# Parameters
data_name = "Nr3c1"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:25:52,683 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Nr3c1: Motif: M05886_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Nr3c1: #1

Cell type	Modisco	Homer
MTR_NRN_MN1;methyl3;D;En	Pattern: metacluster_0/pattern_10 Significance: 0.00131766	Pattern: motif8.motif Significance: 0.0007947210000000001

Unique Cell types only TF-MoDISco finds Nr3c1: #4

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_22 Significance: 0.0470145	Absent
Adipose;D;En	Pattern: metacluster_0/pattern_18 Significance: 0.00227773 / Pattern: metacluster_0/pattern_19 Significance: 0.0555572	Absent
SKLTL_Muscle;8wks;D;En	Pattern: metacluster_1/pattern_18 Significance: 0.000758465	Absent
Muscle;A;CL	Pattern: metacluster_1/pattern_14 Significance: 0.000777885	Absent

No Cell types only Homer finds Nr3c1