p-value: | 1e-6 |
log p-value: | -1.605e+01 |
Information Content per bp: | 1.842 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.52% |
Number of Background Sequences with motif | 5.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 24.0 +/- 10.8bp |
Average Position of motif in Background | 11.6 +/- 8.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0107.1_RELA/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AATRGARTTTCC --GGGAATTTCC |
|
|
|
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AATRGARTTTCC --GGGAATTTCC |
|
|
|
MA0105.3_NFKB1/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AATRGARTTTCC- --GGGAATTTCCC |
|
|
|
PB0135.1_Hoxa3_2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AATRGARTTTCC CCTTAATNGNTTTT-- |
|
|
|
MA0101.1_REL/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AATRGARTTTCC --GGGGATTTCC |
|
|
|
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AATRGARTTTCC- -NGGGGATTTCCC |
|
|
|
PB0115.1_Ehf_2/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AATRGARTTTCC------ --TAGTATTTCCGATCTT |
|
|
|
MA0136.1_ELF5/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AATRGARTTTCC-- -----TACTTCCTT |
|
|
|
GFY(?)/Promoter/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AATRGARTTTCC ACTACAATTCCC |
|
|
|
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AATRGARTTTCC---- ------ACTTCCTGBT |
|
|
|