# Parameters
data_name = "Nr1h2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:25:04,805 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Nr1h2: Motif: M09620_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Nr1h2

Unique Cell types only TF-MoDISco finds Nr1h2: #3

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_5 Significance: 0.0287437	Absent
wES;posterior;2;E9.5;A;GEO	Pattern: metacluster_0/pattern_8 Significance: 0.0513874	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.041632800000000005	Absent

Unique Cell types only Homer finds Nr1h2: #1

Cell type	Modisco	Homer
DC_BMD;A;CL	Absent	Pattern: motif13.motif Significance: 0.026301299999999996