Information for 13-TCAATTCMAYTC (Motif 12)


Reverse Opposite:

p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets18.0 +/- 9.5bp
Average Position of motif in Background18.7 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCAATTCMAYTC--
AATCAATTCAATAATT

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAATTCMAYTC--
TNGAATTTCATTNAN

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCAATTCMAYTC
ATAAACAATTAAACA-

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCAATTCMAYTC
NNNNTGAATTCANNNC

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCAATTCMAYTC
-CACTTCCTCT-

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCAATTCMAYTC
GTTTCACTTCCG---

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCAATTCMAYTC-
-CACTTCCYCTTT

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCAATTCMAYTC----
NNAGTCCCACTCNNNN

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCAATTCMAYTC
TAATCAATTA-----

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCAATTCMAYTC
-GCATTCCAGN-