# Parameters
data_name = "Esr1"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:05:16,408 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Esr1: Motif: M09309_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Esr1

Unique Cell types only TF-MoDISco finds Esr1: #7

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_5 Significance: 0.0220088	Absent
wES;posterior;1;E9.5;A;GEO	Pattern: metacluster_1/pattern_12 Significance: 0.0183275	Absent
wES;posterior;2;E9.5;A;GEO	Pattern: metacluster_0/pattern_8 Significance: 0.0336245	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.00650542	Absent
SKLTL_Muscle;8wks;D;En	Pattern: metacluster_1/pattern_18 Significance: 0.00897542	Absent
MTR_NRN_MN1;methyl3;D;En	Pattern: metacluster_0/pattern_10 Significance: 0.0366315	Absent
Muscle;A;CL	Pattern: metacluster_1/pattern_14 Significance: 0.0106019	Absent

Unique Cell types only Homer finds Esr1: #1

Cell type	Modisco	Homer
eCortical_NRN;A;GEO	Absent	Pattern: motif17.motif Significance: 0.056702300000000004