invivo_E123_sequence.chipseq_output_CTCF Bal Acc: 0.892 auROC: 0.957 auPRC: 0.960 F1: 0.885 Re@0.25 FDR: 0.962 Re@0.10 FDR: 0.884 Re@0.05 FDR: 0.796 Positive Accuracy: 0.849 (2372/2794) Negative Accuracy: 0.935 (2780/2973) invivo_E123_sequence.chipseq_output_MAX Bal Acc: 0.781 auROC: 0.882 auPRC: 0.941 F1: 0.861 Re@0.25 FDR: 0.977 Re@0.10 FDR: 0.790 Re@0.05 FDR: 0.648 Positive Accuracy: 0.859 (2984/3474) Negative Accuracy: 0.704 (1125/1598) invivo_E123_sequence.output_CTCF Bal Acc: 0.802 auROC: 0.881 auPRC: 0.884 F1: 0.779 Re@0.25 FDR: 0.863 Re@0.10 FDR: 0.605 Re@0.05 FDR: 0.411 Positive Accuracy: 0.707 (1975/2794) Negative Accuracy: 0.898 (2670/2973) invivo_E123_sequence.output_MAX Bal Acc: 0.500 auROC: 0.504 auPRC: 0.841 F1: 0.813 Re@0.25 FDR: 0.000 Re@0.10 FDR: 0.000 Re@0.05 FDR: 0.000 Positive Accuracy: 1.000 (3474/3474) Negative Accuracy: 0.000 (0/1598) 8x 9 BP convolution -> 8x 32 BP convolutions Epoch 23/200 val_loss: 0.299390120666 In-vitro weight is 0.31 invitro_CTCF_T044268_1.02_371.output Bal Acc: 0.828 auROC: 0.881 auPRC: 0.912 F1: 0.811 Re@0.25 FDR: 0.831 Re@0.10 FDR: 0.738 Re@0.05 FDR: 0.690 Positive Accuracy: 0.738 (3678/4985) Negative Accuracy: 0.919 (4608/5015) invitro_MAX_T011266_1.02_441.output Bal Acc: 0.898 auROC: 0.934 auPRC: 0.955 F1: 0.890 Re@0.25 FDR: 0.913 Re@0.10 FDR: 0.854 Re@0.05 FDR: 0.831 Positive Accuracy: 0.824 (4126/5009) Negative Accuracy: 0.973 (4855/4991) invivo_E123_sequence.chipseq_output_CTCF Bal Acc: 0.887 auROC: 0.956 auPRC: 0.961 F1: 0.879 Re@0.25 FDR: 0.955 Re@0.10 FDR: 0.870 Re@0.05 FDR: 0.796 Positive Accuracy: 0.839 (2343/2794) Negative Accuracy: 0.935 (2780/2973) invivo_E123_sequence.chipseq_output_MAX Bal Acc: 0.815 auROC: 0.899 auPRC: 0.949 F1: 0.875 Re@0.25 FDR: 0.986 Re@0.10 FDR: 0.843 Re@0.05 FDR: 0.680 Positive Accuracy: 0.860 (2989/3474) Negative Accuracy: 0.769 (1229/1598) invivo_E123_sequence.output_CTCF Bal Acc: 0.865 auROC: 0.962 auPRC: 0.964 F1: 0.847 Re@0.25 FDR: 0.967 Re@0.10 FDR: 0.892 Re@0.05 FDR: 0.828 Positive Accuracy: 0.746 (2085/2794) Negative Accuracy: 0.984 (2926/2973) invivo_E123_sequence.output_MAX Bal Acc: 0.830 auROC: 0.910 auPRC: 0.957 F1: 0.877 Re@0.25 FDR: 0.985 Re@0.10 FDR: 0.856 Re@0.05 FDR: 0.748 Positive Accuracy: 0.847 (2944/3474) Negative Accuracy: 0.813 (1299/1598) 8x 9 BP convolution Epoch 52/200 90000/90000 [==============================] - 34s - loss: 0.3328 val_loss: 0.330401001456 In-vitro weight is 0.25 invitro_CTCF_T044268_1.02_371.output Bal Acc: 0.835 auROC: 0.888 auPRC: 0.917 F1: 0.817 Re@0.25 FDR: 0.840 Re@0.10 FDR: 0.748 Re@0.05 FDR: 0.703 Positive Accuracy: 0.734 (3660/4985) Negative Accuracy: 0.936 (4695/5015) invitro_MAX_T011266_1.02_441.output Bal Acc: 0.901 auROC: 0.935 auPRC: 0.956 F1: 0.892 Re@0.25 FDR: 0.914 Re@0.10 FDR: 0.866 Re@0.05 FDR: 0.839 Positive Accuracy: 0.819 (4102/5009) Negative Accuracy: 0.982 (4903/4991) invivo_E123_sequence.chipseq_output_CTCF Bal Acc: 0.735 auROC: 0.801 auPRC: 0.790 F1: 0.710 Re@0.25 FDR: 0.694 Re@0.10 FDR: 0.204 Re@0.05 FDR: 0.028 Positive Accuracy: 0.664 (1855/2794) Negative Accuracy: 0.807 (2399/2973) invivo_E123_sequence.chipseq_output_MAX Bal Acc: 0.760 auROC: 0.886 auPRC: 0.944 F1: 0.867 Re@0.25 FDR: 0.985 Re@0.10 FDR: 0.790 Re@0.05 FDR: 0.641 Positive Accuracy: 0.900 (3127/3474) Negative Accuracy: 0.619 (989/1598) invivo_E123_sequence.output_CTCF Bal Acc: 0.842 auROC: 0.921 auPRC: 0.922 F1: 0.826 Re@0.25 FDR: 0.916 Re@0.10 FDR: 0.768 Re@0.05 FDR: 0.619 Positive Accuracy: 0.761 (2125/2794) Negative Accuracy: 0.924 (2748/2973) invivo_E123_sequence.output_MAX Bal Acc: 0.832 auROC: 0.914 auPRC: 0.957 F1: 0.884 Re@0.25 FDR: 0.988 Re@0.10 FDR: 0.875 Re@0.05 FDR: 0.746 Positive Accuracy: 0.866 (3008/3474) Negative Accuracy: 0.798 (1276/1598) 8x 15 BP convolution Epoch 67/200 90000/90000 [==============================] - 34s - loss: 0.2691 val_loss: 0.268272044881 In-vitro weight is 0.24 invitro_CTCF_T044268_1.02_371.output Bal Acc: 0.833 auROC: 0.887 auPRC: 0.917 F1: 0.817 Re@0.25 FDR: 0.839 Re@0.10 FDR: 0.748 Re@0.05 FDR: 0.707 Positive Accuracy: 0.746 (3720/4985) Negative Accuracy: 0.919 (4611/5015) invitro_MAX_T011266_1.02_441.output Bal Acc: 0.908 auROC: 0.943 auPRC: 0.960 F1: 0.903 Re@0.25 FDR: 0.929 Re@0.10 FDR: 0.885 Re@0.05 FDR: 0.860 Positive Accuracy: 0.849 (4253/5009) Negative Accuracy: 0.968 (4829/4991) invivo_E123_sequence.chipseq_output_CTCF Bal Acc: 0.871 auROC: 0.942 auPRC: 0.945 F1: 0.867 Re@0.25 FDR: 0.943 Re@0.10 FDR: 0.832 Re@0.05 FDR: 0.712 Positive Accuracy: 0.861 (2405/2794) Negative Accuracy: 0.882 (2621/2973) invivo_E123_sequence.chipseq_output_MAX Bal Acc: 0.778 auROC: 0.895 auPRC: 0.947 F1: 0.875 Re@0.25 FDR: 0.983 Re@0.10 FDR: 0.824 Re@0.05 FDR: 0.701 Positive Accuracy: 0.901 (3129/3474) Negative Accuracy: 0.655 (1046/1598) invivo_E123_sequence.output_CTCF Bal Acc: 0.877 auROC: 0.952 auPRC: 0.955 F1: 0.865 Re@0.25 FDR: 0.958 Re@0.10 FDR: 0.871 Re@0.05 FDR: 0.787 Positive Accuracy: 0.798 (2231/2794) Negative Accuracy: 0.956 (2841/2973) invivo_E123_sequence.output_MAX Bal Acc: 0.837 auROC: 0.916 auPRC: 0.958 F1: 0.888 Re@0.25 FDR: 0.991 Re@0.10 FDR: 0.881 Re@0.05 FDR: 0.750 Positive Accuracy: 0.870 (3022/3474) Negative Accuracy: 0.804 (1284/1598) 8x 32 BP convolution Epoch 124/200 90000/90000 [==============================] - 25s - loss: 0.1988 val_loss: 0.208443625587 invivo_E123_sequence.chipseq_output_CTCF Bal Acc: 0.895 auROC: 0.957 auPRC: 0.959 F1: 0.889 Re@0.25 FDR: 0.957 Re@0.10 FDR: 0.878 Re@0.05 FDR: 0.814 Positive Accuracy: 0.867 (2422/2794) Negative Accuracy: 0.922 (2742/2973) invivo_E123_sequence.chipseq_output_MAX Bal Acc: 0.795 auROC: 0.903 auPRC: 0.951 F1: 0.880 Re@0.25 FDR: 0.986 Re@0.10 FDR: 0.849 Re@0.05 FDR: 0.687 Positive Accuracy: 0.896 (3111/3474) Negative Accuracy: 0.695 (1111/1598) invivo_E123_sequence.output_CTCF Bal Acc: 0.892 auROC: 0.959 auPRC: 0.961 F1: 0.883 Re@0.25 FDR: 0.962 Re@0.10 FDR: 0.897 Re@0.05 FDR: 0.821 Positive Accuracy: 0.826 (2307/2794) Negative Accuracy: 0.958 (2849/2973) invivo_E123_sequence.output_MAX Bal Acc: 0.832 auROC: 0.915 auPRC: 0.956 F1: 0.883 Re@0.25 FDR: 0.991 Re@0.10 FDR: 0.866 Re@0.05 FDR: 0.757 Positive Accuracy: 0.863 (2999/3474) Negative Accuracy: 0.800 (1278/1598) Plot run #1 (8x 16bp conv) Epoch 10/10 90000/90000 [==============================] - 34s - loss: 0.3290 val_loss: 0.324441485055 In-vitro weight is 0.42 invitro_CTCF_T044268_1.02_371.output Bal Acc: 0.830 auROC: 0.885 auPRC: 0.916 F1: 0.813 Re@0.25 FDR: 0.835 Re@0.10 FDR: 0.743 Re@0.05 FDR: 0.705 Positive Accuracy: 0.740 (3687/4985) Negative Accuracy: 0.920 (4616/5015) invitro_MAX_T011266_1.02_441.output Bal Acc: 0.905 auROC: 0.941 auPRC: 0.958 F1: 0.899 Re@0.25 FDR: 0.926 Re@0.10 FDR: 0.881 Re@0.05 FDR: 0.855 Positive Accuracy: 0.846 (4237/5009) Negative Accuracy: 0.964 (4813/4991) invivo_E123_sequence.chipseq_output_CTCF Bal Acc: 0.869 auROC: 0.942 auPRC: 0.945 F1: 0.864 Re@0.25 FDR: 0.946 Re@0.10 FDR: 0.812 Re@0.05 FDR: 0.714 Positive Accuracy: 0.855 (2388/2794) Negative Accuracy: 0.884 (2628/2973) invivo_E123_sequence.chipseq_output_MAX Bal Acc: 0.758 auROC: 0.874 auPRC: 0.937 F1: 0.855 Re@0.25 FDR: 0.972 Re@0.10 FDR: 0.761 Re@0.05 FDR: 0.636 Positive Accuracy: 0.869 (3018/3474) Negative Accuracy: 0.647 (1034/1598) invivo_E123_sequence.output_CTCF Bal Acc: 0.875 auROC: 0.955 auPRC: 0.955 F1: 0.862 Re@0.25 FDR: 0.962 Re@0.10 FDR: 0.883 Re@0.05 FDR: 0.783 Positive Accuracy: 0.790 (2208/2794) Negative Accuracy: 0.960 (2853/2973) invivo_E123_sequence.output_MAX Bal Acc: 0.811 auROC: 0.896 auPRC: 0.949 F1: 0.868 Re@0.25 FDR: 0.983 Re@0.10 FDR: 0.835 Re@0.05 FDR: 0.687 Positive Accuracy: 0.845 (2936/3474) Negative Accuracy: 0.777 (1242/1598) Plot run #2 (1x 16bp conv) Epoch 10/10 90000/90000 [==============================] - 26s - loss: 0.4430 val_loss: 0.438839405614 In-vitro weight is 0.42 invitro_CTCF_T044268_1.02_371.output Bal Acc: 0.781 auROC: 0.841 auPRC: 0.872 F1: 0.765 Re@0.25 FDR: 0.769 Re@0.10 FDR: 0.628 Re@0.05 FDR: 0.498 Positive Accuracy: 0.717 (3573/4985) Negative Accuracy: 0.845 (4237/5015) invitro_MAX_T011266_1.02_441.output Bal Acc: 0.805 auROC: 0.864 auPRC: 0.889 F1: 0.794 Re@0.25 FDR: 0.832 Re@0.10 FDR: 0.665 Re@0.05 FDR: 0.491 Positive Accuracy: 0.752 (3769/5009) Negative Accuracy: 0.857 (4278/4991) invivo_E123_sequence.chipseq_output_CTCF Bal Acc: 0.741 auROC: 0.834 auPRC: 0.825 F1: 0.692 Re@0.25 FDR: 0.753 Re@0.10 FDR: 0.377 Re@0.05 FDR: 0.111 Positive Accuracy: 0.590 (1648/2794) Negative Accuracy: 0.891 (2650/2973) invivo_E123_sequence.chipseq_output_MAX Bal Acc: 0.717 auROC: 0.870 auPRC: 0.934 F1: 0.859 Re@0.25 FDR: 0.970 Re@0.10 FDR: 0.775 Re@0.05 FDR: 0.597 Positive Accuracy: 0.923 (3207/3474) Negative Accuracy: 0.510 (815/1598) invivo_E123_sequence.output_CTCF Bal Acc: 0.832 auROC: 0.934 auPRC: 0.938 F1: 0.805 Re@0.25 FDR: 0.939 Re@0.10 FDR: 0.804 Re@0.05 FDR: 0.685 Positive Accuracy: 0.701 (1958/2794) Negative Accuracy: 0.963 (2862/2973) invivo_E123_sequence.output_MAX Bal Acc: 0.784 auROC: 0.881 auPRC: 0.942 F1: 0.863 Re@0.25 FDR: 0.974 Re@0.10 FDR: 0.793 Re@0.05 FDR: 0.659 Positive Accuracy: 0.860 (2987/3474) Negative Accuracy: 0.709 (1133/1598) Plot run #3 (2x 16bp convs) Epoch 20/20 90000/90000 [==============================] - 36s - loss: 0.3288 val_loss: 0.324400507635 In-vitro weight is 0.33 invitro_CTCF_T044268_1.02_371.output Bal Acc: 0.798 auROC: 0.864 auPRC: 0.899 F1: 0.786 Re@0.25 FDR: 0.798 Re@0.10 FDR: 0.708 Re@0.05 FDR: 0.672 Positive Accuracy: 0.743 (3706/4985) Negative Accuracy: 0.853 (4277/5015) invitro_MAX_T011266_1.02_441.output Bal Acc: 0.868 auROC: 0.897 auPRC: 0.928 F1: 0.859 Re@0.25 FDR: 0.865 Re@0.10 FDR: 0.816 Re@0.05 FDR: 0.786 Positive Accuracy: 0.808 (4049/5009) Negative Accuracy: 0.927 (4625/4991) invivo_E123_sequence.chipseq_output_CTCF Bal Acc: 0.877 auROC: 0.945 auPRC: 0.949 F1: 0.872 Re@0.25 FDR: 0.945 Re@0.10 FDR: 0.846 Re@0.05 FDR: 0.740 Positive Accuracy: 0.864 (2415/2794) Negative Accuracy: 0.889 (2643/2973) invivo_E123_sequence.chipseq_output_MAX Bal Acc: 0.742 auROC: 0.868 auPRC: 0.936 F1: 0.855 Re@0.25 FDR: 0.964 Re@0.10 FDR: 0.764 Re@0.05 FDR: 0.632 Positive Accuracy: 0.884 (3070/3474) Negative Accuracy: 0.599 (958/1598) invivo_E123_sequence.output_CTCF Bal Acc: 0.877 auROC: 0.954 auPRC: 0.956 F1: 0.864 Re@0.25 FDR: 0.958 Re@0.10 FDR: 0.874 Re@0.05 FDR: 0.796 Positive Accuracy: 0.789 (2205/2794) Negative Accuracy: 0.964 (2867/2973) invivo_E123_sequence.output_MAX Bal Acc: 0.788 auROC: 0.882 auPRC: 0.944 F1: 0.857 Re@0.25 FDR: 0.975 Re@0.10 FDR: 0.795 Re@0.05 FDR: 0.662 Positive Accuracy: 0.841 (2923/3474) Negative Accuracy: 0.735 (1174/1598)