# Parameters
data_name = "Nr1i2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:25:16,823 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Nr1i2: Motif: M09316_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Nr1i2

Unique Cell types only TF-MoDISco finds Nr1i2: #13

Cell type	Modisco	Homer
T_MLD;TCR_SV40-I_CD8+;D28;A;GEO	Pattern: metacluster_1/pattern_17 Significance: 0.037759	Absent
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_5 Significance: 0.025695099999999995	Absent
wES;posterior;1;E9.5;A;GEO	Pattern: metacluster_1/pattern_12 Significance: 0.0200673	Absent
wES;posterior;2;E9.5;A;GEO	Pattern: metacluster_0/pattern_8 Significance: 0.0287404	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.0326802	Absent
npES;posterior_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_13 Significance: 0.0580216	Absent
wES;Hnd_lmb;E11.5;D;En	Pattern: metacluster_0/pattern_22 Significance: 0.0163672	Absent
wES;MSDRM;E11.5;D;En	Pattern: metacluster_0/pattern_11 Significance: 0.0321268	Absent
T_LCMV;CD8+;D35;A;GEO	Pattern: metacluster_1/pattern_16 Significance: 0.0378582	Absent
Muscle;A;CL	Pattern: metacluster_1/pattern_21 Significance: 0.0367901	Absent
npES;3rd_Rhmbmr_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_15 Significance: 0.0252899	Absent
wES;3rd_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_14 Significance: 0.051988099999999995	Absent
npES;3rd_Rhmbmr_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_13 Significance: 0.050070300000000005	Absent

No Cell types only Homer finds Nr1i2