# Parameters
data_name = "Pax2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:27:07,097 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Pax2: Motif: M02690_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Pax2

Unique Cell types only TF-MoDISco finds Pax2: #1

Cell type	Modisco	Homer
Melanotrope;A;GEO	Pattern: metacluster_0/pattern_11 Significance: 0.0107571	Absent

Unique Cell types only Homer finds Pax2: #4

Cell type	Modisco	Homer
ES;F1216;A;GEO	Absent	Pattern: motif19.motif Significance: 0.054432299999999996
wES;LVR;E11.5;D.;En	Absent	Pattern: motif9.motif Significance: 0.0407716
FBRBLST;8wks;D;En	Absent	Pattern: motif11.motif Significance: 0.051911599999999995
Hnd_BRN;P0;D;En	Absent	Pattern: motif16.motif Significance: 0.0599217