# Parameters
data_name = "Rbpj"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:30:51,193 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Rbpj: Motif: M09021_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Rbpj

No Cell types only TF-MoDISco finds Rbpj

Unique Cell types only Homer finds Rbpj: #2

Cell type	Modisco	Homer
RTN;D1;D;En	Absent	Pattern: motif9.motif Significance: 0.0420579
WHL_BRN;8wks;D;GEO	Absent	Pattern: motif14.motif Significance: 0.00661792