# Parameters
data_name = "Zic5"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:53:50,095 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Zic5: Motif: M00780_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Zic5

Unique Cell types only TF-MoDISco finds Zic5: #2

Cell type	Modisco	Homer
ES;JM8.N4;Asynch;A;GEO	Pattern: metacluster_0/pattern_15 Significance: 0.025025	Absent
NRV;Eye-OPTC;A;CL	Pattern: metacluster_0/pattern_20 Significance: 0.026797199999999997	Absent

Unique Cell types only Homer finds Zic5: #1

Cell type	Modisco	Homer
iVIP_NRN;A;GEO	Absent	Pattern: motif23.motif Significance: 0.05140599999999999