biosample": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Biosample",
  "extraction_method": "QIAGEN DNeasy Blood & Tissue Kit",
  "lab": "/labs/will-greenleaf/",
  "nucleic_acid_term_name": "DNA"
}


2021-09-20 18:50:00,992:eu_debug:	Success.
2021-09-20 18:50:06,001:eu_debug:	submission=False: In non-submission mode.
2021-09-20 18:50:06,341:eu_debug:	submission=True: In submission mode.
2021-09-20 18:50:06,830:eu_debug:	
IN post().
2021-09-20 18:50:06,830:eu_debug:	<<<<<< POST library record will-greenleaf:K562_CTCF_FineMap_Plasmid.Library To DCC with URL https://www.encodeproject.org/library and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CTCF_FineMap_Plasmid.Library"
  ],
  "award": "/awards/UM1HG009436/",
  "lab": "/labs/will-greenleaf/",
  "nucleic_acid_term_name": "DNA"
}


2021-09-20 18:50:06,960:eu_debug:	Success.
2021-09-20 18:50:12,605:eu_debug:	submission=False: In non-submission mode.
2021-09-20 18:50:13,310:eu_debug:	submission=True: In submission mode.
2021-09-20 18:50:13,809:eu_debug:	
IN post().
2021-09-20 18:50:13,810:eu_debug:	<<<<<< POST reference record will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference To DCC with URL https://www.encodeproject.org/reference and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference"
  ],
  "award": "/awards/UM1HG009436/",
  "examined_loci": [
    "/genes/10664"
  ],
  "lab": "/labs/will-greenleaf/",
  "reference_type": "functional elements"
}


2021-09-20 18:50:13,941:eu_debug:	Success.
2021-09-20 18:50:18,799:eu_debug:	submission=False: In non-submission mode.
2021-09-20 18:50:19,120:eu_debug:	submission=True: In submission mode.
2021-09-20 18:50:19,604:eu_debug:	
IN post().
2021-09-20 18:50:19,605:eu_debug:	<<<<<< POST reference record will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference To DCC with URL https://www.encodeproject.org/reference and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference"
  ],
  "award": "/awards/UM1HG009436/",
  "examined_loci": [
    "/genes/10664"
  ],
  "lab": "/labs/will-greenleaf/",
  "reference_type": "functional elements"
}


2021-09-20 18:50:19,725:eu_debug:	{'@type': ['HTTPConflict', 'Error'], 'status': 'error', 'code': 409, 'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference')]"}
2021-09-20 18:50:19,725:eu_debug:	>>>>>>GET will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference From DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference/?format=json&datastore=database
2021-09-20 18:50:19,952:eu_debug:	Will not POST 'will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference' since it already exists with aliases '['will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference']'.
2021-09-20 18:50:31,869:eu_debug:	submission=False: In non-submission mode.
2021-09-20 18:50:32,188:eu_debug:	submission=True: In submission mode.
2021-09-20 18:50:32,678:eu_debug:	
IN post().
2021-09-20 18:50:32,688:eu_debug:	<<<<<< POST file record will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference.File To DCC with URL https://www.encodeproject.org/file and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference.File"
  ],
  "award": "/awards/UM1HG009436/",
  "dataset": "will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference",
  "file_format": "csv",
  "file_size": 4092578,
  "lab": "/labs/will-greenleaf/",
  "md5sum": "3644d0706837fdf1be2385d332aae2ba",
  "output_type": "elements reference",
  "submitted_file_name": "hg38_processed_finemapctcf_library_reference.csv"
}


2021-09-20 18:50:33,156:eu_debug:	Success.
2021-09-20 18:50:33,157:eu_debug:	
IN upload_file()

2021-09-20 18:50:33,157:eu_debug:	Attempting to generate new file upload credentials
2021-09-20 18:50:33,623:eu_debug:	Success: upload credentials for 'ENCFF537TDN' regenerated.
2021-09-20 18:50:33,623:eu_debug:	>>>>>>GET ENCFF537TDN From DCC with URL https://www.encodeproject.org/ENCFF537TDN/?format=json&datastore=database
2021-09-20 18:50:33,811:eu_debug:	Running command 'aws s3 cp hg38_processed_finemapctcf_library_reference.csv s3://encode-files/2021/09/21/f5a2fc18-e86d-473d-94fe-de11f20cf0e8/ENCFF537TDN.csv'.
2021-09-20 18:50:34,974:eu_debug:	AWS upload successful.
2021-09-20 18:54:05,711:eu_debug:	submission=False: In non-submission mode.
2021-09-20 18:54:06,035:eu_debug:	submission=True: In submission mode.
2021-09-20 18:54:06,525:eu_debug:	
IN post().
2021-09-20 18:54:06,525:eu_debug:	<<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CTCF_FineMap_Plasmid To DCC with URL https://www.encodeproject.org/functional_characterization_experiment and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CTCF_FineMap_Plasmid"
  ],
  "assay_term_name": "pooled clone sequencing",
  "award": "/awards/UM1HG009436/",
  "biosample_ontology": "/biosample-types/cloning_host_NTR_0000545/",
  "control_type": "control",
  "elements_references": [
    "will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference"
  ],
  "lab": "/labs/will-greenleaf/",
  "plasmids_library_type": "gRNA cloning"
}


2021-09-20 18:54:06,652:eu_debug:	Success.
2021-09-20 18:54:26,175:eu_debug:	submission=False: In non-submission mode.
2021-09-20 18:54:26,525:eu_debug:	submission=True: In submission mode.
2021-09-20 18:54:27,010:eu_debug:	
IN post().
2021-09-20 18:54:27,010:eu_debug:	<<<<<< POST replicate record will-greenleaf:CRISPR_CTCF_FineMap.Plasmid.SingleRep To DCC with URL https://www.encodeproject.org/replicate and this payload:

{
  "aliases": [
    "will-greenleaf:CRISPR_CTCF_FineMap.Plasmid.SingleRep"
  ],
  "biological_replicate_number": 1,
  "experiment": "will-greenleaf:K562_CTCF_FineMap_Plasmid",
  "library": "will-greenleaf:K562_CTCF_FineMap_Plasmid.Library",
  "technical_replicate_number": 1
}


2021-09-20 18:54:27,165:eu_debug:	Success.
2021-09-20 19:14:28,585:eu_debug:	submission=False: In non-submission mode.
2021-09-20 19:14:28,967:eu_debug:	submission=True: In submission mode.
2021-09-20 19:14:29,464:eu_debug:	
IN post().
2021-09-20 19:14:29,464:eu_debug:	<<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6 To DCC with URL https://www.encodeproject.org/functional_characterization_experiment and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6"
  ],
  "assay_term_name": "CRISPR screen",
  "award": "/awards/UM1HG009436/",
  "biosample_ontology": "encode:K562",
  "description": "Functional characterization series for Cas9/CRISPR fine-tiling proliferation screens at CTCF motifs around essential genes",
  "elements_cloning": "will-greenleaf:K562_CTCF_FineMap_Plasmid",
  "elements_references": [
    "will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference"
  ],
  "lab": "/labs/will-greenleaf/"
}


2021-09-20 19:14:29,625:eu_debug:	Success.
2021-09-20 19:14:29,626:eu_debug:	
IN post().
2021-09-20 19:14:29,627:eu_debug:	<<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20 To DCC with URL https://www.encodeproject.org/functional_characterization_experiment and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20"
  ],
  "assay_term_name": "CRISPR screen",
  "award": "/awards/UM1HG009436/",
  "biosample_ontology": "encode:K562",
  "description": "Functional characterization series for Cas9/CRISPR fine-tiling proliferation screens at CTCF motifs around essential genes",
  "elements_cloning": "will-greenleaf:K562_CTCF_FineMap_Plasmid",
  "elements_references": [
    "will-greenleaf:K562_CRISPR_CTCF_FineMap.Reference"
  ],
  "lab": "/labs/will-greenleaf/"
}


2021-09-20 19:14:29,764:eu_debug:	Success.
2021-09-20 19:14:38,150:eu_debug:	submission=False: In non-submission mode.
2021-09-20 19:14:38,475:eu_debug:	submission=True: In submission mode.
2021-09-20 19:14:38,971:eu_debug:	
IN post().
2021-09-20 19:14:38,972:eu_debug:	<<<<<< POST replicate record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Replicate To DCC with URL https://www.encodeproject.org/replicate and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Replicate"
  ],
  "biological_replicate_number": 1,
  "experiment": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6",
  "library": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Library",
  "technical_replicate_number": 1
}


2021-09-20 19:14:39,106:eu_debug:	Success.
2021-09-20 19:14:39,106:eu_debug:	
IN post().
2021-09-20 19:14:39,107:eu_debug:	<<<<<< POST replicate record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Replicate To DCC with URL https://www.encodeproject.org/replicate and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Replicate"
  ],
  "biological_replicate_number": 2,
  "experiment": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6",
  "library": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Library",
  "technical_replicate_number": 1
}


2021-09-20 19:14:39,226:eu_debug:	Success.
2021-09-20 19:14:39,227:eu_debug:	
IN post().
2021-09-20 19:14:39,227:eu_debug:	<<<<<< POST replicate record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Replicate To DCC with URL https://www.encodeproject.org/replicate and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Replicate"
  ],
  "biological_replicate_number": 1,
  "experiment": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20",
  "library": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Library",
  "technical_replicate_number": 1
}


2021-09-20 19:14:39,352:eu_debug:	Success.
2021-09-20 19:14:39,352:eu_debug:	
IN post().
2021-09-20 19:14:39,353:eu_debug:	<<<<<< POST replicate record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Replicate To DCC with URL https://www.encodeproject.org/replicate and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Replicate"
  ],
  "biological_replicate_number": 2,
  "experiment": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20",
  "library": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Library",
  "technical_replicate_number": 1
}


2021-09-20 19:14:39,504:eu_debug:	Success.
2021-09-20 19:14:58,474:eu_debug:	submission=False: In non-submission mode.
2021-09-20 19:14:58,796:eu_debug:	submission=True: In submission mode.
2021-09-20 19:14:59,296:eu_debug:	
IN post().
2021-09-20 19:14:59,296:eu_debug:	<<<<<< POST functional_characterization_experiment record N/A To DCC with URL https://www.encodeproject.org/functional_characterization_experiment and this payload:

{
  "record_id": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6",
  "replicates": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Replicate",
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Replicate"
  ]
}


2021-09-20 19:14:59,408:eu_debug:	Failed to POST N/A
2021-09-20 19:14:59,409:eu_debug:	<<<<<< DCC POST RESPONSE: 
2021-09-20 19:14:59,409:eu_debug:	{
  "@type": [
    "ValidationFailure",
    "Error"
  ],
  "code": 422,
  "description": "Failed validation",
  "errors": [
    {
      "description": "Additional properties are not allowed ('record_id' was unexpected)",
      "location": "body",
      "name": []
    },
    {
      "description": "'award' is a required property",
      "location": "body",
      "name": []
    },
    {
      "description": "'lab' is a required property",
      "location": "body",
      "name": []
    },
    {
      "description": "'assay_term_name' is a required property",
      "location": "body",
      "name": []
    },
    {
      "description": "'biosample_ontology' is a required property",
      "location": "body",
      "name": []
    }
  ],
  "status": "error",
  "title": "Unprocessable Entity"
}
2021-09-20 19:15:17,493:eu_debug:	submission=False: In non-submission mode.
2021-09-20 19:15:17,850:eu_debug:	submission=True: In submission mode.
2021-09-20 19:15:18,345:eu_debug:	
IN post().
2021-09-20 19:15:18,346:eu_debug:	<<<<<< POST functional_characterization_experiment record N/A To DCC with URL https://www.encodeproject.org/functional_characterization_experiment and this payload:

{
  "record_id": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6",
  "replicates": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Replicate",
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Replicate"
  ]
}


2021-09-20 19:15:18,455:eu_debug:	Failed to POST N/A
2021-09-20 19:15:18,455:eu_debug:	<<<<<< DCC POST RESPONSE: 
2021-09-20 19:15:18,455:eu_debug:	{
  "@type": [
    "ValidationFailure",
    "Error"
  ],
  "code": 422,
  "description": "Failed validation",
  "errors": [
    {
      "description": "Additional properties are not allowed ('record_id' was unexpected)",
      "location": "body",
      "name": []
    },
    {
      "description": "'award' is a required property",
      "location": "body",
      "name": []
    },
    {
      "description": "'lab' is a required property",
      "location": "body",
      "name": []
    },
    {
      "description": "'assay_term_name' is a required property",
      "location": "body",
      "name": []
    },
    {
      "description": "'biosample_ontology' is a required property",
      "location": "body",
      "name": []
    }
  ],
  "status": "error",
  "title": "Unprocessable Entity"
}
2021-09-20 19:15:31,075:eu_debug:	submission=False: In non-submission mode.
2021-09-20 19:15:31,395:eu_debug:	submission=True: In submission mode.
2021-09-20 19:15:32,089:eu_debug:	
IN patch()
2021-09-20 19:15:32,089:eu_debug:	>>>>>>GET will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6 From DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6/?format=json&datastore=database&frame=edit
2021-09-20 19:15:32,211:eu_debug:	<<<<<< PATCHING will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6 To DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6 and this payload:

{
  "replicates": [
    "6363eb38-1e05-451e-8cd8-9c86c16a3088",
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Replicate",
    "e849bf8a-c238-4345-89df-927d971aec98",
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Replicate"
  ]
}


2021-09-20 19:15:32,607:eu_debug:	Success.
2021-09-20 19:15:32,607:eu_debug:	
IN patch()
2021-09-20 19:15:32,608:eu_debug:	>>>>>>GET will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20 From DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20/?format=json&datastore=database&frame=edit
2021-09-20 19:15:32,728:eu_debug:	<<<<<< PATCHING will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20 To DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20 and this payload:

{
  "replicates": [
    "c8617513-e25f-42e4-aab0-d65430594d30",
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Replicate",
    "97a4b954-672d-4e3b-8d4b-1e562855fe4f",
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Replicate"
  ]
}


2021-09-20 19:15:33,112:eu_debug:	Success.
2021-09-20 19:15:39,015:eu_debug:	submission=False: In non-submission mode.
2021-09-20 19:15:39,322:eu_debug:	submission=True: In submission mode.
2021-09-20 19:15:39,810:eu_debug:	
IN post().
2021-09-20 19:15:39,825:eu_debug:	<<<<<< POST file record will-greenleaf:CRISPR_CTCF_FineMap.Plasmid.guide_quantifications To DCC with URL https://www.encodeproject.org/file and this payload:

{
  "aliases": [
    "will-greenleaf:CRISPR_CTCF_FineMap.Plasmid.guide_quantifications"
  ],
  "award": "/awards/UM1HG009436/",
  "dataset": "will-greenleaf:K562_CTCF_FineMap_Plasmid",
  "derived_from": [
    "will-greenleaf:K562_CTCF-FineMap_Plasmid_R1.fastq.gz"
  ],
  "file_format": "tsv",
  "file_size": 6213902,
  "lab": "/labs/will-greenleaf/",
  "md5sum": "ec6349e2fb33ec6d8bee19f39327fac5",
  "output_type": "guide quantifications",
  "submitted_file_name": "guide_quantification_CTCF_FineMap_Plasmid_counts.tsv"
}


2021-09-20 19:15:40,325:eu_debug:	Success.
2021-09-20 19:15:40,326:eu_debug:	
IN upload_file()

2021-09-20 19:15:40,326:eu_debug:	Attempting to generate new file upload credentials
2021-09-20 19:15:40,829:eu_debug:	Success: upload credentials for 'ENCFF794AIY' regenerated.
2021-09-20 19:15:40,830:eu_debug:	>>>>>>GET ENCFF794AIY From DCC with URL https://www.encodeproject.org/ENCFF794AIY/?format=json&datastore=database
2021-09-20 19:15:41,050:eu_debug:	Running command 'aws s3 cp guide_quantification_CTCF_FineMap_Plasmid_counts.tsv s3://encode-files/2021/09/21/0e8d4329-7347-4d43-82c3-d7fac418fcfc/ENCFF794AIY.tsv'.
2021-09-20 19:15:42,155:eu_debug:	AWS upload successful.
2021-09-20 19:15:42,156:eu_debug:	
IN post().
2021-09-20 19:15:42,178:eu_debug:	<<<<<< POST file record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Guide_quantifications To DCC with URL https://www.encodeproject.org/file and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R1.Guide_quantifications"
  ],
  "award": "/awards/UM1HG009436/",
  "dataset": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6",
  "derived_from": [
    "will-greenleaf:K562_CRISPRk_CTCF-FineMap_T6-R1_T1.fastq.gz"
  ],
  "file_format": "tsv",
  "file_size": 6211172,
  "lab": "/labs/will-greenleaf/",
  "md5sum": "0c01c9d28ab1662269592b962fbd5ce7",
  "output_type": "guide quantifications",
  "submitted_file_name": "guide_quantification_CTCF_FineMap_T6_BR1_counts.tsv"
}


2021-09-20 19:15:42,844:eu_debug:	Success.
2021-09-20 19:15:42,845:eu_debug:	
IN upload_file()

2021-09-20 19:15:42,845:eu_debug:	Attempting to generate new file upload credentials
2021-09-20 19:15:43,541:eu_debug:	Success: upload credentials for 'ENCFF626KWT' regenerated.
2021-09-20 19:15:43,541:eu_debug:	>>>>>>GET ENCFF626KWT From DCC with URL https://www.encodeproject.org/ENCFF626KWT/?format=json&datastore=database
2021-09-20 19:15:44,171:eu_debug:	Running command 'aws s3 cp guide_quantification_CTCF_FineMap_T6_BR1_counts.tsv s3://encode-files/2021/09/21/af4c1a4f-c706-4933-a96e-c1a8d3409e29/ENCFF626KWT.tsv'.
2021-09-20 19:15:45,305:eu_debug:	AWS upload successful.
2021-09-20 19:15:45,306:eu_debug:	
IN post().
2021-09-20 19:15:45,327:eu_debug:	<<<<<< POST file record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Guide_quantifications To DCC with URL https://www.encodeproject.org/file and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6_R2.Guide_quantifications"
  ],
  "award": "/awards/UM1HG009436/",
  "dataset": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6",
  "derived_from": [
    "will-greenleaf:K562_CRISPRk_CTCF-FineMap_T6-R1_T2.fastq.gz"
  ],
  "file_format": "tsv",
  "file_size": 6211466,
  "lab": "/labs/will-greenleaf/",
  "md5sum": "c076c067eab09bf45cba8e9bd8939f28",
  "output_type": "guide quantifications",
  "submitted_file_name": "guide_quantification_CTCF_FineMap_T6_BR2_counts.tsv"
}


2021-09-20 19:15:46,269:eu_debug:	Success.
2021-09-20 19:15:46,270:eu_debug:	
IN upload_file()

2021-09-20 19:15:46,270:eu_debug:	Attempting to generate new file upload credentials
2021-09-20 19:15:46,941:eu_debug:	Success: upload credentials for 'ENCFF776QOY' regenerated.
2021-09-20 19:15:46,941:eu_debug:	>>>>>>GET ENCFF776QOY From DCC with URL https://www.encodeproject.org/ENCFF776QOY/?format=json&datastore=database
2021-09-20 19:15:47,565:eu_debug:	Running command 'aws s3 cp guide_quantification_CTCF_FineMap_T6_BR2_counts.tsv s3://encode-files/2021/09/21/ff9cf059-8bde-4491-87cd-baddb27faadf/ENCFF776QOY.tsv'.
2021-09-20 19:15:48,724:eu_debug:	AWS upload successful.
2021-09-20 19:15:48,725:eu_debug:	
IN post().
2021-09-20 19:15:48,747:eu_debug:	<<<<<< POST file record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Guide_quantifications To DCC with URL https://www.encodeproject.org/file and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R1.Guide_quantifications"
  ],
  "award": "/awards/UM1HG009436/",
  "dataset": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20",
  "derived_from": [
    "will-greenleaf:K562_CRISPRk_CTCF-FineMap_T20-R1_T1.fastq.gz"
  ],
  "file_format": "tsv",
  "file_size": 6202194,
  "lab": "/labs/will-greenleaf/",
  "md5sum": "a05fb77f740f5df92210b85821bb7180",
  "output_type": "guide quantifications",
  "submitted_file_name": "guide_quantification_CTCF_FineMap_T20_BR1_counts.tsv"
}


2021-09-20 19:15:49,439:eu_debug:	Success.
2021-09-20 19:15:49,440:eu_debug:	
IN upload_file()

2021-09-20 19:15:49,440:eu_debug:	Attempting to generate new file upload credentials
2021-09-20 19:15:50,168:eu_debug:	Success: upload credentials for 'ENCFF660DWF' regenerated.
2021-09-20 19:15:50,169:eu_debug:	>>>>>>GET ENCFF660DWF From DCC with URL https://www.encodeproject.org/ENCFF660DWF/?format=json&datastore=database
2021-09-20 19:15:50,786:eu_debug:	Running command 'aws s3 cp guide_quantification_CTCF_FineMap_T20_BR1_counts.tsv s3://encode-files/2021/09/21/3cf64e2a-3b97-4316-98ca-379f4755dead/ENCFF660DWF.tsv'.
2021-09-20 19:15:51,955:eu_debug:	AWS upload successful.
2021-09-20 19:15:51,957:eu_debug:	
IN post().
2021-09-20 19:15:51,979:eu_debug:	<<<<<< POST file record will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Guide_quantifications To DCC with URL https://www.encodeproject.org/file and this payload:

{
  "aliases": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20_R2.Guide_quantifications"
  ],
  "award": "/awards/UM1HG009436/",
  "dataset": "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20",
  "derived_from": [
    "will-greenleaf:K562_CRISPRk_CTCF-FineMap_T20-R1_T2.fastq.gz"
  ],
  "file_format": "tsv",
  "file_size": 6205331,
  "lab": "/labs/will-greenleaf/",
  "md5sum": "c2c7d59f6b73c4409ed05393a6f9bdac",
  "output_type": "guide quantifications",
  "submitted_file_name": "guide_quantification_CTCF_FineMap_T20_BR2_counts.tsv"
}


2021-09-20 19:15:52,669:eu_debug:	Success.
2021-09-20 19:15:52,670:eu_debug:	
IN upload_file()

2021-09-20 19:15:52,670:eu_debug:	Attempting to generate new file upload credentials
2021-09-20 19:15:53,694:eu_debug:	Success: upload credentials for 'ENCFF747DTP' regenerated.
2021-09-20 19:15:53,694:eu_debug:	>>>>>>GET ENCFF747DTP From DCC with URL https://www.encodeproject.org/ENCFF747DTP/?format=json&datastore=database
2021-09-20 19:15:54,614:eu_debug:	Running command 'aws s3 cp guide_quantification_CTCF_FineMap_T20_BR2_counts.tsv s3://encode-files/2021/09/21/edc76e8a-1600-415b-bc2b-d4b9f978c419/ENCFF747DTP.tsv'.
2021-09-20 19:15:55,751:eu_debug:	AWS upload successful.
2021-09-20 19:16:02,227:eu_debug:	submission=False: In non-submission mode.
2021-09-20 19:17:01,716:eu_debug:	submission=True: In submission mode.
2021-09-20 19:17:02,313:eu_debug:	
IN post().
2021-09-20 19:17:02,313:eu_debug:	<<<<<< POST functional_characterization_series record will-greenleaf:CRISPRk_CTCF_FineMap To DCC with URL https://www.encodeproject.org/functional_characterization_series and this payload:

{
  "aliases": [
    "will-greenleaf:CRISPRk_CTCF_FineMap"
  ],
  "award": "/awards/UM1HG009436/",
  "description": "Functional characterization series for Cas9/CRISPR fine-mapping proliferation screens at CTCF motifs around essential genes",
  "lab": "/labs/will-greenleaf/",
  "related_datasets": [
    "will-greenleaf:K562_CRISPRi_CTCF_Growth_T7",
    "will-greenleaf:K562_CRISPRi_CTCF_Growth_T21"
  ]
}


2021-09-20 19:17:02,706:eu_debug:	Success.
2021-10-26 12:59:08,657:eu_debug:	submission=False: In non-submission mode.
2021-10-26 12:59:08,680:eu_debug:	WARNING: API keys () not set, all functions have no permission
2021-10-26 12:59:08,973:eu_debug:	submission=True: In submission mode.
2021-10-26 12:59:09,527:eu_debug:	
IN patch()
2021-10-26 12:59:09,528:eu_debug:	>>>>>>GET will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6 From DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6/?format=json&datastore=database&frame=edit
2021-10-26 12:59:35,808:eu_debug:	submission=False: In non-submission mode.
2021-10-26 12:59:36,211:eu_debug:	submission=True: In submission mode.
2021-10-26 12:59:36,735:eu_debug:	
IN patch()
2021-10-26 12:59:36,735:eu_debug:	>>>>>>GET will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6 From DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6/?format=json&datastore=database&frame=edit
2021-10-26 12:59:36,877:eu_debug:	<<<<<< PATCHING will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6 To DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6 and this payload:

{
  "description": "Functional characterization experiment for Cas9/CRISPR fine-mapping proliferation screens at hit and non-hit CTCF motifs in loop anchors (and their partner anchors) from the CTCF growth screen"
}


2021-10-26 12:59:37,631:eu_debug:	Success.
2021-10-26 12:59:37,632:eu_debug:	
IN patch()
2021-10-26 12:59:37,632:eu_debug:	>>>>>>GET will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20 From DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20/?format=json&datastore=database&frame=edit
2021-10-26 12:59:37,755:eu_debug:	<<<<<< PATCHING will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20 To DCC with URL https://www.encodeproject.org/will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20 and this payload:

{
  "description": "Functional characterization experiment for Cas9/CRISPR fine-mapping proliferation screens at hit and non-hit CTCF motifs in loop anchors (and their partner anchors) from the CTCF growth screen"
}


2021-10-26 12:59:38,176:eu_debug:	Success.
2021-10-26 13:00:04,239:eu_debug:	submission=False: In non-submission mode.
2021-10-26 13:00:04,676:eu_debug:	submission=True: In submission mode.
2021-10-26 13:00:23,461:eu_debug:	submission=False: In non-submission mode.
2021-10-26 13:00:23,940:eu_debug:	submission=True: In submission mode.
2021-10-26 13:00:42,681:eu_debug:	submission=False: In non-submission mode.
2021-10-26 13:00:43,079:eu_debug:	submission=True: In submission mode.
2021-10-26 13:00:43,599:eu_debug:	
IN patch()
2021-10-26 13:00:43,599:eu_debug:	>>>>>>GET will-greenleaf:CRISPRk_CTCF_FineMap From DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPRk_CTCF_FineMap/?format=json&datastore=database&frame=edit
2021-10-26 13:00:43,720:eu_debug:	<<<<<< PATCHING will-greenleaf:CRISPRk_CTCF_FineMap To DCC with URL https://www.encodeproject.org/will-greenleaf:CRISPRk_CTCF_FineMap and this payload:

{
  "description": "Functional characterization series for Cas9/CRISPR fine-mapping proliferation screens at hit and non-hit CTCF motifs in loop anchors (and their partner anchors) from the CTCF growth screen",
  "related_datasets": [
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T6",
    "will-greenleaf:K562_CRISPRk_CTCF_FineMap_T20",
    "/functional-characterization-experiments/ENCSR371TIR/",
    "/functional-characterization-experiments/ENCSR223KWN/"
  ]
}


2021-10-26 13:00:44,322:eu_debug:	Success.